HEADER CHAPERONE 23-AUG-12 4GQT TITLE N-TERMINAL DOMAIN OF C. ELEGANS HSP90 COMPND MOL_ID: 1; COMPND 2 MOLECULE: HEAT SHOCK PROTEIN 90; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: N-TERMINAL DOMAIN; COMPND 5 SYNONYM: ABNORMAL DAUER FORMATION PROTEIN 21; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CAENORHABDITIS ELEGANS; SOURCE 3 ORGANISM_COMMON: NEMATODE; SOURCE 4 ORGANISM_TAXID: 6239; SOURCE 5 GENE: C47E8.5, DAF-21; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PMCSG7 KEYWDS STRUCTURAL GENOMICS, APC102132, HSP90, CHAPERONE, ADP, PSI-BIOLOGY, KEYWDS 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS, MCSG EXPDTA X-RAY DIFFRACTION AUTHOR J.OSIPIUK,G.CHHOR,M.GU,P.VAN OOSTEN-HAWLE,R.I.MORIMOTO,A.JOACHIMIAK, AUTHOR 2 MIDWEST CENTER FOR STRUCTURAL GENOMICS (MCSG) REVDAT 3 13-SEP-23 4GQT 1 REMARK SEQADV LINK REVDAT 2 15-NOV-17 4GQT 1 REMARK REVDAT 1 05-SEP-12 4GQT 0 JRNL AUTH J.OSIPIUK,G.CHHOR,M.GU,P.VAN OOSTEN-HAWLE,R.I.MORIMOTO, JRNL AUTH 2 A.JOACHIMIAK JRNL TITL N-TERMINAL DOMAIN OF C. ELEGANS HSP90 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.15 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.15 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.30 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 3 NUMBER OF REFLECTIONS : 24670 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.197 REMARK 3 R VALUE (WORKING SET) : 0.194 REMARK 3 FREE R VALUE : 0.252 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1251 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.15 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.20 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1496 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 93.51 REMARK 3 BIN R VALUE (WORKING SET) : 0.2410 REMARK 3 BIN FREE R VALUE SET COUNT : 90 REMARK 3 BIN FREE R VALUE : 0.3120 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3282 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 64 REMARK 3 SOLVENT ATOMS : 175 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 40.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 35.24 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.39000 REMARK 3 B22 (A**2) : -0.75000 REMARK 3 B33 (A**2) : 0.35000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.267 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.216 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.159 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.230 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.963 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.939 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3453 ; 0.016 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4676 ; 1.873 ; 1.984 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 432 ; 6.419 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 157 ;35.658 ;25.669 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 644 ;17.167 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;21.276 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 532 ; 0.114 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2539 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A -10 A 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 19.4407 15.8934 14.8505 REMARK 3 T TENSOR REMARK 3 T11: 0.0608 T22: 0.0583 REMARK 3 T33: 0.0289 T12: 0.0242 REMARK 3 T13: 0.0204 T23: 0.0163 REMARK 3 L TENSOR REMARK 3 L11: 1.3816 L22: 0.6105 REMARK 3 L33: 1.4840 L12: 0.7432 REMARK 3 L13: 0.1542 L23: -0.2462 REMARK 3 S TENSOR REMARK 3 S11: 0.0306 S12: -0.0024 S13: -0.0518 REMARK 3 S21: -0.0334 S22: 0.0693 S23: -0.0205 REMARK 3 S31: 0.0213 S32: -0.0795 S33: -0.0999 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B -10 B 9999 REMARK 3 ORIGIN FOR THE GROUP (A): 14.5153 16.1866 49.2512 REMARK 3 T TENSOR REMARK 3 T11: 0.0475 T22: 0.0355 REMARK 3 T33: 0.0452 T12: -0.0275 REMARK 3 T13: 0.0330 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.4736 L22: 1.0843 REMARK 3 L33: 0.5962 L12: -0.2095 REMARK 3 L13: 0.1725 L23: -0.1840 REMARK 3 S TENSOR REMARK 3 S11: 0.0180 S12: -0.0145 S13: -0.0697 REMARK 3 S21: -0.0066 S22: 0.0288 S23: -0.0270 REMARK 3 S31: -0.0603 S32: 0.0340 S33: -0.0468 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES : WITH TLS ADDED REMARK 4 REMARK 4 4GQT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 24-AUG-12. REMARK 100 THE DEPOSITION ID IS D_1000074522. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 05-JUL-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 19-BM REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-3000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-3000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 24707 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.150 REMARK 200 RESOLUTION RANGE LOW (A) : 43.300 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 200 DATA REDUNDANCY : 7.000 REMARK 200 R MERGE (I) : 0.10400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 7.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.15 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.19 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : 6.90 REMARK 200 R MERGE FOR SHELL (I) : 0.83500 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.180 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP, HKL-3000 REMARK 200 STARTING MODEL: PDB ENTRY 2JJC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.42 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.17 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.08 M ZINC ACETATE, 19% PEG-3350, REMARK 280 0.01 M ADP, PH 7.5, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE REMARK 280 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 19.82600 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 64.33500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.32900 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 64.33500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 19.82600 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.32900 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3160 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 19030 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -296.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A -2 REMARK 465 ASN A -1 REMARK 465 ALA A 0 REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 LYS A 212 REMARK 465 GLU A 213 REMARK 465 ARG A 214 REMARK 465 GLU A 215 REMARK 465 LYS A 216 REMARK 465 GLU A 217 REMARK 465 VAL A 218 REMARK 465 GLU A 219 REMARK 465 ASP A 220 REMARK 465 GLU A 221 REMARK 465 GLU A 222 REMARK 465 ALA A 223 REMARK 465 VAL A 224 REMARK 465 SER B -2 REMARK 465 ASN B -1 REMARK 465 ALA B 0 REMARK 465 MET B 1 REMARK 465 SER B 2 REMARK 465 LYS B 212 REMARK 465 GLU B 213 REMARK 465 ARG B 214 REMARK 465 GLU B 215 REMARK 465 LYS B 216 REMARK 465 GLU B 217 REMARK 465 VAL B 218 REMARK 465 GLU B 219 REMARK 465 ASP B 220 REMARK 465 GLU B 221 REMARK 465 GLU B 222 REMARK 465 ALA B 223 REMARK 465 VAL B 224 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OD2 ASP B 146 O HOH B 680 2.10 REMARK 500 O HOH A 685 O HOH B 640 2.10 REMARK 500 O HOH A 622 O HOH A 674 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 177 CG HIS A 177 CD2 0.074 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 28 41.72 -104.64 REMARK 500 ALA A 154 -138.37 56.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 30 OE2 REMARK 620 2 HIS A 198 NE2 84.5 REMARK 620 3 HOH A 660 O 87.2 79.6 REMARK 620 4 HOH A 661 O 110.1 123.6 151.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN A 39 ND2 REMARK 620 2 ADP A 500 O1A 93.2 REMARK 620 3 ADP A 500 O1B 94.1 88.3 REMARK 620 4 HOH A 632 O 85.1 177.4 93.8 REMARK 620 5 HOH A 633 O 90.2 83.9 171.3 94.1 REMARK 620 6 HOH A 634 O 173.3 86.3 92.6 95.1 83.1 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 74 OE2 REMARK 620 2 HIS B 177 ND1 94.3 REMARK 620 3 HOH B 627 O 107.3 111.4 REMARK 620 4 HOH B 634 O 122.5 122.5 98.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 504 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 144 OD1 REMARK 620 2 HOH A 649 O 85.9 REMARK 620 3 HOH A 671 O 93.1 170.3 REMARK 620 4 HOH A 692 O 84.4 90.0 99.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 505 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 145 OD1 REMARK 620 2 HOH A 689 O 87.7 REMARK 620 3 HOH A 690 O 86.5 104.9 REMARK 620 4 HOH A 693 O 92.0 86.9 167.9 REMARK 620 5 HOH A 694 O 90.0 177.7 75.0 93.1 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 502 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 177 ND1 REMARK 620 2 HOH A 629 O 106.1 REMARK 620 3 HOH A 654 O 105.8 95.5 REMARK 620 4 GLU B 74 OE1 91.6 104.6 148.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 507 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 184 OD2 REMARK 620 2 HOH A 650 O 163.6 REMARK 620 3 HOH A 651 O 106.1 89.4 REMARK 620 4 HOH A 691 O 87.5 77.1 166.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 506 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU A 193 OE1 REMARK 620 2 HOH A 626 O 78.4 REMARK 620 3 HOH A 652 O 136.2 99.5 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 503 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 30 OE2 REMARK 620 2 HIS B 198 NE2 85.1 REMARK 620 3 HOH B 631 O 111.2 102.8 REMARK 620 4 HOH B 642 O 174.8 92.2 73.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 501 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASN B 39 OD1 REMARK 620 2 ADP B 500 O1B 91.1 REMARK 620 3 ADP B 500 O1A 92.3 87.3 REMARK 620 4 HOH B 645 O 174.2 94.3 90.1 REMARK 620 5 HOH B 646 O 91.6 173.1 86.2 83.3 REMARK 620 6 HOH B 647 O 89.8 96.4 175.7 87.5 90.0 REMARK 620 N 1 2 3 4 5 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP B 500 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 503 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: MCSG-APC102132 RELATED DB: TARGETTRACK DBREF 4GQT A 1 224 UNP Q18688 HSP90_CAEEL 1 224 DBREF 4GQT B 1 224 UNP Q18688 HSP90_CAEEL 1 224 SEQADV 4GQT SER A -2 UNP Q18688 EXPRESSION TAG SEQADV 4GQT ASN A -1 UNP Q18688 EXPRESSION TAG SEQADV 4GQT ALA A 0 UNP Q18688 EXPRESSION TAG SEQADV 4GQT SER B -2 UNP Q18688 EXPRESSION TAG SEQADV 4GQT ASN B -1 UNP Q18688 EXPRESSION TAG SEQADV 4GQT ALA B 0 UNP Q18688 EXPRESSION TAG SEQRES 1 A 227 SER ASN ALA MET SER GLU ASN ALA GLU THR PHE ALA PHE SEQRES 2 A 227 GLN ALA GLU ILE ALA GLN LEU MET SER LEU ILE ILE ASN SEQRES 3 A 227 THR PHE TYR SER ASN LYS GLU ILE TYR LEU ARG GLU LEU SEQRES 4 A 227 ILE SER ASN ALA SER ASP ALA LEU ASP LYS ILE ARG TYR SEQRES 5 A 227 GLN ALA LEU THR GLU PRO SER GLU LEU ASP THR GLY LYS SEQRES 6 A 227 GLU LEU PHE ILE LYS ILE THR PRO ASN LYS GLU GLU LYS SEQRES 7 A 227 THR LEU THR ILE MET ASP THR GLY ILE GLY MET THR LYS SEQRES 8 A 227 ALA ASP LEU VAL ASN ASN LEU GLY THR ILE ALA LYS SER SEQRES 9 A 227 GLY THR LYS ALA PHE MET GLU ALA LEU GLN ALA GLY ALA SEQRES 10 A 227 ASP ILE SER MET ILE GLY GLN PHE GLY VAL GLY PHE TYR SEQRES 11 A 227 SER ALA PHE LEU VAL ALA ASP LYS VAL VAL VAL THR SER SEQRES 12 A 227 LYS ASN ASN ASP ASP ASP SER TYR GLN TRP GLU SER SER SEQRES 13 A 227 ALA GLY GLY SER PHE VAL VAL ARG PRO PHE ASN ASP PRO SEQRES 14 A 227 GLU VAL THR ARG GLY THR LYS ILE VAL MET HIS ILE LYS SEQRES 15 A 227 GLU ASP GLN ILE ASP PHE LEU GLU GLU ARG LYS ILE LYS SEQRES 16 A 227 GLU ILE VAL LYS LYS HIS SER GLN PHE ILE GLY TYR PRO SEQRES 17 A 227 ILE LYS LEU VAL VAL GLU LYS GLU ARG GLU LYS GLU VAL SEQRES 18 A 227 GLU ASP GLU GLU ALA VAL SEQRES 1 B 227 SER ASN ALA MET SER GLU ASN ALA GLU THR PHE ALA PHE SEQRES 2 B 227 GLN ALA GLU ILE ALA GLN LEU MET SER LEU ILE ILE ASN SEQRES 3 B 227 THR PHE TYR SER ASN LYS GLU ILE TYR LEU ARG GLU LEU SEQRES 4 B 227 ILE SER ASN ALA SER ASP ALA LEU ASP LYS ILE ARG TYR SEQRES 5 B 227 GLN ALA LEU THR GLU PRO SER GLU LEU ASP THR GLY LYS SEQRES 6 B 227 GLU LEU PHE ILE LYS ILE THR PRO ASN LYS GLU GLU LYS SEQRES 7 B 227 THR LEU THR ILE MET ASP THR GLY ILE GLY MET THR LYS SEQRES 8 B 227 ALA ASP LEU VAL ASN ASN LEU GLY THR ILE ALA LYS SER SEQRES 9 B 227 GLY THR LYS ALA PHE MET GLU ALA LEU GLN ALA GLY ALA SEQRES 10 B 227 ASP ILE SER MET ILE GLY GLN PHE GLY VAL GLY PHE TYR SEQRES 11 B 227 SER ALA PHE LEU VAL ALA ASP LYS VAL VAL VAL THR SER SEQRES 12 B 227 LYS ASN ASN ASP ASP ASP SER TYR GLN TRP GLU SER SER SEQRES 13 B 227 ALA GLY GLY SER PHE VAL VAL ARG PRO PHE ASN ASP PRO SEQRES 14 B 227 GLU VAL THR ARG GLY THR LYS ILE VAL MET HIS ILE LYS SEQRES 15 B 227 GLU ASP GLN ILE ASP PHE LEU GLU GLU ARG LYS ILE LYS SEQRES 16 B 227 GLU ILE VAL LYS LYS HIS SER GLN PHE ILE GLY TYR PRO SEQRES 17 B 227 ILE LYS LEU VAL VAL GLU LYS GLU ARG GLU LYS GLU VAL SEQRES 18 B 227 GLU ASP GLU GLU ALA VAL HET ADP A 500 27 HET ZN A 501 1 HET ZN A 502 1 HET ZN A 503 1 HET ZN A 504 1 HET ZN A 505 1 HET ZN A 506 1 HET ZN A 507 1 HET ADP B 500 27 HET ZN B 501 1 HET ZN B 502 1 HET ZN B 503 1 HETNAM ADP ADENOSINE-5'-DIPHOSPHATE HETNAM ZN ZINC ION FORMUL 3 ADP 2(C10 H15 N5 O10 P2) FORMUL 4 ZN 10(ZN 2+) FORMUL 15 HOH *175(H2 O) HELIX 1 1 GLN A 11 THR A 24 1 14 HELIX 2 2 GLU A 30 LEU A 52 1 23 HELIX 3 3 THR A 53 GLY A 61 5 9 HELIX 4 4 THR A 87 LEU A 95 1 9 HELIX 5 5 GLY A 102 ALA A 112 1 11 HELIX 6 6 ASP A 115 GLY A 123 5 9 HELIX 7 7 VAL A 124 LEU A 131 5 8 HELIX 8 8 GLU A 180 LEU A 186 5 7 HELIX 9 9 GLU A 187 SER A 199 1 13 HELIX 10 10 GLN B 11 THR B 24 1 14 HELIX 11 11 GLU B 30 LEU B 52 1 23 HELIX 12 12 THR B 53 GLY B 61 5 9 HELIX 13 13 THR B 87 LEU B 95 1 9 HELIX 14 14 GLY B 102 ALA B 112 1 11 HELIX 15 15 ASP B 115 GLY B 123 5 9 HELIX 16 16 VAL B 124 LEU B 131 5 8 HELIX 17 17 GLU B 180 LEU B 186 5 7 HELIX 18 18 GLU B 187 SER B 199 1 13 SHEET 1 A 8 GLU A 6 ALA A 9 0 SHEET 2 A 8 SER A 157 PRO A 162 -1 O PHE A 158 N PHE A 8 SHEET 3 A 8 TYR A 148 SER A 152 -1 N GLN A 149 O ARG A 161 SHEET 4 A 8 ALA A 133 LYS A 141 -1 N VAL A 138 O TRP A 150 SHEET 5 A 8 GLY A 171 ILE A 178 -1 O VAL A 175 N VAL A 137 SHEET 6 A 8 THR A 76 ASP A 81 -1 N LEU A 77 O MET A 176 SHEET 7 A 8 ILE A 66 ASN A 71 -1 N THR A 69 O THR A 78 SHEET 8 A 8 ILE A 206 LEU A 208 1 O LYS A 207 N ILE A 68 SHEET 1 B 8 GLU B 6 ALA B 9 0 SHEET 2 B 8 SER B 157 PRO B 162 -1 O PHE B 158 N PHE B 8 SHEET 3 B 8 TYR B 148 SER B 152 -1 N GLN B 149 O ARG B 161 SHEET 4 B 8 ALA B 133 LYS B 141 -1 N VAL B 138 O TRP B 150 SHEET 5 B 8 GLY B 171 ILE B 178 -1 O VAL B 175 N VAL B 137 SHEET 6 B 8 THR B 76 ASP B 81 -1 N LEU B 77 O MET B 176 SHEET 7 B 8 ILE B 66 ASN B 71 -1 N LYS B 67 O MET B 80 SHEET 8 B 8 ILE B 206 LEU B 208 1 O LYS B 207 N ILE B 66 LINK OE2 GLU A 30 ZN ZN A 503 1555 1555 2.29 LINK ND2 ASN A 39 ZN ZN A 501 1555 1555 2.05 LINK OE2 GLU A 74 ZN ZN B 502 1555 1555 1.89 LINK OD1 ASP A 144 ZN ZN A 504 1555 1555 2.14 LINK OD1 ASP A 145 ZN ZN A 505 1555 1555 2.35 LINK ND1 HIS A 177 ZN ZN A 502 1555 1555 2.06 LINK OD2 ASP A 184 ZN ZN A 507 1555 1555 2.15 LINK OE1 GLU A 193 ZN ZN A 506 1555 1555 2.43 LINK NE2 HIS A 198 ZN ZN A 503 1555 1555 2.31 LINK O1A ADP A 500 ZN ZN A 501 1555 1555 1.87 LINK O1B ADP A 500 ZN ZN A 501 1555 1555 2.05 LINK ZN ZN A 501 O HOH A 632 1555 1555 2.12 LINK ZN ZN A 501 O HOH A 633 1555 1555 2.08 LINK ZN ZN A 501 O HOH A 634 1555 1555 2.42 LINK ZN ZN A 502 O HOH A 629 1555 1555 2.14 LINK ZN ZN A 502 O HOH A 654 1555 1555 1.80 LINK ZN ZN A 502 OE1 GLU B 74 1555 1555 1.76 LINK ZN ZN A 503 O HOH A 660 1555 1555 2.23 LINK ZN ZN A 503 O HOH A 661 1555 1555 2.18 LINK ZN ZN A 504 O HOH A 649 1555 1555 2.30 LINK ZN ZN A 504 O HOH A 671 1555 1555 2.21 LINK ZN ZN A 504 O HOH A 692 1555 1555 2.40 LINK ZN ZN A 505 O HOH A 689 1555 1555 2.03 LINK ZN ZN A 505 O HOH A 690 1555 1555 1.91 LINK ZN ZN A 505 O HOH A 693 1555 1555 2.41 LINK ZN ZN A 505 O HOH A 694 1555 1555 2.29 LINK ZN ZN A 506 O HOH A 626 1555 1555 2.00 LINK ZN ZN A 506 O HOH A 652 1555 1555 1.99 LINK ZN ZN A 507 O HOH A 650 1555 1555 1.90 LINK ZN ZN A 507 O HOH A 651 1555 1555 1.98 LINK ZN ZN A 507 O HOH A 691 1555 1555 2.36 LINK OE2 GLU B 30 ZN ZN B 503 1555 1555 2.19 LINK OD1 ASN B 39 ZN ZN B 501 1555 1555 2.05 LINK ND1 HIS B 177 ZN ZN B 502 1555 1555 2.14 LINK NE2 HIS B 198 ZN ZN B 503 1555 1555 2.27 LINK O1B ADP B 500 ZN ZN B 501 1555 1555 1.96 LINK O1A ADP B 500 ZN ZN B 501 1555 1555 2.06 LINK ZN ZN B 501 O HOH B 645 1555 1555 2.32 LINK ZN ZN B 501 O HOH B 646 1555 1555 2.08 LINK ZN ZN B 501 O HOH B 647 1555 1555 1.91 LINK ZN ZN B 502 O HOH B 627 1555 1555 2.02 LINK ZN ZN B 502 O HOH B 634 1555 1555 2.12 LINK ZN ZN B 503 O HOH B 631 1555 1555 2.20 LINK ZN ZN B 503 O HOH B 642 1555 1555 1.97 SITE 1 AC1 21 ASN A 39 ALA A 43 ASP A 81 MET A 86 SITE 2 AC1 21 ASN A 94 LEU A 95 GLY A 123 VAL A 124 SITE 3 AC1 21 GLY A 125 PHE A 126 THR A 172 ZN A 501 SITE 4 AC1 21 HOH A 601 HOH A 604 HOH A 607 HOH A 608 SITE 5 AC1 21 HOH A 632 HOH A 633 HOH A 634 HOH A 644 SITE 6 AC1 21 HOH A 648 SITE 1 AC2 5 ASN A 39 ADP A 500 HOH A 632 HOH A 633 SITE 2 AC2 5 HOH A 634 SITE 1 AC3 4 HIS A 177 HOH A 629 HOH A 654 GLU B 74 SITE 1 AC4 4 GLU A 30 HIS A 198 HOH A 660 HOH A 661 SITE 1 AC5 4 ASP A 144 HOH A 649 HOH A 671 HOH A 692 SITE 1 AC6 5 ASP A 145 HOH A 689 HOH A 690 HOH A 693 SITE 2 AC6 5 HOH A 694 SITE 1 AC7 5 ARG A 189 GLU A 193 HOH A 626 HOH A 652 SITE 2 AC7 5 ASP B 144 SITE 1 AC8 5 ASP A 184 HOH A 650 HOH A 651 HOH A 691 SITE 2 AC8 5 ASP B 145 SITE 1 AC9 19 ASN B 39 ALA B 43 ASP B 81 MET B 86 SITE 2 AC9 19 LEU B 95 GLY B 123 VAL B 124 GLY B 125 SITE 3 AC9 19 PHE B 126 THR B 172 ZN B 501 HOH B 601 SITE 4 AC9 19 HOH B 603 HOH B 609 HOH B 644 HOH B 645 SITE 5 AC9 19 HOH B 646 HOH B 647 HOH B 674 SITE 1 BC1 5 ASN B 39 ADP B 500 HOH B 645 HOH B 646 SITE 2 BC1 5 HOH B 647 SITE 1 BC2 4 GLU A 74 HIS B 177 HOH B 627 HOH B 634 SITE 1 BC3 5 GLU A 54 GLU B 30 HIS B 198 HOH B 631 SITE 2 BC3 5 HOH B 642 CRYST1 39.652 86.658 128.670 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.025219 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011540 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007772 0.00000