data_4GZP # _entry.id 4GZP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4GZP pdb_00004gzp 10.2210/pdb4gzp/pdb RCSB RCSB074835 ? ? WWPDB D_1000074835 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4GZO . unspecified PDB 4GZQ . unspecified PDB 4GZS . unspecified PDB 4GZT . unspecified PDB 4GZW . unspecified PDB 4GZX . unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4GZP _pdbx_database_status.recvd_initial_deposition_date 2012-09-06 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Zhu, X.' 1 'Wilson, I.A.' 2 # _citation.id primary _citation.title 'Influenza virus neuraminidases with reduced enzymatic activity that avidly bind sialic Acid receptors.' _citation.journal_abbrev J.Virol. _citation.journal_volume 86 _citation.page_first 13371 _citation.page_last 13383 _citation.year 2012 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23015718 _citation.pdbx_database_id_DOI 10.1128/JVI.01426-12 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Zhu, X.' 1 ? primary 'McBride, R.' 2 ? primary 'Nycholat, C.M.' 3 ? primary 'Yu, W.' 4 ? primary 'Paulson, J.C.' 5 ? primary 'Wilson, I.A.' 6 ? # _cell.entry_id 4GZP _cell.length_a 110.123 _cell.length_b 110.123 _cell.length_c 78.274 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4GZP _symmetry.space_group_name_H-M 'P 4 21 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 90 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man Neuraminidase 43349.352 1 ? ? ectodomain ? 2 branched man ;alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose ; 910.823 1 ? ? ? ? 3 branched man '2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose' 424.401 1 ? ? ? ? 4 non-polymer man 2-acetamido-2-deoxy-beta-D-glucopyranose 221.208 2 ? ? ? ? 5 non-polymer syn 'CALCIUM ION' 40.078 2 ? ? ? ? 6 non-polymer syn '(3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid' 284.351 1 ? ? ? ? 7 water nat water 18.015 155 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSPSRAEYRNWSKPQCDITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLNNVHSNNTVRDRTPYR TLLMNELGVPFHLGTKQVCIAWSSSSCHDGKAWLHVCITGDDKNATASFIYNGRLVDSVVSWSKEILRTQESECVCINGT CTVVMTDGSASGKADTKILFIEEGKIVHTSTLSGSAQHVEECSCYPRYPGVRCVCRDNWKGSNRPIVDINIKDHSIVSSY VCSGLVGDTPRKNDSSSSSHCLDPNNEEGGHGVKGWAFDDGNDVWMGRTINETSRLGYETFKVIEGWSNPKSKLQINRQV IVDRGNRSGYSGIFSVEGKSCINRCFYVELIRGRKEETEVLWTSNSIVVFCGTSGTYGTGSWPDGADLNLMPI ; _entity_poly.pdbx_seq_one_letter_code_can ;GSPSRAEYRNWSKPQCDITGFAPFSKDNSIRLSAGGDIWVTREPYVSCDPDKCYQFALGQGTTLNNVHSNNTVRDRTPYR TLLMNELGVPFHLGTKQVCIAWSSSSCHDGKAWLHVCITGDDKNATASFIYNGRLVDSVVSWSKEILRTQESECVCINGT CTVVMTDGSASGKADTKILFIEEGKIVHTSTLSGSAQHVEECSCYPRYPGVRCVCRDNWKGSNRPIVDINIKDHSIVSSY VCSGLVGDTPRKNDSSSSSHCLDPNNEEGGHGVKGWAFDDGNDVWMGRTINETSRLGYETFKVIEGWSNPKSKLQINRQV IVDRGNRSGYSGIFSVEGKSCINRCFYVELIRGRKEETEVLWTSNSIVVFCGTSGTYGTGSWPDGADLNLMPI ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 PRO n 1 4 SER n 1 5 ARG n 1 6 ALA n 1 7 GLU n 1 8 TYR n 1 9 ARG n 1 10 ASN n 1 11 TRP n 1 12 SER n 1 13 LYS n 1 14 PRO n 1 15 GLN n 1 16 CYS n 1 17 ASP n 1 18 ILE n 1 19 THR n 1 20 GLY n 1 21 PHE n 1 22 ALA n 1 23 PRO n 1 24 PHE n 1 25 SER n 1 26 LYS n 1 27 ASP n 1 28 ASN n 1 29 SER n 1 30 ILE n 1 31 ARG n 1 32 LEU n 1 33 SER n 1 34 ALA n 1 35 GLY n 1 36 GLY n 1 37 ASP n 1 38 ILE n 1 39 TRP n 1 40 VAL n 1 41 THR n 1 42 ARG n 1 43 GLU n 1 44 PRO n 1 45 TYR n 1 46 VAL n 1 47 SER n 1 48 CYS n 1 49 ASP n 1 50 PRO n 1 51 ASP n 1 52 LYS n 1 53 CYS n 1 54 TYR n 1 55 GLN n 1 56 PHE n 1 57 ALA n 1 58 LEU n 1 59 GLY n 1 60 GLN n 1 61 GLY n 1 62 THR n 1 63 THR n 1 64 LEU n 1 65 ASN n 1 66 ASN n 1 67 VAL n 1 68 HIS n 1 69 SER n 1 70 ASN n 1 71 ASN n 1 72 THR n 1 73 VAL n 1 74 ARG n 1 75 ASP n 1 76 ARG n 1 77 THR n 1 78 PRO n 1 79 TYR n 1 80 ARG n 1 81 THR n 1 82 LEU n 1 83 LEU n 1 84 MET n 1 85 ASN n 1 86 GLU n 1 87 LEU n 1 88 GLY n 1 89 VAL n 1 90 PRO n 1 91 PHE n 1 92 HIS n 1 93 LEU n 1 94 GLY n 1 95 THR n 1 96 LYS n 1 97 GLN n 1 98 VAL n 1 99 CYS n 1 100 ILE n 1 101 ALA n 1 102 TRP n 1 103 SER n 1 104 SER n 1 105 SER n 1 106 SER n 1 107 CYS n 1 108 HIS n 1 109 ASP n 1 110 GLY n 1 111 LYS n 1 112 ALA n 1 113 TRP n 1 114 LEU n 1 115 HIS n 1 116 VAL n 1 117 CYS n 1 118 ILE n 1 119 THR n 1 120 GLY n 1 121 ASP n 1 122 ASP n 1 123 LYS n 1 124 ASN n 1 125 ALA n 1 126 THR n 1 127 ALA n 1 128 SER n 1 129 PHE n 1 130 ILE n 1 131 TYR n 1 132 ASN n 1 133 GLY n 1 134 ARG n 1 135 LEU n 1 136 VAL n 1 137 ASP n 1 138 SER n 1 139 VAL n 1 140 VAL n 1 141 SER n 1 142 TRP n 1 143 SER n 1 144 LYS n 1 145 GLU n 1 146 ILE n 1 147 LEU n 1 148 ARG n 1 149 THR n 1 150 GLN n 1 151 GLU n 1 152 SER n 1 153 GLU n 1 154 CYS n 1 155 VAL n 1 156 CYS n 1 157 ILE n 1 158 ASN n 1 159 GLY n 1 160 THR n 1 161 CYS n 1 162 THR n 1 163 VAL n 1 164 VAL n 1 165 MET n 1 166 THR n 1 167 ASP n 1 168 GLY n 1 169 SER n 1 170 ALA n 1 171 SER n 1 172 GLY n 1 173 LYS n 1 174 ALA n 1 175 ASP n 1 176 THR n 1 177 LYS n 1 178 ILE n 1 179 LEU n 1 180 PHE n 1 181 ILE n 1 182 GLU n 1 183 GLU n 1 184 GLY n 1 185 LYS n 1 186 ILE n 1 187 VAL n 1 188 HIS n 1 189 THR n 1 190 SER n 1 191 THR n 1 192 LEU n 1 193 SER n 1 194 GLY n 1 195 SER n 1 196 ALA n 1 197 GLN n 1 198 HIS n 1 199 VAL n 1 200 GLU n 1 201 GLU n 1 202 CYS n 1 203 SER n 1 204 CYS n 1 205 TYR n 1 206 PRO n 1 207 ARG n 1 208 TYR n 1 209 PRO n 1 210 GLY n 1 211 VAL n 1 212 ARG n 1 213 CYS n 1 214 VAL n 1 215 CYS n 1 216 ARG n 1 217 ASP n 1 218 ASN n 1 219 TRP n 1 220 LYS n 1 221 GLY n 1 222 SER n 1 223 ASN n 1 224 ARG n 1 225 PRO n 1 226 ILE n 1 227 VAL n 1 228 ASP n 1 229 ILE n 1 230 ASN n 1 231 ILE n 1 232 LYS n 1 233 ASP n 1 234 HIS n 1 235 SER n 1 236 ILE n 1 237 VAL n 1 238 SER n 1 239 SER n 1 240 TYR n 1 241 VAL n 1 242 CYS n 1 243 SER n 1 244 GLY n 1 245 LEU n 1 246 VAL n 1 247 GLY n 1 248 ASP n 1 249 THR n 1 250 PRO n 1 251 ARG n 1 252 LYS n 1 253 ASN n 1 254 ASP n 1 255 SER n 1 256 SER n 1 257 SER n 1 258 SER n 1 259 SER n 1 260 HIS n 1 261 CYS n 1 262 LEU n 1 263 ASP n 1 264 PRO n 1 265 ASN n 1 266 ASN n 1 267 GLU n 1 268 GLU n 1 269 GLY n 1 270 GLY n 1 271 HIS n 1 272 GLY n 1 273 VAL n 1 274 LYS n 1 275 GLY n 1 276 TRP n 1 277 ALA n 1 278 PHE n 1 279 ASP n 1 280 ASP n 1 281 GLY n 1 282 ASN n 1 283 ASP n 1 284 VAL n 1 285 TRP n 1 286 MET n 1 287 GLY n 1 288 ARG n 1 289 THR n 1 290 ILE n 1 291 ASN n 1 292 GLU n 1 293 THR n 1 294 SER n 1 295 ARG n 1 296 LEU n 1 297 GLY n 1 298 TYR n 1 299 GLU n 1 300 THR n 1 301 PHE n 1 302 LYS n 1 303 VAL n 1 304 ILE n 1 305 GLU n 1 306 GLY n 1 307 TRP n 1 308 SER n 1 309 ASN n 1 310 PRO n 1 311 LYS n 1 312 SER n 1 313 LYS n 1 314 LEU n 1 315 GLN n 1 316 ILE n 1 317 ASN n 1 318 ARG n 1 319 GLN n 1 320 VAL n 1 321 ILE n 1 322 VAL n 1 323 ASP n 1 324 ARG n 1 325 GLY n 1 326 ASN n 1 327 ARG n 1 328 SER n 1 329 GLY n 1 330 TYR n 1 331 SER n 1 332 GLY n 1 333 ILE n 1 334 PHE n 1 335 SER n 1 336 VAL n 1 337 GLU n 1 338 GLY n 1 339 LYS n 1 340 SER n 1 341 CYS n 1 342 ILE n 1 343 ASN n 1 344 ARG n 1 345 CYS n 1 346 PHE n 1 347 TYR n 1 348 VAL n 1 349 GLU n 1 350 LEU n 1 351 ILE n 1 352 ARG n 1 353 GLY n 1 354 ARG n 1 355 LYS n 1 356 GLU n 1 357 GLU n 1 358 THR n 1 359 GLU n 1 360 VAL n 1 361 LEU n 1 362 TRP n 1 363 THR n 1 364 SER n 1 365 ASN n 1 366 SER n 1 367 ILE n 1 368 VAL n 1 369 VAL n 1 370 PHE n 1 371 CYS n 1 372 GLY n 1 373 THR n 1 374 SER n 1 375 GLY n 1 376 THR n 1 377 TYR n 1 378 GLY n 1 379 THR n 1 380 GLY n 1 381 SER n 1 382 TRP n 1 383 PRO n 1 384 ASP n 1 385 GLY n 1 386 ALA n 1 387 ASP n 1 388 LEU n 1 389 ASN n 1 390 LEU n 1 391 MET n 1 392 PRO n 1 393 ILE n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene ? _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'A/Tanzania/205/2010(H3N2)' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Influenza A virus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 119210 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Trichoplusia Ni' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 7111 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name PFASTBACHT-A _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name PDB _struct_ref.db_code 4GZP _struct_ref.pdbx_db_accession 4GZP _struct_ref.entity_id 1 _struct_ref.pdbx_align_begin ? _struct_ref.pdbx_seq_one_letter_code ? _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4GZP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 393 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession 4GZP _struct_ref_seq.db_align_beg 77 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 469 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 77 _struct_ref_seq.pdbx_auth_seq_align_end 469 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 BMA 'D-saccharide, beta linking' . beta-D-mannopyranose 'beta-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 G39 non-polymer . '(3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid' 'Oseltamivir carboxylate' 'C14 H24 N2 O4' 284.351 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MAN 'D-saccharide, alpha linking' . alpha-D-mannopyranose 'alpha-D-mannose; D-mannose; mannose' 'C6 H12 O6' 180.156 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 NAG 'D-saccharide, beta linking' . 2-acetamido-2-deoxy-beta-D-glucopyranose ;N-acetyl-beta-D-glucosamine; 2-acetamido-2-deoxy-beta-D-glucose; 2-acetamido-2-deoxy-D-glucose; 2-acetamido-2-deoxy-glucose; N-ACETYL-D-GLUCOSAMINE ; 'C8 H15 N O6' 221.208 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4GZP _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_percent_sol 55.06 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION' _exptl_crystal_grow.temp 295 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.1 M Hepes, 17-25% PEG 8000, pH 7.5, VAPOR DIFFUSION, temperature 295K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2011-05-13 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'liquid nitrogen-cooled double crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9795 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SSRL BEAMLINE BL12-2' _diffrn_source.pdbx_synchrotron_site SSRL _diffrn_source.pdbx_synchrotron_beamline BL12-2 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9795 # _reflns.entry_id 4GZP _reflns.observed_criterion_sigma_I -3 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 2.3 _reflns.number_obs 20518 _reflns.number_all ? _reflns.percent_possible_obs 92.9 _reflns.pdbx_Rmerge_I_obs 0.110 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 25.8 _reflns.B_iso_Wilson_estimate 37.6 _reflns.pdbx_redundancy 9.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.30 _reflns_shell.d_res_low 2.38 _reflns_shell.percent_possible_all 70.5 _reflns_shell.Rmerge_I_obs 0.259 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 5.8 _reflns_shell.pdbx_redundancy 7.0 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4GZP _refine.ls_number_reflns_obs 19378 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 49.25 _refine.ls_d_res_high 2.30 _refine.ls_percent_reflns_obs 92.58 _refine.ls_R_factor_obs 0.21517 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.21178 _refine.ls_R_factor_R_free 0.27537 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1049 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.940 _refine.correlation_coeff_Fo_to_Fc_free 0.904 _refine.B_iso_mean 38.824 _refine.aniso_B[1][1] -5.92 _refine.aniso_B[2][2] -5.92 _refine.aniso_B[3][3] 11.83 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.40 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model 'PDB entry 4GZO' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.377 _refine.pdbx_overall_ESU_R_Free 0.274 _refine.overall_SU_ML 0.227 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 9.453 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 3002 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 139 _refine_hist.number_atoms_solvent 155 _refine_hist.number_atoms_total 3296 _refine_hist.d_res_high 2.30 _refine_hist.d_res_low 49.25 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.012 0.021 ? 3265 ? 'X-RAY DIFFRACTION' r_bond_other_d ? ? ? ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.512 1.994 ? 4451 ? 'X-RAY DIFFRACTION' r_angle_other_deg ? ? ? ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 7.143 5.000 ? 387 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 33.506 23.929 ? 140 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 16.484 15.000 ? 503 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 14.619 15.000 ? 21 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.098 0.200 ? 511 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.005 0.021 ? 2431 ? 'X-RAY DIFFRACTION' r_gen_planes_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it 0.590 1.500 ? 1917 ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1.113 2.000 ? 3102 ? 'X-RAY DIFFRACTION' r_scbond_it 1.720 3.000 ? 1348 ? 'X-RAY DIFFRACTION' r_scangle_it 2.831 4.500 ? 1349 ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.3 _refine_ls_shell.d_res_low 2.356 _refine_ls_shell.number_reflns_R_work 1037 _refine_ls_shell.R_factor_R_work 0.245 _refine_ls_shell.percent_reflns_obs 69.34 _refine_ls_shell.R_factor_R_free 0.332 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 60 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4GZP _struct.title 'N2 Neuraminidase of A/Tanzania/205/2010 H3N2 in complex with oseltamivir carboxylate' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4GZP _struct_keywords.pdbx_keywords 'VIRAL PROTEIN' _struct_keywords.text 'beta-propella, influenza virus, neuraminidase, hemagglutinin, hemadsorption, viral infection, sialic acid receptor, viral protein' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? E N N 4 ? F N N 5 ? G N N 5 ? H N N 6 ? I N N 7 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 28 ? SER A 33 ? ASN A 104 SER A 109 1 ? 6 HELX_P HELX_P2 2 ASN A 66 ? ASN A 70 ? ASN A 142 ASN A 146 5 ? 5 HELX_P HELX_P3 3 ASP A 121 ? ASN A 124 ? ASP A 197 ASN A 200 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 16 SG ? ? ? 1_555 A CYS 341 SG ? ? A CYS 92 A CYS 417 1_555 ? ? ? ? ? ? ? 2.077 ? ? disulf2 disulf ? ? A CYS 48 SG ? ? ? 1_555 A CYS 53 SG ? ? A CYS 124 A CYS 129 1_555 ? ? ? ? ? ? ? 2.032 ? ? disulf3 disulf ? ? A CYS 99 SG ? ? ? 1_555 A CYS 117 SG ? ? A CYS 175 A CYS 193 1_555 ? ? ? ? ? ? ? 2.010 ? ? disulf4 disulf ? ? A CYS 107 SG ? ? ? 1_555 A CYS 154 SG ? ? A CYS 183 A CYS 230 1_555 ? ? ? ? ? ? ? 2.077 ? ? disulf5 disulf ? ? A CYS 156 SG ? ? ? 1_555 A CYS 161 SG ? ? A CYS 232 A CYS 237 1_555 ? ? ? ? ? ? ? 2.045 ? ? disulf6 disulf ? ? A CYS 202 SG ? ? ? 1_555 A CYS 215 SG ? ? A CYS 278 A CYS 291 1_555 ? ? ? ? ? ? ? 2.071 ? ? disulf7 disulf ? ? A CYS 204 SG ? ? ? 1_555 A CYS 213 SG ? ? A CYS 280 A CYS 289 1_555 ? ? ? ? ? ? ? 2.069 ? ? disulf8 disulf ? ? A CYS 242 SG ? ? ? 1_555 A CYS 261 SG ? ? A CYS 318 A CYS 337 1_555 ? ? ? ? ? ? ? 2.070 ? ? disulf9 disulf ? ? A CYS 345 SG ? ? ? 1_555 A CYS 371 SG ? ? A CYS 421 A CYS 447 1_555 ? ? ? ? ? ? ? 2.087 ? ? covale1 covale one ? A ASN 70 ND2 ? ? ? 1_555 C NAG . C1 ? ? A ASN 146 C NAG 1 1_555 ? ? ? ? ? ? ? 1.453 ? N-Glycosylation covale2 covale one ? A ASN 124 ND2 ? ? ? 1_555 B NAG . C1 ? ? A ASN 200 B NAG 1 1_555 ? ? ? ? ? ? ? 1.440 ? N-Glycosylation covale3 covale one ? A ASN 158 ND2 ? ? ? 1_555 D NAG . C1 ? ? A ASN 234 A NAG 508 1_555 ? ? ? ? ? ? ? 1.453 ? N-Glycosylation covale4 covale one ? A ASN 291 ND2 ? ? ? 1_555 E NAG . C1 ? ? A ASN 367 A NAG 509 1_555 ? ? ? ? ? ? ? 1.450 ? N-Glycosylation covale5 covale both ? B NAG . O4 ? ? ? 1_555 B NAG . C1 ? ? B NAG 1 B NAG 2 1_555 ? ? ? ? ? ? ? 1.448 ? ? covale6 covale both ? B NAG . O4 ? ? ? 1_555 B BMA . C1 ? ? B NAG 2 B BMA 3 1_555 ? ? ? ? ? ? ? 1.436 ? ? covale7 covale both ? B BMA . O3 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 4 1_555 ? ? ? ? ? ? ? 1.442 ? ? covale8 covale both ? B BMA . O6 ? ? ? 1_555 B MAN . C1 ? ? B BMA 3 B MAN 5 1_555 ? ? ? ? ? ? ? 1.458 ? ? covale9 covale both ? C NAG . O4 ? ? ? 1_555 C NAG . C1 ? ? C NAG 1 C NAG 2 1_555 ? ? ? ? ? ? ? 1.455 ? ? metalc1 metalc ? ? A ASP 217 O ? ? ? 1_555 F CA . CA ? ? A ASP 293 A CA 510 1_555 ? ? ? ? ? ? ? 2.141 ? ? metalc2 metalc ? ? A GLY 221 O ? ? ? 1_555 F CA . CA ? ? A GLY 297 A CA 510 1_555 ? ? ? ? ? ? ? 2.369 ? ? metalc3 metalc ? ? A ASP 248 OD2 ? ? ? 1_555 F CA . CA ? ? A ASP 324 A CA 510 1_555 ? ? ? ? ? ? ? 2.292 ? ? metalc4 metalc ? ? A GLY 269 O ? ? ? 1_555 F CA . CA ? ? A GLY 345 A CA 510 1_555 ? ? ? ? ? ? ? 2.474 ? ? metalc5 metalc ? ? A HIS 271 O ? ? ? 1_555 F CA . CA ? ? A HIS 347 A CA 510 1_555 ? ? ? ? ? ? ? 2.356 ? ? metalc6 metalc ? ? F CA . CA ? ? ? 1_555 I HOH . O ? ? A CA 510 A HOH 684 1_555 ? ? ? ? ? ? ? 2.200 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? metalc ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 TYR 208 A . ? TYR 284 A PRO 209 A ? PRO 285 A 1 11.75 2 THR 249 A . ? THR 325 A PRO 250 A ? PRO 326 A 1 -3.74 3 ARG 354 A . ? ARG 430 A LYS 355 A ? LYS 431 A 1 -5.84 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? C ? 4 ? D ? 4 ? E ? 4 ? F ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? anti-parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLY A 20 ? LYS A 26 ? GLY A 96 LYS A 102 A 2 THR A 363 ? THR A 373 ? THR A 439 THR A 449 A 3 ILE A 342 ? GLY A 353 ? ILE A 418 GLY A 429 A 4 SER A 331 ? GLU A 337 ? SER A 407 GLU A 413 B 1 TRP A 39 ? CYS A 48 ? TRP A 115 CYS A 124 B 2 CYS A 53 ? THR A 63 ? CYS A 129 THR A 139 B 3 THR A 81 ? GLU A 86 ? THR A 157 GLU A 162 B 4 LYS A 96 ? ILE A 100 ? LYS A 172 ILE A 176 C 1 SER A 103 ? HIS A 108 ? SER A 179 HIS A 184 C 2 TRP A 113 ? THR A 119 ? TRP A 189 THR A 195 C 3 THR A 126 ? TYR A 131 ? THR A 202 TYR A 207 C 4 ARG A 134 ? VAL A 140 ? ARG A 210 VAL A 216 D 1 VAL A 155 ? ILE A 157 ? VAL A 231 ILE A 233 D 2 THR A 160 ? GLY A 168 ? THR A 236 GLY A 244 D 3 ALA A 174 ? GLU A 182 ? ALA A 250 GLU A 258 D 4 LYS A 185 ? THR A 191 ? LYS A 261 THR A 267 E 1 GLU A 200 ? ARG A 207 ? GLU A 276 ARG A 283 E 2 GLY A 210 ? ARG A 216 ? GLY A 286 ARG A 292 E 3 PRO A 225 ? ILE A 229 ? PRO A 301 ILE A 305 E 4 ILE A 236 ? TYR A 240 ? ILE A 312 TYR A 316 F 1 ALA A 277 ? ASP A 280 ? ALA A 353 ASP A 356 F 2 ASP A 283 ? ARG A 288 ? ASP A 359 ARG A 364 F 3 LEU A 296 ? ILE A 304 ? LEU A 372 ILE A 380 F 4 LEU A 314 ? ARG A 327 ? LEU A 390 ARG A 403 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ALA A 22 ? N ALA A 98 O CYS A 371 ? O CYS A 447 A 2 3 O SER A 366 ? O SER A 442 N LEU A 350 ? N LEU A 426 A 3 4 O ASN A 343 ? O ASN A 419 N VAL A 336 ? N VAL A 412 B 1 2 N TYR A 45 ? N TYR A 121 O PHE A 56 ? O PHE A 132 B 2 3 N ALA A 57 ? N ALA A 133 O LEU A 83 ? O LEU A 159 B 3 4 N LEU A 82 ? N LEU A 158 O VAL A 98 ? O VAL A 174 C 1 2 N CYS A 107 ? N CYS A 183 O LEU A 114 ? O LEU A 190 C 2 3 N THR A 119 ? N THR A 195 O THR A 126 ? O THR A 202 C 3 4 N TYR A 131 ? N TYR A 207 O ARG A 134 ? O ARG A 210 D 1 2 N VAL A 155 ? N VAL A 231 O THR A 162 ? O THR A 238 D 2 3 N ASP A 167 ? N ASP A 243 O ASP A 175 ? O ASP A 251 D 3 4 N ILE A 178 ? N ILE A 254 O SER A 190 ? O SER A 266 E 1 2 N TYR A 205 ? N TYR A 281 O ARG A 212 ? O ARG A 288 E 2 3 N CYS A 215 ? N CYS A 291 O PRO A 225 ? O PRO A 301 E 3 4 N ASP A 228 ? N ASP A 304 O VAL A 237 ? O VAL A 313 F 1 2 N ASP A 280 ? N ASP A 356 O ASP A 283 ? O ASP A 359 F 2 3 N ARG A 288 ? N ARG A 364 O GLU A 299 ? O GLU A 375 F 3 4 N GLY A 297 ? N GLY A 373 O ASN A 326 ? O ASN A 402 # _database_PDB_matrix.entry_id 4GZP _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4GZP _atom_sites.fract_transf_matrix[1][1] 0.009081 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009081 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012776 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_ _database_PDB_caveat.text 'THERE IS A DISCREPANCY IN LIGAND G39 GEOMETRY AROUND C2=C7 DOUBLE BOND.' # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 77 ? ? ? A . n A 1 2 SER 2 78 ? ? ? A . n A 1 3 PRO 3 79 ? ? ? A . n A 1 4 SER 4 80 ? ? ? A . n A 1 5 ARG 5 81 ? ? ? A . n A 1 6 ALA 6 82 82 ALA ALA A . n A 1 7 GLU 7 83 83 GLU GLU A . n A 1 8 TYR 8 84 84 TYR TYR A . n A 1 9 ARG 9 85 85 ARG ARG A . n A 1 10 ASN 10 86 86 ASN ASN A . n A 1 11 TRP 11 87 87 TRP TRP A . n A 1 12 SER 12 88 88 SER SER A . n A 1 13 LYS 13 89 89 LYS LYS A . n A 1 14 PRO 14 90 90 PRO PRO A . n A 1 15 GLN 15 91 91 GLN GLN A . n A 1 16 CYS 16 92 92 CYS CYS A . n A 1 17 ASP 17 93 93 ASP ASP A . n A 1 18 ILE 18 94 94 ILE ILE A . n A 1 19 THR 19 95 95 THR THR A . n A 1 20 GLY 20 96 96 GLY GLY A . n A 1 21 PHE 21 97 97 PHE PHE A . n A 1 22 ALA 22 98 98 ALA ALA A . n A 1 23 PRO 23 99 99 PRO PRO A . n A 1 24 PHE 24 100 100 PHE PHE A . n A 1 25 SER 25 101 101 SER SER A . n A 1 26 LYS 26 102 102 LYS LYS A . n A 1 27 ASP 27 103 103 ASP ASP A . n A 1 28 ASN 28 104 104 ASN ASN A . n A 1 29 SER 29 105 105 SER SER A . n A 1 30 ILE 30 106 106 ILE ILE A . n A 1 31 ARG 31 107 107 ARG ARG A . n A 1 32 LEU 32 108 108 LEU LEU A . n A 1 33 SER 33 109 109 SER SER A . n A 1 34 ALA 34 110 110 ALA ALA A . n A 1 35 GLY 35 111 111 GLY GLY A . n A 1 36 GLY 36 112 112 GLY GLY A . n A 1 37 ASP 37 113 113 ASP ASP A . n A 1 38 ILE 38 114 114 ILE ILE A . n A 1 39 TRP 39 115 115 TRP TRP A . n A 1 40 VAL 40 116 116 VAL VAL A . n A 1 41 THR 41 117 117 THR THR A . n A 1 42 ARG 42 118 118 ARG ARG A . n A 1 43 GLU 43 119 119 GLU GLU A . n A 1 44 PRO 44 120 120 PRO PRO A . n A 1 45 TYR 45 121 121 TYR TYR A . n A 1 46 VAL 46 122 122 VAL VAL A . n A 1 47 SER 47 123 123 SER SER A . n A 1 48 CYS 48 124 124 CYS CYS A . n A 1 49 ASP 49 125 125 ASP ASP A . n A 1 50 PRO 50 126 126 PRO PRO A . n A 1 51 ASP 51 127 127 ASP ASP A . n A 1 52 LYS 52 128 128 LYS LYS A . n A 1 53 CYS 53 129 129 CYS CYS A . n A 1 54 TYR 54 130 130 TYR TYR A . n A 1 55 GLN 55 131 131 GLN GLN A . n A 1 56 PHE 56 132 132 PHE PHE A . n A 1 57 ALA 57 133 133 ALA ALA A . n A 1 58 LEU 58 134 134 LEU LEU A . n A 1 59 GLY 59 135 135 GLY GLY A . n A 1 60 GLN 60 136 136 GLN GLN A . n A 1 61 GLY 61 137 137 GLY GLY A . n A 1 62 THR 62 138 138 THR THR A . n A 1 63 THR 63 139 139 THR THR A . n A 1 64 LEU 64 140 140 LEU LEU A . n A 1 65 ASN 65 141 141 ASN ASN A . n A 1 66 ASN 66 142 142 ASN ASN A . n A 1 67 VAL 67 143 143 VAL VAL A . n A 1 68 HIS 68 144 144 HIS HIS A . n A 1 69 SER 69 145 145 SER SER A . n A 1 70 ASN 70 146 146 ASN ASN A . n A 1 71 ASN 71 147 147 ASN ASN A . n A 1 72 THR 72 148 148 THR THR A . n A 1 73 VAL 73 149 149 VAL VAL A . n A 1 74 ARG 74 150 150 ARG ARG A . n A 1 75 ASP 75 151 151 ASP ASP A . n A 1 76 ARG 76 152 152 ARG ARG A . n A 1 77 THR 77 153 153 THR THR A . n A 1 78 PRO 78 154 154 PRO PRO A . n A 1 79 TYR 79 155 155 TYR TYR A . n A 1 80 ARG 80 156 156 ARG ARG A . n A 1 81 THR 81 157 157 THR THR A . n A 1 82 LEU 82 158 158 LEU LEU A . n A 1 83 LEU 83 159 159 LEU LEU A . n A 1 84 MET 84 160 160 MET MET A . n A 1 85 ASN 85 161 161 ASN ASN A . n A 1 86 GLU 86 162 162 GLU GLU A . n A 1 87 LEU 87 163 163 LEU LEU A . n A 1 88 GLY 88 164 164 GLY GLY A . n A 1 89 VAL 89 165 165 VAL VAL A . n A 1 90 PRO 90 166 166 PRO PRO A . n A 1 91 PHE 91 167 167 PHE PHE A . n A 1 92 HIS 92 168 168 HIS HIS A . n A 1 93 LEU 93 169 169 LEU LEU A . n A 1 94 GLY 94 170 170 GLY GLY A . n A 1 95 THR 95 171 171 THR THR A . n A 1 96 LYS 96 172 172 LYS LYS A . n A 1 97 GLN 97 173 173 GLN GLN A . n A 1 98 VAL 98 174 174 VAL VAL A . n A 1 99 CYS 99 175 175 CYS CYS A . n A 1 100 ILE 100 176 176 ILE ILE A . n A 1 101 ALA 101 177 177 ALA ALA A . n A 1 102 TRP 102 178 178 TRP TRP A . n A 1 103 SER 103 179 179 SER SER A . n A 1 104 SER 104 180 180 SER SER A . n A 1 105 SER 105 181 181 SER SER A . n A 1 106 SER 106 182 182 SER SER A . n A 1 107 CYS 107 183 183 CYS CYS A . n A 1 108 HIS 108 184 184 HIS HIS A . n A 1 109 ASP 109 185 185 ASP ASP A . n A 1 110 GLY 110 186 186 GLY GLY A . n A 1 111 LYS 111 187 187 LYS LYS A . n A 1 112 ALA 112 188 188 ALA ALA A . n A 1 113 TRP 113 189 189 TRP TRP A . n A 1 114 LEU 114 190 190 LEU LEU A . n A 1 115 HIS 115 191 191 HIS HIS A . n A 1 116 VAL 116 192 192 VAL VAL A . n A 1 117 CYS 117 193 193 CYS CYS A . n A 1 118 ILE 118 194 194 ILE ILE A . n A 1 119 THR 119 195 195 THR THR A . n A 1 120 GLY 120 196 196 GLY GLY A . n A 1 121 ASP 121 197 197 ASP ASP A . n A 1 122 ASP 122 198 198 ASP ASP A . n A 1 123 LYS 123 199 199 LYS LYS A . n A 1 124 ASN 124 200 200 ASN ASN A . n A 1 125 ALA 125 201 201 ALA ALA A . n A 1 126 THR 126 202 202 THR THR A . n A 1 127 ALA 127 203 203 ALA ALA A . n A 1 128 SER 128 204 204 SER SER A . n A 1 129 PHE 129 205 205 PHE PHE A . n A 1 130 ILE 130 206 206 ILE ILE A . n A 1 131 TYR 131 207 207 TYR TYR A . n A 1 132 ASN 132 208 208 ASN ASN A . n A 1 133 GLY 133 209 209 GLY GLY A . n A 1 134 ARG 134 210 210 ARG ARG A . n A 1 135 LEU 135 211 211 LEU LEU A . n A 1 136 VAL 136 212 212 VAL VAL A . n A 1 137 ASP 137 213 213 ASP ASP A . n A 1 138 SER 138 214 214 SER SER A . n A 1 139 VAL 139 215 215 VAL VAL A . n A 1 140 VAL 140 216 216 VAL VAL A . n A 1 141 SER 141 217 217 SER SER A . n A 1 142 TRP 142 218 218 TRP TRP A . n A 1 143 SER 143 219 219 SER SER A . n A 1 144 LYS 144 220 220 LYS LYS A . n A 1 145 GLU 145 221 221 GLU GLU A . n A 1 146 ILE 146 222 222 ILE ILE A . n A 1 147 LEU 147 223 223 LEU LEU A . n A 1 148 ARG 148 224 224 ARG ARG A . n A 1 149 THR 149 225 225 THR THR A . n A 1 150 GLN 150 226 226 GLN GLN A . n A 1 151 GLU 151 227 227 GLU GLU A . n A 1 152 SER 152 228 228 SER SER A . n A 1 153 GLU 153 229 229 GLU GLU A . n A 1 154 CYS 154 230 230 CYS CYS A . n A 1 155 VAL 155 231 231 VAL VAL A . n A 1 156 CYS 156 232 232 CYS CYS A . n A 1 157 ILE 157 233 233 ILE ILE A . n A 1 158 ASN 158 234 234 ASN ASN A . n A 1 159 GLY 159 235 235 GLY GLY A . n A 1 160 THR 160 236 236 THR THR A . n A 1 161 CYS 161 237 237 CYS CYS A . n A 1 162 THR 162 238 238 THR THR A . n A 1 163 VAL 163 239 239 VAL VAL A . n A 1 164 VAL 164 240 240 VAL VAL A . n A 1 165 MET 165 241 241 MET MET A . n A 1 166 THR 166 242 242 THR THR A . n A 1 167 ASP 167 243 243 ASP ASP A . n A 1 168 GLY 168 244 244 GLY GLY A . n A 1 169 SER 169 245 245 SER SER A . n A 1 170 ALA 170 246 246 ALA ALA A . n A 1 171 SER 171 247 247 SER SER A . n A 1 172 GLY 172 248 248 GLY GLY A . n A 1 173 LYS 173 249 249 LYS LYS A . n A 1 174 ALA 174 250 250 ALA ALA A . n A 1 175 ASP 175 251 251 ASP ASP A . n A 1 176 THR 176 252 252 THR THR A . n A 1 177 LYS 177 253 253 LYS LYS A . n A 1 178 ILE 178 254 254 ILE ILE A . n A 1 179 LEU 179 255 255 LEU LEU A . n A 1 180 PHE 180 256 256 PHE PHE A . n A 1 181 ILE 181 257 257 ILE ILE A . n A 1 182 GLU 182 258 258 GLU GLU A . n A 1 183 GLU 183 259 259 GLU GLU A . n A 1 184 GLY 184 260 260 GLY GLY A . n A 1 185 LYS 185 261 261 LYS LYS A . n A 1 186 ILE 186 262 262 ILE ILE A . n A 1 187 VAL 187 263 263 VAL VAL A . n A 1 188 HIS 188 264 264 HIS HIS A . n A 1 189 THR 189 265 265 THR THR A . n A 1 190 SER 190 266 266 SER SER A . n A 1 191 THR 191 267 267 THR THR A . n A 1 192 LEU 192 268 268 LEU LEU A . n A 1 193 SER 193 269 269 SER SER A . n A 1 194 GLY 194 270 270 GLY GLY A . n A 1 195 SER 195 271 271 SER SER A . n A 1 196 ALA 196 272 272 ALA ALA A . n A 1 197 GLN 197 273 273 GLN GLN A . n A 1 198 HIS 198 274 274 HIS HIS A . n A 1 199 VAL 199 275 275 VAL VAL A . n A 1 200 GLU 200 276 276 GLU GLU A . n A 1 201 GLU 201 277 277 GLU GLU A . n A 1 202 CYS 202 278 278 CYS CYS A . n A 1 203 SER 203 279 279 SER SER A . n A 1 204 CYS 204 280 280 CYS CYS A . n A 1 205 TYR 205 281 281 TYR TYR A . n A 1 206 PRO 206 282 282 PRO PRO A . n A 1 207 ARG 207 283 283 ARG ARG A . n A 1 208 TYR 208 284 284 TYR TYR A . n A 1 209 PRO 209 285 285 PRO PRO A . n A 1 210 GLY 210 286 286 GLY GLY A . n A 1 211 VAL 211 287 287 VAL VAL A . n A 1 212 ARG 212 288 288 ARG ARG A . n A 1 213 CYS 213 289 289 CYS CYS A . n A 1 214 VAL 214 290 290 VAL VAL A . n A 1 215 CYS 215 291 291 CYS CYS A . n A 1 216 ARG 216 292 292 ARG ARG A . n A 1 217 ASP 217 293 293 ASP ASP A . n A 1 218 ASN 218 294 294 ASN ASN A . n A 1 219 TRP 219 295 295 TRP TRP A . n A 1 220 LYS 220 296 296 LYS LYS A . n A 1 221 GLY 221 297 297 GLY GLY A . n A 1 222 SER 222 298 298 SER SER A . n A 1 223 ASN 223 299 299 ASN ASN A . n A 1 224 ARG 224 300 300 ARG ARG A . n A 1 225 PRO 225 301 301 PRO PRO A . n A 1 226 ILE 226 302 302 ILE ILE A . n A 1 227 VAL 227 303 303 VAL VAL A . n A 1 228 ASP 228 304 304 ASP ASP A . n A 1 229 ILE 229 305 305 ILE ILE A . n A 1 230 ASN 230 306 306 ASN ASN A . n A 1 231 ILE 231 307 307 ILE ILE A . n A 1 232 LYS 232 308 308 LYS LYS A . n A 1 233 ASP 233 309 309 ASP ASP A . n A 1 234 HIS 234 310 310 HIS HIS A . n A 1 235 SER 235 311 311 SER SER A . n A 1 236 ILE 236 312 312 ILE ILE A . n A 1 237 VAL 237 313 313 VAL VAL A . n A 1 238 SER 238 314 314 SER SER A . n A 1 239 SER 239 315 315 SER SER A . n A 1 240 TYR 240 316 316 TYR TYR A . n A 1 241 VAL 241 317 317 VAL VAL A . n A 1 242 CYS 242 318 318 CYS CYS A . n A 1 243 SER 243 319 319 SER SER A . n A 1 244 GLY 244 320 320 GLY GLY A . n A 1 245 LEU 245 321 321 LEU LEU A . n A 1 246 VAL 246 322 322 VAL VAL A . n A 1 247 GLY 247 323 323 GLY GLY A . n A 1 248 ASP 248 324 324 ASP ASP A . n A 1 249 THR 249 325 325 THR THR A . n A 1 250 PRO 250 326 326 PRO PRO A . n A 1 251 ARG 251 327 327 ARG ARG A . n A 1 252 LYS 252 328 328 LYS LYS A . n A 1 253 ASN 253 329 329 ASN ASN A . n A 1 254 ASP 254 330 330 ASP ASP A . n A 1 255 SER 255 331 331 SER SER A . n A 1 256 SER 256 332 332 SER SER A . n A 1 257 SER 257 333 333 SER SER A . n A 1 258 SER 258 334 334 SER SER A . n A 1 259 SER 259 335 335 SER SER A . n A 1 260 HIS 260 336 336 HIS HIS A . n A 1 261 CYS 261 337 337 CYS CYS A . n A 1 262 LEU 262 338 338 LEU LEU A . n A 1 263 ASP 263 339 339 ASP ASP A . n A 1 264 PRO 264 340 340 PRO PRO A . n A 1 265 ASN 265 341 341 ASN ASN A . n A 1 266 ASN 266 342 342 ASN ASN A . n A 1 267 GLU 267 343 343 GLU GLU A . n A 1 268 GLU 268 344 344 GLU GLU A . n A 1 269 GLY 269 345 345 GLY GLY A . n A 1 270 GLY 270 346 346 GLY GLY A . n A 1 271 HIS 271 347 347 HIS HIS A . n A 1 272 GLY 272 348 348 GLY GLY A . n A 1 273 VAL 273 349 349 VAL VAL A . n A 1 274 LYS 274 350 350 LYS LYS A . n A 1 275 GLY 275 351 351 GLY GLY A . n A 1 276 TRP 276 352 352 TRP TRP A . n A 1 277 ALA 277 353 353 ALA ALA A . n A 1 278 PHE 278 354 354 PHE PHE A . n A 1 279 ASP 279 355 355 ASP ASP A . n A 1 280 ASP 280 356 356 ASP ASP A . n A 1 281 GLY 281 357 357 GLY GLY A . n A 1 282 ASN 282 358 358 ASN ASN A . n A 1 283 ASP 283 359 359 ASP ASP A . n A 1 284 VAL 284 360 360 VAL VAL A . n A 1 285 TRP 285 361 361 TRP TRP A . n A 1 286 MET 286 362 362 MET MET A . n A 1 287 GLY 287 363 363 GLY GLY A . n A 1 288 ARG 288 364 364 ARG ARG A . n A 1 289 THR 289 365 365 THR THR A . n A 1 290 ILE 290 366 366 ILE ILE A . n A 1 291 ASN 291 367 367 ASN ASN A . n A 1 292 GLU 292 368 368 GLU GLU A . n A 1 293 THR 293 369 369 THR THR A . n A 1 294 SER 294 370 370 SER SER A . n A 1 295 ARG 295 371 371 ARG ARG A . n A 1 296 LEU 296 372 372 LEU LEU A . n A 1 297 GLY 297 373 373 GLY GLY A . n A 1 298 TYR 298 374 374 TYR TYR A . n A 1 299 GLU 299 375 375 GLU GLU A . n A 1 300 THR 300 376 376 THR THR A . n A 1 301 PHE 301 377 377 PHE PHE A . n A 1 302 LYS 302 378 378 LYS LYS A . n A 1 303 VAL 303 379 379 VAL VAL A . n A 1 304 ILE 304 380 380 ILE ILE A . n A 1 305 GLU 305 381 381 GLU GLU A . n A 1 306 GLY 306 382 382 GLY GLY A . n A 1 307 TRP 307 383 383 TRP TRP A . n A 1 308 SER 308 384 384 SER SER A . n A 1 309 ASN 309 385 385 ASN ASN A . n A 1 310 PRO 310 386 386 PRO PRO A . n A 1 311 LYS 311 387 387 LYS LYS A . n A 1 312 SER 312 388 388 SER SER A . n A 1 313 LYS 313 389 389 LYS LYS A . n A 1 314 LEU 314 390 390 LEU LEU A . n A 1 315 GLN 315 391 391 GLN GLN A . n A 1 316 ILE 316 392 392 ILE ILE A . n A 1 317 ASN 317 393 393 ASN ASN A . n A 1 318 ARG 318 394 394 ARG ARG A . n A 1 319 GLN 319 395 395 GLN GLN A . n A 1 320 VAL 320 396 396 VAL VAL A . n A 1 321 ILE 321 397 397 ILE ILE A . n A 1 322 VAL 322 398 398 VAL VAL A . n A 1 323 ASP 323 399 399 ASP ASP A . n A 1 324 ARG 324 400 400 ARG ARG A . n A 1 325 GLY 325 401 401 GLY GLY A . n A 1 326 ASN 326 402 402 ASN ASN A . n A 1 327 ARG 327 403 403 ARG ARG A . n A 1 328 SER 328 404 404 SER SER A . n A 1 329 GLY 329 405 405 GLY GLY A . n A 1 330 TYR 330 406 406 TYR TYR A . n A 1 331 SER 331 407 407 SER SER A . n A 1 332 GLY 332 408 408 GLY GLY A . n A 1 333 ILE 333 409 409 ILE ILE A . n A 1 334 PHE 334 410 410 PHE PHE A . n A 1 335 SER 335 411 411 SER SER A . n A 1 336 VAL 336 412 412 VAL VAL A . n A 1 337 GLU 337 413 413 GLU GLU A . n A 1 338 GLY 338 414 414 GLY GLY A . n A 1 339 LYS 339 415 415 LYS LYS A . n A 1 340 SER 340 416 416 SER SER A . n A 1 341 CYS 341 417 417 CYS CYS A . n A 1 342 ILE 342 418 418 ILE ILE A . n A 1 343 ASN 343 419 419 ASN ASN A . n A 1 344 ARG 344 420 420 ARG ARG A . n A 1 345 CYS 345 421 421 CYS CYS A . n A 1 346 PHE 346 422 422 PHE PHE A . n A 1 347 TYR 347 423 423 TYR TYR A . n A 1 348 VAL 348 424 424 VAL VAL A . n A 1 349 GLU 349 425 425 GLU GLU A . n A 1 350 LEU 350 426 426 LEU LEU A . n A 1 351 ILE 351 427 427 ILE ILE A . n A 1 352 ARG 352 428 428 ARG ARG A . n A 1 353 GLY 353 429 429 GLY GLY A . n A 1 354 ARG 354 430 430 ARG ARG A . n A 1 355 LYS 355 431 431 LYS LYS A . n A 1 356 GLU 356 432 432 GLU GLU A . n A 1 357 GLU 357 433 433 GLU GLU A . n A 1 358 THR 358 434 434 THR THR A . n A 1 359 GLU 359 435 435 GLU GLU A . n A 1 360 VAL 360 436 436 VAL VAL A . n A 1 361 LEU 361 437 437 LEU LEU A . n A 1 362 TRP 362 438 438 TRP TRP A . n A 1 363 THR 363 439 439 THR THR A . n A 1 364 SER 364 440 440 SER SER A . n A 1 365 ASN 365 441 441 ASN ASN A . n A 1 366 SER 366 442 442 SER SER A . n A 1 367 ILE 367 443 443 ILE ILE A . n A 1 368 VAL 368 444 444 VAL VAL A . n A 1 369 VAL 369 445 445 VAL VAL A . n A 1 370 PHE 370 446 446 PHE PHE A . n A 1 371 CYS 371 447 447 CYS CYS A . n A 1 372 GLY 372 448 448 GLY GLY A . n A 1 373 THR 373 449 449 THR THR A . n A 1 374 SER 374 450 450 SER SER A . n A 1 375 GLY 375 451 451 GLY GLY A . n A 1 376 THR 376 452 452 THR THR A . n A 1 377 TYR 377 453 453 TYR TYR A . n A 1 378 GLY 378 454 454 GLY GLY A . n A 1 379 THR 379 455 455 THR THR A . n A 1 380 GLY 380 456 456 GLY GLY A . n A 1 381 SER 381 457 457 SER SER A . n A 1 382 TRP 382 458 458 TRP TRP A . n A 1 383 PRO 383 459 459 PRO PRO A . n A 1 384 ASP 384 460 460 ASP ASP A . n A 1 385 GLY 385 461 461 GLY GLY A . n A 1 386 ALA 386 462 462 ALA ALA A . n A 1 387 ASP 387 463 463 ASP ASP A . n A 1 388 LEU 388 464 464 LEU LEU A . n A 1 389 ASN 389 465 465 ASN ASN A . n A 1 390 LEU 390 466 466 LEU LEU A . n A 1 391 MET 391 467 467 MET MET A . n A 1 392 PRO 392 468 468 PRO PRO A . n A 1 393 ILE 393 469 469 ILE ILE A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 4 NAG 1 508 931 NAG NAG A . E 4 NAG 1 509 941 NAG NAG A . F 5 CA 1 510 501 CA CA A . G 5 CA 1 511 502 CA CA A . H 6 G39 1 512 1 G39 G39 A . I 7 HOH 1 601 1 HOH HOH A . I 7 HOH 2 602 2 HOH HOH A . I 7 HOH 3 603 3 HOH HOH A . I 7 HOH 4 604 4 HOH HOH A . I 7 HOH 5 605 5 HOH HOH A . I 7 HOH 6 606 6 HOH HOH A . I 7 HOH 7 607 7 HOH HOH A . I 7 HOH 8 608 8 HOH HOH A . I 7 HOH 9 609 9 HOH HOH A . I 7 HOH 10 610 10 HOH HOH A . I 7 HOH 11 611 11 HOH HOH A . I 7 HOH 12 612 12 HOH HOH A . I 7 HOH 13 613 13 HOH HOH A . I 7 HOH 14 614 14 HOH HOH A . I 7 HOH 15 615 15 HOH HOH A . I 7 HOH 16 616 16 HOH HOH A . I 7 HOH 17 617 17 HOH HOH A . I 7 HOH 18 618 18 HOH HOH A . I 7 HOH 19 619 19 HOH HOH A . I 7 HOH 20 620 20 HOH HOH A . I 7 HOH 21 621 21 HOH HOH A . I 7 HOH 22 622 22 HOH HOH A . I 7 HOH 23 623 23 HOH HOH A . I 7 HOH 24 624 24 HOH HOH A . I 7 HOH 25 625 25 HOH HOH A . I 7 HOH 26 626 26 HOH HOH A . I 7 HOH 27 627 27 HOH HOH A . I 7 HOH 28 628 28 HOH HOH A . I 7 HOH 29 629 29 HOH HOH A . I 7 HOH 30 630 30 HOH HOH A . I 7 HOH 31 631 31 HOH HOH A . I 7 HOH 32 632 32 HOH HOH A . I 7 HOH 33 633 33 HOH HOH A . I 7 HOH 34 634 34 HOH HOH A . I 7 HOH 35 635 35 HOH HOH A . I 7 HOH 36 636 36 HOH HOH A . I 7 HOH 37 637 37 HOH HOH A . I 7 HOH 38 638 38 HOH HOH A . I 7 HOH 39 639 39 HOH HOH A . I 7 HOH 40 640 40 HOH HOH A . I 7 HOH 41 641 41 HOH HOH A . I 7 HOH 42 642 42 HOH HOH A . I 7 HOH 43 643 43 HOH HOH A . I 7 HOH 44 644 44 HOH HOH A . I 7 HOH 45 645 45 HOH HOH A . I 7 HOH 46 646 46 HOH HOH A . I 7 HOH 47 647 47 HOH HOH A . I 7 HOH 48 648 48 HOH HOH A . I 7 HOH 49 649 49 HOH HOH A . I 7 HOH 50 650 50 HOH HOH A . I 7 HOH 51 651 51 HOH HOH A . I 7 HOH 52 652 52 HOH HOH A . I 7 HOH 53 653 53 HOH HOH A . I 7 HOH 54 654 54 HOH HOH A . I 7 HOH 55 655 55 HOH HOH A . I 7 HOH 56 656 56 HOH HOH A . I 7 HOH 57 657 57 HOH HOH A . I 7 HOH 58 658 58 HOH HOH A . I 7 HOH 59 659 59 HOH HOH A . I 7 HOH 60 660 60 HOH HOH A . I 7 HOH 61 661 61 HOH HOH A . I 7 HOH 62 662 62 HOH HOH A . I 7 HOH 63 663 63 HOH HOH A . I 7 HOH 64 664 64 HOH HOH A . I 7 HOH 65 665 65 HOH HOH A . I 7 HOH 66 666 66 HOH HOH A . I 7 HOH 67 667 67 HOH HOH A . I 7 HOH 68 668 68 HOH HOH A . I 7 HOH 69 669 69 HOH HOH A . I 7 HOH 70 670 70 HOH HOH A . I 7 HOH 71 671 71 HOH HOH A . I 7 HOH 72 672 72 HOH HOH A . I 7 HOH 73 673 73 HOH HOH A . I 7 HOH 74 674 74 HOH HOH A . I 7 HOH 75 675 75 HOH HOH A . I 7 HOH 76 676 76 HOH HOH A . I 7 HOH 77 677 77 HOH HOH A . I 7 HOH 78 678 78 HOH HOH A . I 7 HOH 79 679 79 HOH HOH A . I 7 HOH 80 680 80 HOH HOH A . I 7 HOH 81 681 81 HOH HOH A . I 7 HOH 82 682 82 HOH HOH A . I 7 HOH 83 683 83 HOH HOH A . I 7 HOH 84 684 84 HOH HOH A . I 7 HOH 85 685 85 HOH HOH A . I 7 HOH 86 686 86 HOH HOH A . I 7 HOH 87 687 87 HOH HOH A . I 7 HOH 88 688 88 HOH HOH A . I 7 HOH 89 689 689 HOH HOH A . I 7 HOH 90 690 90 HOH HOH A . I 7 HOH 91 691 91 HOH HOH A . I 7 HOH 92 692 92 HOH HOH A . I 7 HOH 93 693 93 HOH HOH A . I 7 HOH 94 694 94 HOH HOH A . I 7 HOH 95 695 95 HOH HOH A . I 7 HOH 96 696 96 HOH HOH A . I 7 HOH 97 697 97 HOH HOH A . I 7 HOH 98 698 98 HOH HOH A . I 7 HOH 99 699 99 HOH HOH A . I 7 HOH 100 700 100 HOH HOH A . I 7 HOH 101 701 101 HOH HOH A . I 7 HOH 102 702 102 HOH HOH A . I 7 HOH 103 703 103 HOH HOH A . I 7 HOH 104 704 104 HOH HOH A . I 7 HOH 105 705 105 HOH HOH A . I 7 HOH 106 706 106 HOH HOH A . I 7 HOH 107 707 107 HOH HOH A . I 7 HOH 108 708 108 HOH HOH A . I 7 HOH 109 709 109 HOH HOH A . I 7 HOH 110 710 110 HOH HOH A . I 7 HOH 111 711 711 HOH HOH A . I 7 HOH 112 712 112 HOH HOH A . I 7 HOH 113 713 113 HOH HOH A . I 7 HOH 114 714 114 HOH HOH A . I 7 HOH 115 715 115 HOH HOH A . I 7 HOH 116 716 116 HOH HOH A . I 7 HOH 117 717 117 HOH HOH A . I 7 HOH 118 718 118 HOH HOH A . I 7 HOH 119 719 119 HOH HOH A . I 7 HOH 120 720 120 HOH HOH A . I 7 HOH 121 721 121 HOH HOH A . I 7 HOH 122 722 722 HOH HOH A . I 7 HOH 123 723 123 HOH HOH A . I 7 HOH 124 724 124 HOH HOH A . I 7 HOH 125 725 125 HOH HOH A . I 7 HOH 126 726 126 HOH HOH A . I 7 HOH 127 727 127 HOH HOH A . I 7 HOH 128 728 128 HOH HOH A . I 7 HOH 129 729 129 HOH HOH A . I 7 HOH 130 730 730 HOH HOH A . I 7 HOH 131 731 131 HOH HOH A . I 7 HOH 132 732 132 HOH HOH A . I 7 HOH 133 733 133 HOH HOH A . I 7 HOH 134 734 134 HOH HOH A . I 7 HOH 135 735 135 HOH HOH A . I 7 HOH 136 736 136 HOH HOH A . I 7 HOH 137 737 137 HOH HOH A . I 7 HOH 138 738 138 HOH HOH A . I 7 HOH 139 739 139 HOH HOH A . I 7 HOH 140 740 140 HOH HOH A . I 7 HOH 141 741 141 HOH HOH A . I 7 HOH 142 742 142 HOH HOH A . I 7 HOH 143 743 143 HOH HOH A . I 7 HOH 144 744 144 HOH HOH A . I 7 HOH 145 745 145 HOH HOH A . I 7 HOH 146 746 746 HOH HOH A . I 7 HOH 147 747 147 HOH HOH A . I 7 HOH 148 748 148 HOH HOH A . I 7 HOH 149 749 149 HOH HOH A . I 7 HOH 150 750 150 HOH HOH A . I 7 HOH 151 751 151 HOH HOH A . I 7 HOH 152 752 152 HOH HOH A . I 7 HOH 153 753 153 HOH HOH A . I 7 HOH 154 754 154 HOH HOH A . I 7 HOH 155 755 155 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A ASN 124 A ASN 200 ? ASN 'GLYCOSYLATION SITE' 2 A ASN 291 A ASN 367 ? ASN 'GLYCOSYLATION SITE' 3 A ASN 70 A ASN 146 ? ASN 'GLYCOSYLATION SITE' 4 A ASN 158 A ASN 234 ? ASN 'GLYCOSYLATION SITE' # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 25490 ? 1 MORE 9 ? 1 'SSA (A^2)' 49130 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 2_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 110.1230000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 3_545 -y+1/2,x-1/2,z 0.0000000000 -1.0000000000 0.0000000000 55.0615000000 1.0000000000 0.0000000000 0.0000000000 -55.0615000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 4 'crystal symmetry operation' 4_555 y+1/2,-x+1/2,z 0.0000000000 1.0000000000 0.0000000000 55.0615000000 -1.0000000000 0.0000000000 0.0000000000 55.0615000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 O ? A ASP 217 ? A ASP 293 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? A GLY 221 ? A GLY 297 ? 1_555 82.3 ? 2 O ? A ASP 217 ? A ASP 293 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 OD2 ? A ASP 248 ? A ASP 324 ? 1_555 91.4 ? 3 O ? A GLY 221 ? A GLY 297 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 OD2 ? A ASP 248 ? A ASP 324 ? 1_555 92.9 ? 4 O ? A ASP 217 ? A ASP 293 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? A GLY 269 ? A GLY 345 ? 1_555 100.8 ? 5 O ? A GLY 221 ? A GLY 297 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? A GLY 269 ? A GLY 345 ? 1_555 96.3 ? 6 OD2 ? A ASP 248 ? A ASP 324 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? A GLY 269 ? A GLY 345 ? 1_555 165.6 ? 7 O ? A ASP 217 ? A ASP 293 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? A HIS 271 ? A HIS 347 ? 1_555 92.3 ? 8 O ? A GLY 221 ? A GLY 297 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? A HIS 271 ? A HIS 347 ? 1_555 166.1 ? 9 OD2 ? A ASP 248 ? A ASP 324 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? A HIS 271 ? A HIS 347 ? 1_555 100.1 ? 10 O ? A GLY 269 ? A GLY 345 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? A HIS 271 ? A HIS 347 ? 1_555 72.1 ? 11 O ? A ASP 217 ? A ASP 293 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? I HOH . ? A HOH 684 ? 1_555 165.3 ? 12 O ? A GLY 221 ? A GLY 297 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? I HOH . ? A HOH 684 ? 1_555 109.7 ? 13 OD2 ? A ASP 248 ? A ASP 324 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? I HOH . ? A HOH 684 ? 1_555 96.2 ? 14 O ? A GLY 269 ? A GLY 345 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? I HOH . ? A HOH 684 ? 1_555 70.3 ? 15 O ? A HIS 271 ? A HIS 347 ? 1_555 CA ? F CA . ? A CA 510 ? 1_555 O ? I HOH . ? A HOH 684 ? 1_555 74.0 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-17 2 'Structure model' 1 1 2012-12-05 3 'Structure model' 2 0 2020-07-29 4 'Structure model' 2 1 2023-09-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description _pdbx_audit_revision_details.details 1 1 'Structure model' repository 'Initial release' ? ? 2 3 'Structure model' repository Remediation 'Carbohydrate remediation' ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Atomic model' 3 3 'Structure model' 'Data collection' 4 3 'Structure model' 'Derived calculations' 5 3 'Structure model' 'Structure summary' 6 4 'Structure model' 'Data collection' 7 4 'Structure model' 'Database references' 8 4 'Structure model' 'Refinement description' 9 4 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' atom_site 2 3 'Structure model' chem_comp 3 3 'Structure model' entity 4 3 'Structure model' pdbx_branch_scheme 5 3 'Structure model' pdbx_chem_comp_identifier 6 3 'Structure model' pdbx_entity_branch 7 3 'Structure model' pdbx_entity_branch_descriptor 8 3 'Structure model' pdbx_entity_branch_link 9 3 'Structure model' pdbx_entity_branch_list 10 3 'Structure model' pdbx_entity_nonpoly 11 3 'Structure model' pdbx_nonpoly_scheme 12 3 'Structure model' pdbx_struct_assembly_gen 13 3 'Structure model' pdbx_struct_conn_angle 14 3 'Structure model' struct_asym 15 3 'Structure model' struct_conn 16 3 'Structure model' struct_site 17 3 'Structure model' struct_site_gen 18 4 'Structure model' chem_comp 19 4 'Structure model' chem_comp_atom 20 4 'Structure model' chem_comp_bond 21 4 'Structure model' database_2 22 4 'Structure model' pdbx_initial_refinement_model # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 3 'Structure model' '_atom_site.auth_asym_id' 2 3 'Structure model' '_atom_site.auth_seq_id' 3 3 'Structure model' '_atom_site.label_asym_id' 4 3 'Structure model' '_atom_site.label_entity_id' 5 3 'Structure model' '_chem_comp.name' 6 3 'Structure model' '_chem_comp.type' 7 3 'Structure model' '_entity.formula_weight' 8 3 'Structure model' '_entity.pdbx_description' 9 3 'Structure model' '_entity.pdbx_number_of_molecules' 10 3 'Structure model' '_entity.type' 11 3 'Structure model' '_pdbx_struct_assembly_gen.asym_id_list' 12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id' 13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id' 14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id' 17 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 18 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_comp_id' 19 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id' 20 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 21 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_comp_id' 22 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_seq_id' 23 3 'Structure model' '_pdbx_struct_conn_angle.value' 24 3 'Structure model' '_struct_conn.conn_type_id' 25 3 'Structure model' '_struct_conn.id' 26 3 'Structure model' '_struct_conn.pdbx_dist_value' 27 3 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 28 3 'Structure model' '_struct_conn.pdbx_role' 29 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 30 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 31 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 32 3 'Structure model' '_struct_conn.ptnr1_label_asym_id' 33 3 'Structure model' '_struct_conn.ptnr1_label_atom_id' 34 3 'Structure model' '_struct_conn.ptnr1_label_comp_id' 35 3 'Structure model' '_struct_conn.ptnr1_label_seq_id' 36 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 37 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 38 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 39 3 'Structure model' '_struct_conn.ptnr2_label_asym_id' 40 3 'Structure model' '_struct_conn.ptnr2_label_atom_id' 41 3 'Structure model' '_struct_conn.ptnr2_label_comp_id' 42 4 'Structure model' '_chem_comp.pdbx_synonyms' 43 4 'Structure model' '_database_2.pdbx_DOI' 44 4 'Structure model' '_database_2.pdbx_database_accession' # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.5.0109 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _pdbx_entry_details.entry_id 4GZP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details 'AUTHORS STATE THAT THE GISAID ACCESSION NUMBER IS EPI342198 FOR THIS SEQUENCE.' _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD1 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 309 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 OG _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 SER _pdbx_validate_close_contact.auth_seq_id_2 311 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # _pdbx_validate_rmsd_angle.id 1 _pdbx_validate_rmsd_angle.PDB_model_num 1 _pdbx_validate_rmsd_angle.auth_atom_id_1 CB _pdbx_validate_rmsd_angle.auth_asym_id_1 A _pdbx_validate_rmsd_angle.auth_comp_id_1 VAL _pdbx_validate_rmsd_angle.auth_seq_id_1 216 _pdbx_validate_rmsd_angle.PDB_ins_code_1 ? _pdbx_validate_rmsd_angle.label_alt_id_1 ? _pdbx_validate_rmsd_angle.auth_atom_id_2 CA _pdbx_validate_rmsd_angle.auth_asym_id_2 A _pdbx_validate_rmsd_angle.auth_comp_id_2 VAL _pdbx_validate_rmsd_angle.auth_seq_id_2 216 _pdbx_validate_rmsd_angle.PDB_ins_code_2 ? _pdbx_validate_rmsd_angle.label_alt_id_2 ? _pdbx_validate_rmsd_angle.auth_atom_id_3 C _pdbx_validate_rmsd_angle.auth_asym_id_3 A _pdbx_validate_rmsd_angle.auth_comp_id_3 VAL _pdbx_validate_rmsd_angle.auth_seq_id_3 216 _pdbx_validate_rmsd_angle.PDB_ins_code_3 ? _pdbx_validate_rmsd_angle.label_alt_id_3 ? _pdbx_validate_rmsd_angle.angle_value 98.80 _pdbx_validate_rmsd_angle.angle_target_value 111.40 _pdbx_validate_rmsd_angle.angle_deviation -12.60 _pdbx_validate_rmsd_angle.angle_standard_deviation 1.90 _pdbx_validate_rmsd_angle.linker_flag N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ALA A 177 ? ? -170.96 127.68 2 1 ASN A 200 ? ? -166.93 50.58 3 1 ILE A 222 ? ? 65.27 64.49 4 1 TYR A 284 ? ? -38.70 127.97 5 1 CYS A 291 ? ? -113.74 -166.92 6 1 TRP A 295 ? ? -105.90 -72.96 7 1 SER A 315 ? ? -172.90 -154.94 8 1 SER A 319 ? ? -25.98 127.50 9 1 HIS A 347 ? ? 65.08 -173.16 10 1 GLU A 381 ? ? 58.72 11.34 11 1 SER A 404 ? ? -117.90 -128.81 12 1 PRO A 468 ? ? -31.76 97.96 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY 77 ? A GLY 1 2 1 Y 1 A SER 78 ? A SER 2 3 1 Y 1 A PRO 79 ? A PRO 3 4 1 Y 1 A SER 80 ? A SER 4 5 1 Y 1 A ARG 81 ? A ARG 5 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 BMA C1 C N R 74 BMA C2 C N S 75 BMA C3 C N S 76 BMA C4 C N S 77 BMA C5 C N R 78 BMA C6 C N N 79 BMA O1 O N N 80 BMA O2 O N N 81 BMA O3 O N N 82 BMA O4 O N N 83 BMA O5 O N N 84 BMA O6 O N N 85 BMA H1 H N N 86 BMA H2 H N N 87 BMA H3 H N N 88 BMA H4 H N N 89 BMA H5 H N N 90 BMA H61 H N N 91 BMA H62 H N N 92 BMA HO1 H N N 93 BMA HO2 H N N 94 BMA HO3 H N N 95 BMA HO4 H N N 96 BMA HO6 H N N 97 CA CA CA N N 98 CYS N N N N 99 CYS CA C N R 100 CYS C C N N 101 CYS O O N N 102 CYS CB C N N 103 CYS SG S N N 104 CYS OXT O N N 105 CYS H H N N 106 CYS H2 H N N 107 CYS HA H N N 108 CYS HB2 H N N 109 CYS HB3 H N N 110 CYS HG H N N 111 CYS HXT H N N 112 G39 C1 C N N 113 G39 O1A O N N 114 G39 O1B O N N 115 G39 C2 C N N 116 G39 C3 C N N 117 G39 C4 C N S 118 G39 C5 C N R 119 G39 N5 N N N 120 G39 C10 C N N 121 G39 O10 O N N 122 G39 C11 C N N 123 G39 C6 C N R 124 G39 C7 C N N 125 G39 O7 O N N 126 G39 C8 C N N 127 G39 C9 C N N 128 G39 C81 C N N 129 G39 C82 C N N 130 G39 C91 C N N 131 G39 N4 N N N 132 G39 HO1 H N N 133 G39 H31 H N N 134 G39 H32 H N N 135 G39 H4 H N N 136 G39 H5 H N N 137 G39 HN5 H N N 138 G39 H111 H N N 139 G39 H112 H N N 140 G39 H113 H N N 141 G39 H6 H N N 142 G39 H7 H N N 143 G39 H8 H N N 144 G39 H91 H N N 145 G39 H92 H N N 146 G39 H811 H N N 147 G39 H812 H N N 148 G39 H821 H N N 149 G39 H822 H N N 150 G39 H823 H N N 151 G39 H911 H N N 152 G39 H912 H N N 153 G39 H913 H N N 154 G39 HN41 H N N 155 G39 HN42 H N N 156 GLN N N N N 157 GLN CA C N S 158 GLN C C N N 159 GLN O O N N 160 GLN CB C N N 161 GLN CG C N N 162 GLN CD C N N 163 GLN OE1 O N N 164 GLN NE2 N N N 165 GLN OXT O N N 166 GLN H H N N 167 GLN H2 H N N 168 GLN HA H N N 169 GLN HB2 H N N 170 GLN HB3 H N N 171 GLN HG2 H N N 172 GLN HG3 H N N 173 GLN HE21 H N N 174 GLN HE22 H N N 175 GLN HXT H N N 176 GLU N N N N 177 GLU CA C N S 178 GLU C C N N 179 GLU O O N N 180 GLU CB C N N 181 GLU CG C N N 182 GLU CD C N N 183 GLU OE1 O N N 184 GLU OE2 O N N 185 GLU OXT O N N 186 GLU H H N N 187 GLU H2 H N N 188 GLU HA H N N 189 GLU HB2 H N N 190 GLU HB3 H N N 191 GLU HG2 H N N 192 GLU HG3 H N N 193 GLU HE2 H N N 194 GLU HXT H N N 195 GLY N N N N 196 GLY CA C N N 197 GLY C C N N 198 GLY O O N N 199 GLY OXT O N N 200 GLY H H N N 201 GLY H2 H N N 202 GLY HA2 H N N 203 GLY HA3 H N N 204 GLY HXT H N N 205 HIS N N N N 206 HIS CA C N S 207 HIS C C N N 208 HIS O O N N 209 HIS CB C N N 210 HIS CG C Y N 211 HIS ND1 N Y N 212 HIS CD2 C Y N 213 HIS CE1 C Y N 214 HIS NE2 N Y N 215 HIS OXT O N N 216 HIS H H N N 217 HIS H2 H N N 218 HIS HA H N N 219 HIS HB2 H N N 220 HIS HB3 H N N 221 HIS HD1 H N N 222 HIS HD2 H N N 223 HIS HE1 H N N 224 HIS HE2 H N N 225 HIS HXT H N N 226 HOH O O N N 227 HOH H1 H N N 228 HOH H2 H N N 229 ILE N N N N 230 ILE CA C N S 231 ILE C C N N 232 ILE O O N N 233 ILE CB C N S 234 ILE CG1 C N N 235 ILE CG2 C N N 236 ILE CD1 C N N 237 ILE OXT O N N 238 ILE H H N N 239 ILE H2 H N N 240 ILE HA H N N 241 ILE HB H N N 242 ILE HG12 H N N 243 ILE HG13 H N N 244 ILE HG21 H N N 245 ILE HG22 H N N 246 ILE HG23 H N N 247 ILE HD11 H N N 248 ILE HD12 H N N 249 ILE HD13 H N N 250 ILE HXT H N N 251 LEU N N N N 252 LEU CA C N S 253 LEU C C N N 254 LEU O O N N 255 LEU CB C N N 256 LEU CG C N N 257 LEU CD1 C N N 258 LEU CD2 C N N 259 LEU OXT O N N 260 LEU H H N N 261 LEU H2 H N N 262 LEU HA H N N 263 LEU HB2 H N N 264 LEU HB3 H N N 265 LEU HG H N N 266 LEU HD11 H N N 267 LEU HD12 H N N 268 LEU HD13 H N N 269 LEU HD21 H N N 270 LEU HD22 H N N 271 LEU HD23 H N N 272 LEU HXT H N N 273 LYS N N N N 274 LYS CA C N S 275 LYS C C N N 276 LYS O O N N 277 LYS CB C N N 278 LYS CG C N N 279 LYS CD C N N 280 LYS CE C N N 281 LYS NZ N N N 282 LYS OXT O N N 283 LYS H H N N 284 LYS H2 H N N 285 LYS HA H N N 286 LYS HB2 H N N 287 LYS HB3 H N N 288 LYS HG2 H N N 289 LYS HG3 H N N 290 LYS HD2 H N N 291 LYS HD3 H N N 292 LYS HE2 H N N 293 LYS HE3 H N N 294 LYS HZ1 H N N 295 LYS HZ2 H N N 296 LYS HZ3 H N N 297 LYS HXT H N N 298 MAN C1 C N S 299 MAN C2 C N S 300 MAN C3 C N S 301 MAN C4 C N S 302 MAN C5 C N R 303 MAN C6 C N N 304 MAN O1 O N N 305 MAN O2 O N N 306 MAN O3 O N N 307 MAN O4 O N N 308 MAN O5 O N N 309 MAN O6 O N N 310 MAN H1 H N N 311 MAN H2 H N N 312 MAN H3 H N N 313 MAN H4 H N N 314 MAN H5 H N N 315 MAN H61 H N N 316 MAN H62 H N N 317 MAN HO1 H N N 318 MAN HO2 H N N 319 MAN HO3 H N N 320 MAN HO4 H N N 321 MAN HO6 H N N 322 MET N N N N 323 MET CA C N S 324 MET C C N N 325 MET O O N N 326 MET CB C N N 327 MET CG C N N 328 MET SD S N N 329 MET CE C N N 330 MET OXT O N N 331 MET H H N N 332 MET H2 H N N 333 MET HA H N N 334 MET HB2 H N N 335 MET HB3 H N N 336 MET HG2 H N N 337 MET HG3 H N N 338 MET HE1 H N N 339 MET HE2 H N N 340 MET HE3 H N N 341 MET HXT H N N 342 NAG C1 C N R 343 NAG C2 C N R 344 NAG C3 C N R 345 NAG C4 C N S 346 NAG C5 C N R 347 NAG C6 C N N 348 NAG C7 C N N 349 NAG C8 C N N 350 NAG N2 N N N 351 NAG O1 O N N 352 NAG O3 O N N 353 NAG O4 O N N 354 NAG O5 O N N 355 NAG O6 O N N 356 NAG O7 O N N 357 NAG H1 H N N 358 NAG H2 H N N 359 NAG H3 H N N 360 NAG H4 H N N 361 NAG H5 H N N 362 NAG H61 H N N 363 NAG H62 H N N 364 NAG H81 H N N 365 NAG H82 H N N 366 NAG H83 H N N 367 NAG HN2 H N N 368 NAG HO1 H N N 369 NAG HO3 H N N 370 NAG HO4 H N N 371 NAG HO6 H N N 372 PHE N N N N 373 PHE CA C N S 374 PHE C C N N 375 PHE O O N N 376 PHE CB C N N 377 PHE CG C Y N 378 PHE CD1 C Y N 379 PHE CD2 C Y N 380 PHE CE1 C Y N 381 PHE CE2 C Y N 382 PHE CZ C Y N 383 PHE OXT O N N 384 PHE H H N N 385 PHE H2 H N N 386 PHE HA H N N 387 PHE HB2 H N N 388 PHE HB3 H N N 389 PHE HD1 H N N 390 PHE HD2 H N N 391 PHE HE1 H N N 392 PHE HE2 H N N 393 PHE HZ H N N 394 PHE HXT H N N 395 PRO N N N N 396 PRO CA C N S 397 PRO C C N N 398 PRO O O N N 399 PRO CB C N N 400 PRO CG C N N 401 PRO CD C N N 402 PRO OXT O N N 403 PRO H H N N 404 PRO HA H N N 405 PRO HB2 H N N 406 PRO HB3 H N N 407 PRO HG2 H N N 408 PRO HG3 H N N 409 PRO HD2 H N N 410 PRO HD3 H N N 411 PRO HXT H N N 412 SER N N N N 413 SER CA C N S 414 SER C C N N 415 SER O O N N 416 SER CB C N N 417 SER OG O N N 418 SER OXT O N N 419 SER H H N N 420 SER H2 H N N 421 SER HA H N N 422 SER HB2 H N N 423 SER HB3 H N N 424 SER HG H N N 425 SER HXT H N N 426 THR N N N N 427 THR CA C N S 428 THR C C N N 429 THR O O N N 430 THR CB C N R 431 THR OG1 O N N 432 THR CG2 C N N 433 THR OXT O N N 434 THR H H N N 435 THR H2 H N N 436 THR HA H N N 437 THR HB H N N 438 THR HG1 H N N 439 THR HG21 H N N 440 THR HG22 H N N 441 THR HG23 H N N 442 THR HXT H N N 443 TRP N N N N 444 TRP CA C N S 445 TRP C C N N 446 TRP O O N N 447 TRP CB C N N 448 TRP CG C Y N 449 TRP CD1 C Y N 450 TRP CD2 C Y N 451 TRP NE1 N Y N 452 TRP CE2 C Y N 453 TRP CE3 C Y N 454 TRP CZ2 C Y N 455 TRP CZ3 C Y N 456 TRP CH2 C Y N 457 TRP OXT O N N 458 TRP H H N N 459 TRP H2 H N N 460 TRP HA H N N 461 TRP HB2 H N N 462 TRP HB3 H N N 463 TRP HD1 H N N 464 TRP HE1 H N N 465 TRP HE3 H N N 466 TRP HZ2 H N N 467 TRP HZ3 H N N 468 TRP HH2 H N N 469 TRP HXT H N N 470 TYR N N N N 471 TYR CA C N S 472 TYR C C N N 473 TYR O O N N 474 TYR CB C N N 475 TYR CG C Y N 476 TYR CD1 C Y N 477 TYR CD2 C Y N 478 TYR CE1 C Y N 479 TYR CE2 C Y N 480 TYR CZ C Y N 481 TYR OH O N N 482 TYR OXT O N N 483 TYR H H N N 484 TYR H2 H N N 485 TYR HA H N N 486 TYR HB2 H N N 487 TYR HB3 H N N 488 TYR HD1 H N N 489 TYR HD2 H N N 490 TYR HE1 H N N 491 TYR HE2 H N N 492 TYR HH H N N 493 TYR HXT H N N 494 VAL N N N N 495 VAL CA C N S 496 VAL C C N N 497 VAL O O N N 498 VAL CB C N N 499 VAL CG1 C N N 500 VAL CG2 C N N 501 VAL OXT O N N 502 VAL H H N N 503 VAL H2 H N N 504 VAL HA H N N 505 VAL HB H N N 506 VAL HG11 H N N 507 VAL HG12 H N N 508 VAL HG13 H N N 509 VAL HG21 H N N 510 VAL HG22 H N N 511 VAL HG23 H N N 512 VAL HXT H N N 513 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 BMA C1 C2 sing N N 70 BMA C1 O1 sing N N 71 BMA C1 O5 sing N N 72 BMA C1 H1 sing N N 73 BMA C2 C3 sing N N 74 BMA C2 O2 sing N N 75 BMA C2 H2 sing N N 76 BMA C3 C4 sing N N 77 BMA C3 O3 sing N N 78 BMA C3 H3 sing N N 79 BMA C4 C5 sing N N 80 BMA C4 O4 sing N N 81 BMA C4 H4 sing N N 82 BMA C5 C6 sing N N 83 BMA C5 O5 sing N N 84 BMA C5 H5 sing N N 85 BMA C6 O6 sing N N 86 BMA C6 H61 sing N N 87 BMA C6 H62 sing N N 88 BMA O1 HO1 sing N N 89 BMA O2 HO2 sing N N 90 BMA O3 HO3 sing N N 91 BMA O4 HO4 sing N N 92 BMA O6 HO6 sing N N 93 CYS N CA sing N N 94 CYS N H sing N N 95 CYS N H2 sing N N 96 CYS CA C sing N N 97 CYS CA CB sing N N 98 CYS CA HA sing N N 99 CYS C O doub N N 100 CYS C OXT sing N N 101 CYS CB SG sing N N 102 CYS CB HB2 sing N N 103 CYS CB HB3 sing N N 104 CYS SG HG sing N N 105 CYS OXT HXT sing N N 106 G39 C1 O1A doub N N 107 G39 C1 O1B sing N N 108 G39 C1 C2 sing N N 109 G39 O1B HO1 sing N N 110 G39 C2 C3 sing N N 111 G39 C2 C7 doub N N 112 G39 C3 C4 sing N N 113 G39 C3 H31 sing N N 114 G39 C3 H32 sing N N 115 G39 C4 C5 sing N N 116 G39 C4 N4 sing N N 117 G39 C4 H4 sing N N 118 G39 C5 N5 sing N N 119 G39 C5 C6 sing N N 120 G39 C5 H5 sing N N 121 G39 N5 C10 sing N N 122 G39 N5 HN5 sing N N 123 G39 C10 O10 doub N N 124 G39 C10 C11 sing N N 125 G39 C11 H111 sing N N 126 G39 C11 H112 sing N N 127 G39 C11 H113 sing N N 128 G39 C6 C7 sing N N 129 G39 C6 O7 sing N N 130 G39 C6 H6 sing N N 131 G39 C7 H7 sing N N 132 G39 O7 C8 sing N N 133 G39 C8 C9 sing N N 134 G39 C8 C81 sing N N 135 G39 C8 H8 sing N N 136 G39 C9 C91 sing N N 137 G39 C9 H91 sing N N 138 G39 C9 H92 sing N N 139 G39 C81 C82 sing N N 140 G39 C81 H811 sing N N 141 G39 C81 H812 sing N N 142 G39 C82 H821 sing N N 143 G39 C82 H822 sing N N 144 G39 C82 H823 sing N N 145 G39 C91 H911 sing N N 146 G39 C91 H912 sing N N 147 G39 C91 H913 sing N N 148 G39 N4 HN41 sing N N 149 G39 N4 HN42 sing N N 150 GLN N CA sing N N 151 GLN N H sing N N 152 GLN N H2 sing N N 153 GLN CA C sing N N 154 GLN CA CB sing N N 155 GLN CA HA sing N N 156 GLN C O doub N N 157 GLN C OXT sing N N 158 GLN CB CG sing N N 159 GLN CB HB2 sing N N 160 GLN CB HB3 sing N N 161 GLN CG CD sing N N 162 GLN CG HG2 sing N N 163 GLN CG HG3 sing N N 164 GLN CD OE1 doub N N 165 GLN CD NE2 sing N N 166 GLN NE2 HE21 sing N N 167 GLN NE2 HE22 sing N N 168 GLN OXT HXT sing N N 169 GLU N CA sing N N 170 GLU N H sing N N 171 GLU N H2 sing N N 172 GLU CA C sing N N 173 GLU CA CB sing N N 174 GLU CA HA sing N N 175 GLU C O doub N N 176 GLU C OXT sing N N 177 GLU CB CG sing N N 178 GLU CB HB2 sing N N 179 GLU CB HB3 sing N N 180 GLU CG CD sing N N 181 GLU CG HG2 sing N N 182 GLU CG HG3 sing N N 183 GLU CD OE1 doub N N 184 GLU CD OE2 sing N N 185 GLU OE2 HE2 sing N N 186 GLU OXT HXT sing N N 187 GLY N CA sing N N 188 GLY N H sing N N 189 GLY N H2 sing N N 190 GLY CA C sing N N 191 GLY CA HA2 sing N N 192 GLY CA HA3 sing N N 193 GLY C O doub N N 194 GLY C OXT sing N N 195 GLY OXT HXT sing N N 196 HIS N CA sing N N 197 HIS N H sing N N 198 HIS N H2 sing N N 199 HIS CA C sing N N 200 HIS CA CB sing N N 201 HIS CA HA sing N N 202 HIS C O doub N N 203 HIS C OXT sing N N 204 HIS CB CG sing N N 205 HIS CB HB2 sing N N 206 HIS CB HB3 sing N N 207 HIS CG ND1 sing Y N 208 HIS CG CD2 doub Y N 209 HIS ND1 CE1 doub Y N 210 HIS ND1 HD1 sing N N 211 HIS CD2 NE2 sing Y N 212 HIS CD2 HD2 sing N N 213 HIS CE1 NE2 sing Y N 214 HIS CE1 HE1 sing N N 215 HIS NE2 HE2 sing N N 216 HIS OXT HXT sing N N 217 HOH O H1 sing N N 218 HOH O H2 sing N N 219 ILE N CA sing N N 220 ILE N H sing N N 221 ILE N H2 sing N N 222 ILE CA C sing N N 223 ILE CA CB sing N N 224 ILE CA HA sing N N 225 ILE C O doub N N 226 ILE C OXT sing N N 227 ILE CB CG1 sing N N 228 ILE CB CG2 sing N N 229 ILE CB HB sing N N 230 ILE CG1 CD1 sing N N 231 ILE CG1 HG12 sing N N 232 ILE CG1 HG13 sing N N 233 ILE CG2 HG21 sing N N 234 ILE CG2 HG22 sing N N 235 ILE CG2 HG23 sing N N 236 ILE CD1 HD11 sing N N 237 ILE CD1 HD12 sing N N 238 ILE CD1 HD13 sing N N 239 ILE OXT HXT sing N N 240 LEU N CA sing N N 241 LEU N H sing N N 242 LEU N H2 sing N N 243 LEU CA C sing N N 244 LEU CA CB sing N N 245 LEU CA HA sing N N 246 LEU C O doub N N 247 LEU C OXT sing N N 248 LEU CB CG sing N N 249 LEU CB HB2 sing N N 250 LEU CB HB3 sing N N 251 LEU CG CD1 sing N N 252 LEU CG CD2 sing N N 253 LEU CG HG sing N N 254 LEU CD1 HD11 sing N N 255 LEU CD1 HD12 sing N N 256 LEU CD1 HD13 sing N N 257 LEU CD2 HD21 sing N N 258 LEU CD2 HD22 sing N N 259 LEU CD2 HD23 sing N N 260 LEU OXT HXT sing N N 261 LYS N CA sing N N 262 LYS N H sing N N 263 LYS N H2 sing N N 264 LYS CA C sing N N 265 LYS CA CB sing N N 266 LYS CA HA sing N N 267 LYS C O doub N N 268 LYS C OXT sing N N 269 LYS CB CG sing N N 270 LYS CB HB2 sing N N 271 LYS CB HB3 sing N N 272 LYS CG CD sing N N 273 LYS CG HG2 sing N N 274 LYS CG HG3 sing N N 275 LYS CD CE sing N N 276 LYS CD HD2 sing N N 277 LYS CD HD3 sing N N 278 LYS CE NZ sing N N 279 LYS CE HE2 sing N N 280 LYS CE HE3 sing N N 281 LYS NZ HZ1 sing N N 282 LYS NZ HZ2 sing N N 283 LYS NZ HZ3 sing N N 284 LYS OXT HXT sing N N 285 MAN C1 C2 sing N N 286 MAN C1 O1 sing N N 287 MAN C1 O5 sing N N 288 MAN C1 H1 sing N N 289 MAN C2 C3 sing N N 290 MAN C2 O2 sing N N 291 MAN C2 H2 sing N N 292 MAN C3 C4 sing N N 293 MAN C3 O3 sing N N 294 MAN C3 H3 sing N N 295 MAN C4 C5 sing N N 296 MAN C4 O4 sing N N 297 MAN C4 H4 sing N N 298 MAN C5 C6 sing N N 299 MAN C5 O5 sing N N 300 MAN C5 H5 sing N N 301 MAN C6 O6 sing N N 302 MAN C6 H61 sing N N 303 MAN C6 H62 sing N N 304 MAN O1 HO1 sing N N 305 MAN O2 HO2 sing N N 306 MAN O3 HO3 sing N N 307 MAN O4 HO4 sing N N 308 MAN O6 HO6 sing N N 309 MET N CA sing N N 310 MET N H sing N N 311 MET N H2 sing N N 312 MET CA C sing N N 313 MET CA CB sing N N 314 MET CA HA sing N N 315 MET C O doub N N 316 MET C OXT sing N N 317 MET CB CG sing N N 318 MET CB HB2 sing N N 319 MET CB HB3 sing N N 320 MET CG SD sing N N 321 MET CG HG2 sing N N 322 MET CG HG3 sing N N 323 MET SD CE sing N N 324 MET CE HE1 sing N N 325 MET CE HE2 sing N N 326 MET CE HE3 sing N N 327 MET OXT HXT sing N N 328 NAG C1 C2 sing N N 329 NAG C1 O1 sing N N 330 NAG C1 O5 sing N N 331 NAG C1 H1 sing N N 332 NAG C2 C3 sing N N 333 NAG C2 N2 sing N N 334 NAG C2 H2 sing N N 335 NAG C3 C4 sing N N 336 NAG C3 O3 sing N N 337 NAG C3 H3 sing N N 338 NAG C4 C5 sing N N 339 NAG C4 O4 sing N N 340 NAG C4 H4 sing N N 341 NAG C5 C6 sing N N 342 NAG C5 O5 sing N N 343 NAG C5 H5 sing N N 344 NAG C6 O6 sing N N 345 NAG C6 H61 sing N N 346 NAG C6 H62 sing N N 347 NAG C7 C8 sing N N 348 NAG C7 N2 sing N N 349 NAG C7 O7 doub N N 350 NAG C8 H81 sing N N 351 NAG C8 H82 sing N N 352 NAG C8 H83 sing N N 353 NAG N2 HN2 sing N N 354 NAG O1 HO1 sing N N 355 NAG O3 HO3 sing N N 356 NAG O4 HO4 sing N N 357 NAG O6 HO6 sing N N 358 PHE N CA sing N N 359 PHE N H sing N N 360 PHE N H2 sing N N 361 PHE CA C sing N N 362 PHE CA CB sing N N 363 PHE CA HA sing N N 364 PHE C O doub N N 365 PHE C OXT sing N N 366 PHE CB CG sing N N 367 PHE CB HB2 sing N N 368 PHE CB HB3 sing N N 369 PHE CG CD1 doub Y N 370 PHE CG CD2 sing Y N 371 PHE CD1 CE1 sing Y N 372 PHE CD1 HD1 sing N N 373 PHE CD2 CE2 doub Y N 374 PHE CD2 HD2 sing N N 375 PHE CE1 CZ doub Y N 376 PHE CE1 HE1 sing N N 377 PHE CE2 CZ sing Y N 378 PHE CE2 HE2 sing N N 379 PHE CZ HZ sing N N 380 PHE OXT HXT sing N N 381 PRO N CA sing N N 382 PRO N CD sing N N 383 PRO N H sing N N 384 PRO CA C sing N N 385 PRO CA CB sing N N 386 PRO CA HA sing N N 387 PRO C O doub N N 388 PRO C OXT sing N N 389 PRO CB CG sing N N 390 PRO CB HB2 sing N N 391 PRO CB HB3 sing N N 392 PRO CG CD sing N N 393 PRO CG HG2 sing N N 394 PRO CG HG3 sing N N 395 PRO CD HD2 sing N N 396 PRO CD HD3 sing N N 397 PRO OXT HXT sing N N 398 SER N CA sing N N 399 SER N H sing N N 400 SER N H2 sing N N 401 SER CA C sing N N 402 SER CA CB sing N N 403 SER CA HA sing N N 404 SER C O doub N N 405 SER C OXT sing N N 406 SER CB OG sing N N 407 SER CB HB2 sing N N 408 SER CB HB3 sing N N 409 SER OG HG sing N N 410 SER OXT HXT sing N N 411 THR N CA sing N N 412 THR N H sing N N 413 THR N H2 sing N N 414 THR CA C sing N N 415 THR CA CB sing N N 416 THR CA HA sing N N 417 THR C O doub N N 418 THR C OXT sing N N 419 THR CB OG1 sing N N 420 THR CB CG2 sing N N 421 THR CB HB sing N N 422 THR OG1 HG1 sing N N 423 THR CG2 HG21 sing N N 424 THR CG2 HG22 sing N N 425 THR CG2 HG23 sing N N 426 THR OXT HXT sing N N 427 TRP N CA sing N N 428 TRP N H sing N N 429 TRP N H2 sing N N 430 TRP CA C sing N N 431 TRP CA CB sing N N 432 TRP CA HA sing N N 433 TRP C O doub N N 434 TRP C OXT sing N N 435 TRP CB CG sing N N 436 TRP CB HB2 sing N N 437 TRP CB HB3 sing N N 438 TRP CG CD1 doub Y N 439 TRP CG CD2 sing Y N 440 TRP CD1 NE1 sing Y N 441 TRP CD1 HD1 sing N N 442 TRP CD2 CE2 doub Y N 443 TRP CD2 CE3 sing Y N 444 TRP NE1 CE2 sing Y N 445 TRP NE1 HE1 sing N N 446 TRP CE2 CZ2 sing Y N 447 TRP CE3 CZ3 doub Y N 448 TRP CE3 HE3 sing N N 449 TRP CZ2 CH2 doub Y N 450 TRP CZ2 HZ2 sing N N 451 TRP CZ3 CH2 sing Y N 452 TRP CZ3 HZ3 sing N N 453 TRP CH2 HH2 sing N N 454 TRP OXT HXT sing N N 455 TYR N CA sing N N 456 TYR N H sing N N 457 TYR N H2 sing N N 458 TYR CA C sing N N 459 TYR CA CB sing N N 460 TYR CA HA sing N N 461 TYR C O doub N N 462 TYR C OXT sing N N 463 TYR CB CG sing N N 464 TYR CB HB2 sing N N 465 TYR CB HB3 sing N N 466 TYR CG CD1 doub Y N 467 TYR CG CD2 sing Y N 468 TYR CD1 CE1 sing Y N 469 TYR CD1 HD1 sing N N 470 TYR CD2 CE2 doub Y N 471 TYR CD2 HD2 sing N N 472 TYR CE1 CZ doub Y N 473 TYR CE1 HE1 sing N N 474 TYR CE2 CZ sing Y N 475 TYR CE2 HE2 sing N N 476 TYR CZ OH sing N N 477 TYR OH HH sing N N 478 TYR OXT HXT sing N N 479 VAL N CA sing N N 480 VAL N H sing N N 481 VAL N H2 sing N N 482 VAL CA C sing N N 483 VAL CA CB sing N N 484 VAL CA HA sing N N 485 VAL C O doub N N 486 VAL C OXT sing N N 487 VAL CB CG1 sing N N 488 VAL CB CG2 sing N N 489 VAL CB HB sing N N 490 VAL CG1 HG11 sing N N 491 VAL CG1 HG12 sing N N 492 VAL CG1 HG13 sing N N 493 VAL CG2 HG21 sing N N 494 VAL CG2 HG22 sing N N 495 VAL CG2 HG23 sing N N 496 VAL OXT HXT sing N N 497 # loop_ _pdbx_branch_scheme.asym_id _pdbx_branch_scheme.entity_id _pdbx_branch_scheme.mon_id _pdbx_branch_scheme.num _pdbx_branch_scheme.pdb_asym_id _pdbx_branch_scheme.pdb_mon_id _pdbx_branch_scheme.pdb_seq_num _pdbx_branch_scheme.auth_asym_id _pdbx_branch_scheme.auth_mon_id _pdbx_branch_scheme.auth_seq_num _pdbx_branch_scheme.hetero B 2 NAG 1 B NAG 1 A NAG 901 n B 2 NAG 2 B NAG 2 A NAG 902 n B 2 BMA 3 B BMA 3 A MAN 903 n B 2 MAN 4 B MAN 4 A MAN 904 n B 2 MAN 5 B MAN 5 A MAN 905 n C 3 NAG 1 C NAG 1 A NAG 921 n C 3 NAG 2 C NAG 2 A NAG 922 n # loop_ _pdbx_chem_comp_identifier.comp_id _pdbx_chem_comp_identifier.type _pdbx_chem_comp_identifier.program _pdbx_chem_comp_identifier.program_version _pdbx_chem_comp_identifier.identifier BMA 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpb BMA 'COMMON NAME' GMML 1.0 b-D-mannopyranose BMA 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-Manp BMA 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man MAN 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DManpa MAN 'COMMON NAME' GMML 1.0 a-D-mannopyranose MAN 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 a-D-Manp MAN 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 Man NAG 'CONDENSED IUPAC CARBOHYDRATE SYMBOL' GMML 1.0 DGlcpNAcb NAG 'COMMON NAME' GMML 1.0 N-acetyl-b-D-glucopyranosamine NAG 'IUPAC CARBOHYDRATE SYMBOL' PDB-CARE 1.0 b-D-GlcpNAc NAG 'SNFG CARBOHYDRATE SYMBOL' GMML 1.0 GlcNAc # loop_ _pdbx_entity_branch.entity_id _pdbx_entity_branch.type 2 oligosaccharide 3 oligosaccharide # loop_ _pdbx_entity_branch_descriptor.ordinal _pdbx_entity_branch_descriptor.entity_id _pdbx_entity_branch_descriptor.descriptor _pdbx_entity_branch_descriptor.type _pdbx_entity_branch_descriptor.program _pdbx_entity_branch_descriptor.program_version 1 2 'DManpa1-3[DManpa1-6]DManpb1-4DGlcpNAcb1-4DGlcpNAcb1-' 'Glycam Condensed Sequence' GMML 1.0 2 2 'WURCS=2.0/3,5,4/[a2122h-1b_1-5_2*NCC/3=O][a1122h-1b_1-5][a1122h-1a_1-5]/1-1-2-3-3/a4-b1_b4-c1_c3-d1_c6-e1' WURCS PDB2Glycan 1.1.0 3 2 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-Manp]{[(3+1)][a-D-Manp]{}[(6+1)][a-D-Manp]{}}}}}' LINUCS PDB-CARE ? 4 3 DGlcpNAcb1-4DGlcpNAcb1- 'Glycam Condensed Sequence' GMML 1.0 5 3 'WURCS=2.0/1,2,1/[a2122h-1b_1-5_2*NCC/3=O]/1-1/a4-b1' WURCS PDB2Glycan 1.1.0 6 3 '[]{[(4+1)][b-D-GlcpNAc]{[(4+1)][b-D-GlcpNAc]{}}}' LINUCS PDB-CARE ? # loop_ _pdbx_entity_branch_link.link_id _pdbx_entity_branch_link.entity_id _pdbx_entity_branch_link.entity_branch_list_num_1 _pdbx_entity_branch_link.comp_id_1 _pdbx_entity_branch_link.atom_id_1 _pdbx_entity_branch_link.leaving_atom_id_1 _pdbx_entity_branch_link.entity_branch_list_num_2 _pdbx_entity_branch_link.comp_id_2 _pdbx_entity_branch_link.atom_id_2 _pdbx_entity_branch_link.leaving_atom_id_2 _pdbx_entity_branch_link.value_order _pdbx_entity_branch_link.details 1 2 2 NAG C1 O1 1 NAG O4 HO4 sing ? 2 2 3 BMA C1 O1 2 NAG O4 HO4 sing ? 3 2 4 MAN C1 O1 3 BMA O3 HO3 sing ? 4 2 5 MAN C1 O1 3 BMA O6 HO6 sing ? 5 3 2 NAG C1 O1 1 NAG O4 HO4 sing ? # loop_ _pdbx_entity_branch_list.entity_id _pdbx_entity_branch_list.comp_id _pdbx_entity_branch_list.num _pdbx_entity_branch_list.hetero 2 NAG 1 n 2 NAG 2 n 2 BMA 3 n 2 MAN 4 n 2 MAN 5 n 3 NAG 1 n 3 NAG 2 n # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 4 2-acetamido-2-deoxy-beta-D-glucopyranose NAG 5 'CALCIUM ION' CA 6 '(3R,4R,5S)-4-(acetylamino)-5-amino-3-(pentan-3-yloxy)cyclohex-1-ene-1-carboxylic acid' G39 7 water HOH # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 4GZO _pdbx_initial_refinement_model.details 'PDB entry 4GZO' #