HEADER FLUORESCENT PROTEIN 03-AUG-12 4GF6 TITLE CRYSTAL STRUCTURE OF GFP WITH CUPRUM BOUND AT THE INCORPORATED METAL TITLE 2 CHELATING AMINO ACID PYZ151 COMPND MOL_ID: 1; COMPND 2 MOLECULE: GREEN FLUORESCENT PROTEIN; COMPND 3 CHAIN: B; COMPND 4 ENGINEERED: YES; COMPND 5 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: AEQUOREA VICTORIA; SOURCE 3 ORGANISM_COMMON: JELLYFISH; SOURCE 4 ORGANISM_TAXID: 6100; SOURCE 5 GENE: GFP; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID KEYWDS BETA BARREL, FLUORECENCE, ELECTRON TRANSDUCTION, FLUORESCENT PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR J.DONG,X.LIU,J.LI,J.WANG,W.GONG REVDAT 5 15-NOV-23 4GF6 1 ATOM REVDAT 4 13-SEP-23 4GF6 1 REMARK SEQADV LINK REVDAT 3 17-JUL-19 4GF6 1 REMARK LINK REVDAT 2 24-OCT-12 4GF6 1 JRNL REVDAT 1 29-AUG-12 4GF6 0 JRNL AUTH X.LIU,J.LI,J.DONG,C.HU,W.GONG,J.WANG JRNL TITL GENETIC INCORPORATION OF A METAL-CHELATING AMINO ACID AS A JRNL TITL 2 PROBE FOR PROTEIN ELECTRON TRANSFER. JRNL REF ANGEW.CHEM.INT.ED.ENGL. V. 51 10261 2012 JRNL REFN ISSN 1433-7851 JRNL PMID 22936654 JRNL DOI 10.1002/ANIE.201204962 REMARK 2 REMARK 2 RESOLUTION. 1.10 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0072 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.10 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 87031 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.167 REMARK 3 R VALUE (WORKING SET) : 0.166 REMARK 3 FREE R VALUE : 0.179 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4576 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.10 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.13 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6322 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 98.36 REMARK 3 BIN R VALUE (WORKING SET) : 0.1680 REMARK 3 BIN FREE R VALUE SET COUNT : 344 REMARK 3 BIN FREE R VALUE : 0.2010 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1916 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 297 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 11.06 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.02000 REMARK 3 B22 (A**2) : -0.18000 REMARK 3 B33 (A**2) : 0.15000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.035 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.033 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.018 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 0.761 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.960 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2068 ; 0.009 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2829 ; 1.465 ; 1.949 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 275 ; 6.218 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 102 ;35.773 ;25.000 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 346 ;12.352 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 6 ; 8.057 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 310 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1611 ; 0.007 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1253 ; 1.105 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 2037 ; 1.764 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 815 ; 1.985 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 774 ; 2.899 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 2068 ; 1.049 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 303 ; 4.829 ; 3.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 2001 ; 3.017 ; 3.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): -2.3445 3.2047 4.2884 REMARK 3 T TENSOR REMARK 3 T11: 0.0038 T22: 0.0008 REMARK 3 T33: 0.0012 T12: 0.0001 REMARK 3 T13: 0.0000 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.0604 L22: 0.0382 REMARK 3 L33: 0.0204 L12: -0.0091 REMARK 3 L13: -0.0045 L23: -0.0060 REMARK 3 S TENSOR REMARK 3 S11: -0.0017 S12: 0.0009 S13: 0.0022 REMARK 3 S21: -0.0007 S22: 0.0042 S23: -0.0027 REMARK 3 S31: 0.0005 S32: -0.0015 S33: -0.0025 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4GF6 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074105. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 12-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 90 REMARK 200 PH : 8.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.979 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 91616 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.100 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.1 REMARK 200 DATA REDUNDANCY : 6.200 REMARK 200 R MERGE (I) : 0.08800 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 21.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.10 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.5 REMARK 200 DATA REDUNDANCY IN SHELL : 6.10 REMARK 200 R MERGE FOR SHELL (I) : 0.34200 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 6.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: 4GES REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60~100MG/ML PROTEIN SAMPLE IN 50 MM REMARK 280 HEPES, PH 7.5, RESERVIOR SOLUTION:17~19% PEG 3000, 100MM TRIS PH REMARK 280 8.9,0.2M CALCIUM ACETATE , VAPOR DIFFUSION, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 25.41350 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 35.18450 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.52600 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 35.18450 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 25.41350 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.52600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LYS B 3 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER B 65 O REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 C SER B 65 N GLY B 67 1.47 REMARK 500 OD1 ASP B 36 O HOH B 432 2.05 REMARK 500 OG1 THR B 203 O HOH B 579 2.07 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 TYR B 66 C - N - CA ANGL. DEV. = -15.2 DEGREES REMARK 500 TYR B 66 N - CA - CB ANGL. DEV. = 13.5 DEGREES REMARK 500 TYR B 66 CA - CB - CG ANGL. DEV. = 12.2 DEGREES REMARK 500 TYR B 66 CB - CG - CD2 ANGL. DEV. = -5.1 DEGREES REMARK 500 TYR B 66 CB - CG - CD1 ANGL. DEV. = 4.4 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER B 65 -102.79 -127.31 REMARK 500 TYR B 66 15.01 -15.35 REMARK 500 HIS B 241 -8.86 -150.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 306 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 34 OE1 REMARK 620 2 GLU B 34 OE2 57.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CU B 301 CU REMARK 620 N RES CSSEQI ATOM REMARK 620 1 0WZ B 151 OH REMARK 620 2 0WZ B 151 N1 91.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 302 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 197 OD1 REMARK 620 2 ASP B 197 OD2 50.5 REMARK 620 3 HOH B 419 O 155.6 153.2 REMARK 620 4 HOH B 452 O 90.8 82.6 89.4 REMARK 620 5 HOH B 459 O 124.5 74.0 79.3 77.8 REMARK 620 6 HOH B 476 O 93.5 78.1 98.1 150.9 76.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 304 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 240 OE1 REMARK 620 2 GLU B 240 OE2 56.1 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 303 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH B 418 O REMARK 620 2 HOH B 435 O 94.2 REMARK 620 3 HOH B 461 O 86.5 177.1 REMARK 620 N 1 2 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CU B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CA B 306 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GES RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF GFP-TYR151PYZ WITH AN UNNATURAL AMINO ACID REMARK 900 INCORPORATION DBREF 4GF6 B 4 238 UNP P42212 GFP_AEQVI 4 238 SEQADV 4GF6 SER B 99 UNP P42212 PHE 99 ENGINEERED MUTATION SEQADV 4GF6 THR B 153 UNP P42212 MET 153 ENGINEERED MUTATION SEQADV 4GF6 ALA B 163 UNP P42212 VAL 163 ENGINEERED MUTATION SEQADV 4GF6 LEU B 239 UNP P42212 EXPRESSION TAG SEQADV 4GF6 GLU B 240 UNP P42212 EXPRESSION TAG SEQADV 4GF6 HIS B 241 UNP P42212 EXPRESSION TAG SEQADV 4GF6 HIS B 242 UNP P42212 EXPRESSION TAG SEQADV 4GF6 HIS B 243 UNP P42212 EXPRESSION TAG SEQADV 4GF6 HIS B 244 UNP P42212 EXPRESSION TAG SEQADV 4GF6 HIS B 245 UNP P42212 EXPRESSION TAG SEQADV 4GF6 HIS B 246 UNP P42212 EXPRESSION TAG SEQRES 1 B 246 MET SER LYS GLY ALA GLU LEU PHE THR GLY VAL VAL PRO SEQRES 2 B 246 ILE LEU VAL GLU LEU ASP GLY ASP VAL ASN GLY HIS LYS SEQRES 3 B 246 PHE SER VAL SER GLY GLU GLY GLU GLY ASP ALA THR TYR SEQRES 4 B 246 GLY LYS LEU THR LEU LYS PHE ILE CYS THR THR GLY LYS SEQRES 5 B 246 LEU PRO VAL PRO TRP PRO THR LEU VAL THR THR PHE SER SEQRES 6 B 246 TYR GLY VAL GLN CYS PHE SER ARG TYR PRO ASP HIS MET SEQRES 7 B 246 LYS ALA HIS ASP PHE PHE LYS SER ALA MET PRO GLU GLY SEQRES 8 B 246 TYR VAL GLN GLU ARG THR ILE SER PHE LYS ASP ASP GLY SEQRES 9 B 246 ASN TYR LYS THR ARG ALA GLU VAL LYS PHE GLU GLY ASP SEQRES 10 B 246 THR LEU VAL ASN ARG ILE ALA LEU LYS GLY ILE ASP PHE SEQRES 11 B 246 LYS GLU ALA GLY ASN ILE LEU GLY HIS LYS LEU GLU TYR SEQRES 12 B 246 ASN TYR ASN SER HIS ASN VAL 0WZ ILE THR ALA ASP LYS SEQRES 13 B 246 GLN LYS ASN GLY ILE LYS ALA ASN PHE LYS ILE ARG HIS SEQRES 14 B 246 ASN ILE ALA ASP GLY SER VAL GLN LEU ALA ASP HIS TYR SEQRES 15 B 246 GLN GLN ASN THR PRO ILE GLY ALA GLY PRO VAL LEU LEU SEQRES 16 B 246 PRO ASP ASN HIS TYR LEU SER THR GLN SER ALA LEU SER SEQRES 17 B 246 LYS ASP PRO ASN GLU LYS ARG ASP HIS MET VAL LEU LEU SEQRES 18 B 246 GLU PHE VAL THR ALA ALA GLY ILE THR HIS GLY MET ASP SEQRES 19 B 246 GLU ALA TYR ALA LEU GLU HIS HIS HIS HIS HIS HIS MODRES 4GF6 0WZ B 151 TYR 3-(1H-PYRAZOL-1-YL)-L-TYROSINE HET 0WZ B 151 17 HET CU B 301 1 HET CA B 302 1 HET CA B 303 1 HET CA B 304 1 HET CA B 305 1 HET CA B 306 1 HETNAM 0WZ 3-(1H-PYRAZOL-1-YL)-L-TYROSINE HETNAM CU COPPER (II) ION HETNAM CA CALCIUM ION FORMUL 1 0WZ C12 H13 N3 O3 FORMUL 2 CU CU 2+ FORMUL 3 CA 5(CA 2+) FORMUL 8 HOH *297(H2 O) HELIX 1 1 GLY B 4 THR B 9 5 6 HELIX 2 2 ALA B 37 TYR B 39 5 3 HELIX 3 3 PRO B 56 THR B 59 5 4 HELIX 4 4 LEU B 60 SER B 65 1 6 HELIX 5 5 VAL B 68 SER B 72 5 5 HELIX 6 6 PRO B 75 HIS B 81 5 7 HELIX 7 7 ASP B 82 ALA B 87 1 6 HELIX 8 8 LYS B 156 ASN B 159 5 4 HELIX 9 9 GLY B 232 TYR B 237 1 6 SHEET 1 A12 HIS B 148 VAL B 150 0 SHEET 2 A12 TYR B 200 SER B 208 -1 O THR B 203 N HIS B 148 SHEET 3 A12 HIS B 217 ALA B 227 -1 O THR B 225 N SER B 202 SHEET 4 A12 LYS B 41 CYS B 48 -1 N PHE B 46 O MET B 218 SHEET 5 A12 HIS B 25 ASP B 36 -1 N ASP B 36 O LYS B 41 SHEET 6 A12 VAL B 12 VAL B 22 -1 N VAL B 16 O GLY B 31 SHEET 7 A12 THR B 118 ILE B 128 1 O GLY B 127 N ASP B 21 SHEET 8 A12 ASN B 105 GLU B 115 -1 N LYS B 113 O VAL B 120 SHEET 9 A12 TYR B 92 PHE B 100 -1 N ILE B 98 O TYR B 106 SHEET 10 A12 VAL B 176 PRO B 187 -1 O THR B 186 N VAL B 93 SHEET 11 A12 GLY B 160 ASN B 170 -1 N PHE B 165 O HIS B 181 SHEET 12 A12 THR B 153 ASP B 155 -1 N ASP B 155 O GLY B 160 LINK C 0WZ B 151 N ILE B 152 1555 1555 1.41 LINK OE1 GLU B 34 CA CA B 306 1555 1555 2.11 LINK OE2 GLU B 34 CA CA B 306 1555 1555 2.43 LINK OH 0WZ B 151 CU CU B 301 1555 1555 1.86 LINK N1 0WZ B 151 CU CU B 301 1555 1555 2.01 LINK OD1 ASP B 197 CA CA B 302 1555 1555 2.42 LINK OD2 ASP B 197 CA CA B 302 1555 1555 2.64 LINK O LEU B 239 CA CA B 305 1555 1555 1.98 LINK OE1 GLU B 240 CA CA B 304 1555 1555 2.06 LINK OE2 GLU B 240 CA CA B 304 1555 1555 2.52 LINK CA CA B 302 O HOH B 419 1555 1555 2.41 LINK CA CA B 302 O HOH B 452 1555 1555 2.36 LINK CA CA B 302 O HOH B 459 1555 1555 2.38 LINK CA CA B 302 O HOH B 476 1555 1555 2.37 LINK CA CA B 303 O HOH B 418 1555 1555 2.07 LINK CA CA B 303 O HOH B 435 1555 1555 2.57 LINK CA CA B 303 O HOH B 461 1555 1555 2.56 CISPEP 1 MET B 88 PRO B 89 0 4.55 SITE 1 AC1 1 0WZ B 151 SITE 1 AC2 6 GLU B 142 ASP B 197 HOH B 419 HOH B 452 SITE 2 AC2 6 HOH B 459 HOH B 476 SITE 1 AC3 6 LYS B 209 HIS B 243 HIS B 245 HOH B 418 SITE 2 AC3 6 HOH B 435 HOH B 461 SITE 1 AC4 4 GLU B 111 GLU B 240 HIS B 244 HIS B 246 SITE 1 AC5 4 LEU B 239 GLU B 240 HIS B 241 HIS B 242 SITE 1 AC6 4 GLU B 34 HIS B 231 ASP B 234 HIS B 241 CRYST1 50.827 63.052 70.369 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.019675 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015860 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014211 0.00000