data_4G9Q # _entry.id 4G9Q # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4G9Q RCSB RCSB073915 WWPDB D_1000073915 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id NYSGRC-020704 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4G9Q _pdbx_database_status.recvd_initial_deposition_date 2012-07-24 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hickey, H.D.' 1 'Mcgillick, B.E.' 2 'Eswaramoorthy, S.' 3 'Chamala, S.' 4 'Evans, B.' 5 'Foti, R.' 6 'Gizzi, A.' 7 'Hillerich, B.' 8 'Kar, A.' 9 'Lafleur, J.' 10 'Seidel, R.' 11 'Villigas, G.' 12 'Zencheck, W.' 13 'Almo, S.C.' 14 'Swaminathan, S.' 15 'New York Structural Genomics Research Consortium (NYSGRC)' 16 # _citation.id primary _citation.title 'Crystal structure of a 4-carboxymuconolactone decarboxylase' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Hickey, H.D.' 1 primary 'Mcgillick, B.E.' 2 primary 'Eswaramoorthy, S.' 3 primary 'Almo, S.C.' 4 primary 'Swaminathan, S.' 5 # _cell.entry_id 4G9Q _cell.length_a 104.345 _cell.length_b 104.345 _cell.length_c 63.191 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 120.00 _cell.Z_PDB 9 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4G9Q _symmetry.space_group_name_H-M 'H 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 146 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man '4-carboxymuconolactone decarboxylase' 29781.504 1 ? ? ? ? 2 water nat water 18.015 154 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)HHHHHHSSGVDLGTENLYFQS(MSE)(MSE)TTSNAGAQQPNVEGRRFSPDQVRSVAPALEQYTQQRLYGDVWQR PGLNRRDRSLVTIAALIARGEAPALTYYADQALENGVKPSEISETITHLAYYSGWGKA(MSE)ATVGPVSEAFAKRGIGQ DQLAAVESTPLPLDEEAEAQRATTVGNQFGSVAPGLVQYTTDYLFRDLWLRPDLAPRDRSLVTIAALISVGQVEQITFHL NKALDNGLSEEQAAEVITHLAFYAGWPNA(MSE)SALPVAKAVFEKRRG ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSMMTTSNAGAQQPNVEGRRFSPDQVRSVAPALEQYTQQRLYGDVWQRPGLNRRDRSLVT IAALIARGEAPALTYYADQALENGVKPSEISETITHLAYYSGWGKAMATVGPVSEAFAKRGIGQDQLAAVESTPLPLDEE AEAQRATTVGNQFGSVAPGLVQYTTDYLFRDLWLRPDLAPRDRSLVTIAALISVGQVEQITFHLNKALDNGLSEEQAAEV ITHLAFYAGWPNAMSALPVAKAVFEKRRG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier NYSGRC-020704 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 MSE n 1 24 MSE n 1 25 THR n 1 26 THR n 1 27 SER n 1 28 ASN n 1 29 ALA n 1 30 GLY n 1 31 ALA n 1 32 GLN n 1 33 GLN n 1 34 PRO n 1 35 ASN n 1 36 VAL n 1 37 GLU n 1 38 GLY n 1 39 ARG n 1 40 ARG n 1 41 PHE n 1 42 SER n 1 43 PRO n 1 44 ASP n 1 45 GLN n 1 46 VAL n 1 47 ARG n 1 48 SER n 1 49 VAL n 1 50 ALA n 1 51 PRO n 1 52 ALA n 1 53 LEU n 1 54 GLU n 1 55 GLN n 1 56 TYR n 1 57 THR n 1 58 GLN n 1 59 GLN n 1 60 ARG n 1 61 LEU n 1 62 TYR n 1 63 GLY n 1 64 ASP n 1 65 VAL n 1 66 TRP n 1 67 GLN n 1 68 ARG n 1 69 PRO n 1 70 GLY n 1 71 LEU n 1 72 ASN n 1 73 ARG n 1 74 ARG n 1 75 ASP n 1 76 ARG n 1 77 SER n 1 78 LEU n 1 79 VAL n 1 80 THR n 1 81 ILE n 1 82 ALA n 1 83 ALA n 1 84 LEU n 1 85 ILE n 1 86 ALA n 1 87 ARG n 1 88 GLY n 1 89 GLU n 1 90 ALA n 1 91 PRO n 1 92 ALA n 1 93 LEU n 1 94 THR n 1 95 TYR n 1 96 TYR n 1 97 ALA n 1 98 ASP n 1 99 GLN n 1 100 ALA n 1 101 LEU n 1 102 GLU n 1 103 ASN n 1 104 GLY n 1 105 VAL n 1 106 LYS n 1 107 PRO n 1 108 SER n 1 109 GLU n 1 110 ILE n 1 111 SER n 1 112 GLU n 1 113 THR n 1 114 ILE n 1 115 THR n 1 116 HIS n 1 117 LEU n 1 118 ALA n 1 119 TYR n 1 120 TYR n 1 121 SER n 1 122 GLY n 1 123 TRP n 1 124 GLY n 1 125 LYS n 1 126 ALA n 1 127 MSE n 1 128 ALA n 1 129 THR n 1 130 VAL n 1 131 GLY n 1 132 PRO n 1 133 VAL n 1 134 SER n 1 135 GLU n 1 136 ALA n 1 137 PHE n 1 138 ALA n 1 139 LYS n 1 140 ARG n 1 141 GLY n 1 142 ILE n 1 143 GLY n 1 144 GLN n 1 145 ASP n 1 146 GLN n 1 147 LEU n 1 148 ALA n 1 149 ALA n 1 150 VAL n 1 151 GLU n 1 152 SER n 1 153 THR n 1 154 PRO n 1 155 LEU n 1 156 PRO n 1 157 LEU n 1 158 ASP n 1 159 GLU n 1 160 GLU n 1 161 ALA n 1 162 GLU n 1 163 ALA n 1 164 GLN n 1 165 ARG n 1 166 ALA n 1 167 THR n 1 168 THR n 1 169 VAL n 1 170 GLY n 1 171 ASN n 1 172 GLN n 1 173 PHE n 1 174 GLY n 1 175 SER n 1 176 VAL n 1 177 ALA n 1 178 PRO n 1 179 GLY n 1 180 LEU n 1 181 VAL n 1 182 GLN n 1 183 TYR n 1 184 THR n 1 185 THR n 1 186 ASP n 1 187 TYR n 1 188 LEU n 1 189 PHE n 1 190 ARG n 1 191 ASP n 1 192 LEU n 1 193 TRP n 1 194 LEU n 1 195 ARG n 1 196 PRO n 1 197 ASP n 1 198 LEU n 1 199 ALA n 1 200 PRO n 1 201 ARG n 1 202 ASP n 1 203 ARG n 1 204 SER n 1 205 LEU n 1 206 VAL n 1 207 THR n 1 208 ILE n 1 209 ALA n 1 210 ALA n 1 211 LEU n 1 212 ILE n 1 213 SER n 1 214 VAL n 1 215 GLY n 1 216 GLN n 1 217 VAL n 1 218 GLU n 1 219 GLN n 1 220 ILE n 1 221 THR n 1 222 PHE n 1 223 HIS n 1 224 LEU n 1 225 ASN n 1 226 LYS n 1 227 ALA n 1 228 LEU n 1 229 ASP n 1 230 ASN n 1 231 GLY n 1 232 LEU n 1 233 SER n 1 234 GLU n 1 235 GLU n 1 236 GLN n 1 237 ALA n 1 238 ALA n 1 239 GLU n 1 240 VAL n 1 241 ILE n 1 242 THR n 1 243 HIS n 1 244 LEU n 1 245 ALA n 1 246 PHE n 1 247 TYR n 1 248 ALA n 1 249 GLY n 1 250 TRP n 1 251 PRO n 1 252 ASN n 1 253 ALA n 1 254 MSE n 1 255 SER n 1 256 ALA n 1 257 LEU n 1 258 PRO n 1 259 VAL n 1 260 ALA n 1 261 LYS n 1 262 ALA n 1 263 VAL n 1 264 PHE n 1 265 GLU n 1 266 LYS n 1 267 ARG n 1 268 ARG n 1 269 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'RA0292, SMa0559' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 1021 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Sinorhizobium meliloti' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 266834 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type PLASMID _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PET3A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q930A6_RHIME _struct_ref.pdbx_db_accession Q930A6 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MMTTSNAGAQQPNVEGRRFSPDQVRSVAPALEQYTQQRLYGDVWQRPGLNRRDRSLVTIAALIARGEAPALTYYADQALE NGVKPSEISETITHLAYYSGWGKAMATVGPVSEAFAKRGIGQDQLAAVESTPLPLDEEAEAQRATTVGNQFGSVAPGLVQ YTTDYLFRDLWLRPDLAPRDRSLVTIAALISVGQVEQITFHLNKALDNGLSEEQAAEVITHLAFYAGWPNAMSALPVAKA VFEKRRG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4G9Q _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 23 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 269 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q930A6 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 247 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 247 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4G9Q MSE A 1 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -21 1 1 4G9Q HIS A 2 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -20 2 1 4G9Q HIS A 3 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -19 3 1 4G9Q HIS A 4 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -18 4 1 4G9Q HIS A 5 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -17 5 1 4G9Q HIS A 6 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -16 6 1 4G9Q HIS A 7 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -15 7 1 4G9Q SER A 8 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -14 8 1 4G9Q SER A 9 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -13 9 1 4G9Q GLY A 10 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -12 10 1 4G9Q VAL A 11 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -11 11 1 4G9Q ASP A 12 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -10 12 1 4G9Q LEU A 13 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -9 13 1 4G9Q GLY A 14 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -8 14 1 4G9Q THR A 15 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -7 15 1 4G9Q GLU A 16 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -6 16 1 4G9Q ASN A 17 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -5 17 1 4G9Q LEU A 18 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -4 18 1 4G9Q TYR A 19 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -3 19 1 4G9Q PHE A 20 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -2 20 1 4G9Q GLN A 21 ? UNP Q930A6 ? ? 'EXPRESSION TAG' -1 21 1 4G9Q SER A 22 ? UNP Q930A6 ? ? 'EXPRESSION TAG' 0 22 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4G9Q _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.22 _exptl_crystal.density_percent_sol 44.67 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '15% PEG3350; 0.1M Magnesium formate, sodium Iodide, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2012-07-16 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9792 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X29A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X29A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9792 # _reflns.entry_id 4G9Q _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50.0 _reflns.d_resolution_high 1.77 _reflns.number_obs 24950 _reflns.number_all 24950 _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 28.4 _reflns.B_iso_Wilson_estimate 14.19 _reflns.pdbx_redundancy 11.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.77 _reflns_shell.d_res_low 1.82 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.104 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs ? _reflns_shell.pdbx_redundancy 11.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2075 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4G9Q _refine.ls_number_reflns_obs 23678 _refine.ls_number_reflns_all 23678 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 50.0 _refine.ls_d_res_high 1.77 _refine.ls_percent_reflns_obs 99.81 _refine.ls_R_factor_obs 0.17554 _refine.ls_R_factor_all 0.175 _refine.ls_R_factor_R_work 0.17464 _refine.ls_R_factor_R_free 0.19218 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1272 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.946 _refine.correlation_coeff_Fo_to_Fc_free 0.937 _refine.B_iso_mean 12.681 _refine.aniso_B[1][1] -0.41 _refine.aniso_B[2][2] -0.41 _refine.aniso_B[3][3] 0.62 _refine.aniso_B[1][2] -0.21 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.112 _refine.pdbx_overall_ESU_R_Free 0.101 _refine.overall_SU_ML 0.057 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.697 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1844 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 154 _refine_hist.number_atoms_total 1998 _refine_hist.d_res_high 1.77 _refine_hist.d_res_low 50.0 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.007 0.022 ? 1884 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 0.995 1.956 ? 2567 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 4.371 5.000 ? 237 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 34.256 23.667 ? 90 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 13.736 15.000 ? 295 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 15.671 15.000 ? 17 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.077 0.200 ? 285 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.021 ? 1468 ? 'X-RAY DIFFRACTION' r_mcbond_it 0.408 1.500 ? 1186 ? 'X-RAY DIFFRACTION' r_mcangle_it 0.836 2.000 ? 1901 ? 'X-RAY DIFFRACTION' r_scbond_it 1.694 3.000 ? 698 ? 'X-RAY DIFFRACTION' r_scangle_it 2.811 4.500 ? 666 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.770 _refine_ls_shell.d_res_low 1.816 _refine_ls_shell.number_reflns_R_work 1739 _refine_ls_shell.R_factor_R_work 0.199 _refine_ls_shell.percent_reflns_obs 100.00 _refine_ls_shell.R_factor_R_free 0.210 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 97 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 1836 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4G9Q _struct.title 'Crystal structure of a 4-carboxymuconolactone decarboxylase' _struct.pdbx_descriptor '4-carboxymuconolactone decarboxylase' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4G9Q _struct_keywords.pdbx_keywords LYASE _struct_keywords.text ;PSI-biology, nysgrc, Structural Genomics, New York Structural Genomics Research Consortium, All alpha structure, trimer, Benzoate degradation, LYASE ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 35 ? ARG A 39 ? ASN A 13 ARG A 17 5 ? 5 HELX_P HELX_P2 2 SER A 42 ? SER A 48 ? SER A 20 SER A 26 1 ? 7 HELX_P HELX_P3 3 ALA A 50 ? ARG A 60 ? ALA A 28 ARG A 38 1 ? 11 HELX_P HELX_P4 4 ASP A 64 ? ARG A 68 ? ASP A 42 ARG A 46 5 ? 5 HELX_P HELX_P5 5 ASN A 72 ? ARG A 87 ? ASN A 50 ARG A 65 1 ? 16 HELX_P HELX_P6 6 GLU A 89 ? PRO A 91 ? GLU A 67 PRO A 69 5 ? 3 HELX_P HELX_P7 7 ALA A 92 ? ASN A 103 ? ALA A 70 ASN A 81 1 ? 12 HELX_P HELX_P8 8 LYS A 106 ? SER A 121 ? LYS A 84 SER A 99 1 ? 16 HELX_P HELX_P9 9 GLY A 122 ? ALA A 128 ? GLY A 100 ALA A 106 1 ? 7 HELX_P HELX_P10 10 THR A 129 ? ARG A 140 ? THR A 107 ARG A 118 1 ? 12 HELX_P HELX_P11 11 GLY A 143 ? LEU A 147 ? GLY A 121 LEU A 125 5 ? 5 HELX_P HELX_P12 12 ASP A 158 ? GLY A 174 ? ASP A 136 GLY A 152 1 ? 17 HELX_P HELX_P13 13 ALA A 177 ? LEU A 188 ? ALA A 155 LEU A 166 1 ? 12 HELX_P HELX_P14 14 ASP A 191 ? ARG A 195 ? ASP A 169 ARG A 173 5 ? 5 HELX_P HELX_P15 15 ALA A 199 ? VAL A 214 ? ALA A 177 VAL A 192 1 ? 16 HELX_P HELX_P16 16 GLY A 215 ? GLU A 218 ? GLY A 193 GLU A 196 5 ? 4 HELX_P HELX_P17 17 GLN A 219 ? ASN A 230 ? GLN A 197 ASN A 208 1 ? 12 HELX_P HELX_P18 18 SER A 233 ? GLY A 249 ? SER A 211 GLY A 227 1 ? 17 HELX_P HELX_P19 19 GLY A 249 ? ARG A 268 ? GLY A 227 ARG A 246 1 ? 20 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A ALA 126 C ? ? ? 1_555 A MSE 127 N ? ? A ALA 104 A MSE 105 1_555 ? ? ? ? ? ? ? 1.330 ? covale2 covale ? ? A MSE 127 C ? ? ? 1_555 A ALA 128 N ? ? A MSE 105 A ALA 106 1_555 ? ? ? ? ? ? ? 1.332 ? covale3 covale ? ? A ALA 253 C ? ? ? 1_555 A MSE 254 N ? ? A ALA 231 A MSE 232 1_555 ? ? ? ? ? ? ? 1.331 ? covale4 covale ? ? A MSE 254 C ? ? ? 1_555 A SER 255 N ? ? A MSE 232 A SER 233 1_555 ? ? ? ? ? ? ? 1.333 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _database_PDB_matrix.entry_id 4G9Q _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4G9Q _atom_sites.fract_transf_matrix[1][1] 0.009584 _atom_sites.fract_transf_matrix[1][2] 0.005533 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011066 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.015825 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 -21 ? ? ? A . n A 1 2 HIS 2 -20 ? ? ? A . n A 1 3 HIS 3 -19 ? ? ? A . n A 1 4 HIS 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 SER 8 -14 ? ? ? A . n A 1 9 SER 9 -13 ? ? ? A . n A 1 10 GLY 10 -12 ? ? ? A . n A 1 11 VAL 11 -11 ? ? ? A . n A 1 12 ASP 12 -10 ? ? ? A . n A 1 13 LEU 13 -9 ? ? ? A . n A 1 14 GLY 14 -8 ? ? ? A . n A 1 15 THR 15 -7 ? ? ? A . n A 1 16 GLU 16 -6 ? ? ? A . n A 1 17 ASN 17 -5 ? ? ? A . n A 1 18 LEU 18 -4 ? ? ? A . n A 1 19 TYR 19 -3 ? ? ? A . n A 1 20 PHE 20 -2 ? ? ? A . n A 1 21 GLN 21 -1 ? ? ? A . n A 1 22 SER 22 0 ? ? ? A . n A 1 23 MSE 23 1 ? ? ? A . n A 1 24 MSE 24 2 ? ? ? A . n A 1 25 THR 25 3 ? ? ? A . n A 1 26 THR 26 4 ? ? ? A . n A 1 27 SER 27 5 ? ? ? A . n A 1 28 ASN 28 6 ? ? ? A . n A 1 29 ALA 29 7 ? ? ? A . n A 1 30 GLY 30 8 ? ? ? A . n A 1 31 ALA 31 9 ? ? ? A . n A 1 32 GLN 32 10 10 GLN GLN A . n A 1 33 GLN 33 11 11 GLN GLN A . n A 1 34 PRO 34 12 12 PRO PRO A . n A 1 35 ASN 35 13 13 ASN ASN A . n A 1 36 VAL 36 14 14 VAL VAL A . n A 1 37 GLU 37 15 15 GLU GLU A . n A 1 38 GLY 38 16 16 GLY GLY A . n A 1 39 ARG 39 17 17 ARG ARG A . n A 1 40 ARG 40 18 18 ARG ARG A . n A 1 41 PHE 41 19 19 PHE PHE A . n A 1 42 SER 42 20 20 SER SER A . n A 1 43 PRO 43 21 21 PRO PRO A . n A 1 44 ASP 44 22 22 ASP ASP A . n A 1 45 GLN 45 23 23 GLN GLN A . n A 1 46 VAL 46 24 24 VAL VAL A . n A 1 47 ARG 47 25 25 ARG ARG A . n A 1 48 SER 48 26 26 SER SER A . n A 1 49 VAL 49 27 27 VAL VAL A . n A 1 50 ALA 50 28 28 ALA ALA A . n A 1 51 PRO 51 29 29 PRO PRO A . n A 1 52 ALA 52 30 30 ALA ALA A . n A 1 53 LEU 53 31 31 LEU LEU A . n A 1 54 GLU 54 32 32 GLU GLU A . n A 1 55 GLN 55 33 33 GLN GLN A . n A 1 56 TYR 56 34 34 TYR TYR A . n A 1 57 THR 57 35 35 THR THR A . n A 1 58 GLN 58 36 36 GLN GLN A . n A 1 59 GLN 59 37 37 GLN GLN A . n A 1 60 ARG 60 38 38 ARG ARG A . n A 1 61 LEU 61 39 39 LEU LEU A . n A 1 62 TYR 62 40 40 TYR TYR A . n A 1 63 GLY 63 41 41 GLY GLY A . n A 1 64 ASP 64 42 42 ASP ASP A . n A 1 65 VAL 65 43 43 VAL VAL A . n A 1 66 TRP 66 44 44 TRP TRP A . n A 1 67 GLN 67 45 45 GLN GLN A . n A 1 68 ARG 68 46 46 ARG ARG A . n A 1 69 PRO 69 47 47 PRO PRO A . n A 1 70 GLY 70 48 48 GLY GLY A . n A 1 71 LEU 71 49 49 LEU LEU A . n A 1 72 ASN 72 50 50 ASN ASN A . n A 1 73 ARG 73 51 51 ARG ARG A . n A 1 74 ARG 74 52 52 ARG ARG A . n A 1 75 ASP 75 53 53 ASP ASP A . n A 1 76 ARG 76 54 54 ARG ARG A . n A 1 77 SER 77 55 55 SER SER A . n A 1 78 LEU 78 56 56 LEU LEU A . n A 1 79 VAL 79 57 57 VAL VAL A . n A 1 80 THR 80 58 58 THR THR A . n A 1 81 ILE 81 59 59 ILE ILE A . n A 1 82 ALA 82 60 60 ALA ALA A . n A 1 83 ALA 83 61 61 ALA ALA A . n A 1 84 LEU 84 62 62 LEU LEU A . n A 1 85 ILE 85 63 63 ILE ILE A . n A 1 86 ALA 86 64 64 ALA ALA A . n A 1 87 ARG 87 65 65 ARG ARG A . n A 1 88 GLY 88 66 66 GLY GLY A . n A 1 89 GLU 89 67 67 GLU GLU A . n A 1 90 ALA 90 68 68 ALA ALA A . n A 1 91 PRO 91 69 69 PRO PRO A . n A 1 92 ALA 92 70 70 ALA ALA A . n A 1 93 LEU 93 71 71 LEU LEU A . n A 1 94 THR 94 72 72 THR THR A . n A 1 95 TYR 95 73 73 TYR TYR A . n A 1 96 TYR 96 74 74 TYR TYR A . n A 1 97 ALA 97 75 75 ALA ALA A . n A 1 98 ASP 98 76 76 ASP ASP A . n A 1 99 GLN 99 77 77 GLN GLN A . n A 1 100 ALA 100 78 78 ALA ALA A . n A 1 101 LEU 101 79 79 LEU LEU A . n A 1 102 GLU 102 80 80 GLU GLU A . n A 1 103 ASN 103 81 81 ASN ASN A . n A 1 104 GLY 104 82 82 GLY GLY A . n A 1 105 VAL 105 83 83 VAL VAL A . n A 1 106 LYS 106 84 84 LYS LYS A . n A 1 107 PRO 107 85 85 PRO PRO A . n A 1 108 SER 108 86 86 SER SER A . n A 1 109 GLU 109 87 87 GLU GLU A . n A 1 110 ILE 110 88 88 ILE ILE A . n A 1 111 SER 111 89 89 SER SER A . n A 1 112 GLU 112 90 90 GLU GLU A . n A 1 113 THR 113 91 91 THR THR A . n A 1 114 ILE 114 92 92 ILE ILE A . n A 1 115 THR 115 93 93 THR THR A . n A 1 116 HIS 116 94 94 HIS HIS A . n A 1 117 LEU 117 95 95 LEU LEU A . n A 1 118 ALA 118 96 96 ALA ALA A . n A 1 119 TYR 119 97 97 TYR TYR A . n A 1 120 TYR 120 98 98 TYR TYR A . n A 1 121 SER 121 99 99 SER SER A . n A 1 122 GLY 122 100 100 GLY GLY A . n A 1 123 TRP 123 101 101 TRP TRP A . n A 1 124 GLY 124 102 102 GLY GLY A . n A 1 125 LYS 125 103 103 LYS LYS A . n A 1 126 ALA 126 104 104 ALA ALA A . n A 1 127 MSE 127 105 105 MSE MSE A . n A 1 128 ALA 128 106 106 ALA ALA A . n A 1 129 THR 129 107 107 THR THR A . n A 1 130 VAL 130 108 108 VAL VAL A . n A 1 131 GLY 131 109 109 GLY GLY A . n A 1 132 PRO 132 110 110 PRO PRO A . n A 1 133 VAL 133 111 111 VAL VAL A . n A 1 134 SER 134 112 112 SER SER A . n A 1 135 GLU 135 113 113 GLU GLU A . n A 1 136 ALA 136 114 114 ALA ALA A . n A 1 137 PHE 137 115 115 PHE PHE A . n A 1 138 ALA 138 116 116 ALA ALA A . n A 1 139 LYS 139 117 117 LYS LYS A . n A 1 140 ARG 140 118 118 ARG ARG A . n A 1 141 GLY 141 119 119 GLY GLY A . n A 1 142 ILE 142 120 120 ILE ILE A . n A 1 143 GLY 143 121 121 GLY GLY A . n A 1 144 GLN 144 122 122 GLN GLN A . n A 1 145 ASP 145 123 123 ASP ASP A . n A 1 146 GLN 146 124 124 GLN GLN A . n A 1 147 LEU 147 125 125 LEU LEU A . n A 1 148 ALA 148 126 126 ALA ALA A . n A 1 149 ALA 149 127 127 ALA ALA A . n A 1 150 VAL 150 128 128 VAL VAL A . n A 1 151 GLU 151 129 129 GLU GLU A . n A 1 152 SER 152 130 130 SER SER A . n A 1 153 THR 153 131 131 THR THR A . n A 1 154 PRO 154 132 132 PRO PRO A . n A 1 155 LEU 155 133 133 LEU LEU A . n A 1 156 PRO 156 134 134 PRO PRO A . n A 1 157 LEU 157 135 135 LEU LEU A . n A 1 158 ASP 158 136 136 ASP ASP A . n A 1 159 GLU 159 137 137 GLU GLU A . n A 1 160 GLU 160 138 138 GLU GLU A . n A 1 161 ALA 161 139 139 ALA ALA A . n A 1 162 GLU 162 140 140 GLU GLU A . n A 1 163 ALA 163 141 141 ALA ALA A . n A 1 164 GLN 164 142 142 GLN GLN A . n A 1 165 ARG 165 143 143 ARG ARG A . n A 1 166 ALA 166 144 144 ALA ALA A . n A 1 167 THR 167 145 145 THR THR A . n A 1 168 THR 168 146 146 THR THR A . n A 1 169 VAL 169 147 147 VAL VAL A . n A 1 170 GLY 170 148 148 GLY GLY A . n A 1 171 ASN 171 149 149 ASN ASN A . n A 1 172 GLN 172 150 150 GLN GLN A . n A 1 173 PHE 173 151 151 PHE PHE A . n A 1 174 GLY 174 152 152 GLY GLY A . n A 1 175 SER 175 153 153 SER SER A . n A 1 176 VAL 176 154 154 VAL VAL A . n A 1 177 ALA 177 155 155 ALA ALA A . n A 1 178 PRO 178 156 156 PRO PRO A . n A 1 179 GLY 179 157 157 GLY GLY A . n A 1 180 LEU 180 158 158 LEU LEU A . n A 1 181 VAL 181 159 159 VAL VAL A . n A 1 182 GLN 182 160 160 GLN GLN A . n A 1 183 TYR 183 161 161 TYR TYR A . n A 1 184 THR 184 162 162 THR THR A . n A 1 185 THR 185 163 163 THR THR A . n A 1 186 ASP 186 164 164 ASP ASP A . n A 1 187 TYR 187 165 165 TYR TYR A . n A 1 188 LEU 188 166 166 LEU LEU A . n A 1 189 PHE 189 167 167 PHE PHE A . n A 1 190 ARG 190 168 168 ARG ARG A . n A 1 191 ASP 191 169 169 ASP ASP A . n A 1 192 LEU 192 170 170 LEU LEU A . n A 1 193 TRP 193 171 171 TRP TRP A . n A 1 194 LEU 194 172 172 LEU LEU A . n A 1 195 ARG 195 173 173 ARG ARG A . n A 1 196 PRO 196 174 174 PRO PRO A . n A 1 197 ASP 197 175 175 ASP ASP A . n A 1 198 LEU 198 176 176 LEU LEU A . n A 1 199 ALA 199 177 177 ALA ALA A . n A 1 200 PRO 200 178 178 PRO PRO A . n A 1 201 ARG 201 179 179 ARG ARG A . n A 1 202 ASP 202 180 180 ASP ASP A . n A 1 203 ARG 203 181 181 ARG ARG A . n A 1 204 SER 204 182 182 SER SER A . n A 1 205 LEU 205 183 183 LEU LEU A . n A 1 206 VAL 206 184 184 VAL VAL A . n A 1 207 THR 207 185 185 THR THR A . n A 1 208 ILE 208 186 186 ILE ILE A . n A 1 209 ALA 209 187 187 ALA ALA A . n A 1 210 ALA 210 188 188 ALA ALA A . n A 1 211 LEU 211 189 189 LEU LEU A . n A 1 212 ILE 212 190 190 ILE ILE A . n A 1 213 SER 213 191 191 SER SER A . n A 1 214 VAL 214 192 192 VAL VAL A . n A 1 215 GLY 215 193 193 GLY GLY A . n A 1 216 GLN 216 194 194 GLN GLN A . n A 1 217 VAL 217 195 195 VAL VAL A . n A 1 218 GLU 218 196 196 GLU GLU A . n A 1 219 GLN 219 197 197 GLN GLN A . n A 1 220 ILE 220 198 198 ILE ILE A . n A 1 221 THR 221 199 199 THR THR A . n A 1 222 PHE 222 200 200 PHE PHE A . n A 1 223 HIS 223 201 201 HIS HIS A . n A 1 224 LEU 224 202 202 LEU LEU A . n A 1 225 ASN 225 203 203 ASN ASN A . n A 1 226 LYS 226 204 204 LYS LYS A . n A 1 227 ALA 227 205 205 ALA ALA A . n A 1 228 LEU 228 206 206 LEU LEU A . n A 1 229 ASP 229 207 207 ASP ASP A . n A 1 230 ASN 230 208 208 ASN ASN A . n A 1 231 GLY 231 209 209 GLY GLY A . n A 1 232 LEU 232 210 210 LEU LEU A . n A 1 233 SER 233 211 211 SER SER A . n A 1 234 GLU 234 212 212 GLU GLU A . n A 1 235 GLU 235 213 213 GLU GLU A . n A 1 236 GLN 236 214 214 GLN GLN A . n A 1 237 ALA 237 215 215 ALA ALA A . n A 1 238 ALA 238 216 216 ALA ALA A . n A 1 239 GLU 239 217 217 GLU GLU A . n A 1 240 VAL 240 218 218 VAL VAL A . n A 1 241 ILE 241 219 219 ILE ILE A . n A 1 242 THR 242 220 220 THR THR A . n A 1 243 HIS 243 221 221 HIS HIS A . n A 1 244 LEU 244 222 222 LEU LEU A . n A 1 245 ALA 245 223 223 ALA ALA A . n A 1 246 PHE 246 224 224 PHE PHE A . n A 1 247 TYR 247 225 225 TYR TYR A . n A 1 248 ALA 248 226 226 ALA ALA A . n A 1 249 GLY 249 227 227 GLY GLY A . n A 1 250 TRP 250 228 228 TRP TRP A . n A 1 251 PRO 251 229 229 PRO PRO A . n A 1 252 ASN 252 230 230 ASN ASN A . n A 1 253 ALA 253 231 231 ALA ALA A . n A 1 254 MSE 254 232 232 MSE MSE A . n A 1 255 SER 255 233 233 SER SER A . n A 1 256 ALA 256 234 234 ALA ALA A . n A 1 257 LEU 257 235 235 LEU LEU A . n A 1 258 PRO 258 236 236 PRO PRO A . n A 1 259 VAL 259 237 237 VAL VAL A . n A 1 260 ALA 260 238 238 ALA ALA A . n A 1 261 LYS 261 239 239 LYS LYS A . n A 1 262 ALA 262 240 240 ALA ALA A . n A 1 263 VAL 263 241 241 VAL VAL A . n A 1 264 PHE 264 242 242 PHE PHE A . n A 1 265 GLU 265 243 243 GLU GLU A . n A 1 266 LYS 266 244 244 LYS LYS A . n A 1 267 ARG 267 245 245 ARG ARG A . n A 1 268 ARG 268 246 246 ARG ARG A . n A 1 269 GLY 269 247 247 GLY GLY A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'New York Structural Genomics Research Consortium' _pdbx_SG_project.initial_of_center NYSGRC # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 127 A MSE 105 ? MET SELENOMETHIONINE 2 A MSE 254 A MSE 232 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3 _pdbx_struct_assembly_gen.asym_id_list A,B # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 11020 ? 1 MORE -77 ? 1 'SSA (A^2)' 26340 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_555 -y,x-y,z -0.5000000000 -0.8660254038 0.0000000000 0.0000000000 0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_555 -x+y,-x,z -0.5000000000 0.8660254038 0.0000000000 0.0000000000 -0.8660254038 -0.5000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-08-15 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal CBASS 'data collection' . ? 1 SHELXS phasing . ? 2 REFMAC refinement 5.5.0110 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 28 ? ? -156.23 80.80 2 1 ASP A 42 ? ? -125.72 -65.15 3 1 LEU A 166 ? ? -95.27 -68.32 4 1 ASP A 169 ? ? -143.40 -77.24 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MSE -21 ? A MSE 1 2 1 Y 1 A HIS -20 ? A HIS 2 3 1 Y 1 A HIS -19 ? A HIS 3 4 1 Y 1 A HIS -18 ? A HIS 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A SER -14 ? A SER 8 9 1 Y 1 A SER -13 ? A SER 9 10 1 Y 1 A GLY -12 ? A GLY 10 11 1 Y 1 A VAL -11 ? A VAL 11 12 1 Y 1 A ASP -10 ? A ASP 12 13 1 Y 1 A LEU -9 ? A LEU 13 14 1 Y 1 A GLY -8 ? A GLY 14 15 1 Y 1 A THR -7 ? A THR 15 16 1 Y 1 A GLU -6 ? A GLU 16 17 1 Y 1 A ASN -5 ? A ASN 17 18 1 Y 1 A LEU -4 ? A LEU 18 19 1 Y 1 A TYR -3 ? A TYR 19 20 1 Y 1 A PHE -2 ? A PHE 20 21 1 Y 1 A GLN -1 ? A GLN 21 22 1 Y 1 A SER 0 ? A SER 22 23 1 Y 1 A MSE 1 ? A MSE 23 24 1 Y 1 A MSE 2 ? A MSE 24 25 1 Y 1 A THR 3 ? A THR 25 26 1 Y 1 A THR 4 ? A THR 26 27 1 Y 1 A SER 5 ? A SER 27 28 1 Y 1 A ASN 6 ? A ASN 28 29 1 Y 1 A ALA 7 ? A ALA 29 30 1 Y 1 A GLY 8 ? A GLY 30 31 1 Y 1 A ALA 9 ? A ALA 31 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 1 HOH HOH A . B 2 HOH 2 302 2 HOH HOH A . B 2 HOH 3 303 3 HOH HOH A . B 2 HOH 4 304 4 HOH HOH A . B 2 HOH 5 305 5 HOH HOH A . B 2 HOH 6 306 6 HOH HOH A . B 2 HOH 7 307 7 HOH HOH A . B 2 HOH 8 308 8 HOH HOH A . B 2 HOH 9 309 9 HOH HOH A . B 2 HOH 10 310 10 HOH HOH A . B 2 HOH 11 311 11 HOH HOH A . B 2 HOH 12 312 12 HOH HOH A . B 2 HOH 13 313 13 HOH HOH A . B 2 HOH 14 314 14 HOH HOH A . B 2 HOH 15 315 15 HOH HOH A . B 2 HOH 16 316 16 HOH HOH A . B 2 HOH 17 317 17 HOH HOH A . B 2 HOH 18 318 18 HOH HOH A . B 2 HOH 19 319 19 HOH HOH A . B 2 HOH 20 320 20 HOH HOH A . B 2 HOH 21 321 21 HOH HOH A . B 2 HOH 22 322 22 HOH HOH A . B 2 HOH 23 323 23 HOH HOH A . B 2 HOH 24 324 24 HOH HOH A . B 2 HOH 25 325 25 HOH HOH A . B 2 HOH 26 326 26 HOH HOH A . B 2 HOH 27 327 27 HOH HOH A . B 2 HOH 28 328 28 HOH HOH A . B 2 HOH 29 329 29 HOH HOH A . B 2 HOH 30 330 30 HOH HOH A . B 2 HOH 31 331 31 HOH HOH A . B 2 HOH 32 332 32 HOH HOH A . B 2 HOH 33 333 33 HOH HOH A . B 2 HOH 34 334 34 HOH HOH A . B 2 HOH 35 335 35 HOH HOH A . B 2 HOH 36 336 36 HOH HOH A . B 2 HOH 37 337 37 HOH HOH A . B 2 HOH 38 338 38 HOH HOH A . B 2 HOH 39 339 39 HOH HOH A . B 2 HOH 40 340 40 HOH HOH A . B 2 HOH 41 341 41 HOH HOH A . B 2 HOH 42 342 42 HOH HOH A . B 2 HOH 43 343 43 HOH HOH A . B 2 HOH 44 344 44 HOH HOH A . B 2 HOH 45 345 45 HOH HOH A . B 2 HOH 46 346 46 HOH HOH A . B 2 HOH 47 347 47 HOH HOH A . B 2 HOH 48 348 48 HOH HOH A . B 2 HOH 49 349 49 HOH HOH A . B 2 HOH 50 350 50 HOH HOH A . B 2 HOH 51 351 51 HOH HOH A . B 2 HOH 52 352 52 HOH HOH A . B 2 HOH 53 353 53 HOH HOH A . B 2 HOH 54 354 54 HOH HOH A . B 2 HOH 55 355 55 HOH HOH A . B 2 HOH 56 356 56 HOH HOH A . B 2 HOH 57 357 57 HOH HOH A . B 2 HOH 58 358 58 HOH HOH A . B 2 HOH 59 359 59 HOH HOH A . B 2 HOH 60 360 60 HOH HOH A . B 2 HOH 61 361 61 HOH HOH A . B 2 HOH 62 362 62 HOH HOH A . B 2 HOH 63 363 63 HOH HOH A . B 2 HOH 64 364 64 HOH HOH A . B 2 HOH 65 365 65 HOH HOH A . B 2 HOH 66 366 66 HOH HOH A . B 2 HOH 67 367 67 HOH HOH A . B 2 HOH 68 368 68 HOH HOH A . B 2 HOH 69 369 69 HOH HOH A . B 2 HOH 70 370 70 HOH HOH A . B 2 HOH 71 371 71 HOH HOH A . B 2 HOH 72 372 72 HOH HOH A . B 2 HOH 73 373 73 HOH HOH A . B 2 HOH 74 374 74 HOH HOH A . B 2 HOH 75 375 75 HOH HOH A . B 2 HOH 76 376 76 HOH HOH A . B 2 HOH 77 377 77 HOH HOH A . B 2 HOH 78 378 78 HOH HOH A . B 2 HOH 79 379 79 HOH HOH A . B 2 HOH 80 380 80 HOH HOH A . B 2 HOH 81 381 81 HOH HOH A . B 2 HOH 82 382 82 HOH HOH A . B 2 HOH 83 383 83 HOH HOH A . B 2 HOH 84 384 84 HOH HOH A . B 2 HOH 85 385 85 HOH HOH A . B 2 HOH 86 386 86 HOH HOH A . B 2 HOH 87 387 87 HOH HOH A . B 2 HOH 88 388 88 HOH HOH A . B 2 HOH 89 389 89 HOH HOH A . B 2 HOH 90 390 90 HOH HOH A . B 2 HOH 91 391 91 HOH HOH A . B 2 HOH 92 392 92 HOH HOH A . B 2 HOH 93 393 93 HOH HOH A . B 2 HOH 94 394 94 HOH HOH A . B 2 HOH 95 395 95 HOH HOH A . B 2 HOH 96 396 96 HOH HOH A . B 2 HOH 97 397 97 HOH HOH A . B 2 HOH 98 398 98 HOH HOH A . B 2 HOH 99 399 99 HOH HOH A . B 2 HOH 100 400 100 HOH HOH A . B 2 HOH 101 401 101 HOH HOH A . B 2 HOH 102 402 102 HOH HOH A . B 2 HOH 103 403 103 HOH HOH A . B 2 HOH 104 404 104 HOH HOH A . B 2 HOH 105 405 105 HOH HOH A . B 2 HOH 106 406 106 HOH HOH A . B 2 HOH 107 407 107 HOH HOH A . B 2 HOH 108 408 108 HOH HOH A . B 2 HOH 109 409 109 HOH HOH A . B 2 HOH 110 410 110 HOH HOH A . B 2 HOH 111 411 111 HOH HOH A . B 2 HOH 112 412 112 HOH HOH A . B 2 HOH 113 413 113 HOH HOH A . B 2 HOH 114 414 115 HOH HOH A . B 2 HOH 115 415 116 HOH HOH A . B 2 HOH 116 416 117 HOH HOH A . B 2 HOH 117 417 118 HOH HOH A . B 2 HOH 118 418 119 HOH HOH A . B 2 HOH 119 419 120 HOH HOH A . B 2 HOH 120 420 121 HOH HOH A . B 2 HOH 121 421 122 HOH HOH A . B 2 HOH 122 422 123 HOH HOH A . B 2 HOH 123 423 124 HOH HOH A . B 2 HOH 124 424 125 HOH HOH A . B 2 HOH 125 425 126 HOH HOH A . B 2 HOH 126 426 127 HOH HOH A . B 2 HOH 127 427 128 HOH HOH A . B 2 HOH 128 428 129 HOH HOH A . B 2 HOH 129 429 130 HOH HOH A . B 2 HOH 130 430 131 HOH HOH A . B 2 HOH 131 431 132 HOH HOH A . B 2 HOH 132 432 133 HOH HOH A . B 2 HOH 133 433 134 HOH HOH A . B 2 HOH 134 434 135 HOH HOH A . B 2 HOH 135 435 136 HOH HOH A . B 2 HOH 136 436 137 HOH HOH A . B 2 HOH 137 437 138 HOH HOH A . B 2 HOH 138 438 139 HOH HOH A . B 2 HOH 139 439 142 HOH HOH A . B 2 HOH 140 440 143 HOH HOH A . B 2 HOH 141 441 144 HOH HOH A . B 2 HOH 142 442 145 HOH HOH A . B 2 HOH 143 443 146 HOH HOH A . B 2 HOH 144 444 148 HOH HOH A . B 2 HOH 145 445 149 HOH HOH A . B 2 HOH 146 446 150 HOH HOH A . B 2 HOH 147 447 151 HOH HOH A . B 2 HOH 148 448 152 HOH HOH A . B 2 HOH 149 449 153 HOH HOH A . B 2 HOH 150 450 154 HOH HOH A . B 2 HOH 151 451 155 HOH HOH A . B 2 HOH 152 452 156 HOH HOH A . B 2 HOH 153 453 157 HOH HOH A . B 2 HOH 154 454 158 HOH HOH A . #