HEADER LIGASE 21-AUG-12 4GPR TITLE CRYSTAL STRUCTURE OF EHUBC5, A UBIQUITIN CONJUGATING ENZYME FROM TITLE 2 ENTAMOEBA HISTOLYTICA COMPND MOL_ID: 1; COMPND 2 MOLECULE: UBIQUITIN-CONJUGATING ENZYME FAMILY PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ENTAMOEBA HISTOLYTICA; SOURCE 3 ORGANISM_TAXID: 5759; SOURCE 4 GENE: EHI_070750, EHI_083560, EHUBC5; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 7 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 8 EXPRESSION_SYSTEM_PLASMID: PLIC HIS KEYWDS E2, UBIQUITIN CONJUGATING ENZYME, UBIQUITIN CONJUGATION, EHUBA1, KEYWDS 2 EHRING1, THIOL ESTERIFICATION, LIGASE EXPDTA X-RAY DIFFRACTION AUTHOR D.E.BOSCH,D.P.SIDEROVSKI REVDAT 5 13-SEP-23 4GPR 1 REMARK LINK REVDAT 4 20-NOV-19 4GPR 1 SEQADV LINK REVDAT 3 13-FEB-13 4GPR 1 JRNL REVDAT 2 19-DEC-12 4GPR 1 JRNL REVDAT 1 12-DEC-12 4GPR 0 JRNL AUTH D.E.BOSCH,D.P.SIDEROVSKI JRNL TITL STRUCTURAL DETERMINANTS OF UBIQUITIN CONJUGATION IN JRNL TITL 2 ENTAMOEBA HISTOLYTICA. JRNL REF J.BIOL.CHEM. V. 288 2290 2013 JRNL REFN ISSN 0021-9258 JRNL PMID 23209297 JRNL DOI 10.1074/JBC.M112.417337 REMARK 2 REMARK 2 RESOLUTION. 1.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.07 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 3 NUMBER OF REFLECTIONS : 19950 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.171 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.020 REMARK 3 FREE R VALUE TEST SET COUNT : 1998 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 39.0808 - 3.8589 1.00 1398 157 0.1584 0.1692 REMARK 3 2 3.8589 - 3.0633 1.00 1330 146 0.1651 0.1939 REMARK 3 3 3.0633 - 2.6762 1.00 1308 143 0.1748 0.2122 REMARK 3 4 2.6762 - 2.4316 1.00 1291 147 0.1813 0.2050 REMARK 3 5 2.4316 - 2.2573 1.00 1288 142 0.1671 0.2040 REMARK 3 6 2.2573 - 2.1242 1.00 1286 144 0.1691 0.1966 REMARK 3 7 2.1242 - 2.0178 1.00 1284 140 0.1612 0.2134 REMARK 3 8 2.0178 - 1.9300 1.00 1273 147 0.1756 0.2112 REMARK 3 9 1.9300 - 1.8557 1.00 1294 144 0.1792 0.2453 REMARK 3 10 1.8557 - 1.7917 1.00 1263 138 0.1809 0.2508 REMARK 3 11 1.7917 - 1.7357 1.00 1282 130 0.1904 0.2243 REMARK 3 12 1.7357 - 1.6860 1.00 1264 145 0.1833 0.2134 REMARK 3 13 1.6860 - 1.6417 0.99 1243 138 0.1966 0.2484 REMARK 3 14 1.6417 - 1.6000 0.91 1148 137 0.2057 0.2595 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.290 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 14.90 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 1229 REMARK 3 ANGLE : 1.504 1678 REMARK 3 CHIRALITY : 0.099 183 REMARK 3 PLANARITY : 0.009 222 REMARK 3 DIHEDRAL : 13.000 462 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 12 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: (CHAIN A AND RESID 2:17) REMARK 3 ORIGIN FOR THE GROUP (A): -14.2929 8.5744 -3.7804 REMARK 3 T TENSOR REMARK 3 T11: 0.0641 T22: 0.0613 REMARK 3 T33: 0.1185 T12: 0.0139 REMARK 3 T13: -0.0522 T23: 0.0098 REMARK 3 L TENSOR REMARK 3 L11: 1.8784 L22: 1.2464 REMARK 3 L33: 0.9356 L12: -0.8358 REMARK 3 L13: -0.2897 L23: 0.2640 REMARK 3 S TENSOR REMARK 3 S11: 0.0496 S12: 0.0741 S13: -0.0365 REMARK 3 S21: -0.0496 S22: -0.0097 S23: 0.0981 REMARK 3 S31: -0.0369 S32: -0.1692 S33: -0.0146 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: (CHAIN A AND RESID 18:25) REMARK 3 ORIGIN FOR THE GROUP (A): -7.6851 8.5908 6.3679 REMARK 3 T TENSOR REMARK 3 T11: 0.1298 T22: 0.4036 REMARK 3 T33: 0.1806 T12: 0.0446 REMARK 3 T13: 0.0049 T23: 0.0457 REMARK 3 L TENSOR REMARK 3 L11: 2.3333 L22: 3.3948 REMARK 3 L33: 0.3293 L12: 0.1162 REMARK 3 L13: 0.4158 L23: 0.9498 REMARK 3 S TENSOR REMARK 3 S11: -0.0125 S12: -0.8863 S13: -0.3283 REMARK 3 S21: 0.5615 S22: -0.1148 S23: 0.1886 REMARK 3 S31: 0.1123 S32: -0.0682 S33: -0.1658 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: (CHAIN A AND RESID 26:41) REMARK 3 ORIGIN FOR THE GROUP (A): -2.8489 9.3336 0.5974 REMARK 3 T TENSOR REMARK 3 T11: 0.0322 T22: 0.0090 REMARK 3 T33: 0.0334 T12: 0.0056 REMARK 3 T13: 0.0453 T23: -0.0124 REMARK 3 L TENSOR REMARK 3 L11: 1.4399 L22: 1.2009 REMARK 3 L33: 1.3884 L12: 0.3511 REMARK 3 L13: -0.1755 L23: 0.1996 REMARK 3 S TENSOR REMARK 3 S11: -0.0870 S12: 0.0227 S13: 0.2710 REMARK 3 S21: 0.0413 S22: 0.0018 S23: 0.4056 REMARK 3 S31: -0.1347 S32: -0.1146 S33: -2.4716 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: (CHAIN A AND RESID 42:64) REMARK 3 ORIGIN FOR THE GROUP (A): -1.5644 2.5707 1.5732 REMARK 3 T TENSOR REMARK 3 T11: 0.0856 T22: 0.0454 REMARK 3 T33: 0.0756 T12: -0.0147 REMARK 3 T13: 0.0356 T23: -0.0160 REMARK 3 L TENSOR REMARK 3 L11: 1.4811 L22: 1.0512 REMARK 3 L33: 0.5104 L12: 0.0238 REMARK 3 L13: 0.5594 L23: -0.2662 REMARK 3 S TENSOR REMARK 3 S11: 0.0281 S12: 0.0774 S13: -0.0722 REMARK 3 S21: -0.0142 S22: 0.0502 S23: 0.1559 REMARK 3 S31: 0.0208 S32: -0.0328 S33: 0.8047 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: (CHAIN A AND RESID 65:70) REMARK 3 ORIGIN FOR THE GROUP (A): 3.3412 2.6640 -0.4491 REMARK 3 T TENSOR REMARK 3 T11: 0.0595 T22: 0.0938 REMARK 3 T33: 0.0689 T12: -0.0126 REMARK 3 T13: 0.0069 T23: -0.0126 REMARK 3 L TENSOR REMARK 3 L11: 2.1680 L22: 1.8594 REMARK 3 L33: 0.5175 L12: -0.0531 REMARK 3 L13: -0.2269 L23: -0.9530 REMARK 3 S TENSOR REMARK 3 S11: 0.0419 S12: 0.2959 S13: 0.0372 REMARK 3 S21: 0.0725 S22: -0.0133 S23: 0.0303 REMARK 3 S31: -0.1127 S32: 0.1690 S33: -0.0296 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: (CHAIN A AND RESID 71:86) REMARK 3 ORIGIN FOR THE GROUP (A): 8.3146 -2.7218 6.0112 REMARK 3 T TENSOR REMARK 3 T11: -0.0327 T22: 0.0305 REMARK 3 T33: 0.0667 T12: 0.0144 REMARK 3 T13: 0.0090 T23: -0.0174 REMARK 3 L TENSOR REMARK 3 L11: 0.7479 L22: 0.8094 REMARK 3 L33: 1.8505 L12: 0.7017 REMARK 3 L13: 0.6081 L23: 0.2801 REMARK 3 S TENSOR REMARK 3 S11: 0.0656 S12: 0.1041 S13: -0.3106 REMARK 3 S21: 0.0658 S22: -0.0512 S23: -0.1739 REMARK 3 S31: 0.0998 S32: 0.4570 S33: 0.7617 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: (CHAIN A AND RESID 87:92) REMARK 3 ORIGIN FOR THE GROUP (A): -2.6081 -9.7312 -2.8970 REMARK 3 T TENSOR REMARK 3 T11: 0.1591 T22: 0.0847 REMARK 3 T33: 0.2023 T12: 0.0089 REMARK 3 T13: -0.0430 T23: -0.0180 REMARK 3 L TENSOR REMARK 3 L11: 4.5901 L22: 3.4543 REMARK 3 L33: 4.9016 L12: 2.4925 REMARK 3 L13: 0.5606 L23: -2.8785 REMARK 3 S TENSOR REMARK 3 S11: 0.1165 S12: 0.2884 S13: -1.0854 REMARK 3 S21: -0.4421 S22: 0.1409 S23: -0.3383 REMARK 3 S31: 0.8853 S32: 0.1781 S33: 1.2322 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: (CHAIN A AND RESID 93:101) REMARK 3 ORIGIN FOR THE GROUP (A): -10.0752 -2.7719 -2.3028 REMARK 3 T TENSOR REMARK 3 T11: 0.0669 T22: 0.0615 REMARK 3 T33: 0.1686 T12: -0.0098 REMARK 3 T13: -0.0252 T23: 0.0203 REMARK 3 L TENSOR REMARK 3 L11: 2.3894 L22: 2.5608 REMARK 3 L33: 2.6898 L12: 1.9210 REMARK 3 L13: 2.2695 L23: 1.0931 REMARK 3 S TENSOR REMARK 3 S11: -0.0336 S12: -0.1768 S13: 0.0524 REMARK 3 S21: -0.0230 S22: 0.0137 S23: 0.5560 REMARK 3 S31: -0.0187 S32: -0.2789 S33: 1.0322 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: (CHAIN A AND RESID 102:114) REMARK 3 ORIGIN FOR THE GROUP (A): -1.9847 -4.8741 9.3745 REMARK 3 T TENSOR REMARK 3 T11: 0.0696 T22: 0.0613 REMARK 3 T33: 0.1765 T12: -0.0074 REMARK 3 T13: 0.0490 T23: 0.0182 REMARK 3 L TENSOR REMARK 3 L11: 3.8118 L22: 1.2641 REMARK 3 L33: 6.1428 L12: 0.5395 REMARK 3 L13: 1.5166 L23: 0.7052 REMARK 3 S TENSOR REMARK 3 S11: 0.2546 S12: -0.3599 S13: -0.5979 REMARK 3 S21: 0.2120 S22: 0.1451 S23: 0.0534 REMARK 3 S31: 0.6246 S32: 0.0451 S33: 6.1670 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: (CHAIN A AND RESID 115:120) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0836 -12.4397 6.5732 REMARK 3 T TENSOR REMARK 3 T11: 0.1489 T22: 0.1263 REMARK 3 T33: 0.1679 T12: 0.0396 REMARK 3 T13: 0.0150 T23: -0.0536 REMARK 3 L TENSOR REMARK 3 L11: 4.6885 L22: 2.5052 REMARK 3 L33: 7.4175 L12: -0.0328 REMARK 3 L13: 1.3454 L23: 0.8744 REMARK 3 S TENSOR REMARK 3 S11: 0.2133 S12: 0.1291 S13: -0.1935 REMARK 3 S21: 0.1221 S22: -0.1756 S23: 0.3219 REMARK 3 S31: 0.5498 S32: -0.0297 S33: -0.1219 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: (CHAIN A AND RESID 121:130) REMARK 3 ORIGIN FOR THE GROUP (A): 13.6125 -12.0238 14.0864 REMARK 3 T TENSOR REMARK 3 T11: 0.0872 T22: -0.0469 REMARK 3 T33: 0.1203 T12: 0.3214 REMARK 3 T13: -0.0393 T23: 0.0515 REMARK 3 L TENSOR REMARK 3 L11: 0.2362 L22: 0.4544 REMARK 3 L33: 0.0780 L12: -0.1582 REMARK 3 L13: 0.0959 L23: 0.0576 REMARK 3 S TENSOR REMARK 3 S11: -0.0298 S12: 0.0701 S13: -0.2946 REMARK 3 S21: 0.0806 S22: -0.0751 S23: -0.0516 REMARK 3 S31: 0.4344 S32: 0.3425 S33: -1.6175 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: (CHAIN A AND RESID 131:148) REMARK 3 ORIGIN FOR THE GROUP (A): 9.8757 1.4015 18.5450 REMARK 3 T TENSOR REMARK 3 T11: 0.1843 T22: 0.2108 REMARK 3 T33: 0.1068 T12: -0.0434 REMARK 3 T13: -0.0383 T23: -0.0142 REMARK 3 L TENSOR REMARK 3 L11: 1.5411 L22: 4.7959 REMARK 3 L33: 1.1280 L12: -0.4231 REMARK 3 L13: -0.2047 L23: -2.0202 REMARK 3 S TENSOR REMARK 3 S11: 0.0391 S12: -0.2985 S13: 0.1036 REMARK 3 S21: 0.9284 S22: -0.2941 S23: -0.3838 REMARK 3 S31: -0.5134 S32: 0.4180 S33: -0.9261 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GPR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074484. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 22-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.000 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19998 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : 8.200 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 45.6000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.61 REMARK 200 COMPLETENESS FOR SHELL (%) : 87.3 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.30900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX AUTOMR REMARK 200 STARTING MODEL: PDB ENTRY 2CP4 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.14 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: EHUBC5 AT 8 MG/ML CONCENTRATION IN REMARK 280 BUFFER CONTAINING 50 MM HEPES AND 100 MM NACL WAS MIXED 1:1 AND REMARK 280 EQUILIBRATED AGAINST CRYSTALLIZATION SOLUTION (100 MM TRIS, 14% REMARK 280 (W/V) POLYVINYLPYRROLIDONE K 15, AND 0.5 MM COBALT (II) CHLORIDE) REMARK 280 , PH 7.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 23.48650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 31.73200 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 24.78850 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 31.73200 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 23.48650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 24.78850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 447 O HOH A 463 1.90 REMARK 500 O HOH A 457 O HOH A 462 1.99 REMARK 500 OXT PRO A 148 O HOH A 473 1.99 REMARK 500 O HOH A 419 O HOH A 438 2.02 REMARK 500 O ASN A 114 O HOH A 341 2.05 REMARK 500 O HOH A 359 O HOH A 402 2.07 REMARK 500 O HOH A 362 O HOH A 407 2.08 REMARK 500 ND2 ASN A 114 O HOH A 459 2.13 REMARK 500 O HOH A 436 O HOH A 439 2.16 REMARK 500 O HOH A 360 O HOH A 401 2.17 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 128 NE - CZ - NH1 ANGL. DEV. = 3.6 DEGREES REMARK 500 ARG A 128 NE - CZ - NH2 ANGL. DEV. = -3.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 16 66.36 -156.28 REMARK 500 LYS A 90 -117.68 -128.60 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 CO A 201 CO REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLN A 15 OE1 REMARK 620 2 HIS A 32 NE2 51.2 REMARK 620 3 ASP A 53 OD1 50.8 7.5 REMARK 620 4 ASP A 53 OD2 52.1 8.3 1.4 REMARK 620 5 HIS A 55 NE2 47.0 5.4 5.4 6.9 REMARK 620 6 HOH A 305 O 52.9 2.4 6.2 6.7 6.1 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CO A 201 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GSW RELATED DB: PDB REMARK 900 RELATED ID: 4GU2 RELATED DB: PDB DBREF 4GPR A 1 148 UNP C4M5T2 C4M5T2_ENTHI 1 148 SEQADV 4GPR SER A -2 UNP C4M5T2 EXPRESSION TAG SEQADV 4GPR ALA A -1 UNP C4M5T2 EXPRESSION TAG SEQADV 4GPR ALA A 0 UNP C4M5T2 EXPRESSION TAG SEQRES 1 A 151 SER ALA ALA MET ALA MET ARG ARG ILE GLN LYS GLU LEU SEQRES 2 A 151 ARG GLU ILE GLN GLN ASP PRO PRO CYS ASN CYS SER ALA SEQRES 3 A 151 GLY PRO VAL GLY ASP ASP ILE PHE HIS TRP THR ALA THR SEQRES 4 A 151 ILE THR GLY PRO ASP ASP SER PRO TYR GLN GLY GLY LEU SEQRES 5 A 151 PHE PHE LEU ASP VAL HIS PHE PRO VAL ASP TYR PRO PHE SEQRES 6 A 151 LYS ALA PRO ARG VAL THR PHE MET THR LYS VAL TYR HIS SEQRES 7 A 151 PRO ASN ILE ASN LYS ASN GLY VAL ILE CYS LEU ASP ILE SEQRES 8 A 151 LEU LYS ASP GLN TRP SER PRO ALA LEU THR LEU SER ARG SEQRES 9 A 151 VAL LEU LEU SER ILE SER SER LEU LEU THR ASP PRO ASN SEQRES 10 A 151 PRO SER ASP PRO LEU ASP PRO GLU VAL ALA ASN VAL LEU SEQRES 11 A 151 ARG ALA ASN LYS LYS GLN PHE GLU ASP THR ALA ARG GLU SEQRES 12 A 151 TRP THR ARG MET TYR ALA ARG PRO HET CO A 201 1 HETNAM CO COBALT (II) ION FORMUL 2 CO CO 2+ FORMUL 3 HOH *179(H2 O) HELIX 1 1 ALA A -1 ASP A 16 1 18 HELIX 2 2 LEU A 86 LYS A 90 5 5 HELIX 3 3 THR A 98 ASP A 112 1 15 HELIX 4 4 ASP A 120 ASN A 130 1 11 HELIX 5 5 ASN A 130 ALA A 146 1 17 SHEET 1 A 4 CYS A 21 PRO A 25 0 SHEET 2 A 4 HIS A 32 THR A 38 -1 O THR A 36 N SER A 22 SHEET 3 A 4 LEU A 49 HIS A 55 -1 O LEU A 52 N ALA A 35 SHEET 4 A 4 ARG A 66 PHE A 69 -1 O THR A 68 N ASP A 53 LINK OE1 GLN A 15 CO CO A 201 1555 4455 2.16 LINK NE2 HIS A 32 CO CO A 201 1555 1555 2.11 LINK OD1 ASP A 53 CO CO A 201 1555 1555 2.20 LINK OD2 ASP A 53 CO CO A 201 1555 1555 2.23 LINK NE2 HIS A 55 CO CO A 201 1555 1555 2.16 LINK CO CO A 201 O HOH A 305 1555 1555 2.12 CISPEP 1 TYR A 60 PRO A 61 0 6.00 SITE 1 AC1 5 GLN A 15 HIS A 32 ASP A 53 HIS A 55 SITE 2 AC1 5 HOH A 305 CRYST1 46.973 49.577 63.464 90.00 90.00 90.00 P 21 21 21 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021289 0.000000 0.000000 0.00000 SCALE2 0.000000 0.020171 0.000000 0.00000 SCALE3 0.000000 0.000000 0.015757 0.00000