HEADER ANTIMICROBIAL PROTEIN 29-JUL-12 4GC2 TITLE CRYSTAL STRUCTURE OF THE BACTERIOCIN LLPA FROM PSEUDOMONAS SP. IN TITLE 2 COMPLEX WITH GLCNAC BETA(1-2)MAN ALPHA(1-3)[GLCNAC BETA(1-2)MAN TITLE 3 ALPHA(1-6)]MAN COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTIDACIN L1; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS SP. BW11M1; SOURCE 3 ORGANISM_TAXID: 216978; SOURCE 4 STRAIN: PSEUDOMONAS PUTIDA BW11M1; SOURCE 5 GENE: LLPA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS MONOCOT-LECTIN FOLD, BACTERIOCIN, MANNOSE BASED CARBOHYDRATES, KEYWDS 2 ANTIMICROBIAL PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR A.GARCIA-PINO,R.LORIS REVDAT 4 13-SEP-23 4GC2 1 HETSYN REVDAT 3 29-JUL-20 4GC2 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 15-NOV-17 4GC2 1 REMARK REVDAT 1 10-APR-13 4GC2 0 JRNL AUTH M.G.GHEQUIRE,A.GARCIA-PINO,E.K.LEBBE,S.SPAEPEN,R.LORIS, JRNL AUTH 2 R.DE MOT JRNL TITL STRUCTURAL DETERMINANTS FOR ACTIVITY AND SPECIFICITY OF THE JRNL TITL 2 BACTERIAL TOXIN LLPA. JRNL REF PLOS PATHOG. V. 9 03199 2013 JRNL REFN ISSN 1553-7366 JRNL PMID 23468636 JRNL DOI 10.1371/JOURNAL.PPAT.1003199 REMARK 2 REMARK 2 RESOLUTION. 2.12 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.12 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.350 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 45320 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.157 REMARK 3 R VALUE (WORKING SET) : 0.155 REMARK 3 FREE R VALUE : 0.188 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.040 REMARK 3 FREE R VALUE TEST SET COUNT : 2285 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.8945 - 5.3103 0.99 2902 160 0.1465 0.1727 REMARK 3 2 5.3103 - 4.2282 1.00 2760 139 0.1185 0.1248 REMARK 3 3 4.2282 - 3.6976 1.00 2764 142 0.1242 0.1565 REMARK 3 4 3.6976 - 3.3613 1.00 2718 125 0.1354 0.2094 REMARK 3 5 3.3613 - 3.1214 1.00 2673 155 0.1587 0.1912 REMARK 3 6 3.1214 - 2.9380 1.00 2726 148 0.1700 0.1796 REMARK 3 7 2.9380 - 2.7912 1.00 2661 139 0.1750 0.2081 REMARK 3 8 2.7912 - 2.6700 1.00 2674 151 0.1856 0.2363 REMARK 3 9 2.6700 - 2.5675 1.00 2667 136 0.1826 0.2188 REMARK 3 10 2.5675 - 2.4790 1.00 2667 131 0.1905 0.2255 REMARK 3 11 2.4790 - 2.4017 1.00 2636 135 0.1863 0.2181 REMARK 3 12 2.4017 - 2.3331 1.00 2659 163 0.1931 0.2460 REMARK 3 13 2.3331 - 2.2718 1.00 2598 151 0.1924 0.2384 REMARK 3 14 2.2718 - 2.2164 1.00 2688 130 0.2054 0.2253 REMARK 3 15 2.2164 - 2.1661 1.00 2645 149 0.2180 0.2457 REMARK 3 16 2.1661 - 2.1201 1.00 2597 131 0.2221 0.2494 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.180 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.740 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.30 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 4290 REMARK 3 ANGLE : 1.149 5877 REMARK 3 CHIRALITY : 0.092 652 REMARK 3 PLANARITY : 0.005 768 REMARK 3 DIHEDRAL : 13.572 1446 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 2 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 48.4619 6.6598 8.2800 REMARK 3 T TENSOR REMARK 3 T11: 0.3561 T22: 0.2008 REMARK 3 T33: 0.2243 T12: -0.0207 REMARK 3 T13: 0.0159 T23: 0.0565 REMARK 3 L TENSOR REMARK 3 L11: 1.8016 L22: 3.4798 REMARK 3 L33: 1.0395 L12: 0.9657 REMARK 3 L13: 0.3409 L23: 0.1197 REMARK 3 S TENSOR REMARK 3 S11: 0.2074 S12: -0.1947 S13: -0.2469 REMARK 3 S21: 0.6093 S22: -0.1584 S23: -0.1479 REMARK 3 S31: 0.3279 S32: 0.1546 S33: -0.0291 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 130 THROUGH 275 ) REMARK 3 ORIGIN FOR THE GROUP (A): 39.4962 30.3073 -1.7406 REMARK 3 T TENSOR REMARK 3 T11: 0.1424 T22: 0.1521 REMARK 3 T33: 0.2544 T12: -0.0298 REMARK 3 T13: 0.0163 T23: -0.0386 REMARK 3 L TENSOR REMARK 3 L11: 0.9938 L22: 4.4600 REMARK 3 L33: 2.5092 L12: 0.2553 REMARK 3 L13: -0.2700 L23: -1.3468 REMARK 3 S TENSOR REMARK 3 S11: 0.0124 S12: 0.0065 S13: 0.0085 REMARK 3 S21: -0.0241 S22: -0.0511 S23: 0.5007 REMARK 3 S31: 0.0243 S32: -0.1280 S33: 0.0189 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 4 THROUGH 129 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.1784 -15.7519 3.8870 REMARK 3 T TENSOR REMARK 3 T11: 0.3497 T22: 1.0950 REMARK 3 T33: 0.5343 T12: 0.0824 REMARK 3 T13: 0.0446 T23: 0.2983 REMARK 3 L TENSOR REMARK 3 L11: 2.6329 L22: 0.2869 REMARK 3 L33: 0.6764 L12: -0.6934 REMARK 3 L13: -0.7306 L23: 0.0064 REMARK 3 S TENSOR REMARK 3 S11: 0.0267 S12: 0.6506 S13: -0.0605 REMARK 3 S21: -0.1280 S22: 0.2535 S23: 0.3648 REMARK 3 S31: -0.0725 S32: -1.2138 S33: -0.2475 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 130 THROUGH 275 ) REMARK 3 ORIGIN FOR THE GROUP (A): 26.5762 -13.6713 2.7500 REMARK 3 T TENSOR REMARK 3 T11: 0.2865 T22: 0.2023 REMARK 3 T33: 0.1490 T12: 0.0526 REMARK 3 T13: 0.0331 T23: 0.0120 REMARK 3 L TENSOR REMARK 3 L11: 3.4153 L22: 2.3215 REMARK 3 L33: 1.3763 L12: 0.4635 REMARK 3 L13: -0.0450 L23: -0.7670 REMARK 3 S TENSOR REMARK 3 S11: 0.0735 S12: -0.1367 S13: 0.1813 REMARK 3 S21: -0.0119 S22: 0.1461 S23: -0.0224 REMARK 3 S31: -0.1829 S32: -0.1486 S33: -0.1839 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GC2 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 13-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000073996. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 09-NOV-07 REMARK 200 TEMPERATURE (KELVIN) : 298.0 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : EMBL/DESY, HAMBURG REMARK 200 BEAMLINE : X13 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.8081 REMARK 200 MONOCHROMATOR : GRAPHITE REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45329 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.120 REMARK 200 RESOLUTION RANGE LOW (A) : 19.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.08100 REMARK 200 R SYM (I) : 0.08100 REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.12 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.17 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3M7H REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 61.93 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.23 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M IMIDAZOLE PH 6.5, 1.3 M SODIUM REMARK 280 ACETATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X+1/2,Y+1/2,-Z REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 74.62100 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 76.51550 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 74.62100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 76.51550 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 GLY B 3 REMARK 465 LEU B 70 REMARK 465 ARG B 71 REMARK 465 ASN B 72 REMARK 465 PHE B 276 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 71 CB CG CD NE CZ NH1 NH2 REMARK 470 LYS A 73 CD CE NZ REMARK 470 LYS A 74 CB CG CD CE NZ REMARK 470 ARG A 93 NE CZ NH1 NH2 REMARK 470 LYS A 244 CE NZ REMARK 470 LYS A 267 CG CD CE NZ REMARK 470 PHE A 276 CG CD1 CD2 CE1 CE2 CZ REMARK 470 SER B 24 OG REMARK 470 ALA B 25 CB REMARK 470 ALA B 58 CB REMARK 470 GLU B 60 CG CD OE1 OE2 REMARK 470 GLN B 61 CG CD OE1 NE2 REMARK 470 ILE B 68 CD1 REMARK 470 LYS B 73 CB CG CD CE NZ REMARK 470 LYS B 74 CB CG CD CE NZ REMARK 470 ALA B 75 CB REMARK 470 TYR B 90 CB CG CD1 CD2 CE1 CE2 CZ REMARK 470 TYR B 90 OH REMARK 470 ARG B 93 CB CG CD NE CZ NH1 NH2 REMARK 470 VAL B 95 CB CG1 CG2 REMARK 470 THR B 104 OG1 CG2 REMARK 470 ASN B 106 CB CG OD1 ND2 REMARK 470 LYS B 244 CG CD CE NZ REMARK 470 ARG B 257 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O6 NAG C 3 O HOH B 509 2.04 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 83 -72.16 61.86 REMARK 500 ASP A 270 46.69 -77.08 REMARK 500 GLN B 34 -6.66 72.28 REMARK 500 TYR B 83 -67.07 66.15 REMARK 500 ARG B 92 -158.97 -107.43 REMARK 500 ASP B 270 46.25 -80.97 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 MAN C 2 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3M7H RELATED DB: PDB REMARK 900 FREE LLPA REMARK 900 RELATED ID: 3M7J RELATED DB: PDB REMARK 900 RELATED ID: 4GC1 RELATED DB: PDB DBREF 4GC2 A 1 276 UNP Q8GEJ9 Q8GEJ9_9PSED 1 276 DBREF 4GC2 B 1 276 UNP Q8GEJ9 Q8GEJ9_9PSED 1 276 SEQRES 1 A 276 MET ALA GLY ARG THR ARG ILE PRO PHE ASN GLY VAL GLY SEQRES 2 A 276 THR SER VAL LEU PRO ALA TYR GLN THR LEU SER ALA GLY SEQRES 3 A 276 GLN TYR LEU LEU SER PRO ASN GLN ARG PHE LYS LEU LEU SEQRES 4 A 276 LEU GLN GLY ASP GLY ASN LEU VAL ILE GLN ASP ASN GLY SEQRES 5 A 276 ALA THR VAL TRP VAL ALA ASN GLU GLN GLN PRO PHE SER SEQRES 6 A 276 SER THR ILE PRO LEU ARG ASN LYS LYS ALA PRO LEU ALA SEQRES 7 A 276 PHE TYR VAL GLN TYR GLY ALA PHE LEU ASP ASP TYR SER SEQRES 8 A 276 ARG ARG ARG VAL TRP LEU THR ASP ASN SER THR PHE THR SEQRES 9 A 276 SER ASN ASP GLN TRP ASN ARG THR HIS LEU VAL LEU GLN SEQRES 10 A 276 ASP ASP GLY ASN ILE VAL LEU VAL ASP SER LEU ALA LEU SEQRES 11 A 276 TRP ASN GLY THR PRO ALA ILE PRO LEU VAL PRO GLY ALA SEQRES 12 A 276 ILE ASP SER LEU LEU LEU ALA PRO GLY SER GLU LEU VAL SEQRES 13 A 276 GLN GLY VAL VAL TYR GLY ALA GLY ALA SER LYS LEU VAL SEQRES 14 A 276 PHE GLN GLY ASP GLY ASN LEU VAL ALA TYR GLY PRO ASN SEQRES 15 A 276 GLY ALA ALA THR TRP ASN ALA GLY THR GLN GLY LYS GLY SEQRES 16 A 276 ALA VAL ARG ALA VAL PHE GLN GLY ASP GLY ASN LEU VAL SEQRES 17 A 276 VAL TYR GLY ALA GLY ASN ALA VAL LEU TRP HIS SER HIS SEQRES 18 A 276 THR GLY GLY HIS ALA SER ALA VAL LEU ARG LEU GLN ALA SEQRES 19 A 276 ASN GLY SER ILE ALA ILE LEU ASP GLU LYS PRO VAL TRP SEQRES 20 A 276 ALA ARG PHE GLY PHE GLN PRO THR TYR ARG HIS ILE ARG SEQRES 21 A 276 LYS ILE ASN PRO ASP GLN LYS PRO ILE ASP ILE TRP THR SEQRES 22 A 276 TRP HIS PHE SEQRES 1 B 276 MET ALA GLY ARG THR ARG ILE PRO PHE ASN GLY VAL GLY SEQRES 2 B 276 THR SER VAL LEU PRO ALA TYR GLN THR LEU SER ALA GLY SEQRES 3 B 276 GLN TYR LEU LEU SER PRO ASN GLN ARG PHE LYS LEU LEU SEQRES 4 B 276 LEU GLN GLY ASP GLY ASN LEU VAL ILE GLN ASP ASN GLY SEQRES 5 B 276 ALA THR VAL TRP VAL ALA ASN GLU GLN GLN PRO PHE SER SEQRES 6 B 276 SER THR ILE PRO LEU ARG ASN LYS LYS ALA PRO LEU ALA SEQRES 7 B 276 PHE TYR VAL GLN TYR GLY ALA PHE LEU ASP ASP TYR SER SEQRES 8 B 276 ARG ARG ARG VAL TRP LEU THR ASP ASN SER THR PHE THR SEQRES 9 B 276 SER ASN ASP GLN TRP ASN ARG THR HIS LEU VAL LEU GLN SEQRES 10 B 276 ASP ASP GLY ASN ILE VAL LEU VAL ASP SER LEU ALA LEU SEQRES 11 B 276 TRP ASN GLY THR PRO ALA ILE PRO LEU VAL PRO GLY ALA SEQRES 12 B 276 ILE ASP SER LEU LEU LEU ALA PRO GLY SER GLU LEU VAL SEQRES 13 B 276 GLN GLY VAL VAL TYR GLY ALA GLY ALA SER LYS LEU VAL SEQRES 14 B 276 PHE GLN GLY ASP GLY ASN LEU VAL ALA TYR GLY PRO ASN SEQRES 15 B 276 GLY ALA ALA THR TRP ASN ALA GLY THR GLN GLY LYS GLY SEQRES 16 B 276 ALA VAL ARG ALA VAL PHE GLN GLY ASP GLY ASN LEU VAL SEQRES 17 B 276 VAL TYR GLY ALA GLY ASN ALA VAL LEU TRP HIS SER HIS SEQRES 18 B 276 THR GLY GLY HIS ALA SER ALA VAL LEU ARG LEU GLN ALA SEQRES 19 B 276 ASN GLY SER ILE ALA ILE LEU ASP GLU LYS PRO VAL TRP SEQRES 20 B 276 ALA ARG PHE GLY PHE GLN PRO THR TYR ARG HIS ILE ARG SEQRES 21 B 276 LYS ILE ASN PRO ASP GLN LYS PRO ILE ASP ILE TRP THR SEQRES 22 B 276 TRP HIS PHE HET MAN C 1 12 HET MAN C 2 10 HET NAG C 3 14 HET MAN C 4 11 HET NAG C 5 14 HETNAM MAN ALPHA-D-MANNOPYRANOSE HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETSYN MAN ALPHA-D-MANNOSE; D-MANNOSE; MANNOSE HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE FORMUL 3 MAN 3(C6 H12 O6) FORMUL 3 NAG 2(C8 H15 N O6) FORMUL 4 HOH *240(H2 O) HELIX 1 1 TYR A 90 ARG A 92 5 3 HELIX 2 2 ASP A 107 ARG A 111 1 5 HELIX 3 3 ALA A 212 ASN A 214 5 3 HELIX 4 4 ASP B 107 ARG B 111 1 5 HELIX 5 5 ALA B 212 ASN B 214 5 3 SHEET 1 A 2 ILE A 7 PRO A 8 0 SHEET 2 A 2 GLN A 21 THR A 22 1 O THR A 22 N ILE A 7 SHEET 1 B 6 VAL A 16 LEU A 17 0 SHEET 2 B 6 THR A 112 LEU A 116 -1 O LEU A 114 N LEU A 17 SHEET 3 B 6 ILE A 122 ASN A 132 -1 O VAL A 123 N VAL A 115 SHEET 4 B 6 ILE A 238 ALA A 248 -1 O LYS A 244 N ASP A 126 SHEET 5 B 6 VAL A 229 LEU A 232 -1 N ARG A 231 O ALA A 239 SHEET 6 B 6 LEU A 147 LEU A 149 -1 N LEU A 147 O LEU A 232 SHEET 1 C 4 TYR A 28 LEU A 30 0 SHEET 2 C 4 PHE A 36 LEU A 40 -1 O LEU A 38 N LEU A 29 SHEET 3 C 4 LEU A 46 ASP A 50 -1 O VAL A 47 N LEU A 39 SHEET 4 C 4 ALA A 53 VAL A 57 -1 O ALA A 53 N ASP A 50 SHEET 1 D 4 SER A 65 PRO A 69 0 SHEET 2 D 4 ARG A 94 THR A 98 -1 O VAL A 95 N ILE A 68 SHEET 3 D 4 ALA A 85 ASP A 89 -1 N LEU A 87 O TRP A 96 SHEET 4 D 4 ALA A 78 VAL A 81 -1 N TYR A 80 O PHE A 86 SHEET 1 E 4 SER A 153 LEU A 155 0 SHEET 2 E 4 ARG A 198 PHE A 201 -1 O ALA A 199 N LEU A 155 SHEET 3 E 4 LEU A 207 TYR A 210 -1 O TYR A 210 N ARG A 198 SHEET 4 E 4 VAL A 216 HIS A 219 -1 O TRP A 218 N VAL A 209 SHEET 1 F 4 VAL A 160 ALA A 163 0 SHEET 2 F 4 SER A 166 PHE A 170 -1 O LEU A 168 N TYR A 161 SHEET 3 F 4 LEU A 176 TYR A 179 -1 O TYR A 179 N LYS A 167 SHEET 4 F 4 ALA A 185 ASN A 188 -1 O TRP A 187 N ALA A 178 SHEET 1 G 2 ARG A 257 ILE A 262 0 SHEET 2 G 2 PRO A 268 HIS A 275 -1 O THR A 273 N ILE A 259 SHEET 1 H 2 ILE B 7 PRO B 8 0 SHEET 2 H 2 GLN B 21 THR B 22 1 O THR B 22 N ILE B 7 SHEET 1 I 6 VAL B 16 LEU B 17 0 SHEET 2 I 6 THR B 112 LEU B 116 -1 O LEU B 114 N LEU B 17 SHEET 3 I 6 ILE B 122 ASN B 132 -1 O VAL B 125 N HIS B 113 SHEET 4 I 6 ILE B 238 ALA B 248 -1 O LYS B 244 N ASP B 126 SHEET 5 I 6 VAL B 229 LEU B 232 -1 N ARG B 231 O ALA B 239 SHEET 6 I 6 LEU B 147 LEU B 149 -1 N LEU B 147 O LEU B 232 SHEET 1 J 4 TYR B 28 LEU B 30 0 SHEET 2 J 4 PHE B 36 LEU B 40 -1 O LEU B 38 N LEU B 29 SHEET 3 J 4 LEU B 46 ASP B 50 -1 O VAL B 47 N LEU B 39 SHEET 4 J 4 ALA B 53 VAL B 57 -1 O ALA B 53 N ASP B 50 SHEET 1 K 4 SER B 65 ILE B 68 0 SHEET 2 K 4 ARG B 94 THR B 98 -1 O VAL B 95 N ILE B 68 SHEET 3 K 4 ALA B 85 ASP B 89 -1 N LEU B 87 O TRP B 96 SHEET 4 K 4 ALA B 78 VAL B 81 -1 N ALA B 78 O ASP B 88 SHEET 1 L 4 SER B 153 GLU B 154 0 SHEET 2 L 4 ARG B 198 PHE B 201 -1 O PHE B 201 N SER B 153 SHEET 3 L 4 LEU B 207 TYR B 210 -1 O TYR B 210 N ARG B 198 SHEET 4 L 4 VAL B 216 HIS B 219 -1 O TRP B 218 N VAL B 209 SHEET 1 M 4 TYR B 161 ALA B 163 0 SHEET 2 M 4 SER B 166 PHE B 170 -1 O LEU B 168 N TYR B 161 SHEET 3 M 4 LEU B 176 TYR B 179 -1 O TYR B 179 N LYS B 167 SHEET 4 M 4 ALA B 185 ASN B 188 -1 O TRP B 187 N ALA B 178 SHEET 1 N 2 HIS B 258 ILE B 262 0 SHEET 2 N 2 PRO B 268 TRP B 274 -1 O ILE B 271 N LYS B 261 LINK O3 MAN C 1 C1 MAN C 2 1555 1555 1.44 LINK O6 MAN C 1 C1 MAN C 4 1555 1555 1.44 LINK O2 MAN C 2 C1 NAG C 3 1555 1555 1.44 LINK O2 MAN C 4 C1 NAG C 5 1555 1555 1.54 CRYST1 149.242 153.031 33.946 90.00 90.00 90.00 P 21 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006701 0.000000 0.000000 0.00000 SCALE2 0.000000 0.006535 0.000000 0.00000 SCALE3 0.000000 0.000000 0.029459 0.00000