HEADER TRANSFERASE 05-SEP-12 4GYG TITLE CRYSTAL STRUCTURE OF THE RIO2 KINASE FROM CHAETOMIUM THERMOPHILUM COMPND MOL_ID: 1; COMPND 2 MOLECULE: RIO2 KINASE; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CHAETOMIUM THERMOPHILUM; SOURCE 3 ORGANISM_TAXID: 759272; SOURCE 4 STRAIN: DSM 1495 / CBS 144.50 / IMI 039719; SOURCE 5 GENE: CTHT_0033330, RIO2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA(TM) PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PT7 KEYWDS RIO-TYPE SER/THR PROTEIN KINASE, RIBOSOME BIOGENESIS FACTOR, PRE-40S KEYWDS 2 MATURATION, RIBOSOMAL RNA PROCESSING, PRE-40S, RIBOSOMAL RNA, KEYWDS 3 PHOSPHORYLATION, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR S.FERREIRA-CERCA,V.SAGAR,T.SCHAFER,M.DIOP,A.M.WESSELING,H.LU,E.CHAI, AUTHOR 2 E.HURT,N.LARONDE-LEBLANC REVDAT 4 13-SEP-23 4GYG 1 SEQADV REVDAT 3 26-DEC-12 4GYG 1 JRNL REVDAT 2 12-DEC-12 4GYG 1 JRNL REVDAT 1 17-OCT-12 4GYG 0 JRNL AUTH S.FERREIRA-CERCA,V.SAGAR,T.SCHAFER,M.DIOP,A.M.WESSELING, JRNL AUTH 2 H.LU,E.CHAI,E.HURT,N.LARONDE-LEBLANC JRNL TITL ATPASE-DEPENDENT ROLE OF THE ATYPICAL KINASE RIO2 ON THE JRNL TITL 2 EVOLVING PRE-40S RIBOSOMAL SUBUNIT. JRNL REF NAT.STRUCT.MOL.BIOL. V. 19 1316 2012 JRNL REFN ISSN 1545-9993 JRNL PMID 23104056 JRNL DOI 10.1038/NSMB.2403 REMARK 2 REMARK 2 RESOLUTION. 2.48 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.48 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 33.89 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.960 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 3 NUMBER OF REFLECTIONS : 12669 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.183 REMARK 3 FREE R VALUE : 0.244 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.360 REMARK 3 FREE R VALUE TEST SET COUNT : 1059 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 33.8930 - 4.9596 0.95 1424 131 0.1773 0.1926 REMARK 3 2 4.9596 - 3.9385 0.97 1418 135 0.1611 0.2358 REMARK 3 3 3.9385 - 3.4412 0.98 1444 130 0.1694 0.2314 REMARK 3 4 3.4412 - 3.1268 0.98 1499 100 0.1923 0.3100 REMARK 3 5 3.1268 - 2.9028 0.98 1436 151 0.2023 0.2799 REMARK 3 6 2.9028 - 2.7318 0.99 1488 119 0.2014 0.2878 REMARK 3 7 2.7318 - 2.5950 0.98 1439 148 0.2270 0.3177 REMARK 3 8 2.5950 - 2.4821 0.99 1462 145 0.2607 0.3340 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.370 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 27.320 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 51.70 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 56.20 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.008 2683 REMARK 3 ANGLE : 1.165 3616 REMARK 3 CHIRALITY : 0.072 402 REMARK 3 PLANARITY : 0.005 463 REMARK 3 DIHEDRAL : 15.855 1018 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 2:58 ) REMARK 3 ORIGIN FOR THE GROUP (A): 156.5890 -13.2231 34.9594 REMARK 3 T TENSOR REMARK 3 T11: 0.5383 T22: 0.8754 REMARK 3 T33: 0.5398 T12: -0.2919 REMARK 3 T13: -0.0225 T23: -0.0156 REMARK 3 L TENSOR REMARK 3 L11: 5.7964 L22: 2.7305 REMARK 3 L33: 1.9142 L12: 0.4645 REMARK 3 L13: -1.3231 L23: 0.2808 REMARK 3 S TENSOR REMARK 3 S11: 0.1318 S12: -0.9286 S13: 0.1075 REMARK 3 S21: 0.1081 S22: 0.1999 S23: -0.5746 REMARK 3 S31: -0.4945 S32: 1.3658 S33: -0.3011 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 59:113 ) REMARK 3 ORIGIN FOR THE GROUP (A): 147.3653 -19.1010 32.3851 REMARK 3 T TENSOR REMARK 3 T11: 0.4386 T22: 0.3811 REMARK 3 T33: 0.3135 T12: -0.0278 REMARK 3 T13: -0.0750 T23: 0.1242 REMARK 3 L TENSOR REMARK 3 L11: 5.2812 L22: 2.2731 REMARK 3 L33: 4.2497 L12: -0.6141 REMARK 3 L13: -2.1289 L23: 0.3597 REMARK 3 S TENSOR REMARK 3 S11: -0.1476 S12: -0.5295 S13: -0.2020 REMARK 3 S21: 0.0714 S22: -0.1812 S23: -0.0472 REMARK 3 S31: 0.1199 S32: 0.6175 S33: 0.3381 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 114:312 ) REMARK 3 ORIGIN FOR THE GROUP (A): 125.6774 -21.6656 20.0248 REMARK 3 T TENSOR REMARK 3 T11: 0.3674 T22: 0.2707 REMARK 3 T33: 0.3965 T12: -0.0017 REMARK 3 T13: 0.0062 T23: -0.0564 REMARK 3 L TENSOR REMARK 3 L11: 2.0137 L22: 1.3606 REMARK 3 L33: 2.5508 L12: -0.2257 REMARK 3 L13: 0.4715 L23: -0.9517 REMARK 3 S TENSOR REMARK 3 S11: 0.0656 S12: 0.0614 S13: -0.3236 REMARK 3 S21: -0.1435 S22: 0.0393 S23: 0.2915 REMARK 3 S31: -0.0489 S32: -0.3659 S33: -0.0650 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 313:341 ) REMARK 3 ORIGIN FOR THE GROUP (A): 137.9390 -14.7672 11.9050 REMARK 3 T TENSOR REMARK 3 T11: 0.7103 T22: 0.4563 REMARK 3 T33: 0.4225 T12: 0.0640 REMARK 3 T13: 0.0410 T23: -0.0214 REMARK 3 L TENSOR REMARK 3 L11: 7.0735 L22: 0.7561 REMARK 3 L33: 4.2871 L12: 1.1304 REMARK 3 L13: -0.5427 L23: -1.6482 REMARK 3 S TENSOR REMARK 3 S11: 0.3025 S12: 0.5930 S13: -0.1972 REMARK 3 S21: -0.7662 S22: -0.2998 S23: -0.1015 REMARK 3 S31: -0.2538 S32: 0.5776 S33: -0.0685 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4GYG COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 14-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074790. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 24-ID-E REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9792 REMARK 200 MONOCHROMATOR : KOHZU HLD8-24 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 12674 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.480 REMARK 200 RESOLUTION RANGE LOW (A) : 33.900 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.8 REMARK 200 DATA REDUNDANCY : 2.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.07400 REMARK 200 FOR THE DATA SET : 12.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.82 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.96 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.8 REMARK 200 DATA REDUNDANCY IN SHELL : 2.90 REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : 0.16300 REMARK 200 FOR SHELL : 0.071 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: 1TQP REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.86 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.12 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M TRIS, 16% POLY-ETHYLENE GLYCOL, REMARK 280 PH 8.5, VAPOR DIFFUSION, HANGING DROP REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 X+2/3,Y+1/3,Z+1/3 REMARK 290 5555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 6555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 7555 X+1/3,Y+2/3,Z+2/3 REMARK 290 8555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 9555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 58.69900 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 33.88988 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 23.76367 REMARK 290 SMTRY1 5 -0.500000 -0.866025 0.000000 58.69900 REMARK 290 SMTRY2 5 0.866025 -0.500000 0.000000 33.88988 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 23.76367 REMARK 290 SMTRY1 6 -0.500000 0.866025 0.000000 58.69900 REMARK 290 SMTRY2 6 -0.866025 -0.500000 0.000000 33.88988 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 23.76367 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 67.77977 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 47.52733 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 67.77977 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 47.52733 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 67.77977 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 47.52733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 SER A 0 REMARK 465 MET A 1 REMARK 465 ALA A 41 REMARK 465 ARG A 42 REMARK 465 LEU A 43 REMARK 465 ARG A 44 REMARK 465 GLY A 45 REMARK 465 GLY A 46 REMARK 465 SER A 47 REMARK 465 SER A 48 REMARK 465 ALA A 138 REMARK 465 ASN A 139 REMARK 465 ASN A 343 REMARK 465 ASP A 344 REMARK 465 GLU A 345 REMARK 465 GLU A 346 REMARK 465 ASP A 347 REMARK 465 SER A 348 REMARK 465 ASP A 349 REMARK 465 ASP A 350 REMARK 465 TYR A 351 REMARK 465 GLU A 352 REMARK 465 GLU A 353 REMARK 465 ASP A 354 REMARK 465 SER A 355 REMARK 465 ASP A 356 REMARK 465 LYS A 357 REMARK 465 GLU A 358 REMARK 465 LYS A 359 REMARK 465 ALA A 360 REMARK 465 SER A 361 REMARK 465 ASN A 362 REMARK 465 GLU A 363 REMARK 465 ASP A 364 REMARK 465 THR A 365 REMARK 465 ASP A 366 REMARK 465 VAL A 367 REMARK 465 ASP A 368 REMARK 465 ASP A 369 REMARK 465 GLY A 370 REMARK 465 ARG A 371 REMARK 465 LEU A 372 REMARK 465 GLN A 373 REMARK 465 VAL A 374 REMARK 465 ILE A 375 REMARK 465 GLY A 376 REMARK 465 ASP A 377 REMARK 465 HIS A 378 REMARK 465 VAL A 379 REMARK 465 GLN A 380 REMARK 465 LEU A 381 REMARK 465 GLY A 382 REMARK 465 THR A 383 REMARK 465 GLU A 384 REMARK 465 GLY A 385 REMARK 465 ASP A 386 REMARK 465 LEU A 387 REMARK 465 LYS A 388 REMARK 465 LYS A 389 REMARK 465 LEU A 390 REMARK 465 THR A 391 REMARK 465 ILE A 392 REMARK 465 ASN A 393 REMARK 465 ASP A 394 REMARK 465 GLY A 395 REMARK 465 THR A 396 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 2 CG CD CE NZ REMARK 470 ASN A 28 CG OD1 ND2 REMARK 470 LYS A 67 CG CD CE NZ REMARK 470 LYS A 137 CG CD CE NZ REMARK 470 ARG A 140 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 427 O HOH A 436 1.99 REMARK 500 N LYS A 2 O HOH A 409 2.03 REMARK 500 NH2 ARG A 219 O HOH A 433 2.13 REMARK 500 OD2 ASP A 205 OG SER A 208 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 28 -65.73 -105.10 REMARK 500 LYS A 67 75.43 -113.18 REMARK 500 ALA A 69 -63.66 -177.13 REMARK 500 ARG A 127 41.29 -142.64 REMARK 500 ARG A 184 -119.31 59.45 REMARK 500 ASP A 229 38.85 -140.74 REMARK 500 PHE A 230 45.62 -51.68 REMARK 500 ASN A 231 -165.50 -65.97 REMARK 500 ASP A 257 94.28 78.54 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4GYI RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE RIO2 KINASE-ADP/MG2+-PHOSPHOASPARTATE REMARK 900 COMPLEX FROM CHAETOMIUM THERMOPHILUM REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE AS PROVIDED, INCLUDING RESIDUES 1-23 IS THE CORRECT REMARK 999 SEQUENCE OF THE PROTEIN. THE UNIPROT DATABASE HAVE BEEN NOTIFIED OF REMARK 999 THE ERROR DBREF 4GYG A 24 396 UNP G0S5R3 G0S5R3_CHATD 1 373 SEQADV 4GYG SER A 0 UNP G0S5R3 EXPRESSION TAG SEQADV 4GYG MET A 1 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG LYS A 2 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG LEU A 3 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG ASP A 4 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG THR A 5 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG ARG A 6 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG ALA A 7 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG MET A 8 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG ARG A 9 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG HIS A 10 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG LEU A 11 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG THR A 12 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG ALA A 13 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG GLU A 14 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG ASP A 15 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG TRP A 16 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG ARG A 17 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG VAL A 18 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG LEU A 19 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG THR A 20 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG ALA A 21 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG VAL A 22 UNP G0S5R3 SEE REMARK 999 SEQADV 4GYG GLU A 23 UNP G0S5R3 SEE REMARK 999 SEQRES 1 A 397 SER MET LYS LEU ASP THR ARG ALA MET ARG HIS LEU THR SEQRES 2 A 397 ALA GLU ASP TRP ARG VAL LEU THR ALA VAL GLU MET GLY SEQRES 3 A 397 SER LYS ASN HIS GLU ILE VAL PRO THR PRO LEU ILE GLU SEQRES 4 A 397 LYS ILE ALA ARG LEU ARG GLY GLY SER SER GLY VAL HIS SEQRES 5 A 397 LYS SER ILE ALA THR LEU ALA LYS ALA GLY LEU ILE ALA SEQRES 6 A 397 ARG MET LYS GLU ALA LYS TYR ASP GLY TYR ARG LEU THR SEQRES 7 A 397 TYR GLY GLY LEU ASP TYR LEU ALA LEU HIS THR HIS ALA SEQRES 8 A 397 ALA ARG LYS ASP VAL TYR SER VAL GLY SER ARG ILE GLY SEQRES 9 A 397 VAL GLY LYS GLU SER ASP ILE MET ILE VAL ALA ASP GLU SEQRES 10 A 397 LYS GLY LYS GLN LYS VAL LEU LYS ILE HIS ARG LEU GLY SEQRES 11 A 397 ARG ILE SER PHE ARG THR VAL LYS ALA ASN ARG ASP TYR SEQRES 12 A 397 LEU ARG ASN ARG SER THR GLY SER TRP MET TYR LEU SER SEQRES 13 A 397 ARG LEU ALA ALA ILE LYS GLU PHE ALA PHE MET LYS ALA SEQRES 14 A 397 LEU TYR GLU GLU GLY PHE PRO VAL PRO GLU PRO ILE ALA SEQRES 15 A 397 GLN SER ARG HIS THR ILE VAL MET SER LEU VAL ASP ALA SEQRES 16 A 397 LEU PRO MET ARG GLN VAL SER SER VAL PRO ASP PRO ALA SEQRES 17 A 397 SER LEU TYR ALA ASP LEU ILE ALA LEU ILE LEU ARG LEU SEQRES 18 A 397 ALA LYS HIS GLY LEU ILE HIS GLY ASP PHE ASN GLU PHE SEQRES 19 A 397 ASN ILE LEU ILE ARG GLU GLU LYS ASP ALA GLU ASP PRO SEQRES 20 A 397 SER SER ILE THR LEU THR PRO ILE ILE ILE ASP PHE PRO SEQRES 21 A 397 GLN MET VAL SER MET ASP HIS PRO ASN ALA GLU MET TYR SEQRES 22 A 397 PHE ASP ARG ASP VAL GLN CYS ILE LYS ARG PHE PHE GLU SEQRES 23 A 397 ARG ARG PHE HIS PHE VAL SER THR THR PRO GLY PRO PHE SEQRES 24 A 397 TYR LYS ASP ALA LYS LYS THR VAL GLY LYS ASP GLY ALA SEQRES 25 A 397 LYS ARG LEU ASP ALA ALA LEU GLU ALA SER GLY PHE THR SEQRES 26 A 397 LYS LYS MET ALA LYS ASP LEU GLU ALA ALA ILE ARG GLU SEQRES 27 A 397 GLN GLN GLU SER ARG ASN ASP GLU GLU ASP SER ASP ASP SEQRES 28 A 397 TYR GLU GLU ASP SER ASP LYS GLU LYS ALA SER ASN GLU SEQRES 29 A 397 ASP THR ASP VAL ASP ASP GLY ARG LEU GLN VAL ILE GLY SEQRES 30 A 397 ASP HIS VAL GLN LEU GLY THR GLU GLY ASP LEU LYS LYS SEQRES 31 A 397 LEU THR ILE ASN ASP GLY THR FORMUL 2 HOH *41(H2 O) HELIX 1 1 THR A 5 LEU A 11 5 7 HELIX 2 2 THR A 12 SER A 26 1 15 HELIX 3 3 PRO A 33 ILE A 40 1 8 HELIX 4 4 VAL A 50 ALA A 60 1 11 HELIX 5 5 THR A 77 ARG A 92 1 16 HELIX 6 6 SER A 147 GLU A 172 1 26 HELIX 7 7 ARG A 198 VAL A 200 5 3 HELIX 8 8 ASP A 205 HIS A 223 1 19 HELIX 9 9 ASN A 268 HIS A 289 1 22 HELIX 10 10 PHE A 298 VAL A 306 1 9 HELIX 11 11 ARG A 313 ALA A 317 5 5 HELIX 12 12 LEU A 318 GLY A 322 5 5 HELIX 13 13 THR A 324 GLU A 340 1 17 SHEET 1 A 2 ILE A 63 LYS A 67 0 SHEET 2 A 2 ASP A 72 LEU A 76 -1 O GLY A 73 N MET A 66 SHEET 1 B 5 SER A 97 VAL A 104 0 SHEET 2 B 5 SER A 108 ALA A 114 -1 O ILE A 110 N GLY A 103 SHEET 3 B 5 GLN A 120 HIS A 126 -1 O ILE A 125 N ASP A 109 SHEET 4 B 5 THR A 186 SER A 190 -1 O ILE A 187 N LYS A 124 SHEET 5 B 5 PRO A 179 SER A 183 -1 N ALA A 181 O VAL A 188 SHEET 1 C 2 ARG A 130 ILE A 131 0 SHEET 2 C 2 ASP A 141 TYR A 142 -1 O ASP A 141 N ILE A 131 SHEET 1 D 3 LEU A 195 PRO A 196 0 SHEET 2 D 3 ILE A 235 LYS A 241 -1 O ILE A 237 N LEU A 195 SHEET 3 D 3 ILE A 249 ILE A 255 -1 O ILE A 254 N LEU A 236 SHEET 1 E 2 LEU A 225 ILE A 226 0 SHEET 2 E 2 VAL A 262 SER A 263 -1 O VAL A 262 N ILE A 226 CISPEP 1 GLY A 296 PRO A 297 0 6.57 CISPEP 2 VAL A 306 GLY A 307 0 -11.70 CRYST1 117.398 117.398 71.291 90.00 90.00 120.00 H 3 9 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008518 0.004918 0.000000 0.00000 SCALE2 0.000000 0.009836 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014027 0.00000