HEADER CELL ADHESION 16-AUG-12 4GMV TITLE CRYSTAL STRUCTURE OF THE COILED-COIL, RA AND PH DOMAINS OF TITLE 2 LAMELLIPODIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: RAS-ASSOCIATED AND PLECKSTRIN HOMOLOGY DOMAINS-CONTAINING COMPND 3 PROTEIN 1; COMPND 4 CHAIN: A, B; COMPND 5 FRAGMENT: COILED-COIL, RA, PH DOMAIN (UNP RESIDUES 240-520); COMPND 6 SYNONYM: RAPH1, AMYOTROPHIC LATERAL SCLEROSIS 2 CHROMOSOMAL REGION COMPND 7 CANDIDATE GENE 18 PROTEIN, AMYOTROPHIC LATERAL SCLEROSIS 2 COMPND 8 CHROMOSOMAL REGION CANDIDATE GENE 9 PROTEIN, LAMELLIPODIN, PROLINE- COMPND 9 RICH EVH1 LIGAND 2, PREL-2, PROTEIN RMO1; COMPND 10 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: RAPH1, ALS2CR18, ALS2CR9, KIAA1681, LPD, PREL2, RMO1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A KEYWDS RA-PH, COILED-COIL REGION, RAS-ASSOCIATION DOMAIN, PLECKSTRIN KEYWDS 2 HOMOLOGY DOMAIN, CYTOSKELETAL PROTEIN, ENA/VASP BINDING, CELL KEYWDS 3 MIGRATION, CELL ADHESION EXPDTA X-RAY DIFFRACTION AUTHOR Y.C.E.CHANG,J.WU REVDAT 3 13-SEP-23 4GMV 1 REMARK REVDAT 2 27-MAR-13 4GMV 1 JRNL REVDAT 1 28-NOV-12 4GMV 0 JRNL AUTH Y.C.CHANG,H.ZHANG,M.L.BRENNAN,J.WU JRNL TITL CRYSTAL STRUCTURE OF LAMELLIPODIN IMPLICATES DIVERSE JRNL TITL 2 FUNCTIONS IN ACTIN POLYMERIZATION AND RAS SIGNALING. JRNL REF PROTEIN CELL V. 4 211 2013 JRNL REFN ISSN 1674-800X JRNL PMID 23483482 JRNL DOI 10.1007/S13238-013-2082-5 REMARK 2 REMARK 2 RESOLUTION. 2.40 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.40 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.96 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.6 REMARK 3 NUMBER OF REFLECTIONS : 24426 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.242 REMARK 3 R VALUE (WORKING SET) : 0.240 REMARK 3 FREE R VALUE : 0.283 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1285 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.40 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.47 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1478 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.22 REMARK 3 BIN R VALUE (WORKING SET) : 0.2920 REMARK 3 BIN FREE R VALUE SET COUNT : 79 REMARK 3 BIN FREE R VALUE : 0.4100 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4345 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 101 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 50.18 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.02000 REMARK 3 B22 (A**2) : -0.02000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -0.03000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.489 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.300 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.225 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 19.118 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.924 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.894 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4441 ; 0.007 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5977 ; 1.151 ; 1.962 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 523 ; 5.790 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 220 ;39.194 ;24.455 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 883 ;17.352 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 28 ;19.774 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 648 ; 0.081 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 3284 ; 0.004 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 252 A 520 REMARK 3 ORIGIN FOR THE GROUP (A): 36.3445 -2.5588 1.3905 REMARK 3 T TENSOR REMARK 3 T11: 0.1578 T22: 0.2641 REMARK 3 T33: 0.1056 T12: -0.0253 REMARK 3 T13: 0.1240 T23: 0.0016 REMARK 3 L TENSOR REMARK 3 L11: 2.7261 L22: 5.7399 REMARK 3 L33: 2.4340 L12: -1.0114 REMARK 3 L13: 1.9619 L23: -0.8034 REMARK 3 S TENSOR REMARK 3 S11: 0.0213 S12: -0.0031 S13: 0.0763 REMARK 3 S21: -0.0613 S22: -0.1442 S23: -0.0640 REMARK 3 S31: 0.0144 S32: -0.0367 S33: 0.1229 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 252 B 520 REMARK 3 ORIGIN FOR THE GROUP (A): 62.6992 -64.3721 24.1456 REMARK 3 T TENSOR REMARK 3 T11: 0.0722 T22: 0.1664 REMARK 3 T33: 0.0966 T12: -0.0200 REMARK 3 T13: 0.0717 T23: -0.0264 REMARK 3 L TENSOR REMARK 3 L11: 2.6410 L22: 4.0162 REMARK 3 L33: 2.2917 L12: -0.9760 REMARK 3 L13: 1.6406 L23: -0.7694 REMARK 3 S TENSOR REMARK 3 S11: -0.0951 S12: 0.0645 S13: 0.1212 REMARK 3 S21: -0.0366 S22: 0.0046 S23: -0.0110 REMARK 3 S31: -0.0943 S32: 0.0099 S33: 0.0905 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4GMV COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074382. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-JUN-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X4C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97915 REMARK 200 MONOCHROMATOR : BENT SINGLE CRYSTAL REMARK 200 MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24426 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.400 REMARK 200 RESOLUTION RANGE LOW (A) : 38.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.4 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.40 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.44 REMARK 200 COMPLETENESS FOR SHELL (%) : 79.9 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: ARP/WARP REMARK 200 STARTING MODEL: PDB ENTRY 3TCA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.27 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.63 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 50 MM SODIUM FORMATE, 20% (W/V) REMARK 280 POLYETHYLENE GLYCOL 3350, 30% (V/V) ETHYLENE GLYCOL, PH 7.0, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298.0K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 58.80850 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 48.48600 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 58.80850 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 48.48600 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLN A 240 REMARK 465 PRO A 241 REMARK 465 ILE A 242 REMARK 465 THR A 243 REMARK 465 GLU A 244 REMARK 465 GLU A 245 REMARK 465 GLU A 246 REMARK 465 GLN A 247 REMARK 465 ALA A 248 REMARK 465 ALA A 249 REMARK 465 LYS A 250 REMARK 465 LEU A 251 REMARK 465 PRO A 429 REMARK 465 LYS A 430 REMARK 465 GLY A 431 REMARK 465 LYS A 432 REMARK 465 ALA A 433 REMARK 465 LYS A 434 REMARK 465 VAL A 435 REMARK 465 SER A 436 REMARK 465 ARG A 437 REMARK 465 GLN B 240 REMARK 465 PRO B 241 REMARK 465 ILE B 242 REMARK 465 THR B 243 REMARK 465 GLU B 244 REMARK 465 GLU B 245 REMARK 465 GLU B 246 REMARK 465 GLN B 247 REMARK 465 ALA B 248 REMARK 465 ALA B 249 REMARK 465 LYS B 250 REMARK 465 LEU B 251 REMARK 465 LYS B 430 REMARK 465 GLY B 431 REMARK 465 LYS B 432 REMARK 465 ALA B 433 REMARK 465 LYS B 434 REMARK 465 VAL B 435 REMARK 465 SER B 436 REMARK 465 ARG B 437 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ARG A 353 88.43 -171.06 REMARK 500 SER B 304 -155.56 -110.65 REMARK 500 HIS B 305 -140.55 52.18 REMARK 500 TYR B 366 -15.06 -145.89 REMARK 500 LYS B 411 48.50 -94.49 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GN1 RELATED DB: PDB REMARK 900 THE SAME PROTEIN BUT ONLY ENCOMPASS RA AND PH DOMAINS DBREF 4GMV A 240 520 UNP Q70E73 RAPH1_HUMAN 240 520 DBREF 4GMV B 240 520 UNP Q70E73 RAPH1_HUMAN 240 520 SEQRES 1 A 281 GLN PRO ILE THR GLU GLU GLU GLN ALA ALA LYS LEU LYS SEQRES 2 A 281 ALA GLU LYS ILE ARG VAL ALA LEU GLU LYS ILE LYS GLU SEQRES 3 A 281 ALA GLN VAL LYS LYS LEU VAL ILE ARG VAL HIS MET SER SEQRES 4 A 281 ASP ASP SER SER LYS THR MET MET VAL ASP GLU ARG GLN SEQRES 5 A 281 THR VAL ARG GLN VAL LEU ASP ASN LEU MET ASP LYS SER SEQRES 6 A 281 HIS CYS GLY TYR SER LEU ASP TRP SER LEU VAL GLU THR SEQRES 7 A 281 VAL SER GLU LEU GLN MET GLU ARG ILE PHE GLU ASP HIS SEQRES 8 A 281 GLU ASN LEU VAL GLU ASN LEU LEU ASN TRP THR ARG ASP SEQRES 9 A 281 SER GLN ASN LYS LEU ILE PHE MET GLU ARG ILE GLU LYS SEQRES 10 A 281 TYR ALA LEU PHE LYS ASN PRO GLN ASN TYR LEU LEU GLY SEQRES 11 A 281 LYS LYS GLU THR ALA GLU MET ALA ASP ARG ASN LYS GLU SEQRES 12 A 281 VAL LEU LEU GLU GLU CYS PHE CYS GLY SER SER VAL THR SEQRES 13 A 281 VAL PRO GLU ILE GLU GLY VAL LEU TRP LEU LYS ASP ASP SEQRES 14 A 281 GLY LYS LYS SER TRP LYS LYS ARG TYR PHE LEU LEU ARG SEQRES 15 A 281 ALA SER GLY ILE TYR TYR VAL PRO LYS GLY LYS ALA LYS SEQRES 16 A 281 VAL SER ARG ASP LEU VAL CYS PHE LEU GLN LEU ASP HIS SEQRES 17 A 281 VAL ASN VAL TYR TYR GLY GLN ASP TYR ARG ASN LYS TYR SEQRES 18 A 281 LYS ALA PRO THR ASP TYR CYS LEU VAL LEU LYS HIS PRO SEQRES 19 A 281 GLN ILE GLN LYS LYS SER GLN TYR ILE LYS TYR LEU CYS SEQRES 20 A 281 CYS ASP ASP VAL ARG THR LEU HIS GLN TRP VAL ASN GLY SEQRES 21 A 281 ILE ARG ILE ALA LYS TYR GLY LYS GLN LEU TYR MET ASN SEQRES 22 A 281 TYR GLN GLU ALA LEU LYS ARG THR SEQRES 1 B 281 GLN PRO ILE THR GLU GLU GLU GLN ALA ALA LYS LEU LYS SEQRES 2 B 281 ALA GLU LYS ILE ARG VAL ALA LEU GLU LYS ILE LYS GLU SEQRES 3 B 281 ALA GLN VAL LYS LYS LEU VAL ILE ARG VAL HIS MET SER SEQRES 4 B 281 ASP ASP SER SER LYS THR MET MET VAL ASP GLU ARG GLN SEQRES 5 B 281 THR VAL ARG GLN VAL LEU ASP ASN LEU MET ASP LYS SER SEQRES 6 B 281 HIS CYS GLY TYR SER LEU ASP TRP SER LEU VAL GLU THR SEQRES 7 B 281 VAL SER GLU LEU GLN MET GLU ARG ILE PHE GLU ASP HIS SEQRES 8 B 281 GLU ASN LEU VAL GLU ASN LEU LEU ASN TRP THR ARG ASP SEQRES 9 B 281 SER GLN ASN LYS LEU ILE PHE MET GLU ARG ILE GLU LYS SEQRES 10 B 281 TYR ALA LEU PHE LYS ASN PRO GLN ASN TYR LEU LEU GLY SEQRES 11 B 281 LYS LYS GLU THR ALA GLU MET ALA ASP ARG ASN LYS GLU SEQRES 12 B 281 VAL LEU LEU GLU GLU CYS PHE CYS GLY SER SER VAL THR SEQRES 13 B 281 VAL PRO GLU ILE GLU GLY VAL LEU TRP LEU LYS ASP ASP SEQRES 14 B 281 GLY LYS LYS SER TRP LYS LYS ARG TYR PHE LEU LEU ARG SEQRES 15 B 281 ALA SER GLY ILE TYR TYR VAL PRO LYS GLY LYS ALA LYS SEQRES 16 B 281 VAL SER ARG ASP LEU VAL CYS PHE LEU GLN LEU ASP HIS SEQRES 17 B 281 VAL ASN VAL TYR TYR GLY GLN ASP TYR ARG ASN LYS TYR SEQRES 18 B 281 LYS ALA PRO THR ASP TYR CYS LEU VAL LEU LYS HIS PRO SEQRES 19 B 281 GLN ILE GLN LYS LYS SER GLN TYR ILE LYS TYR LEU CYS SEQRES 20 B 281 CYS ASP ASP VAL ARG THR LEU HIS GLN TRP VAL ASN GLY SEQRES 21 B 281 ILE ARG ILE ALA LYS TYR GLY LYS GLN LEU TYR MET ASN SEQRES 22 B 281 TYR GLN GLU ALA LEU LYS ARG THR FORMUL 3 HOH *101(H2 O) HELIX 1 1 GLU A 254 GLU A 265 1 12 HELIX 2 2 THR A 292 SER A 304 1 13 HELIX 3 3 SER A 319 LEU A 321 5 3 HELIX 4 4 ASN A 332 LEU A 338 1 7 HELIX 5 5 ARG A 353 LYS A 356 5 4 HELIX 6 6 TYR A 357 ASN A 362 1 6 HELIX 7 7 PRO A 363 TYR A 366 5 4 HELIX 8 8 ALA A 377 CYS A 390 1 14 HELIX 9 9 GLN A 444 VAL A 448 5 5 HELIX 10 10 ASP A 455 TYR A 460 1 6 HELIX 11 11 ASP A 489 GLY A 506 1 18 HELIX 12 12 GLY A 506 LYS A 518 1 13 HELIX 13 13 ALA B 253 ARG B 257 5 5 HELIX 14 14 VAL B 258 VAL B 268 1 11 HELIX 15 15 THR B 292 LYS B 303 1 12 HELIX 16 16 ASN B 332 LEU B 338 1 7 HELIX 17 17 ILE B 354 LYS B 356 5 3 HELIX 18 18 TYR B 357 ASN B 362 1 6 HELIX 19 19 PRO B 363 TYR B 366 5 4 HELIX 20 20 ALA B 377 CYS B 390 1 14 HELIX 21 21 ASP B 446 VAL B 448 5 3 HELIX 22 22 ASP B 455 TYR B 460 1 6 HELIX 23 23 ASP B 489 GLY B 506 1 18 HELIX 24 24 GLY B 506 LYS B 518 1 13 SHEET 1 A12 SER A 282 ASP A 288 0 SHEET 2 A12 LYS A 270 MET A 277 -1 N LEU A 271 O VAL A 287 SHEET 3 A12 LYS A 347 MET A 351 1 O PHE A 350 N HIS A 276 SHEET 4 A12 SER A 313 VAL A 318 -1 N SER A 313 O MET A 351 SHEET 5 A12 MET A 323 ILE A 326 -1 O MET A 323 N VAL A 318 SHEET 6 A12 ASN A 449 GLY A 453 -1 O TYR A 452 N GLU A 324 SHEET 7 A12 CYS A 467 LYS A 471 -1 O VAL A 469 N TYR A 451 SHEET 8 A12 LYS A 483 CYS A 486 -1 O LYS A 483 N LEU A 470 SHEET 9 A12 GLU A 400 LYS A 406 -1 N TRP A 404 O CYS A 486 SHEET 10 A12 TRP A 413 LEU A 420 -1 O LYS A 414 N LEU A 405 SHEET 11 A12 ILE A 425 TYR A 427 -1 O TYR A 426 N LEU A 419 SHEET 12 A12 VAL A 440 LEU A 443 -1 O VAL A 440 N TYR A 427 SHEET 1 B12 SER B 282 ASP B 288 0 SHEET 2 B12 LYS B 270 MET B 277 -1 N LEU B 271 O VAL B 287 SHEET 3 B12 LYS B 347 GLU B 352 1 O LEU B 348 N HIS B 276 SHEET 4 B12 TRP B 312 VAL B 318 -1 N VAL B 315 O ILE B 349 SHEET 5 B12 MET B 323 ILE B 326 -1 O MET B 323 N VAL B 318 SHEET 6 B12 ASN B 449 GLY B 453 -1 O TYR B 452 N GLU B 324 SHEET 7 B12 CYS B 467 LYS B 471 -1 O VAL B 469 N TYR B 451 SHEET 8 B12 LYS B 483 CYS B 486 -1 O LEU B 485 N LEU B 468 SHEET 9 B12 GLU B 400 LYS B 406 -1 N TRP B 404 O CYS B 486 SHEET 10 B12 TRP B 413 LEU B 420 -1 O PHE B 418 N GLY B 401 SHEET 11 B12 GLY B 424 VAL B 428 -1 O TYR B 426 N LEU B 419 SHEET 12 B12 VAL B 440 GLN B 444 -1 O PHE B 442 N ILE B 425 CISPEP 1 HIS A 305 CYS A 306 0 -3.50 CISPEP 2 LYS B 303 SER B 304 0 0.00 CISPEP 3 HIS B 305 CYS B 306 0 -11.91 CRYST1 117.617 96.972 76.824 90.00 126.99 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008502 0.000000 0.006405 0.00000 SCALE2 0.000000 0.010312 0.000000 0.00000 SCALE3 0.000000 0.000000 0.016297 0.00000