data_4GFQ # _entry.id 4GFQ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4GFQ pdb_00004gfq 10.2210/pdb4gfq/pdb RCSB RCSB074125 ? ? WWPDB D_1000074125 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id CSGID-IDP04731 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4GFQ _pdbx_database_status.recvd_initial_deposition_date 2012-08-03 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Minasov, G.' 1 'Halavaty, A.' 2 'Shuvalova, L.' 3 'Dubrovska, I.' 4 'Winsor, J.' 5 'Papazisi, L.' 6 'Anderson, W.F.' 7 'Center for Structural Genomics of Infectious Diseases (CSGID)' 8 # _citation.id primary _citation.title '2.65 Angstrom Resolution Crystal Structure of Ribosome Recycling Factor (frr) from Bacillus anthracis' _citation.journal_abbrev 'TO BE PUBLISHED' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Minasov, G.' 1 ? primary 'Halavaty, A.' 2 ? primary 'Shuvalova, L.' 3 ? primary 'Dubrovska, I.' 4 ? primary 'Winsor, J.' 5 ? primary 'Papazisi, L.' 6 ? primary 'Anderson, W.F.' 7 ? primary 'Center for Structural Genomics of Infectious Diseases (CSGID)' 8 ? # _cell.entry_id 4GFQ _cell.length_a 95.548 _cell.length_b 95.548 _cell.length_c 95.548 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 12 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4GFQ _symmetry.space_group_name_H-M 'P 2 3' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 195 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Ribosome-recycling factor' 23455.588 1 ? ? ? ? 2 non-polymer syn 'CHLORIDE ION' 35.453 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 4 non-polymer syn 'PHOSPHATE ION' 94.971 1 ? ? ? ? 5 non-polymer syn 'DI(HYDROXYETHYL)ETHER' 106.120 1 ? ? ? ? 6 water nat water 18.015 26 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'RRF, Ribosome-releasing factor' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MHHHHHHSSGVDLGTENLYFQSNAMGQQVLKFSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLAN ITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGN DDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV ; _entity_poly.pdbx_seq_one_letter_code_can ;MHHHHHHSSGVDLGTENLYFQSNAMGQQVLKFSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLAN ITVPEARLLVIQPYDKTSIGDIEKAILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGN DDLKKLEKAGEITEDDLRGYTEDIQKETDKYIAKVDEIAKNKEKEIMEV ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier CSGID-IDP04731 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 ASN n 1 24 ALA n 1 25 MET n 1 26 GLY n 1 27 GLN n 1 28 GLN n 1 29 VAL n 1 30 LEU n 1 31 LYS n 1 32 PHE n 1 33 SER n 1 34 ASN n 1 35 GLU n 1 36 LYS n 1 37 MET n 1 38 GLU n 1 39 LYS n 1 40 ALA n 1 41 VAL n 1 42 ALA n 1 43 ALA n 1 44 TYR n 1 45 SER n 1 46 ARG n 1 47 GLU n 1 48 LEU n 1 49 ALA n 1 50 THR n 1 51 VAL n 1 52 ARG n 1 53 ALA n 1 54 GLY n 1 55 ARG n 1 56 ALA n 1 57 SER n 1 58 ALA n 1 59 SER n 1 60 VAL n 1 61 LEU n 1 62 ASP n 1 63 LYS n 1 64 VAL n 1 65 GLN n 1 66 VAL n 1 67 ASP n 1 68 TYR n 1 69 TYR n 1 70 GLY n 1 71 ALA n 1 72 PRO n 1 73 THR n 1 74 PRO n 1 75 VAL n 1 76 VAL n 1 77 GLN n 1 78 LEU n 1 79 ALA n 1 80 ASN n 1 81 ILE n 1 82 THR n 1 83 VAL n 1 84 PRO n 1 85 GLU n 1 86 ALA n 1 87 ARG n 1 88 LEU n 1 89 LEU n 1 90 VAL n 1 91 ILE n 1 92 GLN n 1 93 PRO n 1 94 TYR n 1 95 ASP n 1 96 LYS n 1 97 THR n 1 98 SER n 1 99 ILE n 1 100 GLY n 1 101 ASP n 1 102 ILE n 1 103 GLU n 1 104 LYS n 1 105 ALA n 1 106 ILE n 1 107 LEU n 1 108 LYS n 1 109 ALA n 1 110 ASP n 1 111 LEU n 1 112 GLY n 1 113 LEU n 1 114 ASN n 1 115 PRO n 1 116 SER n 1 117 ASN n 1 118 ASP n 1 119 GLY n 1 120 THR n 1 121 VAL n 1 122 ILE n 1 123 ARG n 1 124 ILE n 1 125 ALA n 1 126 PHE n 1 127 PRO n 1 128 ALA n 1 129 LEU n 1 130 THR n 1 131 GLU n 1 132 GLU n 1 133 ARG n 1 134 ARG n 1 135 ARG n 1 136 ASP n 1 137 LEU n 1 138 VAL n 1 139 LYS n 1 140 VAL n 1 141 VAL n 1 142 LYS n 1 143 LYS n 1 144 TYR n 1 145 ALA n 1 146 GLU n 1 147 GLU n 1 148 ALA n 1 149 LYS n 1 150 VAL n 1 151 ALA n 1 152 VAL n 1 153 ARG n 1 154 ASN n 1 155 VAL n 1 156 ARG n 1 157 ARG n 1 158 ASP n 1 159 GLY n 1 160 ASN n 1 161 ASP n 1 162 ASP n 1 163 LEU n 1 164 LYS n 1 165 LYS n 1 166 LEU n 1 167 GLU n 1 168 LYS n 1 169 ALA n 1 170 GLY n 1 171 GLU n 1 172 ILE n 1 173 THR n 1 174 GLU n 1 175 ASP n 1 176 ASP n 1 177 LEU n 1 178 ARG n 1 179 GLY n 1 180 TYR n 1 181 THR n 1 182 GLU n 1 183 ASP n 1 184 ILE n 1 185 GLN n 1 186 LYS n 1 187 GLU n 1 188 THR n 1 189 ASP n 1 190 LYS n 1 191 TYR n 1 192 ILE n 1 193 ALA n 1 194 LYS n 1 195 VAL n 1 196 ASP n 1 197 GLU n 1 198 ILE n 1 199 ALA n 1 200 LYS n 1 201 ASN n 1 202 LYS n 1 203 GLU n 1 204 LYS n 1 205 GLU n 1 206 ILE n 1 207 MET n 1 208 GLU n 1 209 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name anthrax _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BAS3675, BA_3962, frr, GBAA_3962' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Sterne _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus anthracis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1392 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 Magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code RRF_BACAN _struct_ref.pdbx_db_accession Q81WL1 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MGQQVLKFSNEKMEKAVAAYSRELATVRAGRASASVLDKVQVDYYGAPTPVVQLANITVPEARLLVIQPYDKTSIGDIEK AILKADLGLNPSNDGTVIRIAFPALTEERRRDLVKVVKKYAEEAKVAVRNVRRDGNDDLKKLEKAGEITEDDLRGYTEDI QKETDKYIAKVDEIAKNKEKEIMEV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4GFQ _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 25 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 209 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q81WL1 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 185 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 185 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4GFQ MET A 1 ? UNP Q81WL1 ? ? 'expression tag' -23 1 1 4GFQ HIS A 2 ? UNP Q81WL1 ? ? 'expression tag' -22 2 1 4GFQ HIS A 3 ? UNP Q81WL1 ? ? 'expression tag' -21 3 1 4GFQ HIS A 4 ? UNP Q81WL1 ? ? 'expression tag' -20 4 1 4GFQ HIS A 5 ? UNP Q81WL1 ? ? 'expression tag' -19 5 1 4GFQ HIS A 6 ? UNP Q81WL1 ? ? 'expression tag' -18 6 1 4GFQ HIS A 7 ? UNP Q81WL1 ? ? 'expression tag' -17 7 1 4GFQ SER A 8 ? UNP Q81WL1 ? ? 'expression tag' -16 8 1 4GFQ SER A 9 ? UNP Q81WL1 ? ? 'expression tag' -15 9 1 4GFQ GLY A 10 ? UNP Q81WL1 ? ? 'expression tag' -14 10 1 4GFQ VAL A 11 ? UNP Q81WL1 ? ? 'expression tag' -13 11 1 4GFQ ASP A 12 ? UNP Q81WL1 ? ? 'expression tag' -12 12 1 4GFQ LEU A 13 ? UNP Q81WL1 ? ? 'expression tag' -11 13 1 4GFQ GLY A 14 ? UNP Q81WL1 ? ? 'expression tag' -10 14 1 4GFQ THR A 15 ? UNP Q81WL1 ? ? 'expression tag' -9 15 1 4GFQ GLU A 16 ? UNP Q81WL1 ? ? 'expression tag' -8 16 1 4GFQ ASN A 17 ? UNP Q81WL1 ? ? 'expression tag' -7 17 1 4GFQ LEU A 18 ? UNP Q81WL1 ? ? 'expression tag' -6 18 1 4GFQ TYR A 19 ? UNP Q81WL1 ? ? 'expression tag' -5 19 1 4GFQ PHE A 20 ? UNP Q81WL1 ? ? 'expression tag' -4 20 1 4GFQ GLN A 21 ? UNP Q81WL1 ? ? 'expression tag' -3 21 1 4GFQ SER A 22 ? UNP Q81WL1 ? ? 'expression tag' -2 22 1 4GFQ ASN A 23 ? UNP Q81WL1 ? ? 'expression tag' -1 23 1 4GFQ ALA A 24 ? UNP Q81WL1 ? ? 'expression tag' 0 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CL non-polymer . 'CHLORIDE ION' ? 'Cl -1' 35.453 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PEG non-polymer . 'DI(HYDROXYETHYL)ETHER' ? 'C4 H10 O3' 106.120 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PO4 non-polymer . 'PHOSPHATE ION' ? 'O4 P -3' 94.971 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4GFQ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 3.10 _exptl_crystal.density_percent_sol 60.31 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.pdbx_details ;protein: 7.4 mg/mL in 0.25 M sodium cloride, 0.01 M Tris-HCl, pH 8.3, screen: Classics II (H3), 0.24 M sodium malonate, pH 7.0, 20% w/v PEG3350, VAPOR DIFFUSION, SITTING DROP, temperature 295K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2012-06-04 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.07806 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-D _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.07806 # _reflns.entry_id 4GFQ _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 30.0 _reflns.d_resolution_high 2.65 _reflns.number_obs 8662 _reflns.number_all 8662 _reflns.percent_possible_obs 99.3 _reflns.pdbx_Rmerge_I_obs 0.061 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 18.0 _reflns.B_iso_Wilson_estimate 87.2 _reflns.pdbx_redundancy 4.3 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.65 _reflns_shell.d_res_low 2.70 _reflns_shell.percent_possible_all 100 _reflns_shell.Rmerge_I_obs 0.553 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 430 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4GFQ _refine.ls_number_reflns_obs 7596 _refine.ls_number_reflns_all 7596 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 28.81 _refine.ls_d_res_high 2.65 _refine.ls_percent_reflns_obs 91.73 _refine.ls_R_factor_obs 0.20510 _refine.ls_R_factor_all 0.20510 _refine.ls_R_factor_R_work 0.20264 _refine.ls_R_factor_R_free 0.25452 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.8 _refine.ls_number_reflns_R_free 379 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.960 _refine.correlation_coeff_Fo_to_Fc_free 0.938 _refine.B_iso_mean 66.329 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES : WITH TLS ADDED ; _refine.pdbx_starting_model 'PDB ENTRY 1EK8' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model 'THERMAL FACTORS INDIVIDUALLY REFINED' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.563 _refine.pdbx_overall_ESU_R_Free 0.316 _refine.overall_SU_ML 0.249 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 26.974 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1458 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 26 _refine_hist.number_atoms_solvent 26 _refine_hist.number_atoms_total 1510 _refine_hist.d_res_high 2.65 _refine_hist.d_res_low 28.81 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.012 0.022 ? 1504 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.001 0.020 ? 1062 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.412 2.003 ? 2021 ? 'X-RAY DIFFRACTION' r_angle_other_deg 0.746 3.000 ? 2601 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 1.916 5.000 ? 187 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 25.768 24.853 ? 68 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 11.025 15.000 ? 293 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 14.231 15.000 ? 13 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.082 0.200 ? 232 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.004 0.020 ? 1638 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.001 0.020 ? 271 ? 'X-RAY DIFFRACTION' r_mcbond_it 1.005 1.500 ? 933 ? 'X-RAY DIFFRACTION' r_mcbond_other 0.243 1.500 ? 376 ? 'X-RAY DIFFRACTION' r_mcangle_it 2.005 2.000 ? 1508 ? 'X-RAY DIFFRACTION' r_scbond_it 3.517 3.000 ? 571 ? 'X-RAY DIFFRACTION' r_scangle_it 5.903 4.500 ? 513 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.650 _refine_ls_shell.d_res_low 2.718 _refine_ls_shell.number_reflns_R_work 532 _refine_ls_shell.R_factor_R_work 0.299 _refine_ls_shell.percent_reflns_obs 92.06 _refine_ls_shell.R_factor_R_free 0.426 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 36 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs 532 _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4GFQ _struct.title '2.65 Angstrom Resolution Crystal Structure of Ribosome Recycling Factor (frr) from Bacillus anthracis' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GFQ _struct_keywords.pdbx_keywords TRANSLATION _struct_keywords.text ;Structural Genomics, NIAID, National Institute of Allergy and Infectious Diseases, Center for Structural Genomics of Infectious Diseases, CSGID, TRANSLATION ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 4 ? G N N 5 ? H N N 6 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ALA A 24 ? THR A 50 ? ALA A 0 THR A 26 1 ? 27 HELX_P HELX_P2 2 SER A 57 ? ASP A 62 ? SER A 33 ASP A 38 5 ? 6 HELX_P HELX_P3 3 ASP A 95 ? THR A 97 ? ASP A 71 THR A 73 5 ? 3 HELX_P HELX_P4 4 SER A 98 ? ASP A 110 ? SER A 74 ASP A 86 1 ? 13 HELX_P HELX_P5 5 THR A 130 ? ALA A 169 ? THR A 106 ALA A 145 1 ? 40 HELX_P HELX_P6 6 THR A 173 ? GLU A 208 ? THR A 149 GLU A 184 1 ? 36 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 65 ? ASP A 67 ? GLN A 41 ASP A 43 A 2 PRO A 72 ? PRO A 74 ? PRO A 48 PRO A 50 B 1 ALA A 79 ? GLU A 85 ? ALA A 55 GLU A 61 B 2 LEU A 88 ? PRO A 93 ? LEU A 64 PRO A 69 B 3 ILE A 122 ? ALA A 125 ? ILE A 98 ALA A 101 B 4 SER A 116 ? ASN A 117 ? SER A 92 ASN A 93 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N VAL A 66 ? N VAL A 42 O THR A 73 ? O THR A 49 B 1 2 N THR A 82 ? N THR A 58 O VAL A 90 ? O VAL A 66 B 2 3 N LEU A 89 ? N LEU A 65 O ILE A 124 ? O ILE A 100 B 3 4 O ARG A 123 ? O ARG A 99 N SER A 116 ? N SER A 92 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A CL 201 ? 2 'BINDING SITE FOR RESIDUE CL A 201' AC2 Software A CL 202 ? 2 'BINDING SITE FOR RESIDUE CL A 202' AC3 Software A GOL 203 ? 3 'BINDING SITE FOR RESIDUE GOL A 203' AC4 Software A GOL 204 ? 2 'BINDING SITE FOR RESIDUE GOL A 204' AC5 Software A PO4 205 ? 3 'BINDING SITE FOR RESIDUE PO4 A 205' AC6 Software A PEG 206 ? 4 'BINDING SITE FOR RESIDUE PEG A 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 ARG A 52 ? ARG A 28 . ? 1_555 ? 2 AC1 2 VAL A 83 ? VAL A 59 . ? 1_555 ? 3 AC2 2 ARG A 157 ? ARG A 133 . ? 1_555 ? 4 AC2 2 ASN A 160 ? ASN A 136 . ? 1_555 ? 5 AC3 3 THR A 173 ? THR A 149 . ? 1_555 ? 6 AC3 3 GLU A 174 ? GLU A 150 . ? 1_555 ? 7 AC3 3 ASP A 175 ? ASP A 151 . ? 1_555 ? 8 AC4 2 PRO A 84 ? PRO A 60 . ? 1_555 ? 9 AC4 2 PEG G . ? PEG A 206 . ? 1_555 ? 10 AC5 3 LYS A 149 ? LYS A 125 . ? 1_555 ? 11 AC5 3 ARG A 153 ? ARG A 129 . ? 1_555 ? 12 AC5 3 ILE A 192 ? ILE A 168 . ? 1_555 ? 13 AC6 4 ALA A 53 ? ALA A 29 . ? 1_555 ? 14 AC6 4 ALA A 86 ? ALA A 62 . ? 1_555 ? 15 AC6 4 GLU A 205 ? GLU A 181 . ? 1_555 ? 16 AC6 4 GOL E . ? GOL A 204 . ? 1_555 ? # _database_PDB_matrix.entry_id 4GFQ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4GFQ _atom_sites.fract_transf_matrix[1][1] 0.010466 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010466 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010466 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CL N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -23 ? ? ? A . n A 1 2 HIS 2 -22 ? ? ? A . n A 1 3 HIS 3 -21 ? ? ? A . n A 1 4 HIS 4 -20 ? ? ? A . n A 1 5 HIS 5 -19 ? ? ? A . n A 1 6 HIS 6 -18 ? ? ? A . n A 1 7 HIS 7 -17 ? ? ? A . n A 1 8 SER 8 -16 ? ? ? A . n A 1 9 SER 9 -15 ? ? ? A . n A 1 10 GLY 10 -14 ? ? ? A . n A 1 11 VAL 11 -13 ? ? ? A . n A 1 12 ASP 12 -12 ? ? ? A . n A 1 13 LEU 13 -11 ? ? ? A . n A 1 14 GLY 14 -10 ? ? ? A . n A 1 15 THR 15 -9 ? ? ? A . n A 1 16 GLU 16 -8 ? ? ? A . n A 1 17 ASN 17 -7 ? ? ? A . n A 1 18 LEU 18 -6 ? ? ? A . n A 1 19 TYR 19 -5 ? ? ? A . n A 1 20 PHE 20 -4 ? ? ? A . n A 1 21 GLN 21 -3 ? ? ? A . n A 1 22 SER 22 -2 ? ? ? A . n A 1 23 ASN 23 -1 ? ? ? A . n A 1 24 ALA 24 0 0 ALA ALA A . n A 1 25 MET 25 1 1 MET MET A . n A 1 26 GLY 26 2 2 GLY GLY A . n A 1 27 GLN 27 3 3 GLN GLN A . n A 1 28 GLN 28 4 4 GLN GLN A . n A 1 29 VAL 29 5 5 VAL VAL A . n A 1 30 LEU 30 6 6 LEU LEU A . n A 1 31 LYS 31 7 7 LYS LYS A . n A 1 32 PHE 32 8 8 PHE PHE A . n A 1 33 SER 33 9 9 SER SER A . n A 1 34 ASN 34 10 10 ASN ASN A . n A 1 35 GLU 35 11 11 GLU GLU A . n A 1 36 LYS 36 12 12 LYS LYS A . n A 1 37 MET 37 13 13 MET MET A . n A 1 38 GLU 38 14 14 GLU GLU A . n A 1 39 LYS 39 15 15 LYS LYS A . n A 1 40 ALA 40 16 16 ALA ALA A . n A 1 41 VAL 41 17 17 VAL VAL A . n A 1 42 ALA 42 18 18 ALA ALA A . n A 1 43 ALA 43 19 19 ALA ALA A . n A 1 44 TYR 44 20 20 TYR TYR A . n A 1 45 SER 45 21 21 SER SER A . n A 1 46 ARG 46 22 22 ARG ARG A . n A 1 47 GLU 47 23 23 GLU GLU A . n A 1 48 LEU 48 24 24 LEU LEU A . n A 1 49 ALA 49 25 25 ALA ALA A . n A 1 50 THR 50 26 26 THR THR A . n A 1 51 VAL 51 27 27 VAL VAL A . n A 1 52 ARG 52 28 28 ARG ARG A . n A 1 53 ALA 53 29 29 ALA ALA A . n A 1 54 GLY 54 30 30 GLY GLY A . n A 1 55 ARG 55 31 31 ARG ARG A . n A 1 56 ALA 56 32 32 ALA ALA A . n A 1 57 SER 57 33 33 SER SER A . n A 1 58 ALA 58 34 34 ALA ALA A . n A 1 59 SER 59 35 35 SER SER A . n A 1 60 VAL 60 36 36 VAL VAL A . n A 1 61 LEU 61 37 37 LEU LEU A . n A 1 62 ASP 62 38 38 ASP ASP A . n A 1 63 LYS 63 39 39 LYS LYS A . n A 1 64 VAL 64 40 40 VAL VAL A . n A 1 65 GLN 65 41 41 GLN GLN A . n A 1 66 VAL 66 42 42 VAL VAL A . n A 1 67 ASP 67 43 43 ASP ASP A . n A 1 68 TYR 68 44 44 TYR TYR A . n A 1 69 TYR 69 45 45 TYR TYR A . n A 1 70 GLY 70 46 46 GLY GLY A . n A 1 71 ALA 71 47 47 ALA ALA A . n A 1 72 PRO 72 48 48 PRO PRO A . n A 1 73 THR 73 49 49 THR THR A . n A 1 74 PRO 74 50 50 PRO PRO A . n A 1 75 VAL 75 51 51 VAL VAL A . n A 1 76 VAL 76 52 52 VAL VAL A . n A 1 77 GLN 77 53 53 GLN GLN A . n A 1 78 LEU 78 54 54 LEU LEU A . n A 1 79 ALA 79 55 55 ALA ALA A . n A 1 80 ASN 80 56 56 ASN ASN A . n A 1 81 ILE 81 57 57 ILE ILE A . n A 1 82 THR 82 58 58 THR THR A . n A 1 83 VAL 83 59 59 VAL VAL A . n A 1 84 PRO 84 60 60 PRO PRO A . n A 1 85 GLU 85 61 61 GLU GLU A . n A 1 86 ALA 86 62 62 ALA ALA A . n A 1 87 ARG 87 63 63 ARG ARG A . n A 1 88 LEU 88 64 64 LEU LEU A . n A 1 89 LEU 89 65 65 LEU LEU A . n A 1 90 VAL 90 66 66 VAL VAL A . n A 1 91 ILE 91 67 67 ILE ILE A . n A 1 92 GLN 92 68 68 GLN GLN A . n A 1 93 PRO 93 69 69 PRO PRO A . n A 1 94 TYR 94 70 70 TYR TYR A . n A 1 95 ASP 95 71 71 ASP ASP A . n A 1 96 LYS 96 72 72 LYS LYS A . n A 1 97 THR 97 73 73 THR THR A . n A 1 98 SER 98 74 74 SER SER A . n A 1 99 ILE 99 75 75 ILE ILE A . n A 1 100 GLY 100 76 76 GLY GLY A . n A 1 101 ASP 101 77 77 ASP ASP A . n A 1 102 ILE 102 78 78 ILE ILE A . n A 1 103 GLU 103 79 79 GLU GLU A . n A 1 104 LYS 104 80 80 LYS LYS A . n A 1 105 ALA 105 81 81 ALA ALA A . n A 1 106 ILE 106 82 82 ILE ILE A . n A 1 107 LEU 107 83 83 LEU LEU A . n A 1 108 LYS 108 84 84 LYS LYS A . n A 1 109 ALA 109 85 85 ALA ALA A . n A 1 110 ASP 110 86 86 ASP ASP A . n A 1 111 LEU 111 87 87 LEU LEU A . n A 1 112 GLY 112 88 88 GLY GLY A . n A 1 113 LEU 113 89 89 LEU LEU A . n A 1 114 ASN 114 90 90 ASN ASN A . n A 1 115 PRO 115 91 91 PRO PRO A . n A 1 116 SER 116 92 92 SER SER A . n A 1 117 ASN 117 93 93 ASN ASN A . n A 1 118 ASP 118 94 94 ASP ASP A . n A 1 119 GLY 119 95 95 GLY GLY A . n A 1 120 THR 120 96 96 THR THR A . n A 1 121 VAL 121 97 97 VAL VAL A . n A 1 122 ILE 122 98 98 ILE ILE A . n A 1 123 ARG 123 99 99 ARG ARG A . n A 1 124 ILE 124 100 100 ILE ILE A . n A 1 125 ALA 125 101 101 ALA ALA A . n A 1 126 PHE 126 102 102 PHE PHE A . n A 1 127 PRO 127 103 103 PRO PRO A . n A 1 128 ALA 128 104 104 ALA ALA A . n A 1 129 LEU 129 105 105 LEU LEU A . n A 1 130 THR 130 106 106 THR THR A . n A 1 131 GLU 131 107 107 GLU GLU A . n A 1 132 GLU 132 108 108 GLU GLU A . n A 1 133 ARG 133 109 109 ARG ARG A . n A 1 134 ARG 134 110 110 ARG ARG A . n A 1 135 ARG 135 111 111 ARG ARG A . n A 1 136 ASP 136 112 112 ASP ASP A . n A 1 137 LEU 137 113 113 LEU LEU A . n A 1 138 VAL 138 114 114 VAL VAL A . n A 1 139 LYS 139 115 115 LYS LYS A . n A 1 140 VAL 140 116 116 VAL VAL A . n A 1 141 VAL 141 117 117 VAL VAL A . n A 1 142 LYS 142 118 118 LYS LYS A . n A 1 143 LYS 143 119 119 LYS LYS A . n A 1 144 TYR 144 120 120 TYR TYR A . n A 1 145 ALA 145 121 121 ALA ALA A . n A 1 146 GLU 146 122 122 GLU GLU A . n A 1 147 GLU 147 123 123 GLU GLU A . n A 1 148 ALA 148 124 124 ALA ALA A . n A 1 149 LYS 149 125 125 LYS LYS A . n A 1 150 VAL 150 126 126 VAL VAL A . n A 1 151 ALA 151 127 127 ALA ALA A . n A 1 152 VAL 152 128 128 VAL VAL A . n A 1 153 ARG 153 129 129 ARG ARG A . n A 1 154 ASN 154 130 130 ASN ASN A . n A 1 155 VAL 155 131 131 VAL VAL A . n A 1 156 ARG 156 132 132 ARG ARG A . n A 1 157 ARG 157 133 133 ARG ARG A . n A 1 158 ASP 158 134 134 ASP ASP A . n A 1 159 GLY 159 135 135 GLY GLY A . n A 1 160 ASN 160 136 136 ASN ASN A . n A 1 161 ASP 161 137 137 ASP ASP A . n A 1 162 ASP 162 138 138 ASP ASP A . n A 1 163 LEU 163 139 139 LEU LEU A . n A 1 164 LYS 164 140 140 LYS LYS A . n A 1 165 LYS 165 141 141 LYS LYS A . n A 1 166 LEU 166 142 142 LEU LEU A . n A 1 167 GLU 167 143 143 GLU GLU A . n A 1 168 LYS 168 144 144 LYS LYS A . n A 1 169 ALA 169 145 145 ALA ALA A . n A 1 170 GLY 170 146 146 GLY GLY A . n A 1 171 GLU 171 147 147 GLU GLU A . n A 1 172 ILE 172 148 148 ILE ILE A . n A 1 173 THR 173 149 149 THR THR A . n A 1 174 GLU 174 150 150 GLU GLU A . n A 1 175 ASP 175 151 151 ASP ASP A . n A 1 176 ASP 176 152 152 ASP ASP A . n A 1 177 LEU 177 153 153 LEU LEU A . n A 1 178 ARG 178 154 154 ARG ARG A . n A 1 179 GLY 179 155 155 GLY GLY A . n A 1 180 TYR 180 156 156 TYR TYR A . n A 1 181 THR 181 157 157 THR THR A . n A 1 182 GLU 182 158 158 GLU GLU A . n A 1 183 ASP 183 159 159 ASP ASP A . n A 1 184 ILE 184 160 160 ILE ILE A . n A 1 185 GLN 185 161 161 GLN GLN A . n A 1 186 LYS 186 162 162 LYS LYS A . n A 1 187 GLU 187 163 163 GLU GLU A . n A 1 188 THR 188 164 164 THR THR A . n A 1 189 ASP 189 165 165 ASP ASP A . n A 1 190 LYS 190 166 166 LYS LYS A . n A 1 191 TYR 191 167 167 TYR TYR A . n A 1 192 ILE 192 168 168 ILE ILE A . n A 1 193 ALA 193 169 169 ALA ALA A . n A 1 194 LYS 194 170 170 LYS LYS A . n A 1 195 VAL 195 171 171 VAL VAL A . n A 1 196 ASP 196 172 172 ASP ASP A . n A 1 197 GLU 197 173 173 GLU GLU A . n A 1 198 ILE 198 174 174 ILE ILE A . n A 1 199 ALA 199 175 175 ALA ALA A . n A 1 200 LYS 200 176 176 LYS LYS A . n A 1 201 ASN 201 177 177 ASN ASN A . n A 1 202 LYS 202 178 178 LYS LYS A . n A 1 203 GLU 203 179 179 GLU GLU A . n A 1 204 LYS 204 180 180 LYS LYS A . n A 1 205 GLU 205 181 181 GLU GLU A . n A 1 206 ILE 206 182 182 ILE ILE A . n A 1 207 MET 207 183 183 MET MET A . n A 1 208 GLU 208 184 184 GLU GLU A . n A 1 209 VAL 209 185 185 VAL VAL A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 CL 1 201 1 CL CL A . C 2 CL 1 202 2 CL CL A . D 3 GOL 1 203 3 GOL GOL A . E 3 GOL 1 204 4 GOL GOL A . F 4 PO4 1 205 5 PO4 PO4 A . G 5 PEG 1 206 6 PEG PEG A . H 6 HOH 1 301 7 HOH HOH A . H 6 HOH 2 302 8 HOH HOH A . H 6 HOH 3 303 9 HOH HOH A . H 6 HOH 4 304 10 HOH HOH A . H 6 HOH 5 305 11 HOH HOH A . H 6 HOH 6 306 12 HOH HOH A . H 6 HOH 7 307 13 HOH HOH A . H 6 HOH 8 308 14 HOH HOH A . H 6 HOH 9 309 15 HOH HOH A . H 6 HOH 10 310 16 HOH HOH A . H 6 HOH 11 311 17 HOH HOH A . H 6 HOH 12 312 18 HOH HOH A . H 6 HOH 13 313 19 HOH HOH A . H 6 HOH 14 314 20 HOH HOH A . H 6 HOH 15 315 21 HOH HOH A . H 6 HOH 16 316 22 HOH HOH A . H 6 HOH 17 317 23 HOH HOH A . H 6 HOH 18 318 24 HOH HOH A . H 6 HOH 19 319 25 HOH HOH A . H 6 HOH 20 320 26 HOH HOH A . H 6 HOH 21 321 27 HOH HOH A . H 6 HOH 22 322 28 HOH HOH A . H 6 HOH 23 323 29 HOH HOH A . H 6 HOH 24 324 30 HOH HOH A . H 6 HOH 25 325 31 HOH HOH A . H 6 HOH 26 326 32 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-08-15 2 'Structure model' 1 1 2017-11-15 3 'Structure model' 1 2 2023-09-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Refinement description' 2 3 'Structure model' 'Data collection' 3 3 'Structure model' 'Database references' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' software 2 3 'Structure model' chem_comp_atom 3 3 'Structure model' chem_comp_bond 4 3 'Structure model' database_2 5 3 'Structure model' pdbx_initial_refinement_model 6 3 'Structure model' struct_ref_seq_dif 7 3 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_software.name' 2 3 'Structure model' '_database_2.pdbx_DOI' 3 3 'Structure model' '_database_2.pdbx_database_accession' 4 3 'Structure model' '_struct_ref_seq_dif.details' 5 3 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 3 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 3 'Structure model' '_struct_site.pdbx_auth_seq_id' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -35.3301 -4.3298 -25.9272 0.0968 0.0921 0.1009 0.0652 -0.0020 0.0150 17.9567 13.0569 6.1911 -12.5864 -9.3650 7.2393 -0.2813 0.1205 -0.7760 0.0133 -0.2259 0.7380 -0.0908 -0.3337 0.5072 'X-RAY DIFFRACTION' 2 ? refined -24.0464 -33.5691 -40.0420 0.1686 0.0690 0.0364 0.0704 0.0412 0.0004 5.3094 4.9219 1.4776 1.9088 1.0180 0.8444 0.0193 0.2560 -0.1387 -0.1972 0.0129 -0.2016 0.2240 0.0283 -0.0322 'X-RAY DIFFRACTION' 3 ? refined -16.3705 -38.0068 -40.4416 0.1641 0.1549 0.3920 0.0282 0.0504 -0.0270 7.0819 4.9359 11.3832 -1.4711 1.6321 -2.1323 -0.0867 0.2278 -0.3629 0.0344 0.0489 -0.8778 0.2093 1.2117 0.0378 'X-RAY DIFFRACTION' 4 ? refined -18.0256 -9.7979 -34.8085 0.1612 0.1258 0.3270 0.0325 0.1137 0.0403 3.2554 3.8984 1.0569 -2.7147 -0.2399 0.9488 0.1130 0.2505 0.7833 -0.2567 0.0372 -1.0467 -0.1703 0.0847 -0.1502 'X-RAY DIFFRACTION' 5 ? refined -43.4611 13.1633 -22.9803 0.2879 0.1249 0.2483 0.1240 -0.1257 -0.0476 11.1674 14.1386 3.3214 -6.4997 -1.3992 3.1786 0.1518 0.6303 0.3743 -0.5075 -0.2314 -0.3532 -0.7332 -0.1359 0.0797 'X-RAY DIFFRACTION' 6 ? refined -27.1537 1.0191 -20.7186 0.2516 0.1728 0.2976 0.1028 -0.1171 -0.1194 14.2613 11.8274 4.2459 -11.2080 -6.0929 6.1686 -0.8259 -0.9395 0.9671 0.8709 0.8096 -0.8259 0.2602 0.2271 0.0163 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 0 ? ? A 28 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 29 ? ? A 78 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 79 ? ? A 97 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 98 ? ? A 131 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 132 ? ? A 149 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 A 150 ? ? A 185 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal Blu-Ice 'data collection' Max ? 1 BALBES phasing . ? 2 REFMAC refinement 5.5.0102 ? 3 HKL-3000 'data reduction' . ? 4 HKL-3000 'data scaling' . ? 5 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 63 ? ? -93.54 30.53 2 1 GLU A 184 ? ? -95.63 56.19 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -23 ? A MET 1 2 1 Y 1 A HIS -22 ? A HIS 2 3 1 Y 1 A HIS -21 ? A HIS 3 4 1 Y 1 A HIS -20 ? A HIS 4 5 1 Y 1 A HIS -19 ? A HIS 5 6 1 Y 1 A HIS -18 ? A HIS 6 7 1 Y 1 A HIS -17 ? A HIS 7 8 1 Y 1 A SER -16 ? A SER 8 9 1 Y 1 A SER -15 ? A SER 9 10 1 Y 1 A GLY -14 ? A GLY 10 11 1 Y 1 A VAL -13 ? A VAL 11 12 1 Y 1 A ASP -12 ? A ASP 12 13 1 Y 1 A LEU -11 ? A LEU 13 14 1 Y 1 A GLY -10 ? A GLY 14 15 1 Y 1 A THR -9 ? A THR 15 16 1 Y 1 A GLU -8 ? A GLU 16 17 1 Y 1 A ASN -7 ? A ASN 17 18 1 Y 1 A LEU -6 ? A LEU 18 19 1 Y 1 A TYR -5 ? A TYR 19 20 1 Y 1 A PHE -4 ? A PHE 20 21 1 Y 1 A GLN -3 ? A GLN 21 22 1 Y 1 A SER -2 ? A SER 22 23 1 Y 1 A ASN -1 ? A ASN 23 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CL CL CL N N 74 GLN N N N N 75 GLN CA C N S 76 GLN C C N N 77 GLN O O N N 78 GLN CB C N N 79 GLN CG C N N 80 GLN CD C N N 81 GLN OE1 O N N 82 GLN NE2 N N N 83 GLN OXT O N N 84 GLN H H N N 85 GLN H2 H N N 86 GLN HA H N N 87 GLN HB2 H N N 88 GLN HB3 H N N 89 GLN HG2 H N N 90 GLN HG3 H N N 91 GLN HE21 H N N 92 GLN HE22 H N N 93 GLN HXT H N N 94 GLU N N N N 95 GLU CA C N S 96 GLU C C N N 97 GLU O O N N 98 GLU CB C N N 99 GLU CG C N N 100 GLU CD C N N 101 GLU OE1 O N N 102 GLU OE2 O N N 103 GLU OXT O N N 104 GLU H H N N 105 GLU H2 H N N 106 GLU HA H N N 107 GLU HB2 H N N 108 GLU HB3 H N N 109 GLU HG2 H N N 110 GLU HG3 H N N 111 GLU HE2 H N N 112 GLU HXT H N N 113 GLY N N N N 114 GLY CA C N N 115 GLY C C N N 116 GLY O O N N 117 GLY OXT O N N 118 GLY H H N N 119 GLY H2 H N N 120 GLY HA2 H N N 121 GLY HA3 H N N 122 GLY HXT H N N 123 GOL C1 C N N 124 GOL O1 O N N 125 GOL C2 C N N 126 GOL O2 O N N 127 GOL C3 C N N 128 GOL O3 O N N 129 GOL H11 H N N 130 GOL H12 H N N 131 GOL HO1 H N N 132 GOL H2 H N N 133 GOL HO2 H N N 134 GOL H31 H N N 135 GOL H32 H N N 136 GOL HO3 H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 HOH O O N N 159 HOH H1 H N N 160 HOH H2 H N N 161 ILE N N N N 162 ILE CA C N S 163 ILE C C N N 164 ILE O O N N 165 ILE CB C N S 166 ILE CG1 C N N 167 ILE CG2 C N N 168 ILE CD1 C N N 169 ILE OXT O N N 170 ILE H H N N 171 ILE H2 H N N 172 ILE HA H N N 173 ILE HB H N N 174 ILE HG12 H N N 175 ILE HG13 H N N 176 ILE HG21 H N N 177 ILE HG22 H N N 178 ILE HG23 H N N 179 ILE HD11 H N N 180 ILE HD12 H N N 181 ILE HD13 H N N 182 ILE HXT H N N 183 LEU N N N N 184 LEU CA C N S 185 LEU C C N N 186 LEU O O N N 187 LEU CB C N N 188 LEU CG C N N 189 LEU CD1 C N N 190 LEU CD2 C N N 191 LEU OXT O N N 192 LEU H H N N 193 LEU H2 H N N 194 LEU HA H N N 195 LEU HB2 H N N 196 LEU HB3 H N N 197 LEU HG H N N 198 LEU HD11 H N N 199 LEU HD12 H N N 200 LEU HD13 H N N 201 LEU HD21 H N N 202 LEU HD22 H N N 203 LEU HD23 H N N 204 LEU HXT H N N 205 LYS N N N N 206 LYS CA C N S 207 LYS C C N N 208 LYS O O N N 209 LYS CB C N N 210 LYS CG C N N 211 LYS CD C N N 212 LYS CE C N N 213 LYS NZ N N N 214 LYS OXT O N N 215 LYS H H N N 216 LYS H2 H N N 217 LYS HA H N N 218 LYS HB2 H N N 219 LYS HB3 H N N 220 LYS HG2 H N N 221 LYS HG3 H N N 222 LYS HD2 H N N 223 LYS HD3 H N N 224 LYS HE2 H N N 225 LYS HE3 H N N 226 LYS HZ1 H N N 227 LYS HZ2 H N N 228 LYS HZ3 H N N 229 LYS HXT H N N 230 MET N N N N 231 MET CA C N S 232 MET C C N N 233 MET O O N N 234 MET CB C N N 235 MET CG C N N 236 MET SD S N N 237 MET CE C N N 238 MET OXT O N N 239 MET H H N N 240 MET H2 H N N 241 MET HA H N N 242 MET HB2 H N N 243 MET HB3 H N N 244 MET HG2 H N N 245 MET HG3 H N N 246 MET HE1 H N N 247 MET HE2 H N N 248 MET HE3 H N N 249 MET HXT H N N 250 PEG C1 C N N 251 PEG O1 O N N 252 PEG C2 C N N 253 PEG O2 O N N 254 PEG C3 C N N 255 PEG C4 C N N 256 PEG O4 O N N 257 PEG H11 H N N 258 PEG H12 H N N 259 PEG HO1 H N N 260 PEG H21 H N N 261 PEG H22 H N N 262 PEG H31 H N N 263 PEG H32 H N N 264 PEG H41 H N N 265 PEG H42 H N N 266 PEG HO4 H N N 267 PHE N N N N 268 PHE CA C N S 269 PHE C C N N 270 PHE O O N N 271 PHE CB C N N 272 PHE CG C Y N 273 PHE CD1 C Y N 274 PHE CD2 C Y N 275 PHE CE1 C Y N 276 PHE CE2 C Y N 277 PHE CZ C Y N 278 PHE OXT O N N 279 PHE H H N N 280 PHE H2 H N N 281 PHE HA H N N 282 PHE HB2 H N N 283 PHE HB3 H N N 284 PHE HD1 H N N 285 PHE HD2 H N N 286 PHE HE1 H N N 287 PHE HE2 H N N 288 PHE HZ H N N 289 PHE HXT H N N 290 PO4 P P N N 291 PO4 O1 O N N 292 PO4 O2 O N N 293 PO4 O3 O N N 294 PO4 O4 O N N 295 PRO N N N N 296 PRO CA C N S 297 PRO C C N N 298 PRO O O N N 299 PRO CB C N N 300 PRO CG C N N 301 PRO CD C N N 302 PRO OXT O N N 303 PRO H H N N 304 PRO HA H N N 305 PRO HB2 H N N 306 PRO HB3 H N N 307 PRO HG2 H N N 308 PRO HG3 H N N 309 PRO HD2 H N N 310 PRO HD3 H N N 311 PRO HXT H N N 312 SER N N N N 313 SER CA C N S 314 SER C C N N 315 SER O O N N 316 SER CB C N N 317 SER OG O N N 318 SER OXT O N N 319 SER H H N N 320 SER H2 H N N 321 SER HA H N N 322 SER HB2 H N N 323 SER HB3 H N N 324 SER HG H N N 325 SER HXT H N N 326 THR N N N N 327 THR CA C N S 328 THR C C N N 329 THR O O N N 330 THR CB C N R 331 THR OG1 O N N 332 THR CG2 C N N 333 THR OXT O N N 334 THR H H N N 335 THR H2 H N N 336 THR HA H N N 337 THR HB H N N 338 THR HG1 H N N 339 THR HG21 H N N 340 THR HG22 H N N 341 THR HG23 H N N 342 THR HXT H N N 343 TYR N N N N 344 TYR CA C N S 345 TYR C C N N 346 TYR O O N N 347 TYR CB C N N 348 TYR CG C Y N 349 TYR CD1 C Y N 350 TYR CD2 C Y N 351 TYR CE1 C Y N 352 TYR CE2 C Y N 353 TYR CZ C Y N 354 TYR OH O N N 355 TYR OXT O N N 356 TYR H H N N 357 TYR H2 H N N 358 TYR HA H N N 359 TYR HB2 H N N 360 TYR HB3 H N N 361 TYR HD1 H N N 362 TYR HD2 H N N 363 TYR HE1 H N N 364 TYR HE2 H N N 365 TYR HH H N N 366 TYR HXT H N N 367 VAL N N N N 368 VAL CA C N S 369 VAL C C N N 370 VAL O O N N 371 VAL CB C N N 372 VAL CG1 C N N 373 VAL CG2 C N N 374 VAL OXT O N N 375 VAL H H N N 376 VAL H2 H N N 377 VAL HA H N N 378 VAL HB H N N 379 VAL HG11 H N N 380 VAL HG12 H N N 381 VAL HG13 H N N 382 VAL HG21 H N N 383 VAL HG22 H N N 384 VAL HG23 H N N 385 VAL HXT H N N 386 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GOL C1 O1 sing N N 116 GOL C1 C2 sing N N 117 GOL C1 H11 sing N N 118 GOL C1 H12 sing N N 119 GOL O1 HO1 sing N N 120 GOL C2 O2 sing N N 121 GOL C2 C3 sing N N 122 GOL C2 H2 sing N N 123 GOL O2 HO2 sing N N 124 GOL C3 O3 sing N N 125 GOL C3 H31 sing N N 126 GOL C3 H32 sing N N 127 GOL O3 HO3 sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MET N CA sing N N 218 MET N H sing N N 219 MET N H2 sing N N 220 MET CA C sing N N 221 MET CA CB sing N N 222 MET CA HA sing N N 223 MET C O doub N N 224 MET C OXT sing N N 225 MET CB CG sing N N 226 MET CB HB2 sing N N 227 MET CB HB3 sing N N 228 MET CG SD sing N N 229 MET CG HG2 sing N N 230 MET CG HG3 sing N N 231 MET SD CE sing N N 232 MET CE HE1 sing N N 233 MET CE HE2 sing N N 234 MET CE HE3 sing N N 235 MET OXT HXT sing N N 236 PEG C1 O1 sing N N 237 PEG C1 C2 sing N N 238 PEG C1 H11 sing N N 239 PEG C1 H12 sing N N 240 PEG O1 HO1 sing N N 241 PEG C2 O2 sing N N 242 PEG C2 H21 sing N N 243 PEG C2 H22 sing N N 244 PEG O2 C3 sing N N 245 PEG C3 C4 sing N N 246 PEG C3 H31 sing N N 247 PEG C3 H32 sing N N 248 PEG C4 O4 sing N N 249 PEG C4 H41 sing N N 250 PEG C4 H42 sing N N 251 PEG O4 HO4 sing N N 252 PHE N CA sing N N 253 PHE N H sing N N 254 PHE N H2 sing N N 255 PHE CA C sing N N 256 PHE CA CB sing N N 257 PHE CA HA sing N N 258 PHE C O doub N N 259 PHE C OXT sing N N 260 PHE CB CG sing N N 261 PHE CB HB2 sing N N 262 PHE CB HB3 sing N N 263 PHE CG CD1 doub Y N 264 PHE CG CD2 sing Y N 265 PHE CD1 CE1 sing Y N 266 PHE CD1 HD1 sing N N 267 PHE CD2 CE2 doub Y N 268 PHE CD2 HD2 sing N N 269 PHE CE1 CZ doub Y N 270 PHE CE1 HE1 sing N N 271 PHE CE2 CZ sing Y N 272 PHE CE2 HE2 sing N N 273 PHE CZ HZ sing N N 274 PHE OXT HXT sing N N 275 PO4 P O1 doub N N 276 PO4 P O2 sing N N 277 PO4 P O3 sing N N 278 PO4 P O4 sing N N 279 PRO N CA sing N N 280 PRO N CD sing N N 281 PRO N H sing N N 282 PRO CA C sing N N 283 PRO CA CB sing N N 284 PRO CA HA sing N N 285 PRO C O doub N N 286 PRO C OXT sing N N 287 PRO CB CG sing N N 288 PRO CB HB2 sing N N 289 PRO CB HB3 sing N N 290 PRO CG CD sing N N 291 PRO CG HG2 sing N N 292 PRO CG HG3 sing N N 293 PRO CD HD2 sing N N 294 PRO CD HD3 sing N N 295 PRO OXT HXT sing N N 296 SER N CA sing N N 297 SER N H sing N N 298 SER N H2 sing N N 299 SER CA C sing N N 300 SER CA CB sing N N 301 SER CA HA sing N N 302 SER C O doub N N 303 SER C OXT sing N N 304 SER CB OG sing N N 305 SER CB HB2 sing N N 306 SER CB HB3 sing N N 307 SER OG HG sing N N 308 SER OXT HXT sing N N 309 THR N CA sing N N 310 THR N H sing N N 311 THR N H2 sing N N 312 THR CA C sing N N 313 THR CA CB sing N N 314 THR CA HA sing N N 315 THR C O doub N N 316 THR C OXT sing N N 317 THR CB OG1 sing N N 318 THR CB CG2 sing N N 319 THR CB HB sing N N 320 THR OG1 HG1 sing N N 321 THR CG2 HG21 sing N N 322 THR CG2 HG22 sing N N 323 THR CG2 HG23 sing N N 324 THR OXT HXT sing N N 325 TYR N CA sing N N 326 TYR N H sing N N 327 TYR N H2 sing N N 328 TYR CA C sing N N 329 TYR CA CB sing N N 330 TYR CA HA sing N N 331 TYR C O doub N N 332 TYR C OXT sing N N 333 TYR CB CG sing N N 334 TYR CB HB2 sing N N 335 TYR CB HB3 sing N N 336 TYR CG CD1 doub Y N 337 TYR CG CD2 sing Y N 338 TYR CD1 CE1 sing Y N 339 TYR CD1 HD1 sing N N 340 TYR CD2 CE2 doub Y N 341 TYR CD2 HD2 sing N N 342 TYR CE1 CZ doub Y N 343 TYR CE1 HE1 sing N N 344 TYR CE2 CZ sing Y N 345 TYR CE2 HE2 sing N N 346 TYR CZ OH sing N N 347 TYR OH HH sing N N 348 TYR OXT HXT sing N N 349 VAL N CA sing N N 350 VAL N H sing N N 351 VAL N H2 sing N N 352 VAL CA C sing N N 353 VAL CA CB sing N N 354 VAL CA HA sing N N 355 VAL C O doub N N 356 VAL C OXT sing N N 357 VAL CB CG1 sing N N 358 VAL CB CG2 sing N N 359 VAL CB HB sing N N 360 VAL CG1 HG11 sing N N 361 VAL CG1 HG12 sing N N 362 VAL CG1 HG13 sing N N 363 VAL CG2 HG21 sing N N 364 VAL CG2 HG22 sing N N 365 VAL CG2 HG23 sing N N 366 VAL OXT HXT sing N N 367 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'CHLORIDE ION' CL 3 GLYCEROL GOL 4 'PHOSPHATE ION' PO4 5 'DI(HYDROXYETHYL)ETHER' PEG 6 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 1EK8 _pdbx_initial_refinement_model.details 'PDB ENTRY 1EK8' #