HEADER NEUROPEPTIDE 10-SEP-12 4H11 TITLE INTERACTION PARTNERS OF PSD-93 STUDIED BY X-RAY CRYSTALLOGRAPHY AND TITLE 2 FLUORESCENT POLARIZATION SPECTROSCOPY COMPND MOL_ID: 1; COMPND 2 MOLECULE: DISKS LARGE HOMOLOG 2; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: PDZ1: UNP RESIDUES 93-188; COMPND 5 SYNONYM: CHANNEL-ASSOCIATED PROTEIN OF SYNAPSE-110, CHAPSYN-110, COMPND 6 POSTSYNAPTIC DENSITY PROTEIN PSD-93; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: RATTUS NORVEGICUS; SOURCE 3 ORGANISM_COMMON: RAT; SOURCE 4 ORGANISM_TAXID: 10116; SOURCE 5 GENE: DLG2, DLGH2; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21 (DE3)PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PGEX-6P-1 KEYWDS ALL BETA PDZ, PROTEIN INTERACTION, PROTEIN BINDING, NEUROPEPTIDE EXPDTA X-RAY DIFFRACTION AUTHOR M.FIORENTINI,J.S.KASTRUP,M.GAJHEDE REVDAT 3 28-FEB-24 4H11 1 REMARK SEQADV REVDAT 2 07-MAR-18 4H11 1 REMARK REVDAT 1 03-APR-13 4H11 0 JRNL AUTH M.FIORENTINI,A.BACH,K.STROMGAARD,J.S.KASTRUP,M.GAJHEDE JRNL TITL INTERACTION PARTNERS OF PSD-93 STUDIED BY X-RAY JRNL TITL 2 CRYSTALLOGRAPHY AND FLUORESCENCE POLARIZATION SPECTROSCOPY. JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 587 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 23519667 JRNL DOI 10.1107/S0907444912051839 REMARK 2 REMARK 2 RESOLUTION. 1.67 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.67 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.0 REMARK 3 NUMBER OF REFLECTIONS : 18859 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.174 REMARK 3 R VALUE (WORKING SET) : 0.172 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.160 REMARK 3 FREE R VALUE TEST SET COUNT : 974 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 28.0055 - 3.1933 0.94 2605 127 0.1676 0.1886 REMARK 3 2 3.1933 - 2.5351 1.00 2568 160 0.1635 0.2126 REMARK 3 3 2.5351 - 2.2148 1.00 2592 138 0.1698 0.2082 REMARK 3 4 2.2148 - 2.0124 1.00 2573 116 0.1586 0.2235 REMARK 3 5 2.0124 - 1.8682 1.00 2527 148 0.1835 0.2345 REMARK 3 6 1.8682 - 1.7580 1.00 2502 144 0.1962 0.2288 REMARK 3 7 1.7580 - 1.6700 1.00 2518 141 0.2082 0.2770 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.00 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.150 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.800 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 1604 REMARK 3 ANGLE : 1.253 2174 REMARK 3 CHIRALITY : 0.079 247 REMARK 3 PLANARITY : 0.006 293 REMARK 3 DIHEDRAL : 13.130 612 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 14 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -1.7138 18.6946 34.8609 REMARK 3 T TENSOR REMARK 3 T11: 0.2056 T22: 0.0898 REMARK 3 T33: 0.1431 T12: 0.0776 REMARK 3 T13: 0.0243 T23: 0.0504 REMARK 3 L TENSOR REMARK 3 L11: 0.4828 L22: 0.2657 REMARK 3 L33: 0.3554 L12: 0.1562 REMARK 3 L13: 0.4081 L23: 0.0545 REMARK 3 S TENSOR REMARK 3 S11: 0.0263 S12: -0.0490 S13: 0.1889 REMARK 3 S21: -0.0245 S22: -0.0759 S23: 0.0943 REMARK 3 S31: -0.2389 S32: -0.2630 S33: -0.1054 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 103 THROUGH 132 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.7397 5.0392 37.1947 REMARK 3 T TENSOR REMARK 3 T11: 0.1236 T22: 0.0986 REMARK 3 T33: 0.1303 T12: -0.0073 REMARK 3 T13: 0.0455 T23: -0.0032 REMARK 3 L TENSOR REMARK 3 L11: 0.2484 L22: 0.0509 REMARK 3 L33: 0.1346 L12: -0.0751 REMARK 3 L13: 0.1924 L23: -0.0330 REMARK 3 S TENSOR REMARK 3 S11: -0.1144 S12: -0.0132 S13: -0.2337 REMARK 3 S21: -0.0605 S22: -0.0221 S23: -0.0427 REMARK 3 S31: 0.1101 S32: 0.0638 S33: -0.0302 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 133 THROUGH 148 ) REMARK 3 ORIGIN FOR THE GROUP (A): -8.6155 8.1240 38.8832 REMARK 3 T TENSOR REMARK 3 T11: 0.1175 T22: 0.1748 REMARK 3 T33: 0.1573 T12: -0.0157 REMARK 3 T13: 0.0324 T23: -0.0231 REMARK 3 L TENSOR REMARK 3 L11: 0.0377 L22: 0.0731 REMARK 3 L33: 0.1723 L12: 0.0376 REMARK 3 L13: -0.0437 L23: 0.0591 REMARK 3 S TENSOR REMARK 3 S11: 0.0751 S12: 0.1639 S13: 0.0064 REMARK 3 S21: -0.0584 S22: -0.0186 S23: 0.0712 REMARK 3 S31: -0.0804 S32: -0.3424 S33: 0.0037 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 149 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 7.7395 14.5813 41.9795 REMARK 3 T TENSOR REMARK 3 T11: 0.1270 T22: 0.0726 REMARK 3 T33: 0.1007 T12: -0.0162 REMARK 3 T13: -0.0009 T23: -0.0068 REMARK 3 L TENSOR REMARK 3 L11: 0.0469 L22: 0.0576 REMARK 3 L33: 0.0124 L12: 0.0199 REMARK 3 L13: 0.0232 L23: -0.0099 REMARK 3 S TENSOR REMARK 3 S11: -0.0323 S12: 0.0694 S13: 0.1248 REMARK 3 S21: -0.0889 S22: -0.0394 S23: -0.1163 REMARK 3 S31: -0.2388 S32: 0.0818 S33: -0.0418 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.0755 5.4698 45.1380 REMARK 3 T TENSOR REMARK 3 T11: 0.1109 T22: 0.1373 REMARK 3 T33: 0.1247 T12: 0.0463 REMARK 3 T13: 0.0001 T23: 0.0275 REMARK 3 L TENSOR REMARK 3 L11: 0.0020 L22: 0.0036 REMARK 3 L33: 0.0074 L12: 0.0013 REMARK 3 L13: -0.0032 L23: 0.0056 REMARK 3 S TENSOR REMARK 3 S11: 0.0690 S12: -0.2173 S13: -0.0226 REMARK 3 S21: -0.0075 S22: 0.0137 S23: -0.0477 REMARK 3 S31: 0.0746 S32: 0.0153 S33: 0.0028 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 172 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): 0.2319 13.8688 43.8513 REMARK 3 T TENSOR REMARK 3 T11: 0.1385 T22: 0.1254 REMARK 3 T33: 0.0772 T12: 0.0019 REMARK 3 T13: 0.0176 T23: 0.0002 REMARK 3 L TENSOR REMARK 3 L11: 0.3536 L22: 0.0920 REMARK 3 L33: 0.1293 L12: 0.1680 REMARK 3 L13: 0.1209 L23: 0.0911 REMARK 3 S TENSOR REMARK 3 S11: -0.0847 S12: -0.2299 S13: 0.1890 REMARK 3 S21: -0.1825 S22: -0.0695 S23: 0.0161 REMARK 3 S31: 0.0756 S32: -0.0811 S33: -0.0622 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 185 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): -4.2692 20.4351 17.8923 REMARK 3 T TENSOR REMARK 3 T11: 0.2748 T22: 0.3083 REMARK 3 T33: 0.3146 T12: -0.0727 REMARK 3 T13: 0.0215 T23: 0.1339 REMARK 3 L TENSOR REMARK 3 L11: 0.1872 L22: 0.0683 REMARK 3 L33: 0.0269 L12: 0.1133 REMARK 3 L13: 0.0741 L23: 0.0446 REMARK 3 S TENSOR REMARK 3 S11: 0.2251 S12: -0.1909 S13: -0.2754 REMARK 3 S21: 0.0510 S22: 0.0786 S23: -0.2662 REMARK 3 S31: 0.0340 S32: 0.0734 S33: 0.1216 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 92 THROUGH 102 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.1048 -4.7823 35.3927 REMARK 3 T TENSOR REMARK 3 T11: 0.2803 T22: 0.1060 REMARK 3 T33: 0.1822 T12: 0.0333 REMARK 3 T13: 0.0701 T23: 0.0307 REMARK 3 L TENSOR REMARK 3 L11: 1.2783 L22: 0.0734 REMARK 3 L33: 0.4010 L12: 0.2209 REMARK 3 L13: 0.6546 L23: 0.0672 REMARK 3 S TENSOR REMARK 3 S11: -0.0427 S12: -0.1557 S13: 0.2105 REMARK 3 S21: -0.4472 S22: -0.1432 S23: -0.1493 REMARK 3 S31: -0.0911 S32: -0.0762 S33: -0.0981 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 103 THROUGH 114 ) REMARK 3 ORIGIN FOR THE GROUP (A): -16.9352 -19.2435 45.7718 REMARK 3 T TENSOR REMARK 3 T11: 0.1736 T22: 0.1484 REMARK 3 T33: 0.1743 T12: 0.0281 REMARK 3 T13: 0.0369 T23: -0.0001 REMARK 3 L TENSOR REMARK 3 L11: 0.0719 L22: 0.0033 REMARK 3 L33: 0.2035 L12: 0.0290 REMARK 3 L13: 0.0518 L23: 0.0299 REMARK 3 S TENSOR REMARK 3 S11: 0.0141 S12: -0.3988 S13: 0.0633 REMARK 3 S21: 0.0789 S22: -0.0425 S23: 0.0378 REMARK 3 S31: 0.0837 S32: -0.0271 S33: 0.0043 REMARK 3 TLS GROUP : 10 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 115 THROUGH 126 ) REMARK 3 ORIGIN FOR THE GROUP (A): -2.2461 -15.8953 31.1911 REMARK 3 T TENSOR REMARK 3 T11: 0.2040 T22: 0.1542 REMARK 3 T33: 0.1052 T12: 0.0036 REMARK 3 T13: 0.0417 T23: 0.0009 REMARK 3 L TENSOR REMARK 3 L11: 0.6137 L22: -0.0007 REMARK 3 L33: 0.0782 L12: -0.0185 REMARK 3 L13: 0.2069 L23: -0.0049 REMARK 3 S TENSOR REMARK 3 S11: -0.2322 S12: 0.2076 S13: 0.1795 REMARK 3 S21: -0.1309 S22: 0.2039 S23: -0.1375 REMARK 3 S31: 0.2381 S32: 0.1734 S33: -0.0305 REMARK 3 TLS GROUP : 11 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 127 THROUGH 153 ) REMARK 3 ORIGIN FOR THE GROUP (A): -19.2395 -14.8581 37.8534 REMARK 3 T TENSOR REMARK 3 T11: 0.0680 T22: 0.0709 REMARK 3 T33: 0.0837 T12: 0.0120 REMARK 3 T13: 0.0096 T23: -0.0095 REMARK 3 L TENSOR REMARK 3 L11: 0.1449 L22: 0.1217 REMARK 3 L33: 0.2227 L12: -0.1577 REMARK 3 L13: 0.0662 L23: -0.0980 REMARK 3 S TENSOR REMARK 3 S11: -0.0939 S12: -0.1225 S13: 0.0462 REMARK 3 S21: -0.1490 S22: 0.0713 S23: 0.0179 REMARK 3 S31: -0.0255 S32: -0.2450 S33: 0.0395 REMARK 3 TLS GROUP : 12 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 154 THROUGH 171 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.8769 -12.5455 44.0306 REMARK 3 T TENSOR REMARK 3 T11: 0.1246 T22: 0.1567 REMARK 3 T33: 0.1772 T12: 0.0309 REMARK 3 T13: -0.0026 T23: -0.0250 REMARK 3 L TENSOR REMARK 3 L11: 0.0449 L22: 0.0385 REMARK 3 L33: 0.0215 L12: 0.0378 REMARK 3 L13: -0.0129 L23: 0.0168 REMARK 3 S TENSOR REMARK 3 S11: -0.0498 S12: -0.3514 S13: 0.1443 REMARK 3 S21: -0.0346 S22: -0.0033 S23: -0.0288 REMARK 3 S31: 0.0431 S32: 0.1776 S33: -0.0000 REMARK 3 TLS GROUP : 13 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 172 THROUGH 184 ) REMARK 3 ORIGIN FOR THE GROUP (A): -15.8041 -9.2453 44.4513 REMARK 3 T TENSOR REMARK 3 T11: 0.1318 T22: 0.2298 REMARK 3 T33: 0.1491 T12: 0.0012 REMARK 3 T13: 0.0322 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 0.0232 L22: 0.3863 REMARK 3 L33: 0.0308 L12: 0.0914 REMARK 3 L13: 0.0240 L23: 0.1071 REMARK 3 S TENSOR REMARK 3 S11: 0.1250 S12: -0.3271 S13: 0.2853 REMARK 3 S21: -0.1653 S22: 0.0033 S23: 0.0828 REMARK 3 S31: 0.0046 S32: -0.0837 S33: 0.0047 REMARK 3 TLS GROUP : 14 REMARK 3 SELECTION: CHAIN 'B' AND (RESID 185 THROUGH 192 ) REMARK 3 ORIGIN FOR THE GROUP (A): -21.1233 -2.8999 18.1454 REMARK 3 T TENSOR REMARK 3 T11: 0.3234 T22: 0.2443 REMARK 3 T33: 0.1892 T12: -0.1106 REMARK 3 T13: 0.0081 T23: 0.0071 REMARK 3 L TENSOR REMARK 3 L11: 0.0060 L22: 0.0143 REMARK 3 L33: 0.0140 L12: -0.0117 REMARK 3 L13: 0.0018 L23: -0.0070 REMARK 3 S TENSOR REMARK 3 S11: -0.1228 S12: -0.0563 S13: -0.0644 REMARK 3 S21: 0.0418 S22: -0.0114 S23: -0.1032 REMARK 3 S31: 0.0731 S32: 0.0102 S33: -0.0002 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4H11 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 01-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000074883. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : MAX II REMARK 200 BEAMLINE : I911-3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : FOCUSED SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MAR CCD 165 MM REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 19048 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.670 REMARK 200 RESOLUTION RANGE LOW (A) : 28.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.67 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.73 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 30.70 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.77 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: CRYSTALLIZATION OF PSD-93 PDZ1EXT WAS REMARK 280 PERFORMED USING THE HANGING-DROP VAPOR DIFFUSION TECHNIQUE BY REMARK 280 MIXING 1 MICROLITER OF A 2 MG/ML PROTEIN SOLUTION (PBS BUFFER) REMARK 280 AND 1 L RESERVOIR SOLUTION (0.2 M LITHIUM SULFATE, 20% PEG 1000, REMARK 280 0.1 M CITRIC ACID/SODIUM HYDROGEN PHOSPHATE PH 4.2. THE REMARK 280 RESERVOIR VOLUME WAS 500 MICROLITER, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 295K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 16.60000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 52.12000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 22.77500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 52.12000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 16.60000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 22.77500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 1470 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11520 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 -22.77500 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 52.12000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LEU A 193 REMARK 465 LEU B 193 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 251 O HOH A 254 1.93 REMARK 500 O HOH A 210 O HOH A 263 2.03 REMARK 500 O ACT B 202 O HOH B 334 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 147 -4.06 83.84 REMARK 500 ASN A 154 -119.20 49.74 REMARK 500 ASN B 147 -3.43 79.69 REMARK 500 ASN B 154 -120.93 50.94 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 201 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT B 202 DBREF 4H11 A 93 188 UNP Q63622 DLG2_RAT 93 188 DBREF 4H11 B 93 188 UNP Q63622 DLG2_RAT 93 188 SEQADV 4H11 SER A 91 UNP Q63622 EXPRESSION TAG SEQADV 4H11 PRO A 92 UNP Q63622 EXPRESSION TAG SEQADV 4H11 PHE A 94 UNP Q63622 TYR 94 VARIANT SEQADV 4H11 GLY A 189 UNP Q63622 EXPRESSION TAG SEQADV 4H11 THR A 190 UNP Q63622 EXPRESSION TAG SEQADV 4H11 SER A 191 UNP Q63622 EXPRESSION TAG SEQADV 4H11 ILE A 192 UNP Q63622 EXPRESSION TAG SEQADV 4H11 LEU A 193 UNP Q63622 EXPRESSION TAG SEQADV 4H11 SER B 91 UNP Q63622 EXPRESSION TAG SEQADV 4H11 PRO B 92 UNP Q63622 EXPRESSION TAG SEQADV 4H11 PHE B 94 UNP Q63622 TYR 94 VARIANT SEQADV 4H11 GLY B 189 UNP Q63622 EXPRESSION TAG SEQADV 4H11 THR B 190 UNP Q63622 EXPRESSION TAG SEQADV 4H11 SER B 191 UNP Q63622 EXPRESSION TAG SEQADV 4H11 ILE B 192 UNP Q63622 EXPRESSION TAG SEQADV 4H11 LEU B 193 UNP Q63622 EXPRESSION TAG SEQRES 1 A 103 SER PRO GLU PHE GLU PHE GLU GLU ILE THR LEU GLU ARG SEQRES 2 A 103 GLY ASN SER GLY LEU GLY PHE SER ILE ALA GLY GLY THR SEQRES 3 A 103 ASP ASN PRO HIS ILE GLY ASP ASP PRO GLY ILE PHE ILE SEQRES 4 A 103 THR LYS ILE ILE PRO GLY GLY ALA ALA ALA GLU ASP GLY SEQRES 5 A 103 ARG LEU ARG VAL ASN ASP CYS ILE LEU ARG VAL ASN GLU SEQRES 6 A 103 VAL ASP VAL SER GLU VAL SER HIS SER LYS ALA VAL GLU SEQRES 7 A 103 ALA LEU LYS GLU ALA GLY SER ILE VAL ARG LEU TYR VAL SEQRES 8 A 103 ARG ARG ARG ARG PRO ILE LEU GLY THR SER ILE LEU SEQRES 1 B 103 SER PRO GLU PHE GLU PHE GLU GLU ILE THR LEU GLU ARG SEQRES 2 B 103 GLY ASN SER GLY LEU GLY PHE SER ILE ALA GLY GLY THR SEQRES 3 B 103 ASP ASN PRO HIS ILE GLY ASP ASP PRO GLY ILE PHE ILE SEQRES 4 B 103 THR LYS ILE ILE PRO GLY GLY ALA ALA ALA GLU ASP GLY SEQRES 5 B 103 ARG LEU ARG VAL ASN ASP CYS ILE LEU ARG VAL ASN GLU SEQRES 6 B 103 VAL ASP VAL SER GLU VAL SER HIS SER LYS ALA VAL GLU SEQRES 7 B 103 ALA LEU LYS GLU ALA GLY SER ILE VAL ARG LEU TYR VAL SEQRES 8 B 103 ARG ARG ARG ARG PRO ILE LEU GLY THR SER ILE LEU HET SO4 B 201 5 HET ACT B 202 7 HETNAM SO4 SULFATE ION HETNAM ACT ACETATE ION FORMUL 3 SO4 O4 S 2- FORMUL 4 ACT C2 H3 O2 1- FORMUL 5 HOH *173(H2 O) HELIX 1 1 HIS A 120 ASP A 124 5 5 HELIX 2 2 GLY A 136 GLY A 142 1 7 HELIX 3 3 SER A 162 ALA A 173 1 12 HELIX 4 4 GLY B 136 GLY B 142 1 7 HELIX 5 5 SER B 162 GLU B 172 1 11 SHEET 1 A 5 PHE A 94 GLU A 102 0 SHEET 2 A 5 ILE A 176 ARG A 184 -1 O LEU A 179 N ILE A 99 SHEET 3 A 5 CYS A 149 VAL A 153 -1 N LEU A 151 O TYR A 180 SHEET 4 A 5 ILE A 127 ILE A 132 -1 N ILE A 127 O ILE A 150 SHEET 5 A 5 PHE A 110 ALA A 113 -1 N ALA A 113 O PHE A 128 SHEET 1 B 4 PHE A 94 GLU A 102 0 SHEET 2 B 4 ILE A 176 ARG A 184 -1 O LEU A 179 N ILE A 99 SHEET 3 B 4 CYS A 149 VAL A 153 -1 N LEU A 151 O TYR A 180 SHEET 4 B 4 VAL A 156 ASP A 157 -1 O VAL A 156 N VAL A 153 SHEET 1 C 5 PHE B 94 GLU B 102 0 SHEET 2 C 5 ILE B 176 ARG B 184 -1 O LEU B 179 N ILE B 99 SHEET 3 C 5 CYS B 149 VAL B 153 -1 N LEU B 151 O TYR B 180 SHEET 4 C 5 ILE B 127 ILE B 132 -1 N ILE B 127 O ILE B 150 SHEET 5 C 5 PHE B 110 GLY B 114 -1 N ALA B 113 O PHE B 128 SHEET 1 D 4 PHE B 94 GLU B 102 0 SHEET 2 D 4 ILE B 176 ARG B 184 -1 O LEU B 179 N ILE B 99 SHEET 3 D 4 CYS B 149 VAL B 153 -1 N LEU B 151 O TYR B 180 SHEET 4 D 4 VAL B 156 ASP B 157 -1 O VAL B 156 N VAL B 153 CISPEP 1 SER A 91 PRO A 92 0 10.02 CISPEP 2 SER B 91 PRO B 92 0 -12.35 SITE 1 AC1 5 HIS A 120 ILE A 121 ARG A 185 HIS B 120 SITE 2 AC1 5 ILE B 121 SITE 1 AC2 4 LYS B 165 GLY B 174 SER B 175 HOH B 334 CRYST1 33.200 45.550 104.240 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.030120 0.000000 0.000000 0.00000 SCALE2 0.000000 0.021954 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009593 0.00000