data_4GEI # _entry.id 4GEI # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.389 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4GEI pdb_00004gei 10.2210/pdb4gei/pdb RCSB RCSB074082 ? ? WWPDB D_1000074082 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-02-27 2 'Structure model' 1 1 2013-07-10 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2024-02-28 5 'Structure model' 1 4 2024-04-03 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Data collection' 4 4 'Structure model' 'Database references' 5 5 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' chem_comp_atom 3 4 'Structure model' chem_comp_bond 4 4 'Structure model' database_2 5 4 'Structure model' struct_ref_seq_dif 6 5 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_software.name' 2 4 'Structure model' '_database_2.pdbx_DOI' 3 4 'Structure model' '_database_2.pdbx_database_accession' 4 4 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4GEI _pdbx_database_status.recvd_initial_deposition_date 2012-08-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name PDB _pdbx_database_related.db_id 4GEJ _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Polekhina, G.' 1 'Kok, S.F.' 2 'Ascher, D.B.' 3 'Waltham, M.' 4 # _citation.id primary _citation.title 'Structure of the N-terminal domain of human thioredoxin-interacting protein.' _citation.journal_abbrev 'Acta Crystallogr.,Sect.D' _citation.journal_volume 69 _citation.page_first 333 _citation.page_last 344 _citation.year 2013 _citation.journal_id_ASTM ABCRE6 _citation.country DK _citation.journal_id_ISSN 0907-4449 _citation.journal_id_CSD 0766 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23519408 _citation.pdbx_database_id_DOI 10.1107/S0907444912047099 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Polekhina, G.' 1 ? primary 'Ascher, D.B.' 2 ? primary 'Kok, S.F.' 3 ? primary 'Beckham, S.' 4 ? primary 'Wilce, M.' 5 ? primary 'Waltham, M.' 6 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Thioredoxin-interacting protein' 17048.428 1 ? 'K64A, C36S, C49S, C120S' 'N-terminal domain, UNP residues 2-149' ? 2 water nat water 18.015 219 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Thioredoxin-binding protein 2, Vitamin D3 up-regulated protein 1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SNVMFKKIKSFEVVFNDPEKVYGSGERVAGRVIVEVSEVTRVKAVRILASGVAKVLWMQGSQQCAQTSEYLRYEDTLLLE DQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGSVDYWVKAFLDRPSQPTQETKKNFEVVDLV ; _entity_poly.pdbx_seq_one_letter_code_can ;SNVMFKKIKSFEVVFNDPEKVYGSGERVAGRVIVEVSEVTRVKAVRILASGVAKVLWMQGSQQCAQTSEYLRYEDTLLLE DQPTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGSVDYWVKAFLDRPSQPTQETKKNFEVVDLV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 VAL n 1 4 MET n 1 5 PHE n 1 6 LYS n 1 7 LYS n 1 8 ILE n 1 9 LYS n 1 10 SER n 1 11 PHE n 1 12 GLU n 1 13 VAL n 1 14 VAL n 1 15 PHE n 1 16 ASN n 1 17 ASP n 1 18 PRO n 1 19 GLU n 1 20 LYS n 1 21 VAL n 1 22 TYR n 1 23 GLY n 1 24 SER n 1 25 GLY n 1 26 GLU n 1 27 ARG n 1 28 VAL n 1 29 ALA n 1 30 GLY n 1 31 ARG n 1 32 VAL n 1 33 ILE n 1 34 VAL n 1 35 GLU n 1 36 VAL n 1 37 SER n 1 38 GLU n 1 39 VAL n 1 40 THR n 1 41 ARG n 1 42 VAL n 1 43 LYS n 1 44 ALA n 1 45 VAL n 1 46 ARG n 1 47 ILE n 1 48 LEU n 1 49 ALA n 1 50 SER n 1 51 GLY n 1 52 VAL n 1 53 ALA n 1 54 LYS n 1 55 VAL n 1 56 LEU n 1 57 TRP n 1 58 MET n 1 59 GLN n 1 60 GLY n 1 61 SER n 1 62 GLN n 1 63 GLN n 1 64 CYS n 1 65 ALA n 1 66 GLN n 1 67 THR n 1 68 SER n 1 69 GLU n 1 70 TYR n 1 71 LEU n 1 72 ARG n 1 73 TYR n 1 74 GLU n 1 75 ASP n 1 76 THR n 1 77 LEU n 1 78 LEU n 1 79 LEU n 1 80 GLU n 1 81 ASP n 1 82 GLN n 1 83 PRO n 1 84 THR n 1 85 GLY n 1 86 GLU n 1 87 ASN n 1 88 GLU n 1 89 MET n 1 90 VAL n 1 91 ILE n 1 92 MET n 1 93 ARG n 1 94 PRO n 1 95 GLY n 1 96 ASN n 1 97 LYS n 1 98 TYR n 1 99 GLU n 1 100 TYR n 1 101 LYS n 1 102 PHE n 1 103 GLY n 1 104 PHE n 1 105 GLU n 1 106 LEU n 1 107 PRO n 1 108 GLN n 1 109 GLY n 1 110 PRO n 1 111 LEU n 1 112 GLY n 1 113 THR n 1 114 SER n 1 115 PHE n 1 116 LYS n 1 117 GLY n 1 118 LYS n 1 119 TYR n 1 120 GLY n 1 121 SER n 1 122 VAL n 1 123 ASP n 1 124 TYR n 1 125 TRP n 1 126 VAL n 1 127 LYS n 1 128 ALA n 1 129 PHE n 1 130 LEU n 1 131 ASP n 1 132 ARG n 1 133 PRO n 1 134 SER n 1 135 GLN n 1 136 PRO n 1 137 THR n 1 138 GLN n 1 139 GLU n 1 140 THR n 1 141 LYS n 1 142 LYS n 1 143 ASN n 1 144 PHE n 1 145 GLU n 1 146 VAL n 1 147 VAL n 1 148 ASP n 1 149 LEU n 1 150 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'TXNIP, VDUP1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain EC538 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'modified pMCSG7' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 0 ? ? ? A . n A 1 2 ASN 2 1 ? ? ? A . n A 1 3 VAL 3 2 ? ? ? A . n A 1 4 MET 4 3 ? ? ? A . n A 1 5 PHE 5 4 ? ? ? A . n A 1 6 LYS 6 5 ? ? ? A . n A 1 7 LYS 7 6 6 LYS LYS A . n A 1 8 ILE 8 7 7 ILE ILE A . n A 1 9 LYS 9 8 8 LYS LYS A . n A 1 10 SER 10 9 9 SER SER A . n A 1 11 PHE 11 10 10 PHE PHE A . n A 1 12 GLU 12 11 11 GLU GLU A . n A 1 13 VAL 13 12 12 VAL VAL A . n A 1 14 VAL 14 13 13 VAL VAL A . n A 1 15 PHE 15 14 14 PHE PHE A . n A 1 16 ASN 16 15 15 ASN ASN A . n A 1 17 ASP 17 16 16 ASP ASP A . n A 1 18 PRO 18 17 17 PRO PRO A . n A 1 19 GLU 19 18 18 GLU GLU A . n A 1 20 LYS 20 19 19 LYS LYS A . n A 1 21 VAL 21 20 20 VAL VAL A . n A 1 22 TYR 22 21 21 TYR TYR A . n A 1 23 GLY 23 22 22 GLY GLY A . n A 1 24 SER 24 23 23 SER SER A . n A 1 25 GLY 25 24 24 GLY GLY A . n A 1 26 GLU 26 25 25 GLU GLU A . n A 1 27 ARG 27 26 26 ARG ARG A . n A 1 28 VAL 28 27 27 VAL VAL A . n A 1 29 ALA 29 28 28 ALA ALA A . n A 1 30 GLY 30 29 29 GLY GLY A . n A 1 31 ARG 31 30 30 ARG ARG A . n A 1 32 VAL 32 31 31 VAL VAL A . n A 1 33 ILE 33 32 32 ILE ILE A . n A 1 34 VAL 34 33 33 VAL VAL A . n A 1 35 GLU 35 34 34 GLU GLU A . n A 1 36 VAL 36 35 35 VAL VAL A . n A 1 37 SER 37 36 36 SER SER A . n A 1 38 GLU 38 37 37 GLU GLU A . n A 1 39 VAL 39 38 38 VAL VAL A . n A 1 40 THR 40 39 39 THR THR A . n A 1 41 ARG 41 40 40 ARG ARG A . n A 1 42 VAL 42 41 41 VAL VAL A . n A 1 43 LYS 43 42 42 LYS LYS A . n A 1 44 ALA 44 43 43 ALA ALA A . n A 1 45 VAL 45 44 44 VAL VAL A . n A 1 46 ARG 46 45 45 ARG ARG A . n A 1 47 ILE 47 46 46 ILE ILE A . n A 1 48 LEU 48 47 47 LEU LEU A . n A 1 49 ALA 49 48 48 ALA ALA A . n A 1 50 SER 50 49 49 SER SER A . n A 1 51 GLY 51 50 50 GLY GLY A . n A 1 52 VAL 52 51 51 VAL VAL A . n A 1 53 ALA 53 52 52 ALA ALA A . n A 1 54 LYS 54 53 53 LYS LYS A . n A 1 55 VAL 55 54 54 VAL VAL A . n A 1 56 LEU 56 55 55 LEU LEU A . n A 1 57 TRP 57 56 56 TRP TRP A . n A 1 58 MET 58 57 57 MET MET A . n A 1 59 GLN 59 58 58 GLN GLN A . n A 1 60 GLY 60 59 59 GLY GLY A . n A 1 61 SER 61 60 60 SER SER A . n A 1 62 GLN 62 61 61 GLN GLN A . n A 1 63 GLN 63 62 62 GLN GLN A . n A 1 64 CYS 64 63 63 CYS CYS A . n A 1 65 ALA 65 64 64 ALA ALA A . n A 1 66 GLN 66 65 65 GLN GLN A . n A 1 67 THR 67 66 66 THR THR A . n A 1 68 SER 68 67 67 SER SER A . n A 1 69 GLU 69 68 68 GLU GLU A . n A 1 70 TYR 70 69 69 TYR TYR A . n A 1 71 LEU 71 70 70 LEU LEU A . n A 1 72 ARG 72 71 71 ARG ARG A . n A 1 73 TYR 73 72 72 TYR TYR A . n A 1 74 GLU 74 73 73 GLU GLU A . n A 1 75 ASP 75 74 74 ASP ASP A . n A 1 76 THR 76 75 75 THR THR A . n A 1 77 LEU 77 76 76 LEU LEU A . n A 1 78 LEU 78 77 77 LEU LEU A . n A 1 79 LEU 79 78 78 LEU LEU A . n A 1 80 GLU 80 79 79 GLU GLU A . n A 1 81 ASP 81 80 80 ASP ASP A . n A 1 82 GLN 82 81 81 GLN GLN A . n A 1 83 PRO 83 82 82 PRO PRO A . n A 1 84 THR 84 83 83 THR THR A . n A 1 85 GLY 85 84 84 GLY GLY A . n A 1 86 GLU 86 85 85 GLU GLU A . n A 1 87 ASN 87 86 86 ASN ASN A . n A 1 88 GLU 88 87 87 GLU GLU A . n A 1 89 MET 89 88 88 MET MET A . n A 1 90 VAL 90 89 89 VAL VAL A . n A 1 91 ILE 91 90 90 ILE ILE A . n A 1 92 MET 92 91 91 MET MET A . n A 1 93 ARG 93 92 92 ARG ARG A . n A 1 94 PRO 94 93 93 PRO PRO A . n A 1 95 GLY 95 94 94 GLY GLY A . n A 1 96 ASN 96 95 95 ASN ASN A . n A 1 97 LYS 97 96 96 LYS LYS A . n A 1 98 TYR 98 97 97 TYR TYR A . n A 1 99 GLU 99 98 98 GLU GLU A . n A 1 100 TYR 100 99 99 TYR TYR A . n A 1 101 LYS 101 100 100 LYS LYS A . n A 1 102 PHE 102 101 101 PHE PHE A . n A 1 103 GLY 103 102 102 GLY GLY A . n A 1 104 PHE 104 103 103 PHE PHE A . n A 1 105 GLU 105 104 104 GLU GLU A . n A 1 106 LEU 106 105 105 LEU LEU A . n A 1 107 PRO 107 106 106 PRO PRO A . n A 1 108 GLN 108 107 107 GLN GLN A . n A 1 109 GLY 109 108 108 GLY GLY A . n A 1 110 PRO 110 109 109 PRO PRO A . n A 1 111 LEU 111 110 110 LEU LEU A . n A 1 112 GLY 112 111 111 GLY GLY A . n A 1 113 THR 113 112 112 THR THR A . n A 1 114 SER 114 113 113 SER SER A . n A 1 115 PHE 115 114 114 PHE PHE A . n A 1 116 LYS 116 115 115 LYS LYS A . n A 1 117 GLY 117 116 116 GLY GLY A . n A 1 118 LYS 118 117 117 LYS LYS A . n A 1 119 TYR 119 118 118 TYR TYR A . n A 1 120 GLY 120 119 119 GLY GLY A . n A 1 121 SER 121 120 120 SER SER A . n A 1 122 VAL 122 121 121 VAL VAL A . n A 1 123 ASP 123 122 122 ASP ASP A . n A 1 124 TYR 124 123 123 TYR TYR A . n A 1 125 TRP 125 124 124 TRP TRP A . n A 1 126 VAL 126 125 125 VAL VAL A . n A 1 127 LYS 127 126 126 LYS LYS A . n A 1 128 ALA 128 127 127 ALA ALA A . n A 1 129 PHE 129 128 128 PHE PHE A . n A 1 130 LEU 130 129 129 LEU LEU A . n A 1 131 ASP 131 130 130 ASP ASP A . n A 1 132 ARG 132 131 131 ARG ARG A . n A 1 133 PRO 133 132 132 PRO PRO A . n A 1 134 SER 134 133 133 SER SER A . n A 1 135 GLN 135 134 134 GLN GLN A . n A 1 136 PRO 136 135 135 PRO PRO A . n A 1 137 THR 137 136 136 THR THR A . n A 1 138 GLN 138 137 137 GLN GLN A . n A 1 139 GLU 139 138 138 GLU GLU A . n A 1 140 THR 140 139 139 THR THR A . n A 1 141 LYS 141 140 140 LYS LYS A . n A 1 142 LYS 142 141 141 LYS LYS A . n A 1 143 ASN 143 142 142 ASN ASN A . n A 1 144 PHE 144 143 143 PHE PHE A . n A 1 145 GLU 145 144 144 GLU GLU A . n A 1 146 VAL 146 145 145 VAL VAL A . n A 1 147 VAL 147 146 146 VAL VAL A . n A 1 148 ASP 148 147 147 ASP ASP A . n A 1 149 LEU 149 148 148 LEU LEU A . n A 1 150 VAL 150 149 149 VAL VAL A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 1 HOH HOH A . B 2 HOH 2 202 2 HOH HOH A . B 2 HOH 3 203 3 HOH HOH A . B 2 HOH 4 204 4 HOH HOH A . B 2 HOH 5 205 5 HOH HOH A . B 2 HOH 6 206 6 HOH HOH A . B 2 HOH 7 207 7 HOH HOH A . B 2 HOH 8 208 8 HOH HOH A . B 2 HOH 9 209 9 HOH HOH A . B 2 HOH 10 210 10 HOH HOH A . B 2 HOH 11 211 11 HOH HOH A . B 2 HOH 12 212 12 HOH HOH A . B 2 HOH 13 213 13 HOH HOH A . B 2 HOH 14 214 14 HOH HOH A . B 2 HOH 15 215 15 HOH HOH A . B 2 HOH 16 216 16 HOH HOH A . B 2 HOH 17 217 17 HOH HOH A . B 2 HOH 18 218 18 HOH HOH A . B 2 HOH 19 219 19 HOH HOH A . B 2 HOH 20 220 20 HOH HOH A . B 2 HOH 21 221 21 HOH HOH A . B 2 HOH 22 222 22 HOH HOH A . B 2 HOH 23 223 23 HOH HOH A . B 2 HOH 24 224 24 HOH HOH A . B 2 HOH 25 225 25 HOH HOH A . B 2 HOH 26 226 26 HOH HOH A . B 2 HOH 27 227 27 HOH HOH A . B 2 HOH 28 228 28 HOH HOH A . B 2 HOH 29 229 29 HOH HOH A . B 2 HOH 30 230 30 HOH HOH A . B 2 HOH 31 231 31 HOH HOH A . B 2 HOH 32 232 32 HOH HOH A . B 2 HOH 33 233 33 HOH HOH A . B 2 HOH 34 234 34 HOH HOH A . B 2 HOH 35 235 35 HOH HOH A . B 2 HOH 36 236 36 HOH HOH A . B 2 HOH 37 237 37 HOH HOH A . B 2 HOH 38 238 38 HOH HOH A . B 2 HOH 39 239 39 HOH HOH A . B 2 HOH 40 240 40 HOH HOH A . B 2 HOH 41 241 41 HOH HOH A . B 2 HOH 42 242 42 HOH HOH A . B 2 HOH 43 243 43 HOH HOH A . B 2 HOH 44 244 44 HOH HOH A . B 2 HOH 45 245 45 HOH HOH A . B 2 HOH 46 246 46 HOH HOH A . B 2 HOH 47 247 47 HOH HOH A . B 2 HOH 48 248 48 HOH HOH A . B 2 HOH 49 249 49 HOH HOH A . B 2 HOH 50 250 50 HOH HOH A . B 2 HOH 51 251 51 HOH HOH A . B 2 HOH 52 252 52 HOH HOH A . B 2 HOH 53 253 53 HOH HOH A . B 2 HOH 54 254 54 HOH HOH A . B 2 HOH 55 255 55 HOH HOH A . B 2 HOH 56 256 56 HOH HOH A . B 2 HOH 57 257 57 HOH HOH A . B 2 HOH 58 258 58 HOH HOH A . B 2 HOH 59 259 59 HOH HOH A . B 2 HOH 60 260 60 HOH HOH A . B 2 HOH 61 261 61 HOH HOH A . B 2 HOH 62 262 62 HOH HOH A . B 2 HOH 63 263 63 HOH HOH A . B 2 HOH 64 264 64 HOH HOH A . B 2 HOH 65 265 65 HOH HOH A . B 2 HOH 66 266 66 HOH HOH A . B 2 HOH 67 267 67 HOH HOH A . B 2 HOH 68 268 68 HOH HOH A . B 2 HOH 69 269 69 HOH HOH A . B 2 HOH 70 270 70 HOH HOH A . B 2 HOH 71 271 71 HOH HOH A . B 2 HOH 72 272 72 HOH HOH A . B 2 HOH 73 273 73 HOH HOH A . B 2 HOH 74 274 74 HOH HOH A . B 2 HOH 75 275 75 HOH HOH A . B 2 HOH 76 276 76 HOH HOH A . B 2 HOH 77 277 77 HOH HOH A . B 2 HOH 78 278 78 HOH HOH A . B 2 HOH 79 279 79 HOH HOH A . B 2 HOH 80 280 80 HOH HOH A . B 2 HOH 81 281 81 HOH HOH A . B 2 HOH 82 282 82 HOH HOH A . B 2 HOH 83 283 83 HOH HOH A . B 2 HOH 84 284 84 HOH HOH A . B 2 HOH 85 285 85 HOH HOH A . B 2 HOH 86 286 86 HOH HOH A . B 2 HOH 87 287 87 HOH HOH A . B 2 HOH 88 288 88 HOH HOH A . B 2 HOH 89 289 89 HOH HOH A . B 2 HOH 90 290 90 HOH HOH A . B 2 HOH 91 291 91 HOH HOH A . B 2 HOH 92 292 92 HOH HOH A . B 2 HOH 93 293 93 HOH HOH A . B 2 HOH 94 294 94 HOH HOH A . B 2 HOH 95 295 95 HOH HOH A . B 2 HOH 96 296 96 HOH HOH A . B 2 HOH 97 297 97 HOH HOH A . B 2 HOH 98 298 98 HOH HOH A . B 2 HOH 99 299 99 HOH HOH A . B 2 HOH 100 300 100 HOH HOH A . B 2 HOH 101 301 101 HOH HOH A . B 2 HOH 102 302 102 HOH HOH A . B 2 HOH 103 303 103 HOH HOH A . B 2 HOH 104 304 104 HOH HOH A . B 2 HOH 105 305 105 HOH HOH A . B 2 HOH 106 306 106 HOH HOH A . B 2 HOH 107 307 107 HOH HOH A . B 2 HOH 108 308 108 HOH HOH A . B 2 HOH 109 309 109 HOH HOH A . B 2 HOH 110 310 110 HOH HOH A . B 2 HOH 111 311 111 HOH HOH A . B 2 HOH 112 312 112 HOH HOH A . B 2 HOH 113 313 113 HOH HOH A . B 2 HOH 114 314 114 HOH HOH A . B 2 HOH 115 315 115 HOH HOH A . B 2 HOH 116 316 116 HOH HOH A . B 2 HOH 117 317 117 HOH HOH A . B 2 HOH 118 318 118 HOH HOH A . B 2 HOH 119 319 119 HOH HOH A . B 2 HOH 120 320 120 HOH HOH A . B 2 HOH 121 321 121 HOH HOH A . B 2 HOH 122 322 122 HOH HOH A . B 2 HOH 123 323 123 HOH HOH A . B 2 HOH 124 324 124 HOH HOH A . B 2 HOH 125 325 125 HOH HOH A . B 2 HOH 126 326 126 HOH HOH A . B 2 HOH 127 327 127 HOH HOH A . B 2 HOH 128 328 128 HOH HOH A . B 2 HOH 129 329 129 HOH HOH A . B 2 HOH 130 330 130 HOH HOH A . B 2 HOH 131 331 131 HOH HOH A . B 2 HOH 132 332 132 HOH HOH A . B 2 HOH 133 333 133 HOH HOH A . B 2 HOH 134 334 134 HOH HOH A . B 2 HOH 135 335 135 HOH HOH A . B 2 HOH 136 336 136 HOH HOH A . B 2 HOH 137 337 137 HOH HOH A . B 2 HOH 138 338 138 HOH HOH A . B 2 HOH 139 339 139 HOH HOH A . B 2 HOH 140 340 140 HOH HOH A . B 2 HOH 141 341 141 HOH HOH A . B 2 HOH 142 342 142 HOH HOH A . B 2 HOH 143 343 143 HOH HOH A . B 2 HOH 144 344 144 HOH HOH A . B 2 HOH 145 345 145 HOH HOH A . B 2 HOH 146 346 146 HOH HOH A . B 2 HOH 147 347 147 HOH HOH A . B 2 HOH 148 348 148 HOH HOH A . B 2 HOH 149 349 149 HOH HOH A . B 2 HOH 150 350 150 HOH HOH A . B 2 HOH 151 351 151 HOH HOH A . B 2 HOH 152 352 152 HOH HOH A . B 2 HOH 153 353 153 HOH HOH A . B 2 HOH 154 354 154 HOH HOH A . B 2 HOH 155 355 155 HOH HOH A . B 2 HOH 156 356 156 HOH HOH A . B 2 HOH 157 357 157 HOH HOH A . B 2 HOH 158 358 158 HOH HOH A . B 2 HOH 159 359 159 HOH HOH A . B 2 HOH 160 360 160 HOH HOH A . B 2 HOH 161 361 161 HOH HOH A . B 2 HOH 162 362 162 HOH HOH A . B 2 HOH 163 363 163 HOH HOH A . B 2 HOH 164 364 164 HOH HOH A . B 2 HOH 165 365 165 HOH HOH A . B 2 HOH 166 366 166 HOH HOH A . B 2 HOH 167 367 167 HOH HOH A . B 2 HOH 168 368 168 HOH HOH A . B 2 HOH 169 369 169 HOH HOH A . B 2 HOH 170 370 170 HOH HOH A . B 2 HOH 171 371 171 HOH HOH A . B 2 HOH 172 372 172 HOH HOH A . B 2 HOH 173 373 173 HOH HOH A . B 2 HOH 174 374 174 HOH HOH A . B 2 HOH 175 375 175 HOH HOH A . B 2 HOH 176 376 176 HOH HOH A . B 2 HOH 177 377 177 HOH HOH A . B 2 HOH 178 378 178 HOH HOH A . B 2 HOH 179 379 179 HOH HOH A . B 2 HOH 180 380 180 HOH HOH A . B 2 HOH 181 381 181 HOH HOH A . B 2 HOH 182 382 182 HOH HOH A . B 2 HOH 183 383 183 HOH HOH A . B 2 HOH 184 384 184 HOH HOH A . B 2 HOH 185 385 185 HOH HOH A . B 2 HOH 186 386 186 HOH HOH A . B 2 HOH 187 387 187 HOH HOH A . B 2 HOH 188 388 188 HOH HOH A . B 2 HOH 189 389 189 HOH HOH A . B 2 HOH 190 390 190 HOH HOH A . B 2 HOH 191 391 191 HOH HOH A . B 2 HOH 192 392 192 HOH HOH A . B 2 HOH 193 393 193 HOH HOH A . B 2 HOH 194 394 194 HOH HOH A . B 2 HOH 195 395 195 HOH HOH A . B 2 HOH 196 396 196 HOH HOH A . B 2 HOH 197 397 197 HOH HOH A . B 2 HOH 198 398 198 HOH HOH A . B 2 HOH 199 399 199 HOH HOH A . B 2 HOH 200 400 200 HOH HOH A . B 2 HOH 201 401 201 HOH HOH A . B 2 HOH 202 402 202 HOH HOH A . B 2 HOH 203 403 203 HOH HOH A . B 2 HOH 204 404 204 HOH HOH A . B 2 HOH 205 405 205 HOH HOH A . B 2 HOH 206 406 206 HOH HOH A . B 2 HOH 207 407 207 HOH HOH A . B 2 HOH 208 408 208 HOH HOH A . B 2 HOH 209 409 209 HOH HOH A . B 2 HOH 210 410 210 HOH HOH A . B 2 HOH 211 411 211 HOH HOH A . B 2 HOH 212 412 212 HOH HOH A . B 2 HOH 213 413 213 HOH HOH A . B 2 HOH 214 414 214 HOH HOH A . B 2 HOH 215 415 215 HOH HOH A . B 2 HOH 216 416 216 HOH HOH A . B 2 HOH 217 417 217 HOH HOH A . B 2 HOH 218 418 218 HOH HOH A . B 2 HOH 219 419 219 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' . ? 1 PHENIX 'model building' . ? 2 REFMAC refinement 5.6.0117 ? 3 MOSFLM 'data reduction' . ? 4 SCALA 'data scaling' . ? 5 PHENIX phasing . ? 6 # _cell.entry_id 4GEI _cell.length_a 98.250 _cell.length_b 76.280 _cell.length_c 31.030 _cell.angle_alpha 90.00 _cell.angle_beta 92.65 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4GEI _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4GEI _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.41 _exptl_crystal.density_percent_sol 63.89 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method batch _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.15 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '25mM Hepes, 1 mM DTT, pH 7.15, batch, temperature 277K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-02-19 _diffrn_detector.details mirrows # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'silicon double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9537 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'AUSTRALIAN SYNCHROTRON BEAMLINE MX2' _diffrn_source.pdbx_synchrotron_site 'Australian Synchrotron' _diffrn_source.pdbx_synchrotron_beamline MX2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9537 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4GEI _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 38.0 _reflns.d_resolution_high 1.5 _reflns.number_obs 36857 _reflns.number_all ? _reflns.percent_possible_obs 99.8 _reflns.pdbx_Rmerge_I_obs 0.062 _reflns.pdbx_Rsym_value 0.062 _reflns.pdbx_netI_over_sigmaI 16.7 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 7.2 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 1.5 _reflns_shell.d_res_low 1.58 _reflns_shell.percent_possible_all 99.2 _reflns_shell.Rmerge_I_obs 0.672 _reflns_shell.pdbx_Rsym_value 0.672 _reflns_shell.meanI_over_sigI_obs 2.6 _reflns_shell.pdbx_redundancy 7.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4GEI _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 32902 _refine.ls_number_reflns_all 36955 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F . _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 30.13 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 99.79 _refine.ls_R_factor_obs 0.18198 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.17958 _refine.ls_R_factor_R_free 0.20328 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 9.9 _refine.ls_number_reflns_R_free 3619 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.968 _refine.correlation_coeff_Fo_to_Fc_free 0.957 _refine.B_iso_mean 25.770 _refine.aniso_B[1][1] -0.90 _refine.aniso_B[2][2] 1.13 _refine.aniso_B[3][3] -0.22 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] -0.28 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model 'A MODEL OBTAINED FROM EXPERIMENTAL PHASING BY SAD USING PT SOAKED CRYSTALS' _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model isotropic _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.067 _refine.pdbx_overall_ESU_R_Free 0.068 _refine.overall_SU_ML 0.042 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.102 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_analyze.entry_id 4GEI _refine_analyze.Luzzati_coordinate_error_obs 0.164 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1151 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 219 _refine_hist.number_atoms_total 1370 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 30.13 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.015 0.020 ? 1362 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.817 1.978 ? 1864 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 8.850 5.000 ? 184 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 36.629 25.000 ? 66 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 15.883 15.000 ? 256 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 22.727 15.000 ? 8 'X-RAY DIFFRACTION' ? r_chiral_restr 0.160 0.200 ? 198 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.009 0.021 ? 1069 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.500 _refine_ls_shell.d_res_low 1.539 _refine_ls_shell.number_reflns_R_work 2415 _refine_ls_shell.R_factor_R_work 0.350 _refine_ls_shell.percent_reflns_obs 99.48 _refine_ls_shell.R_factor_R_free 0.347 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 275 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 4GEI _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4GEI _struct.title 'N-terminal domain of VDUP-1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GEI _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'alpha-arrestin, oxidative stress, metabolism, thioredoxin, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code TXNIP_HUMAN _struct_ref.pdbx_db_accession Q9H3M7 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;VMFKKIKSFEVVFNDPEKVYGSGEKVAGRVIVEVCEVTRVKAVRILACGVAKVLWMQGSQQCKQTSEYLRYEDTLLLEDQ PTGENEMVIMRPGNKYEYKFGFELPQGPLGTSFKGKYGCVDYWVKAFLDRPSQPTQETKKNFEVVDLV ; _struct_ref.pdbx_align_begin 2 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4GEI _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 3 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 150 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9H3M7 _struct_ref_seq.db_align_beg 2 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 149 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 2 _struct_ref_seq.pdbx_auth_seq_align_end 149 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4GEI SER A 1 ? UNP Q9H3M7 ? ? 'expression tag' 0 1 1 4GEI ASN A 2 ? UNP Q9H3M7 ? ? 'expression tag' 1 2 1 4GEI ARG A 27 ? UNP Q9H3M7 LYS 26 'SEE REMARK 999' 26 3 1 4GEI SER A 37 ? UNP Q9H3M7 CYS 36 'engineered mutation' 36 4 1 4GEI SER A 50 ? UNP Q9H3M7 CYS 49 'engineered mutation' 49 5 1 4GEI ALA A 65 ? UNP Q9H3M7 LYS 64 'engineered mutation' 64 6 1 4GEI SER A 121 ? UNP Q9H3M7 CYS 120 'engineered mutation' 120 7 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 2 ? C ? 2 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? parallel C 1 2 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 SER A 10 ? PHE A 15 ? SER A 9 PHE A 14 A 2 ARG A 27 ? GLU A 35 ? ARG A 26 GLU A 34 A 3 TYR A 98 ? GLU A 105 ? TYR A 97 GLU A 104 B 1 VAL A 21 ? GLY A 23 ? VAL A 20 GLY A 22 B 2 GLU A 145 ? VAL A 147 ? GLU A 144 VAL A 146 C 1 THR A 40 ? VAL A 42 ? THR A 39 VAL A 41 C 2 VAL A 90 ? MET A 92 ? VAL A 89 MET A 91 D 1 GLN A 62 ? LEU A 77 ? GLN A 61 LEU A 76 D 2 ALA A 44 ? GLN A 59 ? ALA A 43 GLN A 58 D 3 TYR A 119 ? ASP A 131 ? TYR A 118 ASP A 130 D 4 GLN A 138 ? ASN A 143 ? GLN A 137 ASN A 142 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 14 ? N VAL A 13 O ARG A 31 ? O ARG A 30 A 2 3 N VAL A 28 ? N VAL A 27 O PHE A 104 ? O PHE A 103 B 1 2 N TYR A 22 ? N TYR A 21 O GLU A 145 ? O GLU A 144 C 1 2 N THR A 40 ? N THR A 39 O MET A 92 ? O MET A 91 D 1 2 O CYS A 64 ? O CYS A 63 N TRP A 57 ? N TRP A 56 D 2 3 N LEU A 48 ? N LEU A 47 O LYS A 127 ? O LYS A 126 D 3 4 N LEU A 130 ? N LEU A 129 O GLN A 138 ? O GLN A 137 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 409 ? ? O A HOH 410 ? ? 1.60 2 1 O A HOH 380 ? ? O A HOH 414 ? ? 1.68 3 1 O A HOH 411 ? ? O A HOH 412 ? ? 1.82 4 1 NE A ARG 92 ? ? O A HOH 419 ? ? 1.84 5 1 O A HOH 370 ? ? O A HOH 417 ? ? 1.93 6 1 OG A SER 133 ? B O A HOH 201 ? ? 1.95 7 1 O A HOH 245 ? ? O A HOH 286 ? ? 1.97 8 1 O A HOH 368 ? ? O A HOH 414 ? ? 2.13 9 1 O A PRO 132 ? ? O A HOH 411 ? ? 2.14 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O A HOH 315 ? ? 1_555 O A HOH 409 ? ? 2_655 2.16 2 1 O A VAL 149 ? ? 1_555 O A HOH 419 ? ? 4_545 2.19 3 1 OXT A VAL 149 ? ? 1_555 O A HOH 419 ? ? 4_545 2.19 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 NE _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 ARG _pdbx_validate_rmsd_angle.auth_seq_id_1 40 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CZ _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 ARG _pdbx_validate_rmsd_angle.auth_seq_id_2 40 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 NH1 _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 ARG _pdbx_validate_rmsd_angle.auth_seq_id_3 40 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 116.64 _pdbx_validate_rmsd_angle.angle_target_value 120.30 _pdbx_validate_rmsd_angle.angle_deviation -3.66 _pdbx_validate_rmsd_angle.angle_standard_deviation 0.50 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 80 ? A -94.11 -70.44 2 1 ASP A 80 ? B -51.82 -115.07 3 1 GLN A 81 ? B 50.42 96.72 4 1 THR A 83 ? ? -48.98 -173.32 5 1 LYS A 115 ? B -116.80 -81.53 # _pdbx_entry_details.entry_id 4GEI _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'K26R SEQUENCE CONFLICT IN UNP ENTRY Q9H3M7' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 0 ? A SER 1 2 1 Y 1 A ASN 1 ? A ASN 2 3 1 Y 1 A VAL 2 ? A VAL 3 4 1 Y 1 A MET 3 ? A MET 4 5 1 Y 1 A PHE 4 ? A PHE 5 6 1 Y 1 A LYS 5 ? A LYS 6 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 GLN N N N N 88 GLN CA C N S 89 GLN C C N N 90 GLN O O N N 91 GLN CB C N N 92 GLN CG C N N 93 GLN CD C N N 94 GLN OE1 O N N 95 GLN NE2 N N N 96 GLN OXT O N N 97 GLN H H N N 98 GLN H2 H N N 99 GLN HA H N N 100 GLN HB2 H N N 101 GLN HB3 H N N 102 GLN HG2 H N N 103 GLN HG3 H N N 104 GLN HE21 H N N 105 GLN HE22 H N N 106 GLN HXT H N N 107 GLU N N N N 108 GLU CA C N S 109 GLU C C N N 110 GLU O O N N 111 GLU CB C N N 112 GLU CG C N N 113 GLU CD C N N 114 GLU OE1 O N N 115 GLU OE2 O N N 116 GLU OXT O N N 117 GLU H H N N 118 GLU H2 H N N 119 GLU HA H N N 120 GLU HB2 H N N 121 GLU HB3 H N N 122 GLU HG2 H N N 123 GLU HG3 H N N 124 GLU HE2 H N N 125 GLU HXT H N N 126 GLY N N N N 127 GLY CA C N N 128 GLY C C N N 129 GLY O O N N 130 GLY OXT O N N 131 GLY H H N N 132 GLY H2 H N N 133 GLY HA2 H N N 134 GLY HA3 H N N 135 GLY HXT H N N 136 HOH O O N N 137 HOH H1 H N N 138 HOH H2 H N N 139 ILE N N N N 140 ILE CA C N S 141 ILE C C N N 142 ILE O O N N 143 ILE CB C N S 144 ILE CG1 C N N 145 ILE CG2 C N N 146 ILE CD1 C N N 147 ILE OXT O N N 148 ILE H H N N 149 ILE H2 H N N 150 ILE HA H N N 151 ILE HB H N N 152 ILE HG12 H N N 153 ILE HG13 H N N 154 ILE HG21 H N N 155 ILE HG22 H N N 156 ILE HG23 H N N 157 ILE HD11 H N N 158 ILE HD12 H N N 159 ILE HD13 H N N 160 ILE HXT H N N 161 LEU N N N N 162 LEU CA C N S 163 LEU C C N N 164 LEU O O N N 165 LEU CB C N N 166 LEU CG C N N 167 LEU CD1 C N N 168 LEU CD2 C N N 169 LEU OXT O N N 170 LEU H H N N 171 LEU H2 H N N 172 LEU HA H N N 173 LEU HB2 H N N 174 LEU HB3 H N N 175 LEU HG H N N 176 LEU HD11 H N N 177 LEU HD12 H N N 178 LEU HD13 H N N 179 LEU HD21 H N N 180 LEU HD22 H N N 181 LEU HD23 H N N 182 LEU HXT H N N 183 LYS N N N N 184 LYS CA C N S 185 LYS C C N N 186 LYS O O N N 187 LYS CB C N N 188 LYS CG C N N 189 LYS CD C N N 190 LYS CE C N N 191 LYS NZ N N N 192 LYS OXT O N N 193 LYS H H N N 194 LYS H2 H N N 195 LYS HA H N N 196 LYS HB2 H N N 197 LYS HB3 H N N 198 LYS HG2 H N N 199 LYS HG3 H N N 200 LYS HD2 H N N 201 LYS HD3 H N N 202 LYS HE2 H N N 203 LYS HE3 H N N 204 LYS HZ1 H N N 205 LYS HZ2 H N N 206 LYS HZ3 H N N 207 LYS HXT H N N 208 MET N N N N 209 MET CA C N S 210 MET C C N N 211 MET O O N N 212 MET CB C N N 213 MET CG C N N 214 MET SD S N N 215 MET CE C N N 216 MET OXT O N N 217 MET H H N N 218 MET H2 H N N 219 MET HA H N N 220 MET HB2 H N N 221 MET HB3 H N N 222 MET HG2 H N N 223 MET HG3 H N N 224 MET HE1 H N N 225 MET HE2 H N N 226 MET HE3 H N N 227 MET HXT H N N 228 PHE N N N N 229 PHE CA C N S 230 PHE C C N N 231 PHE O O N N 232 PHE CB C N N 233 PHE CG C Y N 234 PHE CD1 C Y N 235 PHE CD2 C Y N 236 PHE CE1 C Y N 237 PHE CE2 C Y N 238 PHE CZ C Y N 239 PHE OXT O N N 240 PHE H H N N 241 PHE H2 H N N 242 PHE HA H N N 243 PHE HB2 H N N 244 PHE HB3 H N N 245 PHE HD1 H N N 246 PHE HD2 H N N 247 PHE HE1 H N N 248 PHE HE2 H N N 249 PHE HZ H N N 250 PHE HXT H N N 251 PRO N N N N 252 PRO CA C N S 253 PRO C C N N 254 PRO O O N N 255 PRO CB C N N 256 PRO CG C N N 257 PRO CD C N N 258 PRO OXT O N N 259 PRO H H N N 260 PRO HA H N N 261 PRO HB2 H N N 262 PRO HB3 H N N 263 PRO HG2 H N N 264 PRO HG3 H N N 265 PRO HD2 H N N 266 PRO HD3 H N N 267 PRO HXT H N N 268 SER N N N N 269 SER CA C N S 270 SER C C N N 271 SER O O N N 272 SER CB C N N 273 SER OG O N N 274 SER OXT O N N 275 SER H H N N 276 SER H2 H N N 277 SER HA H N N 278 SER HB2 H N N 279 SER HB3 H N N 280 SER HG H N N 281 SER HXT H N N 282 THR N N N N 283 THR CA C N S 284 THR C C N N 285 THR O O N N 286 THR CB C N R 287 THR OG1 O N N 288 THR CG2 C N N 289 THR OXT O N N 290 THR H H N N 291 THR H2 H N N 292 THR HA H N N 293 THR HB H N N 294 THR HG1 H N N 295 THR HG21 H N N 296 THR HG22 H N N 297 THR HG23 H N N 298 THR HXT H N N 299 TRP N N N N 300 TRP CA C N S 301 TRP C C N N 302 TRP O O N N 303 TRP CB C N N 304 TRP CG C Y N 305 TRP CD1 C Y N 306 TRP CD2 C Y N 307 TRP NE1 N Y N 308 TRP CE2 C Y N 309 TRP CE3 C Y N 310 TRP CZ2 C Y N 311 TRP CZ3 C Y N 312 TRP CH2 C Y N 313 TRP OXT O N N 314 TRP H H N N 315 TRP H2 H N N 316 TRP HA H N N 317 TRP HB2 H N N 318 TRP HB3 H N N 319 TRP HD1 H N N 320 TRP HE1 H N N 321 TRP HE3 H N N 322 TRP HZ2 H N N 323 TRP HZ3 H N N 324 TRP HH2 H N N 325 TRP HXT H N N 326 TYR N N N N 327 TYR CA C N S 328 TYR C C N N 329 TYR O O N N 330 TYR CB C N N 331 TYR CG C Y N 332 TYR CD1 C Y N 333 TYR CD2 C Y N 334 TYR CE1 C Y N 335 TYR CE2 C Y N 336 TYR CZ C Y N 337 TYR OH O N N 338 TYR OXT O N N 339 TYR H H N N 340 TYR H2 H N N 341 TYR HA H N N 342 TYR HB2 H N N 343 TYR HB3 H N N 344 TYR HD1 H N N 345 TYR HD2 H N N 346 TYR HE1 H N N 347 TYR HE2 H N N 348 TYR HH H N N 349 TYR HXT H N N 350 VAL N N N N 351 VAL CA C N S 352 VAL C C N N 353 VAL O O N N 354 VAL CB C N N 355 VAL CG1 C N N 356 VAL CG2 C N N 357 VAL OXT O N N 358 VAL H H N N 359 VAL H2 H N N 360 VAL HA H N N 361 VAL HB H N N 362 VAL HG11 H N N 363 VAL HG12 H N N 364 VAL HG13 H N N 365 VAL HG21 H N N 366 VAL HG22 H N N 367 VAL HG23 H N N 368 VAL HXT H N N 369 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HOH O H1 sing N N 129 HOH O H2 sing N N 130 ILE N CA sing N N 131 ILE N H sing N N 132 ILE N H2 sing N N 133 ILE CA C sing N N 134 ILE CA CB sing N N 135 ILE CA HA sing N N 136 ILE C O doub N N 137 ILE C OXT sing N N 138 ILE CB CG1 sing N N 139 ILE CB CG2 sing N N 140 ILE CB HB sing N N 141 ILE CG1 CD1 sing N N 142 ILE CG1 HG12 sing N N 143 ILE CG1 HG13 sing N N 144 ILE CG2 HG21 sing N N 145 ILE CG2 HG22 sing N N 146 ILE CG2 HG23 sing N N 147 ILE CD1 HD11 sing N N 148 ILE CD1 HD12 sing N N 149 ILE CD1 HD13 sing N N 150 ILE OXT HXT sing N N 151 LEU N CA sing N N 152 LEU N H sing N N 153 LEU N H2 sing N N 154 LEU CA C sing N N 155 LEU CA CB sing N N 156 LEU CA HA sing N N 157 LEU C O doub N N 158 LEU C OXT sing N N 159 LEU CB CG sing N N 160 LEU CB HB2 sing N N 161 LEU CB HB3 sing N N 162 LEU CG CD1 sing N N 163 LEU CG CD2 sing N N 164 LEU CG HG sing N N 165 LEU CD1 HD11 sing N N 166 LEU CD1 HD12 sing N N 167 LEU CD1 HD13 sing N N 168 LEU CD2 HD21 sing N N 169 LEU CD2 HD22 sing N N 170 LEU CD2 HD23 sing N N 171 LEU OXT HXT sing N N 172 LYS N CA sing N N 173 LYS N H sing N N 174 LYS N H2 sing N N 175 LYS CA C sing N N 176 LYS CA CB sing N N 177 LYS CA HA sing N N 178 LYS C O doub N N 179 LYS C OXT sing N N 180 LYS CB CG sing N N 181 LYS CB HB2 sing N N 182 LYS CB HB3 sing N N 183 LYS CG CD sing N N 184 LYS CG HG2 sing N N 185 LYS CG HG3 sing N N 186 LYS CD CE sing N N 187 LYS CD HD2 sing N N 188 LYS CD HD3 sing N N 189 LYS CE NZ sing N N 190 LYS CE HE2 sing N N 191 LYS CE HE3 sing N N 192 LYS NZ HZ1 sing N N 193 LYS NZ HZ2 sing N N 194 LYS NZ HZ3 sing N N 195 LYS OXT HXT sing N N 196 MET N CA sing N N 197 MET N H sing N N 198 MET N H2 sing N N 199 MET CA C sing N N 200 MET CA CB sing N N 201 MET CA HA sing N N 202 MET C O doub N N 203 MET C OXT sing N N 204 MET CB CG sing N N 205 MET CB HB2 sing N N 206 MET CB HB3 sing N N 207 MET CG SD sing N N 208 MET CG HG2 sing N N 209 MET CG HG3 sing N N 210 MET SD CE sing N N 211 MET CE HE1 sing N N 212 MET CE HE2 sing N N 213 MET CE HE3 sing N N 214 MET OXT HXT sing N N 215 PHE N CA sing N N 216 PHE N H sing N N 217 PHE N H2 sing N N 218 PHE CA C sing N N 219 PHE CA CB sing N N 220 PHE CA HA sing N N 221 PHE C O doub N N 222 PHE C OXT sing N N 223 PHE CB CG sing N N 224 PHE CB HB2 sing N N 225 PHE CB HB3 sing N N 226 PHE CG CD1 doub Y N 227 PHE CG CD2 sing Y N 228 PHE CD1 CE1 sing Y N 229 PHE CD1 HD1 sing N N 230 PHE CD2 CE2 doub Y N 231 PHE CD2 HD2 sing N N 232 PHE CE1 CZ doub Y N 233 PHE CE1 HE1 sing N N 234 PHE CE2 CZ sing Y N 235 PHE CE2 HE2 sing N N 236 PHE CZ HZ sing N N 237 PHE OXT HXT sing N N 238 PRO N CA sing N N 239 PRO N CD sing N N 240 PRO N H sing N N 241 PRO CA C sing N N 242 PRO CA CB sing N N 243 PRO CA HA sing N N 244 PRO C O doub N N 245 PRO C OXT sing N N 246 PRO CB CG sing N N 247 PRO CB HB2 sing N N 248 PRO CB HB3 sing N N 249 PRO CG CD sing N N 250 PRO CG HG2 sing N N 251 PRO CG HG3 sing N N 252 PRO CD HD2 sing N N 253 PRO CD HD3 sing N N 254 PRO OXT HXT sing N N 255 SER N CA sing N N 256 SER N H sing N N 257 SER N H2 sing N N 258 SER CA C sing N N 259 SER CA CB sing N N 260 SER CA HA sing N N 261 SER C O doub N N 262 SER C OXT sing N N 263 SER CB OG sing N N 264 SER CB HB2 sing N N 265 SER CB HB3 sing N N 266 SER OG HG sing N N 267 SER OXT HXT sing N N 268 THR N CA sing N N 269 THR N H sing N N 270 THR N H2 sing N N 271 THR CA C sing N N 272 THR CA CB sing N N 273 THR CA HA sing N N 274 THR C O doub N N 275 THR C OXT sing N N 276 THR CB OG1 sing N N 277 THR CB CG2 sing N N 278 THR CB HB sing N N 279 THR OG1 HG1 sing N N 280 THR CG2 HG21 sing N N 281 THR CG2 HG22 sing N N 282 THR CG2 HG23 sing N N 283 THR OXT HXT sing N N 284 TRP N CA sing N N 285 TRP N H sing N N 286 TRP N H2 sing N N 287 TRP CA C sing N N 288 TRP CA CB sing N N 289 TRP CA HA sing N N 290 TRP C O doub N N 291 TRP C OXT sing N N 292 TRP CB CG sing N N 293 TRP CB HB2 sing N N 294 TRP CB HB3 sing N N 295 TRP CG CD1 doub Y N 296 TRP CG CD2 sing Y N 297 TRP CD1 NE1 sing Y N 298 TRP CD1 HD1 sing N N 299 TRP CD2 CE2 doub Y N 300 TRP CD2 CE3 sing Y N 301 TRP NE1 CE2 sing Y N 302 TRP NE1 HE1 sing N N 303 TRP CE2 CZ2 sing Y N 304 TRP CE3 CZ3 doub Y N 305 TRP CE3 HE3 sing N N 306 TRP CZ2 CH2 doub Y N 307 TRP CZ2 HZ2 sing N N 308 TRP CZ3 CH2 sing Y N 309 TRP CZ3 HZ3 sing N N 310 TRP CH2 HH2 sing N N 311 TRP OXT HXT sing N N 312 TYR N CA sing N N 313 TYR N H sing N N 314 TYR N H2 sing N N 315 TYR CA C sing N N 316 TYR CA CB sing N N 317 TYR CA HA sing N N 318 TYR C O doub N N 319 TYR C OXT sing N N 320 TYR CB CG sing N N 321 TYR CB HB2 sing N N 322 TYR CB HB3 sing N N 323 TYR CG CD1 doub Y N 324 TYR CG CD2 sing Y N 325 TYR CD1 CE1 sing Y N 326 TYR CD1 HD1 sing N N 327 TYR CD2 CE2 doub Y N 328 TYR CD2 HD2 sing N N 329 TYR CE1 CZ doub Y N 330 TYR CE1 HE1 sing N N 331 TYR CE2 CZ sing Y N 332 TYR CE2 HE2 sing N N 333 TYR CZ OH sing N N 334 TYR OH HH sing N N 335 TYR OXT HXT sing N N 336 VAL N CA sing N N 337 VAL N H sing N N 338 VAL N H2 sing N N 339 VAL CA C sing N N 340 VAL CA CB sing N N 341 VAL CA HA sing N N 342 VAL C O doub N N 343 VAL C OXT sing N N 344 VAL CB CG1 sing N N 345 VAL CB CG2 sing N N 346 VAL CB HB sing N N 347 VAL CG1 HG11 sing N N 348 VAL CG1 HG12 sing N N 349 VAL CG1 HG13 sing N N 350 VAL CG2 HG21 sing N N 351 VAL CG2 HG22 sing N N 352 VAL CG2 HG23 sing N N 353 VAL OXT HXT sing N N 354 # _pdbx_initial_refinement_model.accession_code ? _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name Other _pdbx_initial_refinement_model.details 'A MODEL OBTAINED FROM EXPERIMENTAL PHASING BY SAD USING PT SOAKED CRYSTALS' # _atom_sites.entry_id 4GEI _atom_sites.fract_transf_matrix[1][1] 0.010178 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000471 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013110 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.032261 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_