HEADER OXIDOREDUCTASE 02-SEP-12 4GWE TITLE W116L-OYE1 COMPLEXED WITH (R)-CARVONE COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADPH DEHYDROGENASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OLD YELLOW ENZYME 1; COMPND 5 EC: 1.6.99.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES PASTORIANUS; SOURCE 3 ORGANISM_COMMON: LAGER YEAST; SOURCE 4 ORGANISM_TAXID: 27292; SOURCE 5 GENE: OYE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS REDUCTASE, ENANTIOSELECTIVITY, FLIPPED BINDING, CARVONE, ENOATE KEYWDS 2 REDUCTASE, OYE, OLD YELLOW ENZYME, BIOCATALYSIS, ATOMIC RESOLUTION, KEYWDS 3 TIM BARREL, ALPHA/BETA BARREL, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.A.POMPEU,J.D.STEWART REVDAT 3 13-SEP-23 4GWE 1 REMARK SEQADV LINK REVDAT 2 09-OCT-13 4GWE 1 JRNL REMARK REVDAT 1 03-OCT-12 4GWE 0 JRNL AUTH Y.A.POMPEU,B.SULLIVAN,J.D.STEWART JRNL TITL X‑RAY CRYSTALLOGRAPHY REVEALS HOW SUBTLE CHANGES JRNL TITL 2 CONTROL THE ORIENTATION OF SUBSTRATE BINDING IN AN ALKENE JRNL TITL 3 REDUCTASE JRNL REF ACS CATALYSIS V. 3 2376 2013 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/CS400622E REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.16 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 90.8 REMARK 3 NUMBER OF REFLECTIONS : 70001 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.118 REMARK 3 R VALUE (WORKING SET) : 0.115 REMARK 3 FREE R VALUE : 0.145 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.050 REMARK 3 FREE R VALUE TEST SET COUNT : 7038 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.1613 - 4.4884 0.97 2481 277 0.1664 0.1767 REMARK 3 2 4.4884 - 3.5648 0.99 2370 264 0.1253 0.1370 REMARK 3 3 3.5648 - 3.1149 0.99 2351 260 0.1421 0.1581 REMARK 3 4 3.1149 - 2.8304 0.98 2308 259 0.1313 0.1560 REMARK 3 5 2.8304 - 2.6277 0.98 2307 251 0.1193 0.1374 REMARK 3 6 2.6277 - 2.4728 0.98 2288 254 0.1158 0.1409 REMARK 3 7 2.4728 - 2.3491 0.98 2277 255 0.1100 0.1433 REMARK 3 8 2.3491 - 2.2468 0.99 2291 254 0.1076 0.1368 REMARK 3 9 2.2468 - 2.1604 0.97 2244 255 0.1030 0.1352 REMARK 3 10 2.1604 - 2.0859 0.96 2234 250 0.1059 0.1281 REMARK 3 11 2.0859 - 2.0207 0.98 2265 249 0.1033 0.1438 REMARK 3 12 2.0207 - 1.9629 0.97 2217 244 0.1062 0.1305 REMARK 3 13 1.9629 - 1.9112 0.97 2230 247 0.1070 0.1312 REMARK 3 14 1.9112 - 1.8646 0.97 2222 248 0.1025 0.1491 REMARK 3 15 1.8646 - 1.8222 0.96 2216 247 0.0991 0.1374 REMARK 3 16 1.8222 - 1.7835 0.97 2199 246 0.0966 0.1493 REMARK 3 17 1.7835 - 1.7478 0.95 2182 247 0.0965 0.1411 REMARK 3 18 1.7478 - 1.7148 0.95 2153 235 0.0884 0.1281 REMARK 3 19 1.7148 - 1.6842 0.95 2183 251 0.0886 0.1305 REMARK 3 20 1.6842 - 1.6557 0.94 2130 245 0.0885 0.1471 REMARK 3 21 1.6557 - 1.6290 0.92 2101 237 0.0823 0.1551 REMARK 3 22 1.6290 - 1.6039 0.93 2125 238 0.0855 0.1508 REMARK 3 23 1.6039 - 1.5803 0.91 2058 230 0.0839 0.1378 REMARK 3 24 1.5803 - 1.5581 0.89 2063 230 0.0861 0.1334 REMARK 3 25 1.5581 - 1.5370 0.91 2056 234 0.0796 0.1517 REMARK 3 26 1.5370 - 1.5170 0.84 1921 214 0.0827 0.1390 REMARK 3 27 1.5170 - 1.4981 0.70 1600 184 0.0813 0.1395 REMARK 3 28 1.4981 - 1.4800 0.62 1409 162 0.0853 0.1475 REMARK 3 29 1.4800 - 1.4628 0.57 1289 143 0.0844 0.1420 REMARK 3 30 1.4628 - 1.4500 0.52 1193 128 0.0818 0.1481 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.090 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.620 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 11.32 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 3413 REMARK 3 ANGLE : 1.251 4646 REMARK 3 CHIRALITY : 0.079 479 REMARK 3 PLANARITY : 0.007 609 REMARK 3 DIHEDRAL : 14.683 1289 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GWE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 04-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074716. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 26-APR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X26C REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 70049 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 90.5 REMARK 200 DATA REDUNDANCY : 12.80 REMARK 200 R MERGE (I) : 0.04400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 71.0000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.48 REMARK 200 COMPLETENESS FOR SHELL (%) : 52.6 REMARK 200 DATA REDUNDANCY IN SHELL : 11.70 REMARK 200 R MERGE FOR SHELL (I) : 0.18000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 10.00 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 1OYA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.75 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 0.2M MGCL2, 35%PEG400, PH REMARK 280 8.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.38000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 70.39000 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 70.39000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 32.07000 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 70.39000 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 70.39000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 10.69000 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 70.39000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 70.39000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 32.07000 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 70.39000 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 70.39000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 10.69000 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 21.38000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 MG MG A 402 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 781 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 798 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 903 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 969 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 979 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1011 LIES ON A SPECIAL POSITION. REMARK 375 HOH A1039 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 0 REMARK 465 LYS A 399 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 891 O HOH A 1042 2.10 REMARK 500 O HOH A 738 O HOH A 1035 2.15 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 5 -20.65 78.02 REMARK 500 ASN A 156 58.10 -140.23 REMARK 500 SER A 252 33.28 70.90 REMARK 500 ASP A 355 37.09 -99.26 REMARK 500 TYR A 382 -59.55 -128.82 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 404 REMARK 610 1PE A 406 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 402 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 624 O REMARK 620 2 HOH A 731 O 93.5 REMARK 620 3 HOH A 781 O 90.6 88.9 REMARK 620 4 HOH A 798 O 89.4 91.1 180.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 613 O REMARK 620 2 HOH A 760 O 89.3 REMARK 620 3 HOH A 825 O 163.0 76.4 REMARK 620 4 HOH A 933 O 79.4 91.8 109.8 REMARK 620 5 HOH A 934 O 110.1 159.6 85.3 85.8 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 408 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 1PE A 404 OH5 REMARK 620 2 1PE A 404 OH6 55.2 REMARK 620 3 1PE A 404 OH4 61.9 108.5 REMARK 620 4 HOH A 901 O 54.9 57.7 108.2 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 405 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 1PE A 406 OH4 REMARK 620 2 1PE A 406 OH5 59.5 REMARK 620 3 HOH A 671 O 106.9 140.3 REMARK 620 4 HOH A 972 O 133.3 89.0 74.8 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 405 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 406 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 407 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 408 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 07V A 409 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GBU RELATED DB: PDB REMARK 900 RELATED ID: 4GE8 RELATED DB: PDB REMARK 900 RELATED ID: 3TXZ RELATED DB: PDB REMARK 900 RELATED ID: 4GXM RELATED DB: PDB REMARK 900 RELATED ID: 3RND RELATED DB: PDB REMARK 900 RELATED ID: 3TX9 RELATED DB: PDB REMARK 900 RELATED ID: 4H4I RELATED DB: PDB REMARK 900 RELATED ID: 4H6K RELATED DB: PDB REMARK 900 RELATED ID: 4K7V RELATED DB: PDB REMARK 900 RELATED ID: 4K7Y RELATED DB: PDB REMARK 900 RELATED ID: 4K8E RELATED DB: PDB REMARK 900 RELATED ID: 4K8H RELATED DB: PDB DBREF 4GWE A 0 399 UNP Q02899 OYE1_SACPS 1 400 SEQADV 4GWE LEU A 116 UNP Q02899 TRP 117 ENGINEERED MUTATION SEQRES 1 A 400 MET SER PHE VAL LYS ASP PHE LYS PRO GLN ALA LEU GLY SEQRES 2 A 400 ASP THR ASN LEU PHE LYS PRO ILE LYS ILE GLY ASN ASN SEQRES 3 A 400 GLU LEU LEU HIS ARG ALA VAL ILE PRO PRO LEU THR ARG SEQRES 4 A 400 MET ARG ALA LEU HIS PRO GLY ASN ILE PRO ASN ARG ASP SEQRES 5 A 400 TRP ALA VAL GLU TYR TYR THR GLN ARG ALA GLN ARG PRO SEQRES 6 A 400 GLY THR MET ILE ILE THR GLU GLY ALA PHE ILE SER PRO SEQRES 7 A 400 GLN ALA GLY GLY TYR ASP ASN ALA PRO GLY VAL TRP SER SEQRES 8 A 400 GLU GLU GLN MET VAL GLU TRP THR LYS ILE PHE ASN ALA SEQRES 9 A 400 ILE HIS GLU LYS LYS SER PHE VAL TRP VAL GLN LEU LEU SEQRES 10 A 400 VAL LEU GLY TRP ALA ALA PHE PRO ASP ASN LEU ALA ARG SEQRES 11 A 400 ASP GLY LEU ARG TYR ASP SER ALA SER ASP ASN VAL PHE SEQRES 12 A 400 MET ASP ALA GLU GLN GLU ALA LYS ALA LYS LYS ALA ASN SEQRES 13 A 400 ASN PRO GLN HIS SER LEU THR LYS ASP GLU ILE LYS GLN SEQRES 14 A 400 TYR ILE LYS GLU TYR VAL GLN ALA ALA LYS ASN SER ILE SEQRES 15 A 400 ALA ALA GLY ALA ASP GLY VAL GLU ILE HIS SER ALA ASN SEQRES 16 A 400 GLY TYR LEU LEU ASN GLN PHE LEU ASP PRO HIS SER ASN SEQRES 17 A 400 THR ARG THR ASP GLU TYR GLY GLY SER ILE GLU ASN ARG SEQRES 18 A 400 ALA ARG PHE THR LEU GLU VAL VAL ASP ALA LEU VAL GLU SEQRES 19 A 400 ALA ILE GLY HIS GLU LYS VAL GLY LEU ARG LEU SER PRO SEQRES 20 A 400 TYR GLY VAL PHE ASN SER MET SER GLY GLY ALA GLU THR SEQRES 21 A 400 GLY ILE VAL ALA GLN TYR ALA TYR VAL ALA GLY GLU LEU SEQRES 22 A 400 GLU LYS ARG ALA LYS ALA GLY LYS ARG LEU ALA PHE VAL SEQRES 23 A 400 HIS LEU VAL GLU PRO ARG VAL THR ASN PRO PHE LEU THR SEQRES 24 A 400 GLU GLY GLU GLY GLU TYR GLU GLY GLY SER ASN ASP PHE SEQRES 25 A 400 VAL TYR SER ILE TRP LYS GLY PRO VAL ILE ARG ALA GLY SEQRES 26 A 400 ASN PHE ALA LEU HIS PRO GLU VAL VAL ARG GLU GLU VAL SEQRES 27 A 400 LYS ASP LYS ARG THR LEU ILE GLY TYR GLY ARG PHE PHE SEQRES 28 A 400 ILE SER ASN PRO ASP LEU VAL ASP ARG LEU GLU LYS GLY SEQRES 29 A 400 LEU PRO LEU ASN LYS TYR ASP ARG ASP THR PHE TYR GLN SEQRES 30 A 400 MET SER ALA HIS GLY TYR ILE ASP TYR PRO THR TYR GLU SEQRES 31 A 400 GLU ALA LEU LYS LEU GLY TRP ASP LYS LYS HET FMN A 401 31 HET MG A 402 1 HET MG A 403 1 HET 1PE A 404 10 HET NA A 405 1 HET 1PE A 406 8 HET CL A 407 1 HET NA A 408 1 HET 07V A 409 11 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM MG MAGNESIUM ION HETNAM 1PE PENTAETHYLENE GLYCOL HETNAM NA SODIUM ION HETNAM CL CHLORIDE ION HETNAM 07V (5R)-2-METHYL-5-(PROP-1-EN-2-YL)CYCLOHEX-2-EN-1-ONE HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN 1PE PEG400 HETSYN 07V R-CARVONE FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 3 MG 2(MG 2+) FORMUL 5 1PE 2(C10 H22 O6) FORMUL 6 NA 2(NA 1+) FORMUL 8 CL CL 1- FORMUL 10 07V C10 H14 O FORMUL 11 HOH *590(H2 O) HELIX 1 1 THR A 14 LYS A 18 5 5 HELIX 2 2 TRP A 52 ALA A 61 1 10 HELIX 3 3 SER A 76 GLY A 80 5 5 HELIX 4 4 SER A 90 LYS A 107 1 18 HELIX 5 5 LEU A 118 ALA A 122 5 5 HELIX 6 6 PHE A 123 ASP A 130 1 8 HELIX 7 7 ASP A 144 ALA A 154 1 11 HELIX 8 8 THR A 162 ALA A 183 1 22 HELIX 9 9 TYR A 196 ASP A 203 1 8 HELIX 10 10 SER A 216 ALA A 221 1 6 HELIX 11 11 ALA A 221 GLY A 236 1 16 HELIX 12 12 VAL A 249 MET A 253 5 5 HELIX 13 13 SER A 254 GLU A 258 5 5 HELIX 14 14 GLY A 260 ALA A 278 1 19 HELIX 15 15 ASP A 310 TRP A 316 1 7 HELIX 16 16 HIS A 329 VAL A 337 1 9 HELIX 17 17 GLY A 347 ASN A 353 1 7 HELIX 18 18 ASP A 355 GLY A 363 1 9 HELIX 19 19 ASP A 370 PHE A 374 5 5 HELIX 20 20 THR A 387 LEU A 394 1 8 SHEET 1 A 2 ILE A 20 ILE A 22 0 SHEET 2 A 2 ASN A 25 LEU A 27 -1 O ASN A 25 N ILE A 22 SHEET 1 B 8 ALA A 31 VAL A 32 0 SHEET 2 B 8 THR A 342 GLY A 345 1 O ILE A 344 N VAL A 32 SHEET 3 B 8 VAL A 320 ALA A 323 1 N ARG A 322 O GLY A 345 SHEET 4 B 8 PHE A 284 VAL A 288 1 N LEU A 287 O ILE A 321 SHEET 5 B 8 VAL A 240 LEU A 244 1 N LEU A 242 O HIS A 286 SHEET 6 B 8 GLY A 187 HIS A 191 1 N ILE A 190 O GLY A 241 SHEET 7 B 8 PHE A 110 LEU A 116 1 N LEU A 115 O GLU A 189 SHEET 8 B 8 MET A 67 ILE A 69 1 N ILE A 68 O TRP A 112 SHEET 1 C 8 ALA A 31 VAL A 32 0 SHEET 2 C 8 THR A 342 GLY A 345 1 O ILE A 344 N VAL A 32 SHEET 3 C 8 VAL A 320 ALA A 323 1 N ARG A 322 O GLY A 345 SHEET 4 C 8 PHE A 284 VAL A 288 1 N LEU A 287 O ILE A 321 SHEET 5 C 8 VAL A 240 LEU A 244 1 N LEU A 242 O HIS A 286 SHEET 6 C 8 GLY A 187 HIS A 191 1 N ILE A 190 O GLY A 241 SHEET 7 C 8 PHE A 110 LEU A 116 1 N LEU A 115 O GLU A 189 SHEET 8 C 8 ALA A 73 PHE A 74 1 N ALA A 73 O LEU A 116 SHEET 1 D 2 ASP A 135 SER A 136 0 SHEET 2 D 2 HIS A 159 SER A 160 1 O HIS A 159 N SER A 136 LINK MG MG A 402 O HOH A 624 1555 1555 2.06 LINK MG MG A 402 O HOH A 731 1555 1555 2.07 LINK MG MG A 402 O HOH A 781 1555 1555 2.09 LINK MG MG A 402 O HOH A 798 1555 1555 2.07 LINK MG MG A 403 O HOH A 613 1555 1555 2.27 LINK MG MG A 403 O HOH A 760 1555 1555 1.93 LINK MG MG A 403 O HOH A 825 1555 1555 2.75 LINK MG MG A 403 O HOH A 933 1555 1555 2.17 LINK MG MG A 403 O HOH A 934 1555 1555 1.92 LINK OH5 1PE A 404 NA NA A 408 1555 1555 2.84 LINK OH6 1PE A 404 NA NA A 408 1555 1555 3.05 LINK OH4 1PE A 404 NA NA A 408 1555 1555 3.09 LINK NA NA A 405 OH4 1PE A 406 1555 1555 2.93 LINK NA NA A 405 OH5 1PE A 406 1555 1555 3.19 LINK NA NA A 405 O HOH A 671 1555 1555 2.69 LINK NA NA A 405 O HOH A 972 1555 1555 3.17 LINK NA NA A 408 O HOH A 901 1555 1555 2.25 CISPEP 1 HIS A 43 PRO A 44 0 2.36 SITE 1 AC1 20 PRO A 34 PRO A 35 LEU A 36 THR A 37 SITE 2 AC1 20 GLY A 72 GLN A 114 HIS A 191 ASN A 194 SITE 3 AC1 20 ARG A 243 GLY A 324 ASN A 325 GLY A 347 SITE 4 AC1 20 ARG A 348 PHE A 374 TYR A 375 07V A 409 SITE 5 AC1 20 HOH A 542 HOH A 553 HOH A 564 HOH A 607 SITE 1 AC2 4 HOH A 624 HOH A 731 HOH A 781 HOH A 798 SITE 1 AC3 6 HOH A 613 HOH A 760 HOH A 825 HOH A 895 SITE 2 AC3 6 HOH A 933 HOH A 934 SITE 1 AC4 7 ASP A 51 TRP A 52 ASP A 358 GLU A 389 SITE 2 AC4 7 NA A 408 HOH A 901 HOH A1040 SITE 1 AC5 3 TRP A 396 1PE A 406 HOH A 671 SITE 1 AC6 5 ASP A 370 HIS A 380 ASP A 384 PRO A 386 SITE 2 AC6 5 NA A 405 SITE 1 AC7 2 ASP A 83 ASN A 126 SITE 1 AC8 3 TRP A 52 1PE A 404 HOH A 901 SITE 1 AC9 9 THR A 37 HIS A 191 ASN A 194 TYR A 196 SITE 2 AC9 9 PHE A 250 PRO A 295 PHE A 296 TYR A 375 SITE 3 AC9 9 FMN A 401 CRYST1 140.780 140.780 42.760 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007103 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007103 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023386 0.00000