data_4GN4 # _entry.id 4GN4 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4GN4 RCSB RCSB074391 WWPDB D_1000074391 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4GLA . unspecified PDB 4GLV . unspecified PDB 4GN3 . unspecified PDB 4GN5 . unspecified # _pdbx_database_status.entry_id 4GN4 _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-08-16 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Steemson, J.D.' 1 'Liddament, M.T.' 2 # _citation.id primary _citation.title 'Tracking Molecular Recognition at the Atomic Level with a New Protein Scaffold Based on the OB-Fold.' _citation.journal_abbrev 'Plos One' _citation.journal_volume 9 _citation.page_first e86050 _citation.page_last e86050 _citation.year 2014 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 24465865 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0086050 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Steemson, J.D.' 1 primary 'Baake, M.' 2 primary 'Rakonjac, J.' 3 primary 'Arcus, V.L.' 4 primary 'Liddament, M.T.' 5 # _cell.length_a 50.430 _cell.length_b 58.330 _cell.length_c 81.820 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4GN4 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 4GN4 _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'OBody AM2EP06' 11845.485 1 ? ? ? ? 2 polymer nat 'Lysozyme C' 14331.160 1 3.2.1.17 ? 'UNP residues 19-147' ? 3 non-polymer syn GLYCEROL 92.094 5 ? ? ? ? 4 water nat water 18.015 242 ? ? ? ? # _entity_name_com.entity_id 2 _entity_name_com.name '1,4-beta-N-acetylmuramidase C, Allergen Gal d IV' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;AVYPKKTHWTAEITPNLHGSEVVVAGWVAHLGDYGRVKIVKVSDREGGAAVPVYLERGKTPDHLFKVFAELSREDVVVIK GIVEASEQYGSATGVEIFPSEIWILNKA ; ;AVYPKKTHWTAEITPNLHGSEVVVAGWVAHLGDYGRVKIVKVSDREGGAAVPVYLERGKTPDHLFKVFAELSREDVVVIK GIVEASEQYGSATGVEIFPSEIWILNKA ; B ? 2 'polypeptide(L)' no no ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; A ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 VAL n 1 3 TYR n 1 4 PRO n 1 5 LYS n 1 6 LYS n 1 7 THR n 1 8 HIS n 1 9 TRP n 1 10 THR n 1 11 ALA n 1 12 GLU n 1 13 ILE n 1 14 THR n 1 15 PRO n 1 16 ASN n 1 17 LEU n 1 18 HIS n 1 19 GLY n 1 20 SER n 1 21 GLU n 1 22 VAL n 1 23 VAL n 1 24 VAL n 1 25 ALA n 1 26 GLY n 1 27 TRP n 1 28 VAL n 1 29 ALA n 1 30 HIS n 1 31 LEU n 1 32 GLY n 1 33 ASP n 1 34 TYR n 1 35 GLY n 1 36 ARG n 1 37 VAL n 1 38 LYS n 1 39 ILE n 1 40 VAL n 1 41 LYS n 1 42 VAL n 1 43 SER n 1 44 ASP n 1 45 ARG n 1 46 GLU n 1 47 GLY n 1 48 GLY n 1 49 ALA n 1 50 ALA n 1 51 VAL n 1 52 PRO n 1 53 VAL n 1 54 TYR n 1 55 LEU n 1 56 GLU n 1 57 ARG n 1 58 GLY n 1 59 LYS n 1 60 THR n 1 61 PRO n 1 62 ASP n 1 63 HIS n 1 64 LEU n 1 65 PHE n 1 66 LYS n 1 67 VAL n 1 68 PHE n 1 69 ALA n 1 70 GLU n 1 71 LEU n 1 72 SER n 1 73 ARG n 1 74 GLU n 1 75 ASP n 1 76 VAL n 1 77 VAL n 1 78 VAL n 1 79 ILE n 1 80 LYS n 1 81 GLY n 1 82 ILE n 1 83 VAL n 1 84 GLU n 1 85 ALA n 1 86 SER n 1 87 GLU n 1 88 GLN n 1 89 TYR n 1 90 GLY n 1 91 SER n 1 92 ALA n 1 93 THR n 1 94 GLY n 1 95 VAL n 1 96 GLU n 1 97 ILE n 1 98 PHE n 1 99 PRO n 1 100 SER n 1 101 GLU n 1 102 ILE n 1 103 TRP n 1 104 ILE n 1 105 LEU n 1 106 ASN n 1 107 LYS n 1 108 ALA n 2 1 LYS n 2 2 VAL n 2 3 PHE n 2 4 GLY n 2 5 ARG n 2 6 CYS n 2 7 GLU n 2 8 LEU n 2 9 ALA n 2 10 ALA n 2 11 ALA n 2 12 MET n 2 13 LYS n 2 14 ARG n 2 15 HIS n 2 16 GLY n 2 17 LEU n 2 18 ASP n 2 19 ASN n 2 20 TYR n 2 21 ARG n 2 22 GLY n 2 23 TYR n 2 24 SER n 2 25 LEU n 2 26 GLY n 2 27 ASN n 2 28 TRP n 2 29 VAL n 2 30 CYS n 2 31 ALA n 2 32 ALA n 2 33 LYS n 2 34 PHE n 2 35 GLU n 2 36 SER n 2 37 ASN n 2 38 PHE n 2 39 ASN n 2 40 THR n 2 41 GLN n 2 42 ALA n 2 43 THR n 2 44 ASN n 2 45 ARG n 2 46 ASN n 2 47 THR n 2 48 ASP n 2 49 GLY n 2 50 SER n 2 51 THR n 2 52 ASP n 2 53 TYR n 2 54 GLY n 2 55 ILE n 2 56 LEU n 2 57 GLN n 2 58 ILE n 2 59 ASN n 2 60 SER n 2 61 ARG n 2 62 TRP n 2 63 TRP n 2 64 CYS n 2 65 ASN n 2 66 ASP n 2 67 GLY n 2 68 ARG n 2 69 THR n 2 70 PRO n 2 71 GLY n 2 72 SER n 2 73 ARG n 2 74 ASN n 2 75 LEU n 2 76 CYS n 2 77 ASN n 2 78 ILE n 2 79 PRO n 2 80 CYS n 2 81 SER n 2 82 ALA n 2 83 LEU n 2 84 LEU n 2 85 SER n 2 86 SER n 2 87 ASP n 2 88 ILE n 2 89 THR n 2 90 ALA n 2 91 SER n 2 92 VAL n 2 93 ASN n 2 94 CYS n 2 95 ALA n 2 96 LYS n 2 97 LYS n 2 98 ILE n 2 99 VAL n 2 100 SER n 2 101 ASP n 2 102 GLY n 2 103 ASN n 2 104 GLY n 2 105 MET n 2 106 ASN n 2 107 ALA n 2 108 TRP n 2 109 VAL n 2 110 ALA n 2 111 TRP n 2 112 ARG n 2 113 ASN n 2 114 ARG n 2 115 CYS n 2 116 LYS n 2 117 GLY n 2 118 THR n 2 119 ASP n 2 120 VAL n 2 121 GLN n 2 122 ALA n 2 123 TRP n 2 124 ILE n 2 125 ARG n 2 126 GLY n 2 127 CYS n 2 128 ARG n 2 129 LEU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene aspS _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pyrobaculum aerophilum' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 13773 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 668369 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'DH5[alpha]' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pProEx Htb' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _entity_src_nat.entity_id 2 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name chicken _entity_src_nat.pdbx_organism_scientific 'Gallus gallus' _entity_src_nat.pdbx_ncbi_taxonomy_id 9031 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain ? _entity_src_nat.tissue 'egg white' _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP LYSC_CHICK P00698 2 ;KVFGRCELAAAMKRHGLDNYRGYSLGNWVCAAKFESNFNTQATNRNTDGSTDYGILQINSRWWCNDGRTPGSRNLCNIPC SALLSSDITASVNCAKKIVSDGNGMNAWVAWRNRCKGTDVQAWIRGCRL ; 19 ? 2 PDB 4GN4 4GN4 1 ;AVYPKKTHWTAEITPNLHGSEVVVAGWVAHLGDYGRVKIVKVSDREGGAAVPVYLERGKTPDHLFKVFAELSREDVVVIK GIVEASEQYGSATGVEIFPSEIWILNKA ; 1 ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4GN4 A 1 ? 129 ? P00698 19 ? 147 ? 1 129 2 2 4GN4 B 1 ? 108 ? 4GN4 0 ? 107 ? 0 107 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4GN4 _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.30 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.49 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.0 _exptl_crystal_grow.temp 291 _exptl_crystal_grow.pdbx_details '0.2 M HEPES, 13% MPEG5000, pH 7.0, VAPOR DIFFUSION, SITTING DROP, temperature 291K' _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'MAR 2300' _diffrn_detector.pdbx_collection_date 2010-09-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.54179 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type RIGAKU _diffrn_source.pdbx_wavelength_list 1.54179 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 4GN4 _reflns.d_resolution_high 1.861 _reflns.d_resolution_low 81.82 _reflns.number_all 20797 _reflns.number_obs 20797 _reflns.pdbx_netI_over_sigmaI 29.2 _reflns.pdbx_Rsym_value 0.039 _reflns.pdbx_redundancy 6.9 _reflns.percent_possible_obs 99.1 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.861 1.960 ? 18275 ? 0.226 3.40 0.226 ? 6.5 ? 2819 94.1 1 1 1.960 2.080 ? 19721 ? 0.151 5.00 0.151 ? 6.9 ? 2858 100.0 2 1 2.080 2.220 ? 18666 ? 0.098 7.60 0.098 ? 7.0 ? 2674 100.0 3 1 2.220 2.400 ? 17771 ? 0.073 9.70 0.073 ? 7.0 ? 2523 100.0 4 1 2.400 2.630 ? 16376 ? 0.052 13.60 0.052 ? 7.1 ? 2305 100.0 5 1 2.630 2.940 ? 15000 ? 0.037 18.00 0.037 ? 7.1 ? 2110 100.0 6 1 2.940 3.390 ? 13387 ? 0.027 22.20 0.027 ? 7.1 ? 1879 100.0 7 1 3.390 4.160 ? 11373 ? 0.030 19.30 0.030 ? 7.1 ? 1605 100.0 8 1 4.160 5.880 ? 8750 ? 0.026 21.60 0.026 ? 6.9 ? 1276 100.0 9 1 5.880 34.575 ? 4073 ? 0.027 15.70 0.027 ? 5.4 ? 748 99.4 10 1 # _refine.entry_id 4GN4 _refine.ls_d_res_high 1.861 _refine.ls_d_res_low 81.82 _refine.pdbx_ls_sigma_F 0.0 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.28 _refine.ls_number_reflns_obs 20764 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1541 _refine.ls_R_factor_R_work 0.1519 _refine.ls_wR_factor_R_work 0.1484 _refine.ls_R_factor_R_free 0.1944 _refine.ls_wR_factor_R_free 0.1943 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 1064 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 33.8146 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -1.9000 _refine.aniso_B[2][2] 1.3700 _refine.aniso_B[3][3] 0.5200 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9700 _refine.correlation_coeff_Fo_to_Fc_free 0.9560 _refine.overall_SU_R_Cruickshank_DPI 0.1260 _refine.overall_SU_R_free 0.1215 _refine.pdbx_overall_ESU_R 0.1260 _refine.pdbx_overall_ESU_R_Free 0.1210 _refine.overall_SU_ML 0.0820 _refine.overall_SU_B 5.9440 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8874 _refine.B_iso_max 101.900 _refine.B_iso_min 7.270 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1835 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 30 _refine_hist.number_atoms_solvent 242 _refine_hist.number_atoms_total 2107 _refine_hist.d_res_high 1.861 _refine_hist.d_res_low 81.82 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1935 0.026 0.021 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2629 1.948 1.930 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 247 6.205 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 86 37.560 23.953 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 306 13.962 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 13 20.741 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 283 0.167 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1471 0.011 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1196 1.202 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1923 1.771 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 739 2.767 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 703 3.896 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.861 _refine_ls_shell.d_res_low 1.910 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 92.54 _refine_ls_shell.number_reflns_R_work 1341 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.1700 _refine_ls_shell.R_factor_R_free 0.2270 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 60 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1401 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4GN4 _struct.title 'OBody AM2EP06 bound to hen egg-white lysozyme' _struct.pdbx_descriptor 'OBody AM2EP06, Lysozyme C (E.C.3.2.1.17)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GN4 _struct_keywords.text ;beta barrel, OB-fold, protein-protein complex, novel scaffold, muraminidase, enzyme inhibition, engineered binding protein, inhibitor, DE NOVO PROTEIN-HYDROLASE complex ; _struct_keywords.pdbx_keywords 'DE NOVO PROTEIN/HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? I N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 TRP A 9 ? ILE A 13 ? TRP B 8 ILE B 12 5 ? 5 HELX_P HELX_P2 2 THR A 14 ? HIS A 18 ? THR B 13 HIS B 17 5 ? 5 HELX_P HELX_P3 3 PRO A 61 ? GLU A 70 ? PRO B 60 GLU B 69 1 ? 10 HELX_P HELX_P4 4 GLY B 4 ? HIS B 15 ? GLY A 4 HIS A 15 1 ? 12 HELX_P HELX_P5 5 ASN B 19 ? TYR B 23 ? ASN A 19 TYR A 23 5 ? 5 HELX_P HELX_P6 6 SER B 24 ? ASN B 37 ? SER A 24 ASN A 37 1 ? 14 HELX_P HELX_P7 7 PRO B 79 ? SER B 85 ? PRO A 79 SER A 85 5 ? 7 HELX_P HELX_P8 8 ILE B 88 ? SER B 100 ? ILE A 88 SER A 100 1 ? 13 HELX_P HELX_P9 9 ASN B 103 ? ALA B 107 ? ASN A 103 ALA A 107 5 ? 5 HELX_P HELX_P10 10 TRP B 108 ? CYS B 115 ? TRP A 108 CYS A 115 1 ? 8 HELX_P HELX_P11 11 ASP B 119 ? ARG B 125 ? ASP A 119 ARG A 125 5 ? 7 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? B CYS 6 SG ? ? ? 1_555 B CYS 127 SG ? ? A CYS 6 A CYS 127 1_555 ? ? ? ? ? ? ? 2.070 ? disulf2 disulf ? ? B CYS 30 SG ? ? ? 1_555 B CYS 115 SG ? ? A CYS 30 A CYS 115 1_555 ? ? ? ? ? ? ? 2.065 ? disulf3 disulf ? ? B CYS 64 SG ? ? ? 1_555 B CYS 80 SG ? ? A CYS 64 A CYS 80 1_555 ? ? ? ? ? ? ? 2.059 ? disulf4 disulf ? ? B CYS 76 SG ? ? ? 1_555 B CYS 94 SG ? ? A CYS 76 A CYS 94 1_555 ? ? ? ? ? ? ? 2.015 ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 21 ? ASP A 33 ? GLU B 20 ASP B 32 A 2 VAL A 37 ? SER A 43 ? VAL B 36 SER B 42 A 3 VAL A 51 ? GLU A 56 ? VAL B 50 GLU B 55 A 4 VAL A 95 ? ASN A 106 ? VAL B 94 ASN B 105 A 5 VAL A 76 ? ALA A 85 ? VAL B 75 ALA B 84 A 6 GLU A 21 ? ASP A 33 ? GLU B 20 ASP B 32 B 1 THR B 43 ? ARG B 45 ? THR A 43 ARG A 45 B 2 THR B 51 ? TYR B 53 ? THR A 51 TYR A 53 B 3 ILE B 58 ? ASN B 59 ? ILE A 58 ASN A 59 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 29 ? N ALA B 28 O LYS A 41 ? O LYS B 40 A 2 3 N LYS A 38 ? N LYS B 37 O LEU A 55 ? O LEU B 54 A 3 4 N TYR A 54 ? N TYR B 53 O ILE A 97 ? O ILE B 96 A 4 5 O TRP A 103 ? O TRP B 102 N VAL A 78 ? N VAL B 77 A 5 6 O VAL A 77 ? O VAL B 76 N GLY A 26 ? N GLY B 25 B 1 2 N ASN B 44 ? N ASN A 44 O ASP B 52 ? O ASP A 52 B 2 3 N TYR B 53 ? N TYR A 53 O ILE B 58 ? O ILE A 58 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE GOL B 201' AC2 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE GOL A 201' AC3 Software ? ? ? ? 10 'BINDING SITE FOR RESIDUE GOL A 202' AC4 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 203' AC5 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL A 204' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 5 HIS A 63 ? HIS B 62 . ? 1_555 ? 2 AC1 5 LEU A 64 ? LEU B 63 . ? 1_555 ? 3 AC1 5 SER A 100 ? SER B 99 . ? 1_555 ? 4 AC1 5 GLU A 101 ? GLU B 100 . ? 1_555 ? 5 AC1 5 ILE A 102 ? ILE B 101 . ? 1_555 ? 6 AC2 3 ARG B 5 ? ARG A 5 . ? 1_555 ? 7 AC2 3 ALA B 122 ? ALA A 122 . ? 1_555 ? 8 AC2 3 TRP B 123 ? TRP A 123 . ? 1_555 ? 9 AC3 10 LYS B 1 ? LYS A 1 . ? 1_555 ? 10 AC3 10 THR B 40 ? THR A 40 . ? 1_555 ? 11 AC3 10 GLN B 41 ? GLN A 41 . ? 1_555 ? 12 AC3 10 LEU B 84 ? LEU A 84 . ? 1_555 ? 13 AC3 10 SER B 85 ? SER A 85 . ? 1_555 ? 14 AC3 10 SER B 86 ? SER A 86 . ? 1_555 ? 15 AC3 10 GOL F . ? GOL A 203 . ? 1_555 ? 16 AC3 10 HIS A 18 ? HIS B 17 . ? 1_655 ? 17 AC3 10 GLY A 19 ? GLY B 18 . ? 1_655 ? 18 AC3 10 SER A 20 ? SER B 19 . ? 1_655 ? 19 AC4 7 GLN B 41 ? GLN A 41 . ? 1_555 ? 20 AC4 7 LEU B 84 ? LEU A 84 . ? 1_555 ? 21 AC4 7 SER B 85 ? SER A 85 . ? 1_555 ? 22 AC4 7 GOL E . ? GOL A 202 . ? 1_555 ? 23 AC4 7 HOH I . ? HOH A 420 . ? 1_555 ? 24 AC4 7 SER A 20 ? SER B 19 . ? 1_655 ? 25 AC4 7 GLU A 21 ? GLU B 20 . ? 1_655 ? 26 AC5 7 SER B 36 ? SER A 36 . ? 1_555 ? 27 AC5 7 ASN B 39 ? ASN A 39 . ? 1_555 ? 28 AC5 7 ALA B 42 ? ALA A 42 . ? 1_555 ? 29 AC5 7 ASN B 44 ? ASN A 44 . ? 1_555 ? 30 AC5 7 HOH I . ? HOH A 370 . ? 1_555 ? 31 AC5 7 HOH I . ? HOH A 387 . ? 1_555 ? 32 AC5 7 HOH H . ? HOH B 352 . ? 3_555 ? # _atom_sites.entry_id 4GN4 _atom_sites.fract_transf_matrix[1][1] 0.019829 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.017144 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012222 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 0 0 ALA ALA B . n A 1 2 VAL 2 1 1 VAL VAL B . n A 1 3 TYR 3 2 2 TYR TYR B . n A 1 4 PRO 4 3 3 PRO PRO B . n A 1 5 LYS 5 4 4 LYS LYS B . n A 1 6 LYS 6 5 5 LYS LYS B . n A 1 7 THR 7 6 6 THR THR B . n A 1 8 HIS 8 7 7 HIS HIS B . n A 1 9 TRP 9 8 8 TRP TRP B . n A 1 10 THR 10 9 9 THR THR B . n A 1 11 ALA 11 10 10 ALA ALA B . n A 1 12 GLU 12 11 11 GLU GLU B . n A 1 13 ILE 13 12 12 ILE ILE B . n A 1 14 THR 14 13 13 THR THR B . n A 1 15 PRO 15 14 14 PRO PRO B . n A 1 16 ASN 16 15 15 ASN ASN B . n A 1 17 LEU 17 16 16 LEU LEU B . n A 1 18 HIS 18 17 17 HIS HIS B . n A 1 19 GLY 19 18 18 GLY GLY B . n A 1 20 SER 20 19 19 SER SER B . n A 1 21 GLU 21 20 20 GLU GLU B . n A 1 22 VAL 22 21 21 VAL VAL B . n A 1 23 VAL 23 22 22 VAL VAL B . n A 1 24 VAL 24 23 23 VAL VAL B . n A 1 25 ALA 25 24 24 ALA ALA B . n A 1 26 GLY 26 25 25 GLY GLY B . n A 1 27 TRP 27 26 26 TRP TRP B . n A 1 28 VAL 28 27 27 VAL VAL B . n A 1 29 ALA 29 28 28 ALA ALA B . n A 1 30 HIS 30 29 29 HIS HIS B . n A 1 31 LEU 31 30 30 LEU LEU B . n A 1 32 GLY 32 31 31 GLY GLY B . n A 1 33 ASP 33 32 32 ASP ASP B . n A 1 34 TYR 34 33 33 TYR TYR B . n A 1 35 GLY 35 34 34 GLY GLY B . n A 1 36 ARG 36 35 35 ARG ARG B . n A 1 37 VAL 37 36 36 VAL VAL B . n A 1 38 LYS 38 37 37 LYS LYS B . n A 1 39 ILE 39 38 38 ILE ILE B . n A 1 40 VAL 40 39 39 VAL VAL B . n A 1 41 LYS 41 40 40 LYS LYS B . n A 1 42 VAL 42 41 41 VAL VAL B . n A 1 43 SER 43 42 42 SER SER B . n A 1 44 ASP 44 43 43 ASP ASP B . n A 1 45 ARG 45 44 44 ARG ARG B . n A 1 46 GLU 46 45 45 GLU GLU B . n A 1 47 GLY 47 46 46 GLY GLY B . n A 1 48 GLY 48 47 47 GLY GLY B . n A 1 49 ALA 49 48 48 ALA ALA B . n A 1 50 ALA 50 49 49 ALA ALA B . n A 1 51 VAL 51 50 50 VAL VAL B . n A 1 52 PRO 52 51 51 PRO PRO B . n A 1 53 VAL 53 52 52 VAL VAL B . n A 1 54 TYR 54 53 53 TYR TYR B . n A 1 55 LEU 55 54 54 LEU LEU B . n A 1 56 GLU 56 55 55 GLU GLU B . n A 1 57 ARG 57 56 56 ARG ARG B . n A 1 58 GLY 58 57 57 GLY GLY B . n A 1 59 LYS 59 58 58 LYS LYS B . n A 1 60 THR 60 59 59 THR THR B . n A 1 61 PRO 61 60 60 PRO PRO B . n A 1 62 ASP 62 61 61 ASP ASP B . n A 1 63 HIS 63 62 62 HIS HIS B . n A 1 64 LEU 64 63 63 LEU LEU B . n A 1 65 PHE 65 64 64 PHE PHE B . n A 1 66 LYS 66 65 65 LYS LYS B . n A 1 67 VAL 67 66 66 VAL VAL B . n A 1 68 PHE 68 67 67 PHE PHE B . n A 1 69 ALA 69 68 68 ALA ALA B . n A 1 70 GLU 70 69 69 GLU GLU B . n A 1 71 LEU 71 70 70 LEU LEU B . n A 1 72 SER 72 71 71 SER SER B . n A 1 73 ARG 73 72 72 ARG ARG B . n A 1 74 GLU 74 73 73 GLU GLU B . n A 1 75 ASP 75 74 74 ASP ASP B . n A 1 76 VAL 76 75 75 VAL VAL B . n A 1 77 VAL 77 76 76 VAL VAL B . n A 1 78 VAL 78 77 77 VAL VAL B . n A 1 79 ILE 79 78 78 ILE ILE B . n A 1 80 LYS 80 79 79 LYS LYS B . n A 1 81 GLY 81 80 80 GLY GLY B . n A 1 82 ILE 82 81 81 ILE ILE B . n A 1 83 VAL 83 82 82 VAL VAL B . n A 1 84 GLU 84 83 83 GLU GLU B . n A 1 85 ALA 85 84 84 ALA ALA B . n A 1 86 SER 86 85 85 SER SER B . n A 1 87 GLU 87 86 86 GLU GLU B . n A 1 88 GLN 88 87 87 GLN GLN B . n A 1 89 TYR 89 88 88 TYR TYR B . n A 1 90 GLY 90 89 89 GLY GLY B . n A 1 91 SER 91 90 90 SER SER B . n A 1 92 ALA 92 91 91 ALA ALA B . n A 1 93 THR 93 92 92 THR THR B . n A 1 94 GLY 94 93 93 GLY GLY B . n A 1 95 VAL 95 94 94 VAL VAL B . n A 1 96 GLU 96 95 95 GLU GLU B . n A 1 97 ILE 97 96 96 ILE ILE B . n A 1 98 PHE 98 97 97 PHE PHE B . n A 1 99 PRO 99 98 98 PRO PRO B . n A 1 100 SER 100 99 99 SER SER B . n A 1 101 GLU 101 100 100 GLU GLU B . n A 1 102 ILE 102 101 101 ILE ILE B . n A 1 103 TRP 103 102 102 TRP TRP B . n A 1 104 ILE 104 103 103 ILE ILE B . n A 1 105 LEU 105 104 104 LEU LEU B . n A 1 106 ASN 106 105 105 ASN ASN B . n A 1 107 LYS 107 106 106 LYS LYS B . n A 1 108 ALA 108 107 107 ALA ALA B . n B 2 1 LYS 1 1 1 LYS LYS A . n B 2 2 VAL 2 2 2 VAL VAL A . n B 2 3 PHE 3 3 3 PHE PHE A . n B 2 4 GLY 4 4 4 GLY GLY A . n B 2 5 ARG 5 5 5 ARG ARG A . n B 2 6 CYS 6 6 6 CYS CYS A . n B 2 7 GLU 7 7 7 GLU GLU A . n B 2 8 LEU 8 8 8 LEU LEU A . n B 2 9 ALA 9 9 9 ALA ALA A . n B 2 10 ALA 10 10 10 ALA ALA A . n B 2 11 ALA 11 11 11 ALA ALA A . n B 2 12 MET 12 12 12 MET MET A . n B 2 13 LYS 13 13 13 LYS LYS A . n B 2 14 ARG 14 14 14 ARG ARG A . n B 2 15 HIS 15 15 15 HIS HIS A . n B 2 16 GLY 16 16 16 GLY GLY A . n B 2 17 LEU 17 17 17 LEU LEU A . n B 2 18 ASP 18 18 18 ASP ASP A . n B 2 19 ASN 19 19 19 ASN ASN A . n B 2 20 TYR 20 20 20 TYR TYR A . n B 2 21 ARG 21 21 21 ARG ARG A . n B 2 22 GLY 22 22 22 GLY GLY A . n B 2 23 TYR 23 23 23 TYR TYR A . n B 2 24 SER 24 24 24 SER SER A . n B 2 25 LEU 25 25 25 LEU LEU A . n B 2 26 GLY 26 26 26 GLY GLY A . n B 2 27 ASN 27 27 27 ASN ASN A . n B 2 28 TRP 28 28 28 TRP TRP A . n B 2 29 VAL 29 29 29 VAL VAL A . n B 2 30 CYS 30 30 30 CYS CYS A . n B 2 31 ALA 31 31 31 ALA ALA A . n B 2 32 ALA 32 32 32 ALA ALA A . n B 2 33 LYS 33 33 33 LYS LYS A . n B 2 34 PHE 34 34 34 PHE PHE A . n B 2 35 GLU 35 35 35 GLU GLU A . n B 2 36 SER 36 36 36 SER SER A . n B 2 37 ASN 37 37 37 ASN ASN A . n B 2 38 PHE 38 38 38 PHE PHE A . n B 2 39 ASN 39 39 39 ASN ASN A . n B 2 40 THR 40 40 40 THR THR A . n B 2 41 GLN 41 41 41 GLN GLN A . n B 2 42 ALA 42 42 42 ALA ALA A . n B 2 43 THR 43 43 43 THR THR A . n B 2 44 ASN 44 44 44 ASN ASN A . n B 2 45 ARG 45 45 45 ARG ARG A . n B 2 46 ASN 46 46 46 ASN ASN A . n B 2 47 THR 47 47 47 THR THR A . n B 2 48 ASP 48 48 48 ASP ASP A . n B 2 49 GLY 49 49 49 GLY GLY A . n B 2 50 SER 50 50 50 SER SER A . n B 2 51 THR 51 51 51 THR THR A . n B 2 52 ASP 52 52 52 ASP ASP A . n B 2 53 TYR 53 53 53 TYR TYR A . n B 2 54 GLY 54 54 54 GLY GLY A . n B 2 55 ILE 55 55 55 ILE ILE A . n B 2 56 LEU 56 56 56 LEU LEU A . n B 2 57 GLN 57 57 57 GLN GLN A . n B 2 58 ILE 58 58 58 ILE ILE A . n B 2 59 ASN 59 59 59 ASN ASN A . n B 2 60 SER 60 60 60 SER SER A . n B 2 61 ARG 61 61 61 ARG ARG A . n B 2 62 TRP 62 62 62 TRP TRP A . n B 2 63 TRP 63 63 63 TRP TRP A . n B 2 64 CYS 64 64 64 CYS CYS A . n B 2 65 ASN 65 65 65 ASN ASN A . n B 2 66 ASP 66 66 66 ASP ASP A . n B 2 67 GLY 67 67 67 GLY GLY A . n B 2 68 ARG 68 68 68 ARG ARG A . n B 2 69 THR 69 69 69 THR THR A . n B 2 70 PRO 70 70 70 PRO PRO A . n B 2 71 GLY 71 71 71 GLY GLY A . n B 2 72 SER 72 72 72 SER SER A . n B 2 73 ARG 73 73 73 ARG ARG A . n B 2 74 ASN 74 74 74 ASN ASN A . n B 2 75 LEU 75 75 75 LEU LEU A . n B 2 76 CYS 76 76 76 CYS CYS A . n B 2 77 ASN 77 77 77 ASN ASN A . n B 2 78 ILE 78 78 78 ILE ILE A . n B 2 79 PRO 79 79 79 PRO PRO A . n B 2 80 CYS 80 80 80 CYS CYS A . n B 2 81 SER 81 81 81 SER SER A . n B 2 82 ALA 82 82 82 ALA ALA A . n B 2 83 LEU 83 83 83 LEU LEU A . n B 2 84 LEU 84 84 84 LEU LEU A . n B 2 85 SER 85 85 85 SER SER A . n B 2 86 SER 86 86 86 SER SER A . n B 2 87 ASP 87 87 87 ASP ASP A . n B 2 88 ILE 88 88 88 ILE ILE A . n B 2 89 THR 89 89 89 THR THR A . n B 2 90 ALA 90 90 90 ALA ALA A . n B 2 91 SER 91 91 91 SER SER A . n B 2 92 VAL 92 92 92 VAL VAL A . n B 2 93 ASN 93 93 93 ASN ASN A . n B 2 94 CYS 94 94 94 CYS CYS A . n B 2 95 ALA 95 95 95 ALA ALA A . n B 2 96 LYS 96 96 96 LYS LYS A . n B 2 97 LYS 97 97 97 LYS LYS A . n B 2 98 ILE 98 98 98 ILE ILE A . n B 2 99 VAL 99 99 99 VAL VAL A . n B 2 100 SER 100 100 100 SER SER A . n B 2 101 ASP 101 101 101 ASP ASP A . n B 2 102 GLY 102 102 102 GLY GLY A . n B 2 103 ASN 103 103 103 ASN ASN A . n B 2 104 GLY 104 104 104 GLY GLY A . n B 2 105 MET 105 105 105 MET MET A . n B 2 106 ASN 106 106 106 ASN ASN A . n B 2 107 ALA 107 107 107 ALA ALA A . n B 2 108 TRP 108 108 108 TRP TRP A . n B 2 109 VAL 109 109 109 VAL VAL A . n B 2 110 ALA 110 110 110 ALA ALA A . n B 2 111 TRP 111 111 111 TRP TRP A . n B 2 112 ARG 112 112 112 ARG ARG A . n B 2 113 ASN 113 113 113 ASN ASN A . n B 2 114 ARG 114 114 114 ARG ARG A . n B 2 115 CYS 115 115 115 CYS CYS A . n B 2 116 LYS 116 116 116 LYS LYS A . n B 2 117 GLY 117 117 117 GLY GLY A . n B 2 118 THR 118 118 118 THR THR A . n B 2 119 ASP 119 119 119 ASP ASP A . n B 2 120 VAL 120 120 120 VAL VAL A . n B 2 121 GLN 121 121 121 GLN GLN A . n B 2 122 ALA 122 122 122 ALA ALA A . n B 2 123 TRP 123 123 123 TRP TRP A . n B 2 124 ILE 124 124 124 ILE ILE A . n B 2 125 ARG 125 125 125 ARG ARG A . n B 2 126 GLY 126 126 126 GLY GLY A . n B 2 127 CYS 127 127 127 CYS CYS A . n B 2 128 ARG 128 128 128 ARG ARG A . n B 2 129 LEU 129 129 129 LEU LEU A . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-08-21 2 'Structure model' 1 1 2014-02-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.861 _diffrn_reflns.pdbx_d_res_low 81.820 _diffrn_reflns.pdbx_number_obs 20797 _diffrn_reflns.pdbx_Rmerge_I_obs ? _diffrn_reflns.pdbx_Rsym_value 0.039 _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI 11.90 _diffrn_reflns.pdbx_redundancy 6.90 _diffrn_reflns.pdbx_percent_possible_obs 99.10 _diffrn_reflns.number 143392 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 5.88 34.58 ? ? 0.027 0.027 ? 5.40 99.40 1 4.16 5.88 ? ? 0.026 0.026 ? 6.90 100.00 1 3.39 4.16 ? ? 0.030 0.030 ? 7.10 100.00 1 2.94 3.39 ? ? 0.027 0.027 ? 7.10 100.00 1 2.63 2.94 ? ? 0.037 0.037 ? 7.10 100.00 1 2.40 2.63 ? ? 0.052 0.052 ? 7.10 100.00 1 2.22 2.40 ? ? 0.073 0.073 ? 7.00 100.00 1 2.08 2.22 ? ? 0.098 0.098 ? 7.00 100.00 1 1.96 2.08 ? ? 0.151 0.151 ? 6.90 100.00 1 1.86 1.96 ? ? 0.226 0.226 ? 6.50 94.10 # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 21.9934 9.4077 5.1161 0.1383 0.1452 0.0853 0.0958 0.0225 -0.0622 6.6455 7.8197 3.5956 3.6499 -1.1702 -1.7252 -0.0514 -0.0945 0.1460 0.2217 -0.4899 -0.3839 -0.2052 0.4609 0.4488 'X-RAY DIFFRACTION' 2 ? refined 16.4049 16.1944 14.7885 0.0249 0.0568 0.0406 0.0239 -0.0150 -0.0390 4.2687 1.8631 5.3691 -0.0981 -0.5325 0.2608 -0.0901 0.1156 -0.0255 -0.2018 0.1518 -0.0372 0.0285 -0.1272 0.3353 'X-RAY DIFFRACTION' 3 ? refined 17.2891 10.8982 29.2104 0.1549 0.5541 0.0615 0.1296 -0.0043 0.0144 4.9652 9.3398 4.6972 1.9170 2.0336 1.2289 -0.0904 0.1169 -0.0265 -1.3268 -0.0390 -0.1138 0.6623 0.2691 0.5362 'X-RAY DIFFRACTION' 4 ? refined 16.4145 9.8654 16.5327 0.1000 0.0783 0.0520 0.0606 0.0213 0.0077 6.0206 1.7070 2.7639 -0.4103 -0.3664 0.0305 -0.1556 0.0215 0.1341 -0.3888 -0.2802 -0.0532 0.0546 0.2611 0.3704 'X-RAY DIFFRACTION' 5 ? refined 11.8063 14.2240 -0.2005 0.1606 0.1234 0.0487 -0.0206 -0.0250 -0.0616 17.2371 1.5646 15.2674 -2.2471 -11.5533 0.2289 -0.1810 -0.0881 0.2691 1.2262 -0.3576 0.0097 -0.3859 0.2788 -0.6537 'X-RAY DIFFRACTION' 6 ? refined -12.6661 8.6605 23.2513 0.0796 0.0662 0.1184 0.0406 0.0468 0.0469 5.9512 3.4122 4.4570 -0.5986 2.4330 -1.2513 -0.0550 0.1366 -0.0817 -0.3577 0.1051 0.3719 0.1638 -0.1091 -0.4437 'X-RAY DIFFRACTION' 7 ? refined -0.5584 9.1252 22.7477 0.0877 0.0919 0.0695 0.0540 0.0175 0.0097 6.3760 4.0138 1.3045 4.6361 -0.2041 -0.9263 -0.0135 0.1005 -0.0870 -0.0686 0.1854 0.2105 0.0736 -0.0354 0.0369 'X-RAY DIFFRACTION' 8 ? refined -2.1784 14.3521 30.3624 0.1917 0.1635 0.0739 0.0468 0.0229 -0.0630 7.5895 5.5233 4.4564 1.1536 -0.3588 -2.9478 0.2124 -0.2620 0.0496 -0.6797 0.5107 -0.1088 0.4739 -0.3905 0.3135 'X-RAY DIFFRACTION' 9 ? refined -5.3440 11.3755 16.9322 0.1375 0.0815 0.1669 0.0063 0.0033 0.0422 6.6460 3.7690 3.0681 -0.6534 0.1082 -0.3670 0.0938 0.1121 -0.2059 0.4960 -0.0302 -0.1896 -0.4774 0.0101 0.0706 'X-RAY DIFFRACTION' 10 ? refined -7.8518 9.2777 36.9869 0.3594 0.3847 0.1161 0.0258 0.0826 -0.0066 28.3683 28.2776 18.0545 -2.8378 1.0991 5.6440 0.9060 -0.5192 -0.3867 -1.1694 -0.9492 0.7518 2.3950 0.2526 0.4704 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 A 1 A 20 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 A 21 A 60 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 A 61 A 77 ? . . . . ? 'X-RAY DIFFRACTION' 4 4 A 78 A 113 ? . . . . ? 'X-RAY DIFFRACTION' 5 5 A 114 A 128 ? . . . . ? 'X-RAY DIFFRACTION' 6 6 B 0 B 30 ? . . . . ? 'X-RAY DIFFRACTION' 7 7 B 31 B 56 ? . . . . ? 'X-RAY DIFFRACTION' 8 8 B 57 B 79 ? . . . . ? 'X-RAY DIFFRACTION' 9 9 B 80 B 101 ? . . . . ? 'X-RAY DIFFRACTION' 10 10 B 102 B 107 ? . . . . ? # _pdbx_phasing_MR.entry_id 4GN4 _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor 30.540 _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 34.580 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 34.580 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 SCALA 3.3.16 2010/01/06 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 3 PHASER 2.1.4 'Wed Jun 24 14:00:05 2009' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 388 ? ? O A HOH 392 ? ? 2.11 2 1 O A HOH 322 ? ? O A HOH 426 ? ? 2.15 # loop_ _pdbx_validate_symm_contact.id _pdbx_validate_symm_contact.PDB_model_num _pdbx_validate_symm_contact.auth_atom_id_1 _pdbx_validate_symm_contact.auth_asym_id_1 _pdbx_validate_symm_contact.auth_comp_id_1 _pdbx_validate_symm_contact.auth_seq_id_1 _pdbx_validate_symm_contact.PDB_ins_code_1 _pdbx_validate_symm_contact.label_alt_id_1 _pdbx_validate_symm_contact.site_symmetry_1 _pdbx_validate_symm_contact.auth_atom_id_2 _pdbx_validate_symm_contact.auth_asym_id_2 _pdbx_validate_symm_contact.auth_comp_id_2 _pdbx_validate_symm_contact.auth_seq_id_2 _pdbx_validate_symm_contact.PDB_ins_code_2 _pdbx_validate_symm_contact.label_alt_id_2 _pdbx_validate_symm_contact.site_symmetry_2 _pdbx_validate_symm_contact.dist 1 1 O B HOH 325 ? ? 1_555 O A HOH 347 ? ? 3_545 2.00 2 1 O B HOH 364 ? ? 1_555 O A HOH 380 ? ? 3_545 2.16 # loop_ _pdbx_validate_rmsd_bond.id _pdbx_validate_rmsd_bond.PDB_model_num _pdbx_validate_rmsd_bond.auth_atom_id_1 _pdbx_validate_rmsd_bond.auth_asym_id_1 _pdbx_validate_rmsd_bond.auth_comp_id_1 _pdbx_validate_rmsd_bond.auth_seq_id_1 _pdbx_validate_rmsd_bond.PDB_ins_code_1 _pdbx_validate_rmsd_bond.label_alt_id_1 _pdbx_validate_rmsd_bond.auth_atom_id_2 _pdbx_validate_rmsd_bond.auth_asym_id_2 _pdbx_validate_rmsd_bond.auth_comp_id_2 _pdbx_validate_rmsd_bond.auth_seq_id_2 _pdbx_validate_rmsd_bond.PDB_ins_code_2 _pdbx_validate_rmsd_bond.label_alt_id_2 _pdbx_validate_rmsd_bond.bond_value _pdbx_validate_rmsd_bond.bond_target_value _pdbx_validate_rmsd_bond.bond_deviation _pdbx_validate_rmsd_bond.bond_standard_deviation _pdbx_validate_rmsd_bond.linker_flag 1 1 CG B TYR 2 ? ? CD2 B TYR 2 ? ? 1.960 1.387 0.573 0.013 N 2 1 CG B TYR 2 ? ? CD1 B TYR 2 ? ? 1.043 1.387 -0.344 0.013 N 3 1 CB B VAL 50 ? ? CG2 B VAL 50 ? ? 1.653 1.524 0.129 0.021 N 4 1 CD1 B TYR 53 ? ? CE1 B TYR 53 ? ? 1.506 1.389 0.117 0.015 N 5 1 CE2 B TYR 53 ? ? CD2 B TYR 53 ? ? 1.479 1.389 0.090 0.015 N 6 1 NE B ARG 72 ? ? CZ B ARG 72 ? ? 1.189 1.326 -0.137 0.013 N 7 1 CG A ARG 45 ? ? CD A ARG 45 ? ? 1.719 1.515 0.204 0.025 N 8 1 NE A ARG 128 ? ? CZ A ARG 128 ? ? 1.453 1.326 0.127 0.013 N # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 CB B TYR 2 ? ? CG B TYR 2 ? ? CD2 B TYR 2 ? ? 91.93 121.00 -29.07 0.60 N 2 1 CD1 B TYR 2 ? ? CG B TYR 2 ? ? CD2 B TYR 2 ? ? 99.53 117.90 -18.37 1.10 N 3 1 CB B TYR 2 ? ? CG B TYR 2 ? ? CD1 B TYR 2 ? ? 150.13 121.00 29.13 0.60 N 4 1 CG B TYR 2 ? ? CD1 B TYR 2 ? ? CE1 B TYR 2 ? ? 140.36 121.30 19.06 0.80 N 5 1 CG B TYR 2 ? ? CD2 B TYR 2 ? ? CE2 B TYR 2 ? ? 115.47 121.30 -5.83 0.80 N 6 1 CD B ARG 72 ? ? NE B ARG 72 ? ? CZ B ARG 72 ? ? 136.31 123.60 12.71 1.40 N 7 1 NE B ARG 72 ? ? CZ B ARG 72 ? ? NH1 B ARG 72 ? ? 127.45 120.30 7.15 0.50 N 8 1 NE B ARG 72 ? ? CZ B ARG 72 ? ? NH2 B ARG 72 ? ? 112.63 120.30 -7.67 0.50 N 9 1 NE A ARG 73 ? ? CZ A ARG 73 ? ? NH1 A ARG 73 ? ? 125.07 120.30 4.77 0.50 N 10 1 NE A ARG 73 ? ? CZ A ARG 73 ? ? NH2 A ARG 73 ? ? 115.03 120.30 -5.27 0.50 N 11 1 CG A ARG 128 ? ? CD A ARG 128 ? ? NE A ARG 128 ? ? 88.98 111.80 -22.82 2.10 N 12 1 NE A ARG 128 ? ? CZ A ARG 128 ? ? NH1 A ARG 128 ? ? 84.61 120.30 -35.69 0.50 N 13 1 NE A ARG 128 ? ? CZ A ARG 128 ? ? NH2 A ARG 128 ? ? 125.75 120.30 5.45 0.50 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 VAL B 1 ? ? 55.96 110.05 2 1 LYS B 58 ? ? -130.62 -53.72 3 1 GLU B 73 ? ? 70.41 -3.80 4 1 CYS A 115 ? ? -122.57 -50.00 5 1 ASP A 119 ? ? -69.92 79.02 # loop_ _pdbx_validate_planes.id _pdbx_validate_planes.PDB_model_num _pdbx_validate_planes.auth_comp_id _pdbx_validate_planes.auth_asym_id _pdbx_validate_planes.auth_seq_id _pdbx_validate_planes.PDB_ins_code _pdbx_validate_planes.label_alt_id _pdbx_validate_planes.rmsd _pdbx_validate_planes.type 1 1 TYR B 2 ? ? 0.083 'SIDE CHAIN' 2 1 ARG A 128 ? ? 0.165 'SIDE CHAIN' # loop_ _pdbx_unobs_or_zero_occ_atoms.id _pdbx_unobs_or_zero_occ_atoms.PDB_model_num _pdbx_unobs_or_zero_occ_atoms.polymer_flag _pdbx_unobs_or_zero_occ_atoms.occupancy_flag _pdbx_unobs_or_zero_occ_atoms.auth_asym_id _pdbx_unobs_or_zero_occ_atoms.auth_comp_id _pdbx_unobs_or_zero_occ_atoms.auth_seq_id _pdbx_unobs_or_zero_occ_atoms.PDB_ins_code _pdbx_unobs_or_zero_occ_atoms.auth_atom_id _pdbx_unobs_or_zero_occ_atoms.label_alt_id _pdbx_unobs_or_zero_occ_atoms.label_asym_id _pdbx_unobs_or_zero_occ_atoms.label_comp_id _pdbx_unobs_or_zero_occ_atoms.label_seq_id _pdbx_unobs_or_zero_occ_atoms.label_atom_id 1 1 Y 0 B TYR 2 ? CD1 ? A TYR 3 CD1 2 1 Y 0 B TYR 2 ? CD2 ? A TYR 3 CD2 3 1 Y 0 B TYR 2 ? CE1 ? A TYR 3 CE1 4 1 Y 0 B TYR 2 ? CE2 ? A TYR 3 CE2 5 1 Y 0 B TYR 2 ? CZ ? A TYR 3 CZ 6 1 Y 0 B TYR 2 ? OH ? A TYR 3 OH 7 1 Y 1 B LYS 4 ? CG ? A LYS 5 CG 8 1 Y 1 B LYS 4 ? CD ? A LYS 5 CD 9 1 Y 1 B LYS 4 ? CE ? A LYS 5 CE 10 1 Y 1 B LYS 4 ? NZ ? A LYS 5 NZ 11 1 Y 0 B LYS 65 ? NZ ? A LYS 66 NZ 12 1 Y 0 B ARG 72 ? CZ ? A ARG 73 CZ 13 1 Y 0 B ARG 72 ? NH1 ? A ARG 73 NH1 14 1 Y 0 B ARG 72 ? NH2 ? A ARG 73 NH2 15 1 Y 0 B LYS 106 ? CE ? A LYS 107 CE 16 1 Y 0 B LYS 106 ? NZ ? A LYS 107 NZ 17 1 Y 0 A ARG 45 ? CD ? B ARG 45 CD 18 1 Y 0 A ARG 45 ? NE ? B ARG 45 NE 19 1 Y 0 A ARG 45 ? CZ ? B ARG 45 CZ 20 1 Y 0 A ARG 45 ? NH1 ? B ARG 45 NH1 21 1 Y 0 A ARG 45 ? NH2 ? B ARG 45 NH2 22 1 Y 0 A ARG 128 ? CD ? B ARG 128 CD 23 1 Y 0 A ARG 128 ? NE ? B ARG 128 NE # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 3 GLYCEROL GOL 4 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 3 GOL 1 201 1 GOL GOL B . D 3 GOL 1 201 1 GOL GOL A . E 3 GOL 1 202 1 GOL GOL A . F 3 GOL 1 203 1 GOL GOL A . G 3 GOL 1 204 1 GOL GOL A . H 4 HOH 1 301 6 HOH HOH B . H 4 HOH 2 302 7 HOH HOH B . H 4 HOH 3 303 8 HOH HOH B . H 4 HOH 4 304 9 HOH HOH B . H 4 HOH 5 305 12 HOH HOH B . H 4 HOH 6 306 13 HOH HOH B . H 4 HOH 7 307 16 HOH HOH B . H 4 HOH 8 308 19 HOH HOH B . H 4 HOH 9 309 24 HOH HOH B . H 4 HOH 10 310 25 HOH HOH B . H 4 HOH 11 311 26 HOH HOH B . H 4 HOH 12 312 27 HOH HOH B . H 4 HOH 13 313 33 HOH HOH B . H 4 HOH 14 314 41 HOH HOH B . H 4 HOH 15 315 42 HOH HOH B . H 4 HOH 16 316 43 HOH HOH B . H 4 HOH 17 317 44 HOH HOH B . H 4 HOH 18 318 48 HOH HOH B . H 4 HOH 19 319 49 HOH HOH B . H 4 HOH 20 320 50 HOH HOH B . H 4 HOH 21 321 51 HOH HOH B . H 4 HOH 22 322 52 HOH HOH B . H 4 HOH 23 323 56 HOH HOH B . H 4 HOH 24 324 57 HOH HOH B . H 4 HOH 25 325 59 HOH HOH B . H 4 HOH 26 326 61 HOH HOH B . H 4 HOH 27 327 62 HOH HOH B . H 4 HOH 28 328 63 HOH HOH B . H 4 HOH 29 329 64 HOH HOH B . H 4 HOH 30 330 65 HOH HOH B . H 4 HOH 31 331 66 HOH HOH B . H 4 HOH 32 332 69 HOH HOH B . H 4 HOH 33 333 72 HOH HOH B . H 4 HOH 34 334 74 HOH HOH B . H 4 HOH 35 335 79 HOH HOH B . H 4 HOH 36 336 81 HOH HOH B . H 4 HOH 37 337 82 HOH HOH B . H 4 HOH 38 338 86 HOH HOH B . H 4 HOH 39 339 90 HOH HOH B . H 4 HOH 40 340 93 HOH HOH B . H 4 HOH 41 341 96 HOH HOH B . H 4 HOH 42 342 97 HOH HOH B . H 4 HOH 43 343 99 HOH HOH B . H 4 HOH 44 344 101 HOH HOH B . H 4 HOH 45 345 102 HOH HOH B . H 4 HOH 46 346 103 HOH HOH B . H 4 HOH 47 347 104 HOH HOH B . H 4 HOH 48 348 108 HOH HOH B . H 4 HOH 49 349 109 HOH HOH B . H 4 HOH 50 350 112 HOH HOH B . H 4 HOH 51 351 117 HOH HOH B . H 4 HOH 52 352 118 HOH HOH B . H 4 HOH 53 353 122 HOH HOH B . H 4 HOH 54 354 126 HOH HOH B . H 4 HOH 55 355 127 HOH HOH B . H 4 HOH 56 356 129 HOH HOH B . H 4 HOH 57 357 130 HOH HOH B . H 4 HOH 58 358 131 HOH HOH B . H 4 HOH 59 359 132 HOH HOH B . H 4 HOH 60 360 135 HOH HOH B . H 4 HOH 61 361 137 HOH HOH B . H 4 HOH 62 362 140 HOH HOH B . H 4 HOH 63 363 143 HOH HOH B . H 4 HOH 64 364 144 HOH HOH B . H 4 HOH 65 365 146 HOH HOH B . H 4 HOH 66 366 147 HOH HOH B . H 4 HOH 67 367 148 HOH HOH B . H 4 HOH 68 368 151 HOH HOH B . H 4 HOH 69 369 154 HOH HOH B . H 4 HOH 70 370 155 HOH HOH B . H 4 HOH 71 371 156 HOH HOH B . H 4 HOH 72 372 159 HOH HOH B . H 4 HOH 73 373 166 HOH HOH B . H 4 HOH 74 374 169 HOH HOH B . H 4 HOH 75 375 170 HOH HOH B . H 4 HOH 76 376 171 HOH HOH B . H 4 HOH 77 377 172 HOH HOH B . H 4 HOH 78 378 179 HOH HOH B . H 4 HOH 79 379 182 HOH HOH B . H 4 HOH 80 380 186 HOH HOH B . H 4 HOH 81 381 187 HOH HOH B . H 4 HOH 82 382 189 HOH HOH B . H 4 HOH 83 383 191 HOH HOH B . H 4 HOH 84 384 192 HOH HOH B . H 4 HOH 85 385 193 HOH HOH B . H 4 HOH 86 386 205 HOH HOH B . H 4 HOH 87 387 207 HOH HOH B . H 4 HOH 88 388 210 HOH HOH B . H 4 HOH 89 389 211 HOH HOH B . H 4 HOH 90 390 212 HOH HOH B . H 4 HOH 91 391 227 HOH HOH B . H 4 HOH 92 392 1 HOH HOH B . H 4 HOH 93 393 4 HOH HOH B . H 4 HOH 94 394 6 HOH HOH B . H 4 HOH 95 395 8 HOH HOH B . H 4 HOH 96 396 11 HOH HOH B . H 4 HOH 97 397 12 HOH HOH B . H 4 HOH 98 398 13 HOH HOH B . I 4 HOH 1 301 138 HOH HOH A . I 4 HOH 2 302 1 HOH HOH A . I 4 HOH 3 303 2 HOH HOH A . I 4 HOH 4 304 3 HOH HOH A . I 4 HOH 5 305 4 HOH HOH A . I 4 HOH 6 306 5 HOH HOH A . I 4 HOH 7 307 10 HOH HOH A . I 4 HOH 8 308 11 HOH HOH A . I 4 HOH 9 309 14 HOH HOH A . I 4 HOH 10 310 15 HOH HOH A . I 4 HOH 11 311 17 HOH HOH A . I 4 HOH 12 312 18 HOH HOH A . I 4 HOH 13 313 20 HOH HOH A . I 4 HOH 14 314 21 HOH HOH A . I 4 HOH 15 315 22 HOH HOH A . I 4 HOH 16 316 23 HOH HOH A . I 4 HOH 17 317 28 HOH HOH A . I 4 HOH 18 318 29 HOH HOH A . I 4 HOH 19 319 30 HOH HOH A . I 4 HOH 20 320 31 HOH HOH A . I 4 HOH 21 321 32 HOH HOH A . I 4 HOH 22 322 34 HOH HOH A . I 4 HOH 23 323 35 HOH HOH A . I 4 HOH 24 324 36 HOH HOH A . I 4 HOH 25 325 37 HOH HOH A . I 4 HOH 26 326 38 HOH HOH A . I 4 HOH 27 327 39 HOH HOH A . I 4 HOH 28 328 40 HOH HOH A . I 4 HOH 29 329 45 HOH HOH A . I 4 HOH 30 330 46 HOH HOH A . I 4 HOH 31 331 47 HOH HOH A . I 4 HOH 32 332 53 HOH HOH A . I 4 HOH 33 333 54 HOH HOH A . I 4 HOH 34 334 55 HOH HOH A . I 4 HOH 35 335 58 HOH HOH A . I 4 HOH 36 336 60 HOH HOH A . I 4 HOH 37 337 67 HOH HOH A . I 4 HOH 38 338 68 HOH HOH A . I 4 HOH 39 339 70 HOH HOH A . I 4 HOH 40 340 71 HOH HOH A . I 4 HOH 41 341 73 HOH HOH A . I 4 HOH 42 342 75 HOH HOH A . I 4 HOH 43 343 76 HOH HOH A . I 4 HOH 44 344 77 HOH HOH A . I 4 HOH 45 345 78 HOH HOH A . I 4 HOH 46 346 83 HOH HOH A . I 4 HOH 47 347 84 HOH HOH A . I 4 HOH 48 348 85 HOH HOH A . I 4 HOH 49 349 87 HOH HOH A . I 4 HOH 50 350 88 HOH HOH A . I 4 HOH 51 351 89 HOH HOH A . I 4 HOH 52 352 91 HOH HOH A . I 4 HOH 53 353 92 HOH HOH A . I 4 HOH 54 354 94 HOH HOH A . I 4 HOH 55 355 95 HOH HOH A . I 4 HOH 56 356 98 HOH HOH A . I 4 HOH 57 357 100 HOH HOH A . I 4 HOH 58 358 105 HOH HOH A . I 4 HOH 59 359 106 HOH HOH A . I 4 HOH 60 360 107 HOH HOH A . I 4 HOH 61 361 110 HOH HOH A . I 4 HOH 62 362 111 HOH HOH A . I 4 HOH 63 363 113 HOH HOH A . I 4 HOH 64 364 114 HOH HOH A . I 4 HOH 65 365 115 HOH HOH A . I 4 HOH 66 366 116 HOH HOH A . I 4 HOH 67 367 119 HOH HOH A . I 4 HOH 68 368 120 HOH HOH A . I 4 HOH 69 369 121 HOH HOH A . I 4 HOH 70 370 123 HOH HOH A . I 4 HOH 71 371 124 HOH HOH A . I 4 HOH 72 372 125 HOH HOH A . I 4 HOH 73 373 128 HOH HOH A . I 4 HOH 74 374 133 HOH HOH A . I 4 HOH 75 375 134 HOH HOH A . I 4 HOH 76 376 136 HOH HOH A . I 4 HOH 77 377 139 HOH HOH A . I 4 HOH 78 378 141 HOH HOH A . I 4 HOH 79 379 142 HOH HOH A . I 4 HOH 80 380 145 HOH HOH A . I 4 HOH 81 381 149 HOH HOH A . I 4 HOH 82 382 150 HOH HOH A . I 4 HOH 83 383 152 HOH HOH A . I 4 HOH 84 384 153 HOH HOH A . I 4 HOH 85 385 157 HOH HOH A . I 4 HOH 86 386 158 HOH HOH A . I 4 HOH 87 387 160 HOH HOH A . I 4 HOH 88 388 161 HOH HOH A . I 4 HOH 89 389 162 HOH HOH A . I 4 HOH 90 390 163 HOH HOH A . I 4 HOH 91 391 164 HOH HOH A . I 4 HOH 92 392 165 HOH HOH A . I 4 HOH 93 393 167 HOH HOH A . I 4 HOH 94 394 173 HOH HOH A . I 4 HOH 95 395 174 HOH HOH A . I 4 HOH 96 396 175 HOH HOH A . I 4 HOH 97 397 176 HOH HOH A . I 4 HOH 98 398 177 HOH HOH A . I 4 HOH 99 399 178 HOH HOH A . I 4 HOH 100 400 180 HOH HOH A . I 4 HOH 101 401 181 HOH HOH A . I 4 HOH 102 402 183 HOH HOH A . I 4 HOH 103 403 184 HOH HOH A . I 4 HOH 104 404 185 HOH HOH A . I 4 HOH 105 405 188 HOH HOH A . I 4 HOH 106 406 190 HOH HOH A . I 4 HOH 107 407 194 HOH HOH A . I 4 HOH 108 408 195 HOH HOH A . I 4 HOH 109 409 196 HOH HOH A . I 4 HOH 110 410 197 HOH HOH A . I 4 HOH 111 411 198 HOH HOH A . I 4 HOH 112 412 199 HOH HOH A . I 4 HOH 113 413 201 HOH HOH A . I 4 HOH 114 414 202 HOH HOH A . I 4 HOH 115 415 203 HOH HOH A . I 4 HOH 116 416 204 HOH HOH A . I 4 HOH 117 417 206 HOH HOH A . I 4 HOH 118 418 208 HOH HOH A . I 4 HOH 119 419 209 HOH HOH A . I 4 HOH 120 420 213 HOH HOH A . I 4 HOH 121 421 215 HOH HOH A . I 4 HOH 122 422 216 HOH HOH A . I 4 HOH 123 423 217 HOH HOH A . I 4 HOH 124 424 218 HOH HOH A . I 4 HOH 125 425 219 HOH HOH A . I 4 HOH 126 426 220 HOH HOH A . I 4 HOH 127 427 221 HOH HOH A . I 4 HOH 128 428 222 HOH HOH A . I 4 HOH 129 429 223 HOH HOH A . I 4 HOH 130 430 224 HOH HOH A . I 4 HOH 131 431 225 HOH HOH A . I 4 HOH 132 432 226 HOH HOH A . I 4 HOH 133 433 228 HOH HOH A . I 4 HOH 134 434 229 HOH HOH A . I 4 HOH 135 435 230 HOH HOH A . I 4 HOH 136 436 231 HOH HOH A . I 4 HOH 137 437 232 HOH HOH A . I 4 HOH 138 438 233 HOH HOH A . I 4 HOH 139 439 2 HOH HOH A . I 4 HOH 140 440 3 HOH HOH A . I 4 HOH 141 441 5 HOH HOH A . I 4 HOH 142 442 7 HOH HOH A . I 4 HOH 143 443 9 HOH HOH A . I 4 HOH 144 444 10 HOH HOH A . #