HEADER SUGAR BINDING PROTEIN 24-JUL-12 4G9M TITLE CRYSTAL STRUCTURE OF THE RHIZOCTONIA SOLANI AGGLUTININ COMPND MOL_ID: 1; COMPND 2 MOLECULE: AGGLUTININ; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RHIZOCTONIA SOLANI; SOURCE 3 ORGANISM_TAXID: 456999 KEYWDS LECTIN, CARBOHYDRATE-BINDING SPECIFICITY, SUGAR BINDING PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR V.T.SKAMNAKI,A.L.KANTSADI,D.D.LEONIDAS REVDAT 3 13-SEP-23 4G9M 1 REMARK REVDAT 2 07-MAR-18 4G9M 1 REMARK REVDAT 1 05-JUN-13 4G9M 0 JRNL AUTH V.T.SKAMNAKI,W.J.PEUMANS,A.L.KANTSADI,M.A.CUBETA,K.PLAS, JRNL AUTH 2 S.PAKALA,S.E.ZOGRAPHOS,G.SMAGGHE,W.C.NIERMAN,E.J.VAN DAMME, JRNL AUTH 3 D.D.LEONIDAS JRNL TITL STRUCTURAL ANALYSIS OF THE RHIZOCTONIA SOLANI AGGLUTININ JRNL TITL 2 REVEALS A DOMAIN-SWAPPING DIMERIC ASSEMBLY. JRNL REF FEBS J. V. 280 1750 2013 JRNL REFN ISSN 1742-464X JRNL PMID 23402398 JRNL DOI 10.1111/FEBS.12190 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 20.73 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 86.4 REMARK 3 NUMBER OF REFLECTIONS : 27436 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.181 REMARK 3 FREE R VALUE : 0.232 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 1386 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 20.7353 - 3.4449 0.93 2861 158 0.1660 0.2034 REMARK 3 2 3.4449 - 2.7363 0.98 2946 165 0.1800 0.2386 REMARK 3 3 2.7363 - 2.3910 0.98 2983 144 0.1873 0.2691 REMARK 3 4 2.3910 - 2.1726 0.97 2912 157 0.1784 0.2029 REMARK 3 5 2.1726 - 2.0171 0.97 2928 150 0.1746 0.2453 REMARK 3 6 2.0171 - 1.8982 0.97 2894 149 0.1856 0.2544 REMARK 3 7 1.8982 - 1.8032 0.95 2845 151 0.2015 0.2544 REMARK 3 8 1.8032 - 1.7248 0.86 2572 144 0.2250 0.2906 REMARK 3 9 1.7248 - 1.6584 0.66 1989 107 0.2501 0.3026 REMARK 3 10 1.6584 - 1.6010 0.37 1120 61 0.2726 0.2667 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 0.90 REMARK 3 SHRINKAGE RADIUS : 0.60 REMARK 3 K_SOL : 0.44 REMARK 3 B_SOL : 80.94 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 24.880 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.05 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 4.32070 REMARK 3 B22 (A**2) : 1.45730 REMARK 3 B33 (A**2) : -5.77790 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 1.65490 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 2244 REMARK 3 ANGLE : 1.097 3065 REMARK 3 CHIRALITY : 0.081 348 REMARK 3 PLANARITY : 0.004 399 REMARK 3 DIHEDRAL : 12.422 800 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 1:26) REMARK 3 ORIGIN FOR THE GROUP (A): 39.9142 34.9036 2.0898 REMARK 3 T TENSOR REMARK 3 T11: 0.3408 T22: 0.1221 REMARK 3 T33: 0.2433 T12: -0.0670 REMARK 3 T13: 0.0467 T23: -0.0349 REMARK 3 L TENSOR REMARK 3 L11: 0.5730 L22: 0.0873 REMARK 3 L33: 0.7439 L12: 0.1709 REMARK 3 L13: -0.5293 L23: -0.0370 REMARK 3 S TENSOR REMARK 3 S11: -0.4809 S12: 0.2905 S13: -0.2357 REMARK 3 S21: -0.2539 S22: 0.1893 S23: 0.1635 REMARK 3 S31: 0.5150 S32: -0.3661 S33: -0.0119 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 27:103) REMARK 3 ORIGIN FOR THE GROUP (A): 41.2527 32.0403 10.8552 REMARK 3 T TENSOR REMARK 3 T11: 0.2073 T22: 0.1467 REMARK 3 T33: 0.2034 T12: 0.0228 REMARK 3 T13: 0.0322 T23: 0.0482 REMARK 3 L TENSOR REMARK 3 L11: 1.0714 L22: 1.4378 REMARK 3 L33: 1.2393 L12: 0.4546 REMARK 3 L13: -1.3076 L23: -0.3318 REMARK 3 S TENSOR REMARK 3 S11: -0.1677 S12: -0.2170 S13: -0.2633 REMARK 3 S21: -0.0750 S22: -0.1178 S23: -0.2372 REMARK 3 S31: 0.2377 S32: 0.2090 S33: -0.0200 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 104:116) REMARK 3 ORIGIN FOR THE GROUP (A): 52.2727 34.7335 11.4085 REMARK 3 T TENSOR REMARK 3 T11: 0.1804 T22: 0.4977 REMARK 3 T33: 0.2811 T12: 0.0559 REMARK 3 T13: -0.0045 T23: 0.0606 REMARK 3 L TENSOR REMARK 3 L11: 0.6108 L22: 1.9657 REMARK 3 L33: 0.9770 L12: 1.0393 REMARK 3 L13: -0.6355 L23: -0.9750 REMARK 3 S TENSOR REMARK 3 S11: -0.2175 S12: -1.0213 S13: -0.5155 REMARK 3 S21: -0.1696 S22: -0.0293 S23: -0.9384 REMARK 3 S31: 0.1195 S32: 0.7028 S33: -0.2148 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESSEQ 117:142) REMARK 3 ORIGIN FOR THE GROUP (A): 49.1063 33.7338 3.6116 REMARK 3 T TENSOR REMARK 3 T11: 0.2591 T22: 0.1989 REMARK 3 T33: 0.2781 T12: 0.0106 REMARK 3 T13: 0.0975 T23: 0.0143 REMARK 3 L TENSOR REMARK 3 L11: 0.5816 L22: 0.5045 REMARK 3 L33: 0.4057 L12: -0.0169 REMARK 3 L13: -0.3476 L23: 0.2604 REMARK 3 S TENSOR REMARK 3 S11: -0.2127 S12: 0.0906 S13: -0.3046 REMARK 3 S21: -0.6038 S22: 0.0711 S23: -0.1966 REMARK 3 S31: 0.2292 S32: -0.0080 S33: -0.0354 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 1:14) REMARK 3 ORIGIN FOR THE GROUP (A): 40.7310 54.4448 2.4618 REMARK 3 T TENSOR REMARK 3 T11: 0.2175 T22: 0.2475 REMARK 3 T33: 0.1409 T12: -0.0353 REMARK 3 T13: -0.0008 T23: -0.0139 REMARK 3 L TENSOR REMARK 3 L11: 0.1313 L22: 0.1166 REMARK 3 L33: 0.0305 L12: -0.1779 REMARK 3 L13: -0.0574 L23: 0.0013 REMARK 3 S TENSOR REMARK 3 S11: -0.0370 S12: 0.2375 S13: 0.1461 REMARK 3 S21: -0.2817 S22: -0.0622 S23: 0.0856 REMARK 3 S31: 0.0526 S32: -0.5326 S33: 0.0127 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 15:26) REMARK 3 ORIGIN FOR THE GROUP (A): 40.6367 68.5518 12.1880 REMARK 3 T TENSOR REMARK 3 T11: 0.2165 T22: 0.1462 REMARK 3 T33: 0.2083 T12: -0.0069 REMARK 3 T13: 0.0015 T23: -0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.1202 L22: 0.0391 REMARK 3 L33: 0.0639 L12: -0.0980 REMARK 3 L13: -0.0357 L23: -0.0247 REMARK 3 S TENSOR REMARK 3 S11: 0.1707 S12: 0.0167 S13: 0.4926 REMARK 3 S21: 0.2645 S22: 0.0209 S23: 0.2536 REMARK 3 S31: -0.2757 S32: -0.0848 S33: -0.0002 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 27:42) REMARK 3 ORIGIN FOR THE GROUP (A): 44.5819 71.5931 10.7422 REMARK 3 T TENSOR REMARK 3 T11: 0.1788 T22: 0.1937 REMARK 3 T33: 0.1895 T12: 0.0101 REMARK 3 T13: -0.0223 T23: 0.0210 REMARK 3 L TENSOR REMARK 3 L11: 0.0656 L22: 0.1809 REMARK 3 L33: 0.1186 L12: 0.1216 REMARK 3 L13: -0.0994 L23: -0.1285 REMARK 3 S TENSOR REMARK 3 S11: 0.0145 S12: 0.0609 S13: 0.4083 REMARK 3 S21: -0.0170 S22: 0.0556 S23: 0.0452 REMARK 3 S31: -0.1963 S32: -0.0995 S33: 0.0001 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 43:51) REMARK 3 ORIGIN FOR THE GROUP (A): 47.0331 62.4885 3.2852 REMARK 3 T TENSOR REMARK 3 T11: 0.2004 T22: 0.2033 REMARK 3 T33: 0.1811 T12: 0.0195 REMARK 3 T13: 0.0010 T23: 0.0283 REMARK 3 L TENSOR REMARK 3 L11: 0.0316 L22: 0.0619 REMARK 3 L33: -0.0080 L12: -0.0735 REMARK 3 L13: -0.0008 L23: 0.0302 REMARK 3 S TENSOR REMARK 3 S11: 0.2378 S12: 0.1409 S13: -0.0028 REMARK 3 S21: -0.4841 S22: -0.1183 S23: -0.0427 REMARK 3 S31: -0.1150 S32: -0.1438 S33: 0.0002 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 52:71) REMARK 3 ORIGIN FOR THE GROUP (A): 53.2423 60.0484 7.0509 REMARK 3 T TENSOR REMARK 3 T11: 0.1837 T22: 0.1565 REMARK 3 T33: 0.1723 T12: 0.0035 REMARK 3 T13: -0.0089 T23: 0.0216 REMARK 3 L TENSOR REMARK 3 L11: 0.2091 L22: 0.0684 REMARK 3 L33: 0.0376 L12: 0.0528 REMARK 3 L13: -0.0553 L23: -0.1011 REMARK 3 S TENSOR REMARK 3 S11: -0.0252 S12: 0.0296 S13: -0.0061 REMARK 3 S21: -0.0505 S22: -0.0368 S23: 0.0790 REMARK 3 S31: -0.1441 S32: 0.0531 S33: 0.0000 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 72:80) REMARK 3 ORIGIN FOR THE GROUP (A): 52.6246 62.3410 24.2917 REMARK 3 T TENSOR REMARK 3 T11: 0.1577 T22: 0.3031 REMARK 3 T33: 0.1443 T12: -0.0061 REMARK 3 T13: -0.0248 T23: 0.0170 REMARK 3 L TENSOR REMARK 3 L11: 0.4316 L22: 0.3652 REMARK 3 L33: 0.1555 L12: -0.3564 REMARK 3 L13: -0.2670 L23: 0.1628 REMARK 3 S TENSOR REMARK 3 S11: 0.2680 S12: -0.4760 S13: 0.1656 REMARK 3 S21: 0.3062 S22: -0.1904 S23: -0.2618 REMARK 3 S31: -0.2010 S32: -0.1240 S33: 0.0150 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 81:103) REMARK 3 ORIGIN FOR THE GROUP (A): 47.4632 55.6140 12.8938 REMARK 3 T TENSOR REMARK 3 T11: 0.1407 T22: 0.1899 REMARK 3 T33: 0.1823 T12: -0.0083 REMARK 3 T13: -0.0083 T23: -0.0099 REMARK 3 L TENSOR REMARK 3 L11: 0.0132 L22: 0.0863 REMARK 3 L33: 0.0353 L12: 0.1922 REMARK 3 L13: -0.0937 L23: -0.1770 REMARK 3 S TENSOR REMARK 3 S11: 0.0113 S12: -0.0069 S13: -0.0815 REMARK 3 S21: 0.0308 S22: -0.0731 S23: -0.0916 REMARK 3 S31: -0.0210 S32: -0.0298 S33: 0.0000 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 104:116) REMARK 3 ORIGIN FOR THE GROUP (A): 46.4939 56.8449 20.5886 REMARK 3 T TENSOR REMARK 3 T11: 0.2167 T22: 0.2232 REMARK 3 T33: 0.1735 T12: 0.0138 REMARK 3 T13: -0.0116 T23: 0.0142 REMARK 3 L TENSOR REMARK 3 L11: 0.2300 L22: 0.1561 REMARK 3 L33: 0.2658 L12: 0.1361 REMARK 3 L13: 0.0799 L23: -0.1347 REMARK 3 S TENSOR REMARK 3 S11: -0.0502 S12: 0.1926 S13: -0.0445 REMARK 3 S21: 0.1781 S22: -0.1474 S23: -0.0289 REMARK 3 S31: -0.1039 S32: -0.0416 S33: -0.0003 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 117:136) REMARK 3 ORIGIN FOR THE GROUP (A): 40.1081 60.9291 20.4384 REMARK 3 T TENSOR REMARK 3 T11: 0.1507 T22: 0.1982 REMARK 3 T33: 0.1548 T12: 0.0059 REMARK 3 T13: -0.0297 T23: -0.0136 REMARK 3 L TENSOR REMARK 3 L11: 0.0738 L22: 0.1514 REMARK 3 L33: 0.3560 L12: -0.0886 REMARK 3 L13: -0.1523 L23: 0.1140 REMARK 3 S TENSOR REMARK 3 S11: -0.0770 S12: -0.0856 S13: 0.1036 REMARK 3 S21: 0.0682 S22: 0.0826 S23: 0.0619 REMARK 3 S31: -0.0082 S32: -0.1546 S33: 0.0000 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESSEQ 137:143) REMARK 3 ORIGIN FOR THE GROUP (A): 38.8990 58.1063 3.3828 REMARK 3 T TENSOR REMARK 3 T11: 0.1963 T22: 0.2345 REMARK 3 T33: 0.1499 T12: -0.0017 REMARK 3 T13: -0.0166 T23: 0.0058 REMARK 3 L TENSOR REMARK 3 L11: 0.1265 L22: 0.0067 REMARK 3 L33: 0.0073 L12: 0.0882 REMARK 3 L13: -0.0228 L23: -0.0065 REMARK 3 S TENSOR REMARK 3 S11: 0.0287 S12: 0.1293 S13: -0.0358 REMARK 3 S21: -0.1621 S22: -0.0986 S23: -0.1221 REMARK 3 S31: 0.3971 S32: -0.0458 S33: -0.0001 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4G9M COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 02-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000073911. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 20-OCT-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.03954 REMARK 200 MONOCHROMATOR : BENT SI(111) CRYSTAL, REMARK 200 HORIZONTALLY FOCUSING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27436 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 20.734 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 86.4 REMARK 200 DATA REDUNDANCY : 14.63 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.09000 REMARK 200 FOR THE DATA SET : 4.9000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.66 REMARK 200 COMPLETENESS FOR SHELL (%) : 37.5 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.34200 REMARK 200 FOR SHELL : 1.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MRBUMP REMARK 200 STARTING MODEL: PDB ENTRY 2X2S REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 37.57 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.97 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M SODIUM ACETATE, PH 4.2, 20% V/V REMARK 280 PEG8000, 0.2 M SODIUM CHLORIDE, 10 MM SODIUM CITRATE, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 60.98950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 30.54550 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 60.98950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 30.54550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2310 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11580 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -13.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 143 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA B 1 O HOH B 347 2.00 REMARK 500 O HOH A 230 O HOH A 265 2.09 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 25 7.47 49.15 REMARK 500 SER A 73 -155.04 -146.09 REMARK 500 GLU A 115 25.36 49.98 REMARK 500 ARG B 25 9.81 58.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4G9N RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE RHIZOCTONIA SOLANI AGGLUTININ IN COMPLEX REMARK 900 WITH N'-ACETYL-GALACTOSAMINE DBREF 4G9M A 1 143 PDB 4G9M 4G9M 1 143 DBREF 4G9M B 1 143 PDB 4G9M 4G9M 1 143 SEQRES 1 A 143 ALA PRO ILE SER LEU PRO ALA GLY THR TYR THR LEU LYS SEQRES 2 A 143 ASN VAL SER THR GLY THR VAL LEU ASP LEU TRP ARG GLY SEQRES 3 A 143 GLU ALA ALA GLU GLY THR ALA ILE GLN GLY TYR LYS SER SEQRES 4 A 143 HIS GLY GLY ASP ASN GLN LYS TRP ARG LEU LYS TRP THR SEQRES 5 A 143 GLY LYS GLY ASN GLN VAL THR LEU GLN ASN VAL LYS SER SEQRES 6 A 143 GLY THR TYR VAL GLY THR ALA SER ASN ILE GLN ASN SER SEQRES 7 A 143 VAL ASN VAL VAL GLY SER THR THR ALA VAL PRO LEU ASP SEQRES 8 A 143 ILE VAL ALA ALA ASP LYS GLY PHE ALA ILE GLU ALA ALA SEQRES 9 A 143 ASP HIS ARG LEU PHE VAL LEU ASP LEU LYS GLU SER ASN SEQRES 10 A 143 PRO ALA ASN GLU THR PRO VAL ILE TYR TYR ASN ASN ASN SEQRES 11 A 143 ALA THR ASP ASN GLN LYS TRP LYS PHE ILE ASP GLU LYS SEQRES 1 B 143 ALA PRO ILE SER LEU PRO ALA GLY THR TYR THR LEU LYS SEQRES 2 B 143 ASN VAL SER THR GLY THR VAL LEU ASP LEU TRP ARG GLY SEQRES 3 B 143 GLU ALA ALA GLU GLY THR ALA ILE GLN GLY TYR LYS SER SEQRES 4 B 143 HIS GLY GLY ASP ASN GLN LYS TRP ARG LEU LYS TRP THR SEQRES 5 B 143 GLY LYS GLY ASN GLN VAL THR LEU GLN ASN VAL LYS SER SEQRES 6 B 143 GLY THR TYR VAL GLY THR ALA SER ASN ILE GLN ASN SER SEQRES 7 B 143 VAL ASN VAL VAL GLY SER THR THR ALA VAL PRO LEU ASP SEQRES 8 B 143 ILE VAL ALA ALA ASP LYS GLY PHE ALA ILE GLU ALA ALA SEQRES 9 B 143 ASP HIS ARG LEU PHE VAL LEU ASP LEU LYS GLU SER ASN SEQRES 10 B 143 PRO ALA ASN GLU THR PRO VAL ILE TYR TYR ASN ASN ASN SEQRES 11 B 143 ALA THR ASP ASN GLN LYS TRP LYS PHE ILE ASP GLU LYS FORMUL 3 HOH *247(H2 O) HELIX 1 1 ARG A 25 GLU A 27 5 3 HELIX 2 2 GLY A 42 GLN A 45 5 4 HELIX 3 3 GLU A 115 ASN A 117 5 3 HELIX 4 4 THR A 132 GLN A 135 5 4 HELIX 5 5 ARG B 25 GLU B 27 5 3 HELIX 6 6 GLY B 42 GLN B 45 5 4 HELIX 7 7 GLU B 115 ASN B 117 5 3 HELIX 8 8 THR B 132 GLN B 135 5 4 SHEET 1 A 5 PRO A 2 ILE A 3 0 SHEET 2 A 5 TRP B 137 ASP B 141 -1 O PHE B 139 N ILE A 3 SHEET 3 A 5 GLY B 8 ASN B 14 -1 N LYS B 13 O LYS B 138 SHEET 4 A 5 TRP B 47 TRP B 51 -1 O LEU B 49 N GLY B 8 SHEET 5 A 5 VAL B 58 ASN B 62 -1 O GLN B 61 N ARG B 48 SHEET 1 B 5 VAL A 58 ASN A 62 0 SHEET 2 B 5 TRP A 47 TRP A 51 -1 N ARG A 48 O GLN A 61 SHEET 3 B 5 GLY A 8 ASN A 14 -1 N GLY A 8 O LEU A 49 SHEET 4 B 5 TRP A 137 ASP A 141 -1 O LYS A 138 N LYS A 13 SHEET 5 B 5 PRO B 2 ILE B 3 -1 O ILE B 3 N PHE A 139 SHEET 1 C 4 VAL A 20 LEU A 23 0 SHEET 2 C 4 THR A 32 TYR A 37 -1 O TYR A 37 N VAL A 20 SHEET 3 C 4 VAL A 79 SER A 84 -1 O GLY A 83 N THR A 32 SHEET 4 C 4 TYR A 68 THR A 71 -1 N TYR A 68 O SER A 84 SHEET 1 D 6 VAL A 20 LEU A 23 0 SHEET 2 D 6 THR A 32 TYR A 37 -1 O TYR A 37 N VAL A 20 SHEET 3 D 6 THR A 122 ASN A 128 -1 O THR A 122 N GLY A 36 SHEET 4 D 6 HIS A 106 LEU A 113 -1 N ASP A 112 O ILE A 125 SHEET 5 D 6 PHE A 99 ALA A 103 -1 N ALA A 103 O PHE A 109 SHEET 6 D 6 LEU A 90 ALA A 94 -1 N VAL A 93 O ALA A 100 SHEET 1 E 6 TYR A 68 THR A 71 0 SHEET 2 E 6 VAL A 79 SER A 84 -1 O SER A 84 N TYR A 68 SHEET 3 E 6 THR A 122 ASN A 128 -1 O TYR A 126 N VAL A 79 SHEET 4 E 6 HIS A 106 LEU A 113 -1 N ASP A 112 O ILE A 125 SHEET 5 E 6 PHE A 99 ALA A 103 -1 N ALA A 103 O PHE A 109 SHEET 6 E 6 LEU A 90 ALA A 94 -1 N VAL A 93 O ALA A 100 SHEET 1 F 4 VAL B 20 LEU B 23 0 SHEET 2 F 4 THR B 32 TYR B 37 -1 O TYR B 37 N VAL B 20 SHEET 3 F 4 VAL B 81 SER B 84 -1 O GLY B 83 N THR B 32 SHEET 4 F 4 TYR B 68 THR B 71 -1 N TYR B 68 O SER B 84 SHEET 1 G 6 VAL B 20 LEU B 23 0 SHEET 2 G 6 THR B 32 TYR B 37 -1 O TYR B 37 N VAL B 20 SHEET 3 G 6 THR B 122 ASN B 128 -1 O THR B 122 N GLY B 36 SHEET 4 G 6 HIS B 106 LEU B 113 -1 N ASP B 112 O ILE B 125 SHEET 5 G 6 PHE B 99 ALA B 103 -1 N ALA B 103 O PHE B 109 SHEET 6 G 6 LEU B 90 ALA B 94 -1 N VAL B 93 O ALA B 100 CRYST1 121.979 61.091 32.793 90.00 93.00 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008198 0.000000 0.000429 0.00000 SCALE2 0.000000 0.016369 0.000000 0.00000 SCALE3 0.000000 0.000000 0.030536 0.00000