HEADER TRANSFERASE 10-SEP-12 4H0U TITLE CRYSTAL STRUCTURE OF THYMIDYLATE SYNTHASE FROM CORYNEBACTERIUM TITLE 2 GLUTAMICUM IN COMPLEX WITH DUMP COMPND MOL_ID: 1; COMPND 2 MOLECULE: THYMIDYLATE SYNTHASE; COMPND 3 CHAIN: A, B, C, D; COMPND 4 SYNONYM: TS, TSASE; COMPND 5 EC: 2.1.1.45; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: CORYNEBACTERIUM GLUTAMICUM; SOURCE 3 ORGANISM_TAXID: 196627; SOURCE 4 STRAIN: ATCC 13032 / DSM 20300 / JCM 1318 / LMG 3730 / NCIMB 10025; SOURCE 5 GENE: CG0966, CGL0844, THYA; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: XL1-BLUE; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PQE30 KEYWDS NUCLEOTIDE, DUMP, TRANSFERASE EXPDTA X-RAY DIFFRACTION AUTHOR W.C.WANG,C.M.CHANG REVDAT 2 08-NOV-23 4H0U 1 REMARK REVDAT 1 11-SEP-13 4H0U 0 JRNL AUTH W.C.WANG,C.M.CHANG JRNL TITL CRYSTAL STRUCTURE OF THYMIDYLATE SYNTHASE FROM JRNL TITL 2 CORYNEBACTERIUM GLUTAMICUM IN COMPLEX WITH DUMP JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.75 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.5.0109 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.75 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 3 NUMBER OF REFLECTIONS : 27894 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.189 REMARK 3 R VALUE (WORKING SET) : 0.187 REMARK 3 FREE R VALUE : 0.241 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1516 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.75 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.82 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2021 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.44 REMARK 3 BIN R VALUE (WORKING SET) : 0.2260 REMARK 3 BIN FREE R VALUE SET COUNT : 101 REMARK 3 BIN FREE R VALUE : 0.3230 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8264 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 80 REMARK 3 SOLVENT ATOMS : 74 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 31.96 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.98000 REMARK 3 B22 (A**2) : 0.64000 REMARK 3 B33 (A**2) : 0.34000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.371 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.261 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 12.743 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.899 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8580 ; 0.017 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 11686 ; 1.344 ; 1.948 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1018 ; 8.228 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 441 ;37.777 ;24.467 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1349 ;21.363 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 46 ;23.576 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1231 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6694 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 5104 ; 0.753 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 8225 ; 1.452 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 3476 ; 2.067 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 3461 ; 3.417 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4H0U COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 20-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000074876. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : 110 REMARK 200 PH : 8.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSRRC REMARK 200 BEAMLINE : BL13B1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0000 REMARK 200 MONOCHROMATOR : SI REMARK 200 OPTICS : MIRRORS REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 27894 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.750 REMARK 200 RESOLUTION RANGE LOW (A) : 30.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 8.000 REMARK 200 R MERGE (I) : 0.11500 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.75 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.85 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 8.10 REMARK 200 R MERGE FOR SHELL (I) : 0.44600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 5.080 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 4H0R REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 46.19 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.29 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M MAGNESIUM CHLORIDE, 0.1M TRIS REMARK 280 -HCL, 21% PEG3350, PH 8.5, VAPOR DIFFUSION, HANGING DROP, REMARK 280 TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 38.02100 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 82.87350 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.90750 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 82.87350 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 38.02100 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.90750 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5140 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 21230 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5050 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 20530 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -23.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C, D REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 ASP A 23 REMARK 465 ARG A 24 REMARK 465 THR A 25 REMARK 465 GLY A 26 REMARK 465 ALA A 265 REMARK 465 VAL A 266 REMARK 465 ASP B 23 REMARK 465 ARG B 24 REMARK 465 THR B 25 REMARK 465 GLY B 262 REMARK 465 LYS B 263 REMARK 465 VAL B 264 REMARK 465 ALA B 265 REMARK 465 VAL B 266 REMARK 465 ASP C 22 REMARK 465 ASP C 23 REMARK 465 ARG C 24 REMARK 465 THR C 25 REMARK 465 GLY C 26 REMARK 465 THR C 27 REMARK 465 ARG C 261 REMARK 465 GLY C 262 REMARK 465 LYS C 263 REMARK 465 VAL C 264 REMARK 465 ALA C 265 REMARK 465 VAL C 266 REMARK 465 MET D 1 REMARK 465 ASP D 23 REMARK 465 ARG D 24 REMARK 465 THR D 25 REMARK 465 GLY D 26 REMARK 465 THR D 27 REMARK 465 ARG D 261 REMARK 465 GLY D 262 REMARK 465 LYS D 263 REMARK 465 VAL D 264 REMARK 465 ALA D 265 REMARK 465 VAL D 266 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O TYR B 184 CG2 THR B 188 2.11 REMARK 500 NH2 ARG B 38 OE1 GLU B 201 2.16 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 CYS C 209 CB CYS C 209 SG -0.100 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 97 -86.51 1.25 REMARK 500 SER A 103 52.93 -163.42 REMARK 500 TRP A 104 107.86 -58.68 REMARK 500 ARG A 110 -158.39 -92.44 REMARK 500 ALA A 158 -75.48 -102.39 REMARK 500 ASN A 214 11.81 -69.39 REMARK 500 LYS A 237 90.00 -62.53 REMARK 500 LEU A 259 131.13 -37.93 REMARK 500 TYR B 97 -69.19 -24.38 REMARK 500 SER B 103 48.99 -159.80 REMARK 500 ASP B 108 -140.86 -68.09 REMARK 500 ARG B 110 -167.02 -109.71 REMARK 500 ILE B 115 -70.77 -57.35 REMARK 500 ASN B 125 69.19 -152.11 REMARK 500 CYS B 149 -67.85 -97.25 REMARK 500 ALA B 158 -95.98 -109.59 REMARK 500 ASP B 172 88.69 -65.05 REMARK 500 ASP B 208 98.68 -66.30 REMARK 500 ASN B 214 4.27 -65.77 REMARK 500 GLN B 222 -37.85 -38.89 REMARK 500 THR C 2 127.62 -175.28 REMARK 500 PRO C 46 46.11 -65.24 REMARK 500 ASN C 79 33.64 76.14 REMARK 500 TYR C 97 -89.52 12.15 REMARK 500 SER C 103 65.18 -159.63 REMARK 500 LEU C 146 134.10 -171.68 REMARK 500 ALA C 158 -87.71 -111.49 REMARK 500 ASP C 159 71.46 -118.47 REMARK 500 ASP C 255 59.77 -114.36 REMARK 500 THR D 5 56.59 -142.89 REMARK 500 PRO D 46 62.13 -69.93 REMARK 500 LYS D 51 144.72 -173.18 REMARK 500 TYR D 97 -66.02 -24.36 REMARK 500 SER D 103 65.92 -159.62 REMARK 500 ARG D 110 -165.89 -75.76 REMARK 500 ASN D 125 66.41 -165.83 REMARK 500 ASP D 172 96.66 -65.35 REMARK 500 ASN D 214 -8.47 -50.75 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UMP A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UMP B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UMP C 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE UMP D 301 DBREF 4H0U A 1 266 UNP Q8NS38 TYSY_CORGL 1 266 DBREF 4H0U B 1 266 UNP Q8NS38 TYSY_CORGL 1 266 DBREF 4H0U C 1 266 UNP Q8NS38 TYSY_CORGL 1 266 DBREF 4H0U D 1 266 UNP Q8NS38 TYSY_CORGL 1 266 SEQRES 1 A 266 MET THR VAL PRO THR PRO TYR GLU ASP LEU LEU ARG LYS SEQRES 2 A 266 ILE ALA GLU GLU GLY SER HIS LYS ASP ASP ARG THR GLY SEQRES 3 A 266 THR GLY THR THR SER LEU PHE GLY GLN GLN ILE ARG PHE SEQRES 4 A 266 ASP LEU ASN GLU GLY PHE PRO LEU LEU THR THR LYS LYS SEQRES 5 A 266 VAL HIS PHE HIS SER VAL VAL GLY GLU LEU LEU TRP PHE SEQRES 6 A 266 LEU GLN GLY ASP SER ASN VAL LYS TRP LEU GLN ASP ASN SEQRES 7 A 266 ASN ILE ARG ILE TRP ASN GLU TRP ALA ASP GLU ASP GLY SEQRES 8 A 266 GLU LEU GLY PRO VAL TYR GLY VAL GLN TRP ARG SER TRP SEQRES 9 A 266 PRO THR PRO ASP GLY ARG HIS ILE ASP GLN ILE SER GLY SEQRES 10 A 266 ALA LEU GLU THR LEU ARG ASN ASN PRO ASP SER ARG ARG SEQRES 11 A 266 ASN ILE VAL SER ALA TRP ASN VAL SER GLU LEU GLU ASN SEQRES 12 A 266 MET ALA LEU PRO PRO CYS HIS LEU LEU PHE GLN LEU TYR SEQRES 13 A 266 VAL ALA ASP GLY LYS LEU SER CYS GLN LEU TYR GLN ARG SEQRES 14 A 266 SER ALA ASP MET PHE LEU GLY VAL PRO PHE ASN ILE ALA SEQRES 15 A 266 SER TYR ALA LEU LEU THR HIS MET PHE ALA GLN GLN ALA SEQRES 16 A 266 GLY LEU GLU VAL GLY GLU PHE ILE TRP THR GLY GLY ASP SEQRES 17 A 266 CYS HIS ILE TYR ASP ASN HIS LYS GLU GLN VAL ALA GLU SEQRES 18 A 266 GLN LEU SER ARG GLU ALA ARG PRO TYR PRO THR LEU GLU SEQRES 19 A 266 LEU ASN LYS ALA ALA SER MET PHE GLU TYR SER PHE ASP SEQRES 20 A 266 ASP ILE THR VAL SER GLY TYR ASP PRO HIS PRO LEU ILE SEQRES 21 A 266 ARG GLY LYS VAL ALA VAL SEQRES 1 B 266 MET THR VAL PRO THR PRO TYR GLU ASP LEU LEU ARG LYS SEQRES 2 B 266 ILE ALA GLU GLU GLY SER HIS LYS ASP ASP ARG THR GLY SEQRES 3 B 266 THR GLY THR THR SER LEU PHE GLY GLN GLN ILE ARG PHE SEQRES 4 B 266 ASP LEU ASN GLU GLY PHE PRO LEU LEU THR THR LYS LYS SEQRES 5 B 266 VAL HIS PHE HIS SER VAL VAL GLY GLU LEU LEU TRP PHE SEQRES 6 B 266 LEU GLN GLY ASP SER ASN VAL LYS TRP LEU GLN ASP ASN SEQRES 7 B 266 ASN ILE ARG ILE TRP ASN GLU TRP ALA ASP GLU ASP GLY SEQRES 8 B 266 GLU LEU GLY PRO VAL TYR GLY VAL GLN TRP ARG SER TRP SEQRES 9 B 266 PRO THR PRO ASP GLY ARG HIS ILE ASP GLN ILE SER GLY SEQRES 10 B 266 ALA LEU GLU THR LEU ARG ASN ASN PRO ASP SER ARG ARG SEQRES 11 B 266 ASN ILE VAL SER ALA TRP ASN VAL SER GLU LEU GLU ASN SEQRES 12 B 266 MET ALA LEU PRO PRO CYS HIS LEU LEU PHE GLN LEU TYR SEQRES 13 B 266 VAL ALA ASP GLY LYS LEU SER CYS GLN LEU TYR GLN ARG SEQRES 14 B 266 SER ALA ASP MET PHE LEU GLY VAL PRO PHE ASN ILE ALA SEQRES 15 B 266 SER TYR ALA LEU LEU THR HIS MET PHE ALA GLN GLN ALA SEQRES 16 B 266 GLY LEU GLU VAL GLY GLU PHE ILE TRP THR GLY GLY ASP SEQRES 17 B 266 CYS HIS ILE TYR ASP ASN HIS LYS GLU GLN VAL ALA GLU SEQRES 18 B 266 GLN LEU SER ARG GLU ALA ARG PRO TYR PRO THR LEU GLU SEQRES 19 B 266 LEU ASN LYS ALA ALA SER MET PHE GLU TYR SER PHE ASP SEQRES 20 B 266 ASP ILE THR VAL SER GLY TYR ASP PRO HIS PRO LEU ILE SEQRES 21 B 266 ARG GLY LYS VAL ALA VAL SEQRES 1 C 266 MET THR VAL PRO THR PRO TYR GLU ASP LEU LEU ARG LYS SEQRES 2 C 266 ILE ALA GLU GLU GLY SER HIS LYS ASP ASP ARG THR GLY SEQRES 3 C 266 THR GLY THR THR SER LEU PHE GLY GLN GLN ILE ARG PHE SEQRES 4 C 266 ASP LEU ASN GLU GLY PHE PRO LEU LEU THR THR LYS LYS SEQRES 5 C 266 VAL HIS PHE HIS SER VAL VAL GLY GLU LEU LEU TRP PHE SEQRES 6 C 266 LEU GLN GLY ASP SER ASN VAL LYS TRP LEU GLN ASP ASN SEQRES 7 C 266 ASN ILE ARG ILE TRP ASN GLU TRP ALA ASP GLU ASP GLY SEQRES 8 C 266 GLU LEU GLY PRO VAL TYR GLY VAL GLN TRP ARG SER TRP SEQRES 9 C 266 PRO THR PRO ASP GLY ARG HIS ILE ASP GLN ILE SER GLY SEQRES 10 C 266 ALA LEU GLU THR LEU ARG ASN ASN PRO ASP SER ARG ARG SEQRES 11 C 266 ASN ILE VAL SER ALA TRP ASN VAL SER GLU LEU GLU ASN SEQRES 12 C 266 MET ALA LEU PRO PRO CYS HIS LEU LEU PHE GLN LEU TYR SEQRES 13 C 266 VAL ALA ASP GLY LYS LEU SER CYS GLN LEU TYR GLN ARG SEQRES 14 C 266 SER ALA ASP MET PHE LEU GLY VAL PRO PHE ASN ILE ALA SEQRES 15 C 266 SER TYR ALA LEU LEU THR HIS MET PHE ALA GLN GLN ALA SEQRES 16 C 266 GLY LEU GLU VAL GLY GLU PHE ILE TRP THR GLY GLY ASP SEQRES 17 C 266 CYS HIS ILE TYR ASP ASN HIS LYS GLU GLN VAL ALA GLU SEQRES 18 C 266 GLN LEU SER ARG GLU ALA ARG PRO TYR PRO THR LEU GLU SEQRES 19 C 266 LEU ASN LYS ALA ALA SER MET PHE GLU TYR SER PHE ASP SEQRES 20 C 266 ASP ILE THR VAL SER GLY TYR ASP PRO HIS PRO LEU ILE SEQRES 21 C 266 ARG GLY LYS VAL ALA VAL SEQRES 1 D 266 MET THR VAL PRO THR PRO TYR GLU ASP LEU LEU ARG LYS SEQRES 2 D 266 ILE ALA GLU GLU GLY SER HIS LYS ASP ASP ARG THR GLY SEQRES 3 D 266 THR GLY THR THR SER LEU PHE GLY GLN GLN ILE ARG PHE SEQRES 4 D 266 ASP LEU ASN GLU GLY PHE PRO LEU LEU THR THR LYS LYS SEQRES 5 D 266 VAL HIS PHE HIS SER VAL VAL GLY GLU LEU LEU TRP PHE SEQRES 6 D 266 LEU GLN GLY ASP SER ASN VAL LYS TRP LEU GLN ASP ASN SEQRES 7 D 266 ASN ILE ARG ILE TRP ASN GLU TRP ALA ASP GLU ASP GLY SEQRES 8 D 266 GLU LEU GLY PRO VAL TYR GLY VAL GLN TRP ARG SER TRP SEQRES 9 D 266 PRO THR PRO ASP GLY ARG HIS ILE ASP GLN ILE SER GLY SEQRES 10 D 266 ALA LEU GLU THR LEU ARG ASN ASN PRO ASP SER ARG ARG SEQRES 11 D 266 ASN ILE VAL SER ALA TRP ASN VAL SER GLU LEU GLU ASN SEQRES 12 D 266 MET ALA LEU PRO PRO CYS HIS LEU LEU PHE GLN LEU TYR SEQRES 13 D 266 VAL ALA ASP GLY LYS LEU SER CYS GLN LEU TYR GLN ARG SEQRES 14 D 266 SER ALA ASP MET PHE LEU GLY VAL PRO PHE ASN ILE ALA SEQRES 15 D 266 SER TYR ALA LEU LEU THR HIS MET PHE ALA GLN GLN ALA SEQRES 16 D 266 GLY LEU GLU VAL GLY GLU PHE ILE TRP THR GLY GLY ASP SEQRES 17 D 266 CYS HIS ILE TYR ASP ASN HIS LYS GLU GLN VAL ALA GLU SEQRES 18 D 266 GLN LEU SER ARG GLU ALA ARG PRO TYR PRO THR LEU GLU SEQRES 19 D 266 LEU ASN LYS ALA ALA SER MET PHE GLU TYR SER PHE ASP SEQRES 20 D 266 ASP ILE THR VAL SER GLY TYR ASP PRO HIS PRO LEU ILE SEQRES 21 D 266 ARG GLY LYS VAL ALA VAL HET UMP A 301 20 HET UMP B 301 20 HET UMP C 301 20 HET UMP D 301 20 HETNAM UMP 2'-DEOXYURIDINE 5'-MONOPHOSPHATE HETSYN UMP DUMP FORMUL 5 UMP 4(C9 H13 N2 O8 P) FORMUL 9 HOH *74(H2 O) HELIX 1 1 THR A 5 GLY A 18 1 14 HELIX 2 2 ASN A 42 GLY A 44 5 3 HELIX 3 3 PHE A 55 GLY A 68 1 14 HELIX 4 4 VAL A 72 ASP A 77 1 6 HELIX 5 5 TRP A 83 ALA A 87 5 5 HELIX 6 6 VAL A 96 SER A 103 1 8 HELIX 7 7 ASP A 113 ASN A 125 1 13 HELIX 8 8 ASN A 137 MET A 144 5 8 HELIX 9 9 GLY A 176 GLY A 196 1 21 HELIX 10 10 HIS A 215 SER A 224 1 10 HELIX 11 11 SER A 245 ASP A 247 5 3 HELIX 12 12 THR B 5 GLY B 18 1 14 HELIX 13 13 ASN B 42 GLY B 44 5 3 HELIX 14 14 HIS B 54 GLY B 68 1 15 HELIX 15 15 VAL B 72 ASP B 77 1 6 HELIX 16 16 TRP B 83 ALA B 87 5 5 HELIX 17 17 VAL B 96 SER B 103 1 8 HELIX 18 18 ASP B 113 ASN B 125 1 13 HELIX 19 19 ASN B 137 MET B 144 5 8 HELIX 20 20 GLY B 176 GLN B 194 1 19 HELIX 21 21 HIS B 215 LEU B 223 1 9 HELIX 22 22 SER B 245 ASP B 247 5 3 HELIX 23 23 THR C 5 GLY C 18 1 14 HELIX 24 24 ASN C 42 GLY C 44 5 3 HELIX 25 25 HIS C 54 GLN C 67 1 14 HELIX 26 26 VAL C 72 ASN C 78 1 7 HELIX 27 27 VAL C 96 SER C 103 1 8 HELIX 28 28 ASP C 113 ASN C 125 1 13 HELIX 29 29 ASN C 137 MET C 144 5 8 HELIX 30 30 GLY C 176 ALA C 195 1 20 HELIX 31 31 HIS C 215 SER C 224 1 10 HELIX 32 32 SER C 245 ASP C 247 5 3 HELIX 33 33 THR D 5 GLY D 18 1 14 HELIX 34 34 ASN D 42 GLY D 44 5 3 HELIX 35 35 PHE D 55 GLN D 67 1 13 HELIX 36 36 VAL D 72 ASN D 78 1 7 HELIX 37 37 TRP D 83 ALA D 87 5 5 HELIX 38 38 VAL D 96 SER D 103 1 8 HELIX 39 39 ASP D 113 ASN D 125 1 13 HELIX 40 40 ASN D 137 MET D 144 5 8 HELIX 41 41 GLY D 176 ALA D 195 1 20 HELIX 42 42 HIS D 215 SER D 224 1 10 HELIX 43 43 SER D 240 TYR D 244 5 5 HELIX 44 44 SER D 245 ASP D 247 5 3 SHEET 1 A 6 SER A 19 HIS A 20 0 SHEET 2 A 6 THR A 29 ASP A 40 -1 O SER A 31 N SER A 19 SHEET 3 A 6 GLU A 198 TYR A 212 -1 O GLY A 206 N GLN A 35 SHEET 4 A 6 LYS A 161 ASP A 172 1 N LEU A 162 O GLY A 200 SHEET 5 A 6 HIS A 150 VAL A 157 -1 N TYR A 156 O SER A 163 SHEET 6 A 6 ILE A 132 SER A 134 -1 N VAL A 133 O PHE A 153 SHEET 1 B 2 TRP A 104 PRO A 105 0 SHEET 2 B 2 HIS A 111 ILE A 112 -1 O ILE A 112 N TRP A 104 SHEET 1 C 2 THR A 232 LEU A 235 0 SHEET 2 C 2 ILE A 249 SER A 252 -1 O SER A 252 N THR A 232 SHEET 1 D 4 SER B 19 LYS B 21 0 SHEET 2 D 4 THR B 29 PHE B 33 -1 O SER B 31 N SER B 19 SHEET 3 D 4 GLU B 198 TYR B 212 -1 O CYS B 209 N LEU B 32 SHEET 4 D 4 GLN B 36 ASP B 40 -1 N ILE B 37 O TRP B 204 SHEET 1 E 6 SER B 19 LYS B 21 0 SHEET 2 E 6 THR B 29 PHE B 33 -1 O SER B 31 N SER B 19 SHEET 3 E 6 GLU B 198 TYR B 212 -1 O CYS B 209 N LEU B 32 SHEET 4 E 6 LYS B 161 ASP B 172 1 N LEU B 162 O GLY B 200 SHEET 5 E 6 HIS B 150 VAL B 157 -1 N LEU B 152 O TYR B 167 SHEET 6 E 6 ILE B 132 SER B 134 -1 N VAL B 133 O PHE B 153 SHEET 1 F 2 TRP B 104 PRO B 105 0 SHEET 2 F 2 HIS B 111 ILE B 112 -1 O ILE B 112 N TRP B 104 SHEET 1 G 2 THR B 232 LEU B 235 0 SHEET 2 G 2 ILE B 249 SER B 252 -1 O THR B 250 N GLU B 234 SHEET 1 H 3 THR C 29 GLN C 35 0 SHEET 2 H 3 GLU C 198 TYR C 212 -1 O GLY C 206 N GLN C 35 SHEET 3 H 3 ARG C 38 ASP C 40 -1 N PHE C 39 O PHE C 202 SHEET 1 I 5 THR C 29 GLN C 35 0 SHEET 2 I 5 GLU C 198 TYR C 212 -1 O GLY C 206 N GLN C 35 SHEET 3 I 5 LYS C 161 ASP C 172 1 N LEU C 162 O GLU C 198 SHEET 4 I 5 HIS C 150 VAL C 157 -1 N TYR C 156 O SER C 163 SHEET 5 I 5 ILE C 132 SER C 134 -1 N VAL C 133 O PHE C 153 SHEET 1 J 2 TRP C 104 PRO C 105 0 SHEET 2 J 2 HIS C 111 ILE C 112 -1 O ILE C 112 N TRP C 104 SHEET 1 K 2 THR C 232 LEU C 235 0 SHEET 2 K 2 ILE C 249 SER C 252 -1 O THR C 250 N GLU C 234 SHEET 1 L 6 SER D 19 LYS D 21 0 SHEET 2 L 6 THR D 29 ASP D 40 -1 O SER D 31 N SER D 19 SHEET 3 L 6 GLU D 198 TYR D 212 -1 O TRP D 204 N ILE D 37 SHEET 4 L 6 LYS D 161 ASP D 172 1 N LEU D 162 O GLY D 200 SHEET 5 L 6 HIS D 150 ALA D 158 -1 N LEU D 152 O TYR D 167 SHEET 6 L 6 ILE D 132 SER D 134 -1 N VAL D 133 O PHE D 153 SHEET 1 M 2 TRP D 104 PRO D 105 0 SHEET 2 M 2 HIS D 111 ILE D 112 -1 O ILE D 112 N TRP D 104 SHEET 1 N 2 THR D 232 LEU D 235 0 SHEET 2 N 2 ILE D 249 SER D 252 -1 O THR D 250 N GLU D 234 CISPEP 1 MET B 1 THR B 2 0 -13.54 SITE 1 AC1 12 CYS A 149 HIS A 150 GLN A 168 ARG A 169 SITE 2 AC1 12 SER A 170 ASP A 172 GLY A 176 ASN A 180 SITE 3 AC1 12 HIS A 210 TYR A 212 ARG B 129 ARG B 130 SITE 1 AC2 13 ARG A 129 ARG A 130 CYS B 149 HIS B 150 SITE 2 AC2 13 GLN B 168 ARG B 169 SER B 170 ASP B 172 SITE 3 AC2 13 GLY B 176 ASN B 180 HIS B 210 TYR B 212 SITE 4 AC2 13 HOH B 407 SITE 1 AC3 11 CYS C 149 HIS C 150 GLN C 168 ARG C 169 SITE 2 AC3 11 SER C 170 ASP C 172 ASN C 180 HIS C 210 SITE 3 AC3 11 TYR C 212 ARG D 129 ARG D 130 SITE 1 AC4 12 ARG C 129 ARG C 130 CYS D 149 HIS D 150 SITE 2 AC4 12 GLN D 168 ARG D 169 SER D 170 ASP D 172 SITE 3 AC4 12 GLY D 176 ASN D 180 HIS D 210 TYR D 212 CRYST1 76.042 87.815 165.747 90.00 90.00 90.00 P 21 21 21 16 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.013151 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011388 0.000000 0.00000 SCALE3 0.000000 0.000000 0.006033 0.00000