HEADER HYDROLASE 17-AUG-12 4GNC TITLE HUMAN SMP30/GNL-1,5-AG COMPLEX COMPND MOL_ID: 1; COMPND 2 MOLECULE: REGUCALCIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: SMP30, GNL, RC, GLUCONOLACTONASE, SENESCENCE MARKER PROTEIN COMPND 5 30; COMPND 6 EC: 3.1.1.17; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: SMP30; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3) ROSETTA2 PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET-21B(+) KEYWDS BETA PROPELLER STRUCTURE, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR S.AIZAWA,M.SENDA,A.HARADA,N.MARUYAMA,T.ISHIDA,T.AIGAKI,A.ISHIGAMI, AUTHOR 2 T.SENDA REVDAT 3 08-NOV-23 4GNC 1 REMARK HETSYN REVDAT 2 29-JUL-20 4GNC 1 COMPND REMARK HETNAM LINK REVDAT 2 2 1 SITE REVDAT 1 10-APR-13 4GNC 0 JRNL AUTH S.AIZAWA,M.SENDA,A.HARADA,N.MARUYAMA,T.ISHIDA,T.AIGAKI, JRNL AUTH 2 A.ISHIGAMI,T.SENDA JRNL TITL STRUCTURAL BASIS OF THE GAMMA-LACTONE-RING FORMATION IN JRNL TITL 2 ASCORBIC ACID BIOSYNTHESIS BY THE SENESCENCE MARKER JRNL TITL 3 PROTEIN-30/GLUCONOLACTONASE JRNL REF PLOS ONE V. 8 53706 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 23349732 JRNL DOI 10.1371/JOURNAL.PONE.0053706 REMARK 2 REMARK 2 RESOLUTION. 1.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 47.29 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 54737 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.195 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.070 REMARK 3 FREE R VALUE TEST SET COUNT : 2776 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 47.3043 - 4.7471 0.99 2696 167 0.1762 0.1886 REMARK 3 2 4.7471 - 3.7684 0.99 2645 145 0.1471 0.1698 REMARK 3 3 3.7684 - 3.2922 0.99 2634 133 0.1730 0.1874 REMARK 3 4 3.2922 - 2.9912 1.00 2656 121 0.1965 0.2194 REMARK 3 5 2.9912 - 2.7769 0.99 2618 136 0.2064 0.2781 REMARK 3 6 2.7769 - 2.6131 0.99 2601 160 0.2107 0.2685 REMARK 3 7 2.6131 - 2.4823 1.00 2603 140 0.2120 0.2897 REMARK 3 8 2.4823 - 2.3742 1.00 2608 160 0.2096 0.2461 REMARK 3 9 2.3742 - 2.2828 1.00 2613 132 0.2040 0.2564 REMARK 3 10 2.2828 - 2.2041 1.00 2627 135 0.2057 0.2533 REMARK 3 11 2.2041 - 2.1351 1.00 2628 136 0.2125 0.2522 REMARK 3 12 2.1351 - 2.0741 1.00 2583 149 0.2048 0.2187 REMARK 3 13 2.0741 - 2.0195 1.00 2610 140 0.2128 0.2517 REMARK 3 14 2.0195 - 1.9702 1.00 2608 137 0.2177 0.2604 REMARK 3 15 1.9702 - 1.9254 1.00 2592 142 0.2226 0.2937 REMARK 3 16 1.9254 - 1.8845 0.99 2580 160 0.2306 0.3100 REMARK 3 17 1.8845 - 1.8468 0.99 2597 130 0.2348 0.2641 REMARK 3 18 1.8468 - 1.8119 0.99 2596 122 0.2496 0.3264 REMARK 3 19 1.8119 - 1.7796 0.98 2586 122 0.2536 0.2711 REMARK 3 20 1.7796 - 1.7494 0.86 2280 109 0.2736 0.3525 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.190 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 25.120 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 19.95 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 25.48 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 4710 REMARK 3 ANGLE : 1.139 6440 REMARK 3 CHIRALITY : 0.079 712 REMARK 3 PLANARITY : 0.006 826 REMARK 3 DIHEDRAL : 13.232 1686 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GNC COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 22-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074399. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 13-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : PHOTON FACTORY REMARK 200 BEAMLINE : BL-17A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 54772 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.749 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.81 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4GNB REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 40.64 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.07 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 28% PEG6000, 100MM TRIS-HCL, 5MM REMARK 280 CACL2, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 25.10100 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 SER A 3 OG REMARK 470 ASP A 55 CG OD1 OD2 REMARK 470 GLU A 84 CG CD OE1 OE2 REMARK 470 SER A 86 OG REMARK 470 LYS A 98 CG CD CE NZ REMARK 470 GLU A 120 CG CD OE1 OE2 REMARK 470 GLU A 121 CG CD OE1 OE2 REMARK 470 THR A 122 OG1 CG2 REMARK 470 PRO A 124 CG CD REMARK 470 VAL A 126 CG1 CG2 REMARK 470 LEU A 127 CG CD1 CD2 REMARK 470 LYS A 163 CG CD CE NZ REMARK 470 GLN A 183 CG CD OE1 NE2 REMARK 470 LYS A 198 CG CD CE NZ REMARK 470 GLU A 199 CG CD OE1 OE2 REMARK 470 LYS A 233 CG CD CE NZ REMARK 470 LYS A 253 CG CD CE NZ REMARK 470 GLU A 270 CG CD OE1 OE2 REMARK 470 LEU A 273 CG CD1 CD2 REMARK 470 ARG A 274 CG CD NE CZ NH1 NH2 REMARK 470 SER B 3 OG REMARK 470 LYS B 5 CG CD CE NZ REMARK 470 GLU B 7 CG CD OE1 OE2 REMARK 470 LYS B 83 CG CD CE NZ REMARK 470 GLU B 84 CG CD OE1 OE2 REMARK 470 ASN B 95 CG OD1 ND2 REMARK 470 ASP B 96 CG OD1 OD2 REMARK 470 LYS B 98 CG CD CE NZ REMARK 470 THR B 122 OG1 CG2 REMARK 470 VAL B 126 CG1 CG2 REMARK 470 GLN B 183 CG CD OE1 NE2 REMARK 470 GLN B 186 CG CD OE1 NE2 REMARK 470 LYS B 195 CG CD CE NZ REMARK 470 LYS B 198 CG CD CE NZ REMARK 470 GLU B 199 CG CD OE1 OE2 REMARK 470 LYS B 233 CG CD CE NZ REMARK 470 LYS B 253 CG CD CE NZ REMARK 470 GLU B 270 CG CD OE1 OE2 REMARK 480 REMARK 480 ZERO OCCUPANCY ATOM REMARK 480 THE FOLLOWING RESIDUES HAVE ATOMS MODELED WITH ZERO REMARK 480 OCCUPANCY. THE LOCATION AND PROPERTIES OF THESE ATOMS REMARK 480 MAY NOT BE RELIABLE. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 480 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 480 M RES C SSEQI ATOMS REMARK 480 ASP B 104 CG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP A 104 O HOH A 476 1.82 REMARK 500 ND2 ASN A 254 O6 ASO A 302 2.04 REMARK 500 OD2 ASP B 104 O HOH B 474 2.05 REMARK 500 OE2 GLU B 18 O HOH B 474 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 CYS A 16 84.45 -156.39 REMARK 500 ASN A 99 73.77 -162.52 REMARK 500 ASN A 103 -120.19 -121.80 REMARK 500 ASP A 148 -153.47 -121.85 REMARK 500 ASN A 154 -130.67 -121.70 REMARK 500 ASN A 189 62.65 60.83 REMARK 500 GLN A 201 -127.82 54.17 REMARK 500 ASP A 204 -111.74 -125.00 REMARK 500 ASN A 220 -3.44 79.32 REMARK 500 ASN B 99 45.36 -142.79 REMARK 500 ASN B 103 -123.97 -119.77 REMARK 500 HIS B 141 5.29 81.22 REMARK 500 ASP B 148 -158.99 -121.12 REMARK 500 ASN B 154 -134.62 -126.95 REMARK 500 GLN B 201 -126.19 49.75 REMARK 500 ASP B 204 -109.45 -124.56 REMARK 500 ASN B 220 -6.96 77.72 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA A 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 18 OE2 REMARK 620 2 ASP A 104 OD1 99.3 REMARK 620 3 ASP A 104 OD2 99.1 52.3 REMARK 620 4 ASN A 154 OD1 154.7 77.4 58.7 REMARK 620 5 ASP A 204 OD1 100.6 152.4 105.4 76.5 REMARK 620 6 ASO A 303 O2 65.0 139.7 159.4 132.3 67.0 REMARK 620 7 ASO A 303 O3 92.4 73.7 125.8 110.2 124.2 70.4 REMARK 620 8 HOH A 476 O 61.3 82.9 44.1 93.4 90.0 115.4 141.5 REMARK 620 N 1 2 3 4 5 6 7 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CA B 301 CA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 18 OE2 REMARK 620 2 ASP B 104 OD1 99.5 REMARK 620 3 ASP B 104 OD2 102.1 51.1 REMARK 620 4 ASN B 154 OD1 162.0 74.4 60.7 REMARK 620 5 ASP B 204 OD1 103.0 146.1 99.0 76.4 REMARK 620 6 ASO B 302 O3 104.2 77.9 125.5 91.2 119.8 REMARK 620 7 ASO B 302 O2 75.5 143.1 165.5 119.6 68.2 68.4 REMARK 620 8 HOH B 474 O 56.1 79.4 49.1 105.9 92.4 146.6 122.3 REMARK 620 N 1 2 3 4 5 6 7 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GN7 RELATED DB: PDB REMARK 900 RELATED ID: 4GN8 RELATED DB: PDB REMARK 900 RELATED ID: 4GN9 RELATED DB: PDB REMARK 900 RELATED ID: 4GNA RELATED DB: PDB REMARK 900 RELATED ID: 4GNB RELATED DB: PDB DBREF 4GNC A 1 299 UNP Q15493 RGN_HUMAN 1 299 DBREF 4GNC B 1 299 UNP Q15493 RGN_HUMAN 1 299 SEQRES 1 A 299 MET SER SER ILE LYS ILE GLU CYS VAL LEU PRO GLU ASN SEQRES 2 A 299 CYS ARG CYS GLY GLU SER PRO VAL TRP GLU GLU VAL SER SEQRES 3 A 299 ASN SER LEU LEU PHE VAL ASP ILE PRO ALA LYS LYS VAL SEQRES 4 A 299 CYS ARG TRP ASP SER PHE THR LYS GLN VAL GLN ARG VAL SEQRES 5 A 299 THR MET ASP ALA PRO VAL SER SER VAL ALA LEU ARG GLN SEQRES 6 A 299 SER GLY GLY TYR VAL ALA THR ILE GLY THR LYS PHE CYS SEQRES 7 A 299 ALA LEU ASN TRP LYS GLU GLN SER ALA VAL VAL LEU ALA SEQRES 8 A 299 THR VAL ASP ASN ASP LYS LYS ASN ASN ARG PHE ASN ASP SEQRES 9 A 299 GLY LYS VAL ASP PRO ALA GLY ARG TYR PHE ALA GLY THR SEQRES 10 A 299 MET ALA GLU GLU THR ALA PRO ALA VAL LEU GLU ARG HIS SEQRES 11 A 299 GLN GLY ALA LEU TYR SER LEU PHE PRO ASP HIS HIS VAL SEQRES 12 A 299 LYS LYS TYR PHE ASP GLN VAL ASP ILE SER ASN GLY LEU SEQRES 13 A 299 ASP TRP SER LEU ASP HIS LYS ILE PHE TYR TYR ILE ASP SEQRES 14 A 299 SER LEU SER TYR SER VAL ASP ALA PHE ASP TYR ASP LEU SEQRES 15 A 299 GLN THR GLY GLN ILE SER ASN ARG ARG SER VAL TYR LYS SEQRES 16 A 299 LEU GLU LYS GLU GLU GLN ILE PRO ASP GLY MET CYS ILE SEQRES 17 A 299 ASP ALA GLU GLY LYS LEU TRP VAL ALA CYS TYR ASN GLY SEQRES 18 A 299 GLY ARG VAL ILE ARG LEU ASP PRO VAL THR GLY LYS ARG SEQRES 19 A 299 LEU GLN THR VAL LYS LEU PRO VAL ASP LYS THR THR SER SEQRES 20 A 299 CYS CYS PHE GLY GLY LYS ASN TYR SER GLU MET TYR VAL SEQRES 21 A 299 THR CYS ALA ARG ASP GLY MET ASP PRO GLU GLY LEU LEU SEQRES 22 A 299 ARG GLN PRO GLU ALA GLY GLY ILE PHE LYS ILE THR GLY SEQRES 23 A 299 LEU GLY VAL LYS GLY ILE ALA PRO TYR SER TYR ALA GLY SEQRES 1 B 299 MET SER SER ILE LYS ILE GLU CYS VAL LEU PRO GLU ASN SEQRES 2 B 299 CYS ARG CYS GLY GLU SER PRO VAL TRP GLU GLU VAL SER SEQRES 3 B 299 ASN SER LEU LEU PHE VAL ASP ILE PRO ALA LYS LYS VAL SEQRES 4 B 299 CYS ARG TRP ASP SER PHE THR LYS GLN VAL GLN ARG VAL SEQRES 5 B 299 THR MET ASP ALA PRO VAL SER SER VAL ALA LEU ARG GLN SEQRES 6 B 299 SER GLY GLY TYR VAL ALA THR ILE GLY THR LYS PHE CYS SEQRES 7 B 299 ALA LEU ASN TRP LYS GLU GLN SER ALA VAL VAL LEU ALA SEQRES 8 B 299 THR VAL ASP ASN ASP LYS LYS ASN ASN ARG PHE ASN ASP SEQRES 9 B 299 GLY LYS VAL ASP PRO ALA GLY ARG TYR PHE ALA GLY THR SEQRES 10 B 299 MET ALA GLU GLU THR ALA PRO ALA VAL LEU GLU ARG HIS SEQRES 11 B 299 GLN GLY ALA LEU TYR SER LEU PHE PRO ASP HIS HIS VAL SEQRES 12 B 299 LYS LYS TYR PHE ASP GLN VAL ASP ILE SER ASN GLY LEU SEQRES 13 B 299 ASP TRP SER LEU ASP HIS LYS ILE PHE TYR TYR ILE ASP SEQRES 14 B 299 SER LEU SER TYR SER VAL ASP ALA PHE ASP TYR ASP LEU SEQRES 15 B 299 GLN THR GLY GLN ILE SER ASN ARG ARG SER VAL TYR LYS SEQRES 16 B 299 LEU GLU LYS GLU GLU GLN ILE PRO ASP GLY MET CYS ILE SEQRES 17 B 299 ASP ALA GLU GLY LYS LEU TRP VAL ALA CYS TYR ASN GLY SEQRES 18 B 299 GLY ARG VAL ILE ARG LEU ASP PRO VAL THR GLY LYS ARG SEQRES 19 B 299 LEU GLN THR VAL LYS LEU PRO VAL ASP LYS THR THR SER SEQRES 20 B 299 CYS CYS PHE GLY GLY LYS ASN TYR SER GLU MET TYR VAL SEQRES 21 B 299 THR CYS ALA ARG ASP GLY MET ASP PRO GLU GLY LEU LEU SEQRES 22 B 299 ARG GLN PRO GLU ALA GLY GLY ILE PHE LYS ILE THR GLY SEQRES 23 B 299 LEU GLY VAL LYS GLY ILE ALA PRO TYR SER TYR ALA GLY HET CA A 301 1 HET ASO A 302 11 HET ASO A 303 11 HET CA B 301 1 HET ASO B 302 11 HET ASO B 303 11 HET ASO B 304 11 HETNAM CA CALCIUM ION HETNAM ASO 1,5-ANHYDRO-D-GLUCITOL HETSYN ASO 1,5-ANHYDROSORBITOL FORMUL 3 CA 2(CA 2+) FORMUL 4 ASO 5(C6 H12 O5) FORMUL 10 HOH *159(H2 O) HELIX 1 1 GLU A 197 GLN A 201 5 5 HELIX 2 2 GLY A 252 SER A 256 5 5 HELIX 3 3 ASP A 268 GLN A 275 1 8 HELIX 4 4 GLU B 24 SER B 26 5 3 HELIX 5 5 GLU B 197 GLN B 201 5 5 HELIX 6 6 GLY B 252 SER B 256 5 5 HELIX 7 7 ASP B 268 GLN B 275 1 8 SHEET 1 A 4 LYS A 5 LEU A 10 0 SHEET 2 A 4 ILE A 281 THR A 285 -1 O LYS A 283 N GLU A 7 SHEET 3 A 4 GLU A 257 CYS A 262 -1 N MET A 258 O ILE A 284 SHEET 4 A 4 THR A 245 GLY A 251 -1 N CYS A 249 O TYR A 259 SHEET 1 B 4 GLY A 17 GLU A 23 0 SHEET 2 B 4 SER A 28 ASP A 33 -1 O LEU A 30 N VAL A 21 SHEET 3 B 4 LYS A 38 ASP A 43 -1 O CYS A 40 N PHE A 31 SHEET 4 B 4 VAL A 49 THR A 53 -1 O VAL A 52 N VAL A 39 SHEET 1 C 4 VAL A 58 LEU A 63 0 SHEET 2 C 4 TYR A 69 ILE A 73 -1 O VAL A 70 N ALA A 62 SHEET 3 C 4 LYS A 76 ASN A 81 -1 O LEU A 80 N TYR A 69 SHEET 4 C 4 SER A 86 THR A 92 -1 O SER A 86 N ASN A 81 SHEET 1 D 4 ASN A 100 VAL A 107 0 SHEET 2 D 4 TYR A 113 ALA A 119 -1 O GLY A 116 N ASN A 103 SHEET 3 D 4 GLY A 132 LEU A 137 -1 O LEU A 137 N TYR A 113 SHEET 4 D 4 VAL A 143 VAL A 150 -1 O TYR A 146 N LEU A 134 SHEET 1 E 4 SER A 153 TRP A 158 0 SHEET 2 E 4 ILE A 164 ASP A 169 -1 O ILE A 168 N ASN A 154 SHEET 3 E 4 SER A 174 ASP A 181 -1 O ASP A 176 N TYR A 167 SHEET 4 E 4 GLN A 186 LYS A 195 -1 O ARG A 191 N ALA A 177 SHEET 1 F 4 ILE A 202 ILE A 208 0 SHEET 2 F 4 LEU A 214 TYR A 219 -1 O TRP A 215 N CYS A 207 SHEET 3 F 4 ARG A 223 ASP A 228 -1 O LEU A 227 N LEU A 214 SHEET 4 F 4 LYS A 233 LYS A 239 -1 O LEU A 235 N ARG A 226 SHEET 1 G 4 LYS B 5 LEU B 10 0 SHEET 2 G 4 ILE B 281 THR B 285 -1 O LYS B 283 N GLU B 7 SHEET 3 G 4 GLU B 257 CYS B 262 -1 N MET B 258 O ILE B 284 SHEET 4 G 4 THR B 245 GLY B 251 -1 N CYS B 249 O TYR B 259 SHEET 1 H 4 GLY B 17 GLU B 23 0 SHEET 2 H 4 SER B 28 ASP B 33 -1 O LEU B 30 N VAL B 21 SHEET 3 H 4 LYS B 38 ASP B 43 -1 O CYS B 40 N PHE B 31 SHEET 4 H 4 VAL B 49 THR B 53 -1 O VAL B 52 N VAL B 39 SHEET 1 I 4 VAL B 58 LEU B 63 0 SHEET 2 I 4 TYR B 69 ILE B 73 -1 O VAL B 70 N ALA B 62 SHEET 3 I 4 LYS B 76 ASN B 81 -1 O CYS B 78 N ALA B 71 SHEET 4 I 4 SER B 86 THR B 92 -1 O LEU B 90 N PHE B 77 SHEET 1 J 4 ASN B 100 VAL B 107 0 SHEET 2 J 4 TYR B 113 ALA B 119 -1 O GLY B 116 N ASN B 103 SHEET 3 J 4 GLY B 132 LEU B 137 -1 O LEU B 137 N TYR B 113 SHEET 4 J 4 VAL B 143 VAL B 150 -1 O VAL B 150 N GLY B 132 SHEET 1 K 4 SER B 153 TRP B 158 0 SHEET 2 K 4 ILE B 164 ASP B 169 -1 O TYR B 166 N ASP B 157 SHEET 3 K 4 SER B 174 TYR B 180 -1 O ASP B 176 N TYR B 167 SHEET 4 K 4 ILE B 187 LYS B 195 -1 O VAL B 193 N VAL B 175 SHEET 1 L 4 ILE B 202 ILE B 208 0 SHEET 2 L 4 LEU B 214 TYR B 219 -1 O TRP B 215 N CYS B 207 SHEET 3 L 4 ARG B 223 ASP B 228 -1 O LEU B 227 N LEU B 214 SHEET 4 L 4 LYS B 233 LYS B 239 -1 O LEU B 235 N ARG B 226 LINK OE2 GLU A 18 CA CA A 301 1555 1555 2.30 LINK OD1 ASP A 104 CA CA A 301 1555 1555 2.41 LINK OD2 ASP A 104 CA CA A 301 1555 1555 2.53 LINK OD1 ASN A 154 CA CA A 301 1555 1555 2.06 LINK OD1 ASP A 204 CA CA A 301 1555 1555 2.30 LINK CA CA A 301 O2 ASO A 303 1555 1555 2.41 LINK CA CA A 301 O3 ASO A 303 1555 1555 2.47 LINK CA CA A 301 O HOH A 476 1555 1555 2.29 LINK OE2 GLU B 18 CA CA B 301 1555 1555 2.33 LINK OD1AASP B 104 CA CA B 301 1555 1555 2.44 LINK OD2AASP B 104 CA CA B 301 1555 1555 2.59 LINK OD1 ASN B 154 CA CA B 301 1555 1555 2.14 LINK OD1 ASP B 204 CA CA B 301 1555 1555 2.28 LINK CA CA B 301 O3 ASO B 302 1555 1555 2.36 LINK CA CA B 301 O2 ASO B 302 1555 1555 2.40 LINK CA CA B 301 O HOH B 474 1555 1555 2.28 CISPEP 1 PRO A 124 ALA A 125 0 1.70 CRYST1 64.407 50.202 86.569 90.00 99.65 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015526 0.000000 0.002641 0.00000 SCALE2 0.000000 0.019920 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011717 0.00000