HEADER HYDROLASE 30-AUG-12 4GVJ
TITLE TYK2 (JH1) IN COMPLEX WITH ADENOSINE DI-PHOSPHATE
COMPND MOL_ID: 1;
COMPND 2 MOLECULE: NON-RECEPTOR TYROSINE-PROTEIN KINASE TYK2;
COMPND 3 CHAIN: A;
COMPND 4 FRAGMENT: KINASE DOMAIN, UNP RESIDUES 885-1176;
COMPND 5 EC: 2.7.10.2;
COMPND 6 ENGINEERED: YES;
COMPND 7 MUTATION: YES
SOURCE MOL_ID: 1;
SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS;
SOURCE 3 ORGANISM_COMMON: HUMAN;
SOURCE 4 ORGANISM_TAXID: 9606;
SOURCE 5 GENE: TYK2;
SOURCE 6 EXPRESSION_SYSTEM: SPODOPTERA FRUGIPERDA;
SOURCE 7 EXPRESSION_SYSTEM_COMMON: FALL ARMYWORM;
SOURCE 8 EXPRESSION_SYSTEM_TAXID: 7108;
SOURCE 9 EXPRESSION_SYSTEM_CELL_LINE: TNI;
SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: BACULOVIRUS
KEYWDS KINASE, HYDROLASE
EXPDTA X-RAY DIFFRACTION
AUTHOR J.LIANG,A.V.ABBEMA,L.BAO,K.BARRETT,M.BERESINI,L.BEREZHKOVSKIY,
AUTHOR 2 W.BLAIR,C.CHANG,J.DRISCOLL,C.EIGENBROT,N.GHILARDI,P.GIBBONS,
AUTHOR 3 J.HALLADAY,A.JOHNSON,P.B.KOHLI,Y.LAI,M.LIIMATTA,P.MANTIK,
AUTHOR 4 K.MENGHRAJANI,J.MURRAY,A.SAMBRONE,Y.SHAO,S.SHIA,Y.SHIN,J.SMITH,
AUTHOR 5 S.SOHN,M.STANLEY,V.TSUI,M.ULTSCH,L.WU,B.ZHANG,S.MAGNUSON
REVDAT 3 13-SEP-23 4GVJ 1 REMARK SEQADV LINK
REVDAT 2 08-JUN-16 4GVJ 1 HEADER
REVDAT 1 14-AUG-13 4GVJ 0
JRNL AUTH J.LIANG,V.TSUI,A.VAN ABBEMA,L.BAO,K.BARRETT,M.BERESINI,
JRNL AUTH 2 L.BEREZHKOVSKIY,W.S.BLAIR,C.CHANG,J.DRISCOLL,C.EIGENBROT,
JRNL AUTH 3 N.GHILARDI,P.GIBBONS,J.HALLADAY,A.JOHNSON,P.B.KOHLI,Y.LAI,
JRNL AUTH 4 M.LIIMATTA,P.MANTIK,K.MENGHRAJANI,J.MURRAY,A.SAMBRONE,
JRNL AUTH 5 Y.XIAO,S.SHIA,Y.SHIN,J.SMITH,S.SOHN,M.STANLEY,M.ULTSCH,
JRNL AUTH 6 B.ZHANG,L.C.WU,S.MAGNUSON
JRNL TITL LEAD IDENTIFICATION OF NOVEL AND SELECTIVE TYK2 INHIBITORS.
JRNL REF EUR.J.MED.CHEM. V. 67 175 2013
JRNL REFN ISSN 0223-5234
JRNL PMID 23867602
JRNL DOI 10.1016/J.EJMECH.2013.03.070
REMARK 2
REMARK 2 RESOLUTION. 2.03 ANGSTROMS.
REMARK 3
REMARK 3 REFINEMENT.
REMARK 3 PROGRAM : BUSTER 2.11.2
REMARK 3 AUTHORS : BRICOGNE,BLANC,BRANDL,FLENSBURG,KELLER,
REMARK 3 : PACIOREK,ROVERSI,SHARFF,SMART,VONRHEIN,
REMARK 3 : WOMACK,MATTHEWS,TEN EYCK,TRONRUD
REMARK 3
REMARK 3 DATA USED IN REFINEMENT.
REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03
REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.93
REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000
REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 3 NUMBER OF REFLECTIONS : 19030
REMARK 3
REMARK 3 FIT TO DATA USED IN REFINEMENT.
REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT
REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM
REMARK 3 R VALUE (WORKING + TEST SET) : 0.190
REMARK 3 R VALUE (WORKING SET) : 0.188
REMARK 3 FREE R VALUE : 0.231
REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.410
REMARK 3 FREE R VALUE TEST SET COUNT : 1030
REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL
REMARK 3
REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN.
REMARK 3 TOTAL NUMBER OF BINS USED : 10
REMARK 3 BIN RESOLUTION RANGE HIGH (ANGSTROMS) : 2.03
REMARK 3 BIN RESOLUTION RANGE LOW (ANGSTROMS) : 2.14
REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.86
REMARK 3 REFLECTIONS IN BIN (WORKING + TEST SET) : 2703
REMARK 3 BIN R VALUE (WORKING + TEST SET) : 0.2192
REMARK 3 REFLECTIONS IN BIN (WORKING SET) : 2549
REMARK 3 BIN R VALUE (WORKING SET) : 0.2173
REMARK 3 BIN FREE R VALUE : 0.2482
REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : 5.70
REMARK 3 BIN FREE R VALUE TEST SET COUNT : 154
REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL
REMARK 3
REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT.
REMARK 3 PROTEIN ATOMS : 2352
REMARK 3 NUCLEIC ACID ATOMS : 0
REMARK 3 HETEROGEN ATOMS : 29
REMARK 3 SOLVENT ATOMS : 89
REMARK 3
REMARK 3 B VALUES.
REMARK 3 FROM WILSON PLOT (A**2) : 36.44
REMARK 3 MEAN B VALUE (OVERALL, A**2) : 46.56
REMARK 3 OVERALL ANISOTROPIC B VALUE.
REMARK 3 B11 (A**2) : -10.98220
REMARK 3 B22 (A**2) : 4.83980
REMARK 3 B33 (A**2) : 6.14240
REMARK 3 B12 (A**2) : 0.00000
REMARK 3 B13 (A**2) : 0.00000
REMARK 3 B23 (A**2) : 0.00000
REMARK 3
REMARK 3 ESTIMATED COORDINATE ERROR.
REMARK 3 ESD FROM LUZZATI PLOT (A) : 0.274
REMARK 3 DPI (BLOW EQ-10) BASED ON R VALUE (A) : NULL
REMARK 3 DPI (BLOW EQ-9) BASED ON FREE R VALUE (A) : NULL
REMARK 3 DPI (CRUICKSHANK) BASED ON R VALUE (A) : 0.197
REMARK 3 DPI (CRUICKSHANK) BASED ON FREE R VALUE (A) : NULL
REMARK 3
REMARK 3 REFERENCES: BLOW, D. (2002) ACTA CRYST D58, 792-797
REMARK 3 CRUICKSHANK, D.W.J. (1999) ACTA CRYST D55, 583-601
REMARK 3
REMARK 3 CORRELATION COEFFICIENTS.
REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.949
REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.934
REMARK 3
REMARK 3 NUMBER OF GEOMETRIC FUNCTION TERMS DEFINED : 15
REMARK 3 TERM COUNT WEIGHT FUNCTION.
REMARK 3 BOND LENGTHS : 2449 ; 2.000 ; HARMONIC
REMARK 3 BOND ANGLES : 3323 ; 2.000 ; HARMONIC
REMARK 3 TORSION ANGLES : 847 ; 2.000 ; SINUSOIDAL
REMARK 3 TRIGONAL CARBON PLANES : 53 ; 2.000 ; HARMONIC
REMARK 3 GENERAL PLANES : 371 ; 5.000 ; HARMONIC
REMARK 3 ISOTROPIC THERMAL FACTORS : 2449 ; 20.000 ; HARMONIC
REMARK 3 BAD NON-BONDED CONTACTS : 2 ; 5.000 ; SEMIHARMONIC
REMARK 3 IMPROPER TORSIONS : NULL ; NULL ; NULL
REMARK 3 PSEUDOROTATION ANGLES : NULL ; NULL ; NULL
REMARK 3 CHIRAL IMPROPER TORSION : 299 ; 5.000 ; SEMIHARMONIC
REMARK 3 SUM OF OCCUPANCIES : NULL ; NULL ; NULL
REMARK 3 UTILITY DISTANCES : NULL ; NULL ; NULL
REMARK 3 UTILITY ANGLES : NULL ; NULL ; NULL
REMARK 3 UTILITY TORSION : NULL ; NULL ; NULL
REMARK 3 IDEAL-DIST CONTACT TERM : 2799 ; 4.000 ; SEMIHARMONIC
REMARK 3
REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES.
REMARK 3 BOND LENGTHS (A) : 0.010
REMARK 3 BOND ANGLES (DEGREES) : 1.04
REMARK 3 PEPTIDE OMEGA TORSION ANGLES (DEGREES) : 3.08
REMARK 3 OTHER TORSION ANGLES (DEGREES) : 20.03
REMARK 3
REMARK 3 TLS DETAILS
REMARK 3 NUMBER OF TLS GROUPS : 4
REMARK 3
REMARK 3 TLS GROUP : 1
REMARK 3 SELECTION: { A|890 - A|916 }
REMARK 3 ORIGIN FOR THE GROUP (A): 3.8260 17.0454 -8.8231
REMARK 3 T TENSOR
REMARK 3 T11: 0.0232 T22: -0.1432
REMARK 3 T33: -0.0887 T12: 0.0088
REMARK 3 T13: 0.0412 T23: 0.0060
REMARK 3 L TENSOR
REMARK 3 L11: 4.4770 L22: 0.6202
REMARK 3 L33: 4.8451 L12: -1.2227
REMARK 3 L13: 0.0432 L23: 1.6597
REMARK 3 S TENSOR
REMARK 3 S11: 0.0150 S12: -0.2394 S13: 0.0090
REMARK 3 S21: 0.1239 S22: 0.0804 S23: 0.3137
REMARK 3 S31: -0.1926 S32: -0.1593 S33: -0.0954
REMARK 3
REMARK 3 TLS GROUP : 2
REMARK 3 SELECTION: { A|917 - A|1017 }
REMARK 3 ORIGIN FOR THE GROUP (A): 11.9964 7.6641 -11.6438
REMARK 3 T TENSOR
REMARK 3 T11: -0.0298 T22: -0.0791
REMARK 3 T33: -0.0663 T12: -0.0328
REMARK 3 T13: -0.0208 T23: -0.0194
REMARK 3 L TENSOR
REMARK 3 L11: 0.8877 L22: 2.2614
REMARK 3 L33: 1.8203 L12: -0.4318
REMARK 3 L13: -0.2793 L23: 0.4270
REMARK 3 S TENSOR
REMARK 3 S11: 0.0413 S12: -0.2190 S13: 0.1114
REMARK 3 S21: 0.4145 S22: 0.0507 S23: -0.2220
REMARK 3 S31: -0.3073 S32: 0.0170 S33: -0.0920
REMARK 3
REMARK 3 TLS GROUP : 3
REMARK 3 SELECTION: { A|1018 - A|1076 }
REMARK 3 ORIGIN FOR THE GROUP (A): 10.7767 -6.9338 -11.9110
REMARK 3 T TENSOR
REMARK 3 T11: -0.0711 T22: -0.0413
REMARK 3 T33: -0.0821 T12: 0.0063
REMARK 3 T13: -0.0071 T23: 0.0225
REMARK 3 L TENSOR
REMARK 3 L11: 2.8754 L22: 5.0536
REMARK 3 L33: 1.7769 L12: -0.0878
REMARK 3 L13: 0.0663 L23: 0.4127
REMARK 3 S TENSOR
REMARK 3 S11: -0.0465 S12: -0.3432 S13: -0.2683
REMARK 3 S21: 0.5287 S22: 0.0856 S23: -0.1059
REMARK 3 S31: 0.0576 S32: -0.0891 S33: -0.0391
REMARK 3
REMARK 3 TLS GROUP : 4
REMARK 3 SELECTION: { A|1077 - A|1177 }
REMARK 3 ORIGIN FOR THE GROUP (A): 13.0804 -12.1303 -24.7976
REMARK 3 T TENSOR
REMARK 3 T11: -0.1190 T22: -0.0815
REMARK 3 T33: -0.0310 T12: 0.0183
REMARK 3 T13: 0.0094 T23: -0.0207
REMARK 3 L TENSOR
REMARK 3 L11: 2.5855 L22: 2.4192
REMARK 3 L33: 0.7510 L12: -0.7564
REMARK 3 L13: 0.0561 L23: -0.4078
REMARK 3 S TENSOR
REMARK 3 S11: 0.0247 S12: 0.1388 S13: -0.2056
REMARK 3 S21: -0.0879 S22: -0.0723 S23: -0.1706
REMARK 3 S31: 0.0786 S32: 0.0306 S33: 0.0476
REMARK 3
REMARK 3 OTHER REFINEMENT REMARKS: NULL
REMARK 4
REMARK 4 4GVJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11
REMARK 100
REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 18-SEP-12.
REMARK 100 THE DEPOSITION ID IS D_1000074685.
REMARK 200
REMARK 200 EXPERIMENTAL DETAILS
REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION
REMARK 200 DATE OF DATA COLLECTION : 16-OCT-11
REMARK 200 TEMPERATURE (KELVIN) : 100
REMARK 200 PH : 6.5
REMARK 200 NUMBER OF CRYSTALS USED : 1
REMARK 200
REMARK 200 SYNCHROTRON (Y/N) : Y
REMARK 200 RADIATION SOURCE : APS
REMARK 200 BEAMLINE : 21-ID-F
REMARK 200 X-RAY GENERATOR MODEL : NULL
REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M
REMARK 200 WAVELENGTH OR RANGE (A) : 0.97
REMARK 200 MONOCHROMATOR : NULL
REMARK 200 OPTICS : MIRRORS- BERYLLIUM LENSES
REMARK 200
REMARK 200 DETECTOR TYPE : CCD
REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD
REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO
REMARK 200 DATA SCALING SOFTWARE : SCALEPACK
REMARK 200
REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19030
REMARK 200 RESOLUTION RANGE HIGH (A) : 2.030
REMARK 200 RESOLUTION RANGE LOW (A) : 50.000
REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000
REMARK 200
REMARK 200 OVERALL.
REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9
REMARK 200 DATA REDUNDANCY : 6.000
REMARK 200 R MERGE (I) : NULL
REMARK 200 R SYM (I) : 0.69000
REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 25.5000
REMARK 200
REMARK 200 IN THE HIGHEST RESOLUTION SHELL.
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.03
REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.10
REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8
REMARK 200 DATA REDUNDANCY IN SHELL : 5.60
REMARK 200 R MERGE FOR SHELL (I) : NULL
REMARK 200 R SYM FOR SHELL (I) : 0.58100
REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.700
REMARK 200
REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH
REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT
REMARK 200 SOFTWARE USED: PHASER
REMARK 200 STARTING MODEL: PDB ENTRY 3NZ0
REMARK 200
REMARK 200 REMARK: NULL
REMARK 280
REMARK 280 CRYSTAL
REMARK 280 SOLVENT CONTENT, VS (%): 39.65
REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.04
REMARK 280
REMARK 280 CRYSTALLIZATION CONDITIONS: 20-30% W/V PEG 3350, 0.2M MG SULFATE,
REMARK 280 0.1M MES , PH 6.5, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE
REMARK 280 291K
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY
REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21
REMARK 290
REMARK 290 SYMOP SYMMETRY
REMARK 290 NNNMMM OPERATOR
REMARK 290 1555 X,Y,Z
REMARK 290 2555 -X+1/2,-Y,Z+1/2
REMARK 290 3555 -X,Y+1/2,-Z+1/2
REMARK 290 4555 X+1/2,-Y+1/2,-Z
REMARK 290
REMARK 290 WHERE NNN -> OPERATOR NUMBER
REMARK 290 MMM -> TRANSLATION VECTOR
REMARK 290
REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS
REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM
REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY
REMARK 290 RELATED MOLECULES.
REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000
REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000
REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 18.16300
REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000
REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.66050
REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000
REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 37.02550
REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.66050
REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 18.16300
REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 37.02550
REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000
REMARK 290
REMARK 290 REMARK: NULL
REMARK 300
REMARK 300 BIOMOLECULE: 1
REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM
REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN
REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON
REMARK 300 BURIED SURFACE AREA.
REMARK 350
REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN
REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE
REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS
REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND
REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN.
REMARK 350
REMARK 350 BIOMOLECULE: 1
REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC
REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC
REMARK 350 SOFTWARE USED: PISA
REMARK 350 APPLY THE FOLLOWING TO CHAINS: A
REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000
REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000
REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000
REMARK 465
REMARK 465 MISSING RESIDUES
REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE
REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN
REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.)
REMARK 465
REMARK 465 M RES C SSSEQI
REMARK 465 MET A 882
REMARK 465 GLY A 883
REMARK 465 SER A 884
REMARK 465 PRO A 885
REMARK 465 ALA A 886
REMARK 465 SER A 887
REMARK 465 ASP A 888
REMARK 465 HIS A 1179
REMARK 465 HIS A 1180
REMARK 465 HIS A 1181
REMARK 465 HIS A 1182
REMARK 465 HIS A 1183
REMARK 500
REMARK 500 GEOMETRY AND STEREOCHEMISTRY
REMARK 500 SUBTOPIC: TORSION ANGLES
REMARK 500
REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS:
REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE).
REMARK 500
REMARK 500 STANDARD TABLE:
REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2)
REMARK 500
REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI-
REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400
REMARK 500
REMARK 500 M RES CSSEQI PSI PHI
REMARK 500 ASP A 917 76.55 -118.14
REMARK 500 SER A 973 -145.43 -153.62
REMARK 500 ARG A1022 -0.89 71.47
REMARK 500 ASP A1023 43.65 -146.71
REMARK 500 ASP A1034 -14.76 -48.22
REMARK 500 ASP A1041 84.34 58.40
REMARK 500 ALA A1115 56.73 -117.21
REMARK 500
REMARK 500 REMARK: NULL
REMARK 620
REMARK 620 METAL COORDINATION
REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER;
REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE):
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A1203 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASN A1028 OD1
REMARK 620 2 ASP A1041 OD2 88.7
REMARK 620 3 ADP A1201 O2A 89.8 93.7
REMARK 620 4 ADP A1201 O3B 177.8 92.5 92.0
REMARK 620 5 HOH A1301 O 87.8 174.9 90.0 90.9
REMARK 620 6 HOH A1342 O 93.2 83.8 176.1 85.1 92.7
REMARK 620 N 1 2 3 4 5
REMARK 620
REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL
REMARK 620 MG A1202 MG
REMARK 620 N RES CSSEQI ATOM
REMARK 620 1 ASP A1041 OD2
REMARK 620 2 ASP A1041 OD1 61.7
REMARK 620 3 ADP A1201 O1B 91.0 89.2
REMARK 620 4 HOH A1325 O 159.7 98.7 83.0
REMARK 620 5 HOH A1343 O 93.8 88.0 172.5 90.6
REMARK 620 6 HOH A1344 O 107.1 168.7 92.9 92.5 91.2
REMARK 620 N 1 2 3 4 5
REMARK 800
REMARK 800 SITE
REMARK 800 SITE_IDENTIFIER: AC1
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ADP A 1201
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC2
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1202
REMARK 800
REMARK 800 SITE_IDENTIFIER: AC3
REMARK 800 EVIDENCE_CODE: SOFTWARE
REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 1203
REMARK 900
REMARK 900 RELATED ENTRIES
REMARK 900 RELATED ID: 4GIH RELATED DB: PDB
REMARK 900 RELATED ID: 4GII RELATED DB: PDB
REMARK 900 RELATED ID: 4GJ2 RELATED DB: PDB
REMARK 900 RELATED ID: 4GJ3 RELATED DB: PDB
REMARK 900 RELATED ID: 4GFO RELATED DB: PDB
REMARK 900 RELATED ID: 4GFM RELATED DB: PDB
REMARK 900 RELATED ID: 4GMY RELATED DB: PDB
DBREF 4GVJ A 885 1176 UNP P29597 TYK2_HUMAN 885 1176
SEQADV 4GVJ MET A 882 UNP P29597 EXPRESSION TAG
SEQADV 4GVJ GLY A 883 UNP P29597 EXPRESSION TAG
SEQADV 4GVJ SER A 884 UNP P29597 EXPRESSION TAG
SEQADV 4GVJ ALA A 936 UNP P29597 CYS 936 ENGINEERED MUTATION
SEQADV 4GVJ ALA A 969 UNP P29597 GLN 969 ENGINEERED MUTATION
SEQADV 4GVJ ALA A 971 UNP P29597 GLU 971 ENGINEERED MUTATION
SEQADV 4GVJ ALA A 972 UNP P29597 LYS 972 ENGINEERED MUTATION
SEQADV 4GVJ ALA A 1142 UNP P29597 CYS 1142 ENGINEERED MUTATION
SEQADV 4GVJ ARG A 1177 UNP P29597 EXPRESSION TAG
SEQADV 4GVJ HIS A 1178 UNP P29597 EXPRESSION TAG
SEQADV 4GVJ HIS A 1179 UNP P29597 EXPRESSION TAG
SEQADV 4GVJ HIS A 1180 UNP P29597 EXPRESSION TAG
SEQADV 4GVJ HIS A 1181 UNP P29597 EXPRESSION TAG
SEQADV 4GVJ HIS A 1182 UNP P29597 EXPRESSION TAG
SEQADV 4GVJ HIS A 1183 UNP P29597 EXPRESSION TAG
SEQRES 1 A 302 MET GLY SER PRO ALA SER ASP PRO THR VAL PHE HIS LYS
SEQRES 2 A 302 ARG TYR LEU LYS LYS ILE ARG ASP LEU GLY GLU GLY HIS
SEQRES 3 A 302 PHE GLY LYS VAL SER LEU TYR CYS TYR ASP PRO THR ASN
SEQRES 4 A 302 ASP GLY THR GLY GLU MET VAL ALA VAL LYS ALA LEU LYS
SEQRES 5 A 302 ALA ASP ALA GLY PRO GLN HIS ARG SER GLY TRP LYS GLN
SEQRES 6 A 302 GLU ILE ASP ILE LEU ARG THR LEU TYR HIS GLU HIS ILE
SEQRES 7 A 302 ILE LYS TYR LYS GLY CYS CYS GLU ASP ALA GLY ALA ALA
SEQRES 8 A 302 SER LEU GLN LEU VAL MET GLU TYR VAL PRO LEU GLY SER
SEQRES 9 A 302 LEU ARG ASP TYR LEU PRO ARG HIS SER ILE GLY LEU ALA
SEQRES 10 A 302 GLN LEU LEU LEU PHE ALA GLN GLN ILE CYS GLU GLY MET
SEQRES 11 A 302 ALA TYR LEU HIS ALA GLN HIS TYR ILE HIS ARG ASP LEU
SEQRES 12 A 302 ALA ALA ARG ASN VAL LEU LEU ASP ASN ASP ARG LEU VAL
SEQRES 13 A 302 LYS ILE GLY ASP PHE GLY LEU ALA LYS ALA VAL PRO GLU
SEQRES 14 A 302 GLY HIS GLU TYR TYR ARG VAL ARG GLU ASP GLY ASP SER
SEQRES 15 A 302 PRO VAL PHE TRP TYR ALA PRO GLU CYS LEU LYS GLU TYR
SEQRES 16 A 302 LYS PHE TYR TYR ALA SER ASP VAL TRP SER PHE GLY VAL
SEQRES 17 A 302 THR LEU TYR GLU LEU LEU THR HIS CYS ASP SER SER GLN
SEQRES 18 A 302 SER PRO PRO THR LYS PHE LEU GLU LEU ILE GLY ILE ALA
SEQRES 19 A 302 GLN GLY GLN MET THR VAL LEU ARG LEU THR GLU LEU LEU
SEQRES 20 A 302 GLU ARG GLY GLU ARG LEU PRO ARG PRO ASP LYS CYS PRO
SEQRES 21 A 302 ALA GLU VAL TYR HIS LEU MET LYS ASN CYS TRP GLU THR
SEQRES 22 A 302 GLU ALA SER PHE ARG PRO THR PHE GLU ASN LEU ILE PRO
SEQRES 23 A 302 ILE LEU LYS THR VAL HIS GLU LYS TYR ARG HIS HIS HIS
SEQRES 24 A 302 HIS HIS HIS
HET ADP A1201 31
HET MG A1202 1
HET MG A1203 1
HETNAM ADP ADENOSINE-5'-DIPHOSPHATE
HETNAM MG MAGNESIUM ION
FORMUL 2 ADP C10 H15 N5 O10 P2
FORMUL 3 MG 2(MG 2+)
FORMUL 5 HOH *89(H2 O)
HELIX 1 1 HIS A 893 ARG A 895 5 3
HELIX 2 2 GLY A 937 LEU A 954 1 18
HELIX 3 3 SER A 985 LEU A 990 1 6
HELIX 4 4 PRO A 991 HIS A 993 5 3
HELIX 5 5 GLY A 996 GLN A 1017 1 22
HELIX 6 6 ALA A 1025 ARG A 1027 5 3
HELIX 7 7 PRO A 1064 TYR A 1068 5 5
HELIX 8 8 ALA A 1069 TYR A 1076 1 8
HELIX 9 9 TYR A 1080 THR A 1096 1 17
HELIX 10 10 ASP A 1099 GLN A 1102 5 4
HELIX 11 11 SER A 1103 GLY A 1113 1 11
HELIX 12 12 GLN A 1116 GLN A 1118 5 3
HELIX 13 13 MET A 1119 ARG A 1130 1 12
HELIX 14 14 PRO A 1141 TRP A 1152 1 12
HELIX 15 15 GLU A 1155 ARG A 1159 5 5
HELIX 16 16 THR A 1161 ARG A 1177 1 17
SHEET 1 A 6 VAL A 891 PHE A 892 0
SHEET 2 A 6 TYR A 962 ASP A 968 1 O CYS A 965 N PHE A 892
SHEET 3 A 6 SER A 973 GLU A 979 -1 O GLN A 975 N CYS A 966
SHEET 4 A 6 GLU A 925 LEU A 932 -1 N ALA A 928 O MET A 978
SHEET 5 A 6 GLY A 909 TYR A 916 -1 N TYR A 916 O GLU A 925
SHEET 6 A 6 LEU A 897 GLY A 904 -1 N ARG A 901 O LEU A 913
SHEET 1 B 2 TYR A1019 ILE A1020 0
SHEET 2 B 2 LYS A1046 ALA A1047 -1 O LYS A1046 N ILE A1020
SHEET 1 C 2 VAL A1029 ASN A1033 0
SHEET 2 C 2 LEU A1036 ILE A1039 -1 O LYS A1038 N LEU A1030
SHEET 1 D 2 TYR A1054 ARG A1056 0
SHEET 2 D 2 LYS A1077 TYR A1079 -1 O PHE A1078 N TYR A1055
LINK OD1 ASN A1028 MG MG A1203 1555 1555 2.10
LINK OD2 ASP A1041 MG MG A1202 1555 1555 2.13
LINK OD1 ASP A1041 MG MG A1202 1555 1555 2.15
LINK OD2 ASP A1041 MG MG A1203 1555 1555 2.02
LINK O1B ADP A1201 MG MG A1202 1555 1555 2.15
LINK O2A ADP A1201 MG MG A1203 1555 1555 1.99
LINK O3B ADP A1201 MG MG A1203 1555 1555 2.07
LINK MG MG A1202 O HOH A1325 1555 1555 1.95
LINK MG MG A1202 O HOH A1343 1555 1555 2.19
LINK MG MG A1202 O HOH A1344 1555 1555 1.93
LINK MG MG A1203 O HOH A1301 1555 1555 1.96
LINK MG MG A1203 O HOH A1342 1555 1555 2.21
CISPEP 1 GLU A 905 GLY A 906 0 1.41
CISPEP 2 HIS A 907 PHE A 908 0 12.05
CISPEP 3 ALA A 971 ALA A 972 0 -0.93
SITE 1 AC1 22 VAL A 911 ALA A 928 LYS A 930 GLU A 979
SITE 2 AC1 22 TYR A 980 VAL A 981 ASP A 988 ARG A1027
SITE 3 AC1 22 ASN A1028 LEU A1030 ASP A1041 MG A1202
SITE 4 AC1 22 MG A1203 HOH A1301 HOH A1312 HOH A1316
SITE 5 AC1 22 HOH A1325 HOH A1330 HOH A1342 HOH A1344
SITE 6 AC1 22 HOH A1348 HOH A1355
SITE 1 AC2 7 ASP A1023 ASP A1041 ADP A1201 MG A1203
SITE 2 AC2 7 HOH A1325 HOH A1343 HOH A1344
SITE 1 AC3 6 ASN A1028 ASP A1041 ADP A1201 MG A1202
SITE 2 AC3 6 HOH A1301 HOH A1342
CRYST1 36.326 74.051 105.321 90.00 90.00 90.00 P 21 21 21 4
ORIGX1 1.000000 0.000000 0.000000 0.00000
ORIGX2 0.000000 1.000000 0.000000 0.00000
ORIGX3 0.000000 0.000000 1.000000 0.00000
SCALE1 0.027528 0.000000 0.000000 0.00000
SCALE2 0.000000 0.013504 0.000000 0.00000
SCALE3 0.000000 0.000000 0.009495 0.00000