HEADER TRANSFERASE 20-AUG-12 4GP7 TITLE POLYNUCLEOTIDE KINASE COMPND MOL_ID: 1; COMPND 2 MOLECULE: METALLOPHOSPHOESTERASE; COMPND 3 CHAIN: A, B; COMPND 4 EC: 2.7.1.78; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CLOSTRIDIUM THERMOCELLUM; SOURCE 3 ORGANISM_TAXID: 203119; SOURCE 4 STRAIN: ATCC 27405 / DSM 1237; SOURCE 5 GENE: CTHE_2768; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS POLYNUCLEOTIDE KINASE PHOSPHATASE, RNA REPAIR, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR L.K.WANG,U.DAS,P.SMITH,S.SHUMAN REVDAT 3 15-NOV-17 4GP7 1 REMARK REVDAT 2 05-DEC-12 4GP7 1 JRNL REVDAT 1 14-NOV-12 4GP7 0 JRNL AUTH L.K.WANG,U.DAS,P.SMITH,S.SHUMAN JRNL TITL STRUCTURE AND MECHANISM OF THE POLYNUCLEOTIDE KINASE JRNL TITL 2 COMPONENT OF THE BACTERIAL PNKP-HEN1 RNA REPAIR SYSTEM. JRNL REF RNA V. 18 2277 2012 JRNL REFN ISSN 1355-8382 JRNL PMID 23118415 JRNL DOI 10.1261/RNA.036061.112 REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.7.3_928) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 44.54 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.210 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 24992 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.180 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.230 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 7.910 REMARK 3 FREE R VALUE TEST SET COUNT : 1977 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 44.5492 - 4.8175 1.00 1800 153 0.1661 0.1807 REMARK 3 2 4.8175 - 3.8245 1.00 1706 146 0.1341 0.1758 REMARK 3 3 3.8245 - 3.3412 1.00 1677 144 0.1676 0.1979 REMARK 3 4 3.3412 - 3.0358 1.00 1663 143 0.1779 0.2366 REMARK 3 5 3.0358 - 2.8182 1.00 1665 143 0.1847 0.2414 REMARK 3 6 2.8182 - 2.6521 1.00 1648 142 0.1768 0.2229 REMARK 3 7 2.6521 - 2.5193 1.00 1623 140 0.1855 0.2548 REMARK 3 8 2.5193 - 2.4096 1.00 1658 141 0.1937 0.2764 REMARK 3 9 2.4096 - 2.3169 0.99 1628 141 0.1866 0.2549 REMARK 3 10 2.3169 - 2.2369 0.99 1611 136 0.1718 0.2770 REMARK 3 11 2.2369 - 2.1670 0.99 1610 136 0.1753 0.2288 REMARK 3 12 2.1670 - 2.1050 0.98 1608 140 0.1906 0.2537 REMARK 3 13 2.1050 - 2.0496 0.97 1578 136 0.2103 0.2958 REMARK 3 14 2.0496 - 2.0000 0.93 1540 136 0.2346 0.3519 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.20 REMARK 3 SHRINKAGE RADIUS : 0.98 REMARK 3 K_SOL : 0.32 REMARK 3 B_SOL : 19.40 REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.240 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.640 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.13280 REMARK 3 B22 (A**2) : 0.87490 REMARK 3 B33 (A**2) : -1.00770 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2899 REMARK 3 ANGLE : 1.222 3937 REMARK 3 CHIRALITY : 0.071 437 REMARK 3 PLANARITY : 0.005 494 REMARK 3 DIHEDRAL : 16.638 1124 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GP7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 30-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074466. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 02-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 130 REMARK 200 PH : 5.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X25 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 25287 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.03 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.33 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM CITRATE, 5MM DTT, 100MM REMARK 280 MGCL2, 16% PEG 3350, 2MM ATP, PH 5.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 22.65300 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 59.77300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 33.39050 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 59.77300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 22.65300 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 33.39050 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3760 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16660 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -37.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 67.95900 REMARK 350 BIOMT2 2 0.000000 -1.000000 0.000000 66.78100 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 59.77300 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 1170 O HOH A 1181 2.05 REMARK 500 O HOH A 1150 O HOH B 1175 2.18 REMARK 500 OD2 ASP A 38 NH2 ARG A 123 2.18 REMARK 500 O4 CIT A 1003 O HOH A 1176 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 1177 O HOH B 1154 2665 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG B1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP B1001 O3G REMARK 620 2 ATP B1001 O1B 93.4 REMARK 620 3 SER B 22 OG 170.2 83.5 REMARK 620 4 HOH B1119 O 95.5 90.2 93.8 REMARK 620 5 HOH B1120 O 89.1 90.5 81.7 175.3 REMARK 620 6 HOH B1118 O 94.5 171.4 88.2 92.3 86.3 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A1002 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ATP A1001 O3G REMARK 620 2 ATP A1001 O1B 90.1 REMARK 620 3 SER A 22 OG 174.0 93.0 REMARK 620 4 HOH A1129 O 92.0 88.3 93.3 REMARK 620 5 HOH A1131 O 85.2 94.7 89.4 175.8 REMARK 620 6 HOH A1130 O 88.6 176.8 88.0 94.7 82.2 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP A 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CIT A 1003 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ATP B 1001 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG B 1002 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 1003 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GP6 RELATED DB: PDB REMARK 900 RELATED ID: 3TY5 RELATED DB: PDB REMARK 900 LIG DOMAIN OF CTH PNKP REMARK 900 RELATED ID: 3TY8 RELATED DB: PDB REMARK 900 LIG DOMAIN OF CTH PNKP REMARK 900 RELATED ID: 3TY9 RELATED DB: PDB REMARK 900 LIG DOMAIN OF CTH PNKP REMARK 900 RELATED ID: 4DRF RELATED DB: PDB REMARK 900 N-TERMINAL HEN1- C-TERMINAL LIG DOMAIN OF CTH HEN 1 PNKP REMARK 900 RELATED ID: 4E6N RELATED DB: PDB REMARK 900 N-TERMINAL HEN1- C-TERMINAL LIG DOMAIN OF CTH HEN 1 PNKP DBREF 4GP7 A 1 170 UNP A3DJ38 A3DJ38_CLOTH 1 170 DBREF 4GP7 B 1 170 UNP A3DJ38 A3DJ38_CLOTH 1 170 SEQADV 4GP7 SER A 0 UNP A3DJ38 EXPRESSION TAG SEQADV 4GP7 MSE A 44 UNP A3DJ38 VAL 44 ENGINEERED MUTATION SEQADV 4GP7 MSE A 93 UNP A3DJ38 ILE 93 ENGINEERED MUTATION SEQADV 4GP7 MSE A 137 UNP A3DJ38 LEU 137 ENGINEERED MUTATION SEQADV 4GP7 SER B 0 UNP A3DJ38 EXPRESSION TAG SEQADV 4GP7 MSE B 44 UNP A3DJ38 VAL 44 ENGINEERED MUTATION SEQADV 4GP7 MSE B 93 UNP A3DJ38 ILE 93 ENGINEERED MUTATION SEQADV 4GP7 MSE B 137 UNP A3DJ38 LEU 137 ENGINEERED MUTATION SEQRES 1 A 171 SER MSE LYS LEU THR ILE PRO GLU LEU SER LEU VAL VAL SEQRES 2 A 171 LEU ILE GLY SER SER GLY SER GLY LYS SER THR PHE ALA SEQRES 3 A 171 LYS LYS HIS PHE LYS PRO THR GLU VAL ILE SER SER ASP SEQRES 4 A 171 PHE CYS ARG GLY LEU MSE SER ASP ASP GLU ASN ASP GLN SEQRES 5 A 171 THR VAL THR GLY ALA ALA PHE ASP VAL LEU HIS TYR ILE SEQRES 6 A 171 VAL SER LYS ARG LEU GLN LEU GLY LYS LEU THR VAL VAL SEQRES 7 A 171 ASP ALA THR ASN VAL GLN GLU SER ALA ARG LYS PRO LEU SEQRES 8 A 171 ILE GLU MSE ALA LYS ASP TYR HIS CYS PHE PRO VAL ALA SEQRES 9 A 171 VAL VAL PHE ASN LEU PRO GLU LYS VAL CYS GLN GLU ARG SEQRES 10 A 171 ASN LYS ASN ARG THR ASP ARG GLN VAL GLU GLU TYR VAL SEQRES 11 A 171 ILE ARG LYS HIS THR GLN GLN MSE LYS LYS SER ILE LYS SEQRES 12 A 171 GLY LEU GLN ARG GLU GLY PHE ARG TYR VAL TYR ILE LEU SEQRES 13 A 171 ASN SER PRO GLU GLU VAL GLU GLU VAL VAL PHE GLU ARG SEQRES 14 A 171 GLN PRO SEQRES 1 B 171 SER MSE LYS LEU THR ILE PRO GLU LEU SER LEU VAL VAL SEQRES 2 B 171 LEU ILE GLY SER SER GLY SER GLY LYS SER THR PHE ALA SEQRES 3 B 171 LYS LYS HIS PHE LYS PRO THR GLU VAL ILE SER SER ASP SEQRES 4 B 171 PHE CYS ARG GLY LEU MSE SER ASP ASP GLU ASN ASP GLN SEQRES 5 B 171 THR VAL THR GLY ALA ALA PHE ASP VAL LEU HIS TYR ILE SEQRES 6 B 171 VAL SER LYS ARG LEU GLN LEU GLY LYS LEU THR VAL VAL SEQRES 7 B 171 ASP ALA THR ASN VAL GLN GLU SER ALA ARG LYS PRO LEU SEQRES 8 B 171 ILE GLU MSE ALA LYS ASP TYR HIS CYS PHE PRO VAL ALA SEQRES 9 B 171 VAL VAL PHE ASN LEU PRO GLU LYS VAL CYS GLN GLU ARG SEQRES 10 B 171 ASN LYS ASN ARG THR ASP ARG GLN VAL GLU GLU TYR VAL SEQRES 11 B 171 ILE ARG LYS HIS THR GLN GLN MSE LYS LYS SER ILE LYS SEQRES 12 B 171 GLY LEU GLN ARG GLU GLY PHE ARG TYR VAL TYR ILE LEU SEQRES 13 B 171 ASN SER PRO GLU GLU VAL GLU GLU VAL VAL PHE GLU ARG SEQRES 14 B 171 GLN PRO MODRES 4GP7 MSE A 1 MET SELENOMETHIONINE MODRES 4GP7 MSE A 44 MET SELENOMETHIONINE MODRES 4GP7 MSE A 93 MET SELENOMETHIONINE MODRES 4GP7 MSE A 137 MET SELENOMETHIONINE MODRES 4GP7 MSE B 1 MET SELENOMETHIONINE MODRES 4GP7 MSE B 44 MET SELENOMETHIONINE MODRES 4GP7 MSE B 93 MET SELENOMETHIONINE MODRES 4GP7 MSE B 137 MET SELENOMETHIONINE HET MSE A 1 8 HET MSE A 44 8 HET MSE A 93 8 HET MSE A 137 8 HET MSE B 1 8 HET MSE B 44 8 HET MSE B 93 8 HET MSE B 137 8 HET ATP A1001 31 HET MG A1002 1 HET CIT A1003 13 HET ATP B1001 31 HET MG B1002 1 HET NA B1003 1 HETNAM MSE SELENOMETHIONINE HETNAM ATP ADENOSINE-5'-TRIPHOSPHATE HETNAM MG MAGNESIUM ION HETNAM CIT CITRIC ACID HETNAM NA SODIUM ION FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 3 ATP 2(C10 H16 N5 O13 P3) FORMUL 4 MG 2(MG 2+) FORMUL 5 CIT C6 H8 O7 FORMUL 8 NA NA 1+ FORMUL 9 HOH *188(H2 O) HELIX 1 1 GLY A 20 PHE A 29 1 10 HELIX 2 2 LYS A 30 THR A 32 5 3 HELIX 3 3 SER A 37 SER A 45 1 9 HELIX 4 4 ASP A 50 THR A 52 5 3 HELIX 5 5 VAL A 53 LEU A 71 1 19 HELIX 6 6 GLN A 83 TYR A 97 1 15 HELIX 7 7 PRO A 109 ASN A 119 1 11 HELIX 8 8 GLU A 126 ILE A 141 1 16 HELIX 9 9 GLY A 143 GLY A 148 1 6 HELIX 10 10 SER A 157 GLU A 163 1 7 HELIX 11 11 GLY B 20 PHE B 29 1 10 HELIX 12 12 LYS B 30 THR B 32 5 3 HELIX 13 13 SER B 37 SER B 45 1 9 HELIX 14 14 VAL B 53 LEU B 71 1 19 HELIX 15 15 GLN B 83 TYR B 97 1 15 HELIX 16 16 PRO B 109 ARG B 120 1 12 HELIX 17 17 GLU B 126 ILE B 141 1 16 HELIX 18 18 GLY B 143 GLY B 148 1 6 HELIX 19 19 SER B 157 GLU B 163 1 7 SHEET 1 A 2 MSE A 1 PRO A 6 0 SHEET 2 A 2 VAL A 164 GLN A 169 1 O VAL A 165 N LEU A 3 SHEET 1 B 5 VAL A 34 SER A 36 0 SHEET 2 B 5 THR A 75 ASP A 78 1 O VAL A 76 N ILE A 35 SHEET 3 B 5 SER A 9 ILE A 14 1 N VAL A 11 O VAL A 77 SHEET 4 B 5 PHE A 100 PHE A 106 1 O VAL A 102 N VAL A 12 SHEET 5 B 5 TYR A 151 LEU A 155 1 O LEU A 155 N VAL A 105 SHEET 1 C 2 MSE B 1 THR B 4 0 SHEET 2 C 2 VAL B 164 GLU B 167 1 O GLU B 167 N LEU B 3 SHEET 1 D 5 VAL B 34 SER B 36 0 SHEET 2 D 5 THR B 75 ASP B 78 1 O VAL B 76 N ILE B 35 SHEET 3 D 5 SER B 9 ILE B 14 1 N VAL B 11 O VAL B 77 SHEET 4 D 5 PHE B 100 PHE B 106 1 O VAL B 102 N VAL B 12 SHEET 5 D 5 TYR B 151 LEU B 155 1 O LEU B 155 N VAL B 105 LINK C SER A 0 N MSE A 1 1555 1555 1.33 LINK C MSE A 1 N LYS A 2 1555 1555 1.32 LINK C LEU A 43 N MSE A 44 1555 1555 1.33 LINK C MSE A 44 N SER A 45 1555 1555 1.33 LINK C GLU A 92 N MSE A 93 1555 1555 1.32 LINK C MSE A 93 N ALA A 94 1555 1555 1.33 LINK C GLN A 136 N MSE A 137 1555 1555 1.33 LINK C MSE A 137 N LYS A 138 1555 1555 1.33 LINK C SER B 0 N MSE B 1 1555 1555 1.33 LINK C MSE B 1 N LYS B 2 1555 1555 1.33 LINK C LEU B 43 N MSE B 44 1555 1555 1.33 LINK C MSE B 44 N SER B 45 1555 1555 1.33 LINK C GLU B 92 N MSE B 93 1555 1555 1.33 LINK C MSE B 93 N ALA B 94 1555 1555 1.33 LINK C GLN B 136 N MSE B 137 1555 1555 1.33 LINK C MSE B 137 N LYS B 138 1555 1555 1.33 LINK O3G ATP B1001 MG MG B1002 1555 1555 1.92 LINK O3G ATP A1001 MG MG A1002 1555 1555 1.99 LINK O1B ATP A1001 MG MG A1002 1555 1555 2.04 LINK OG SER A 22 MG MG A1002 1555 1555 2.06 LINK O1B ATP B1001 MG MG B1002 1555 1555 2.07 LINK OG SER B 22 MG MG B1002 1555 1555 2.09 LINK MG MG A1002 O HOH A1129 1555 1555 2.06 LINK MG MG B1002 O HOH B1119 1555 1555 2.06 LINK MG MG B1002 O HOH B1120 1555 1555 2.07 LINK MG MG A1002 O HOH A1131 1555 1555 2.10 LINK MG MG A1002 O HOH A1130 1555 1555 2.11 LINK MG MG B1002 O HOH B1118 1555 1555 2.12 SITE 1 AC1 21 SER A 16 SER A 17 GLY A 18 SER A 19 SITE 2 AC1 21 GLY A 20 LYS A 21 SER A 22 THR A 23 SITE 3 AC1 21 ASP A 38 ARG A 116 ARG A 120 ARG A 123 SITE 4 AC1 21 MG A1002 HOH A1129 HOH A1130 HOH A1131 SITE 5 AC1 21 HOH A1132 HOH A1151 HOH A1179 HOH A1181 SITE 6 AC1 21 HOH A1190 SITE 1 AC2 5 SER A 22 ATP A1001 HOH A1129 HOH A1130 SITE 2 AC2 5 HOH A1131 SITE 1 AC3 8 ASN A 107 ILE A 141 ILE A 154 ASN A 156 SITE 2 AC3 8 HOH A1154 HOH A1176 ILE B 141 LYS B 142 SITE 1 AC4 19 SER B 16 SER B 17 GLY B 18 SER B 19 SITE 2 AC4 19 GLY B 20 LYS B 21 SER B 22 THR B 23 SITE 3 AC4 19 ARG B 116 ARG B 120 MG B1002 HOH B1118 SITE 4 AC4 19 HOH B1119 HOH B1120 HOH B1130 HOH B1133 SITE 5 AC4 19 HOH B1138 HOH B1139 HOH B1151 SITE 1 AC5 5 SER B 22 ATP B1001 HOH B1118 HOH B1119 SITE 2 AC5 5 HOH B1120 SITE 1 AC6 3 PHE B 100 ARG B 150 TYR B 151 CRYST1 45.306 66.781 119.546 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.022072 0.000000 0.000000 0.00000 SCALE2 0.000000 0.014974 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008365 0.00000