HEADER OXIDOREDUCTASE 18-SEP-12 4H4X TITLE CRYSTAL STRUCTURE OF FERREDOXIN REDUCTASE, BPHA4 E175A/T176R/Q177G TITLE 2 MUTANT (OXIDIZED FORM) COMPND MOL_ID: 1; COMPND 2 MOLECULE: BIPHENYL DIOXYGENASE FERREDOXIN REDUCTASE SUBUNIT; COMPND 3 CHAIN: A; COMPND 4 EC: 1.18.1.3; COMPND 5 ENGINEERED: YES; COMPND 6 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ACIDOVORAX; SOURCE 3 ORGANISM_TAXID: 358220; SOURCE 4 STRAIN: KKS102; SOURCE 5 GENE: BPHA4; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS FLAVOPROTEIN, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR A.NISHIZAWA,A.HARADA,M.SENDA,Y.TACHIHARA,D.MURAMATSU,S.KISHIGAMI, AUTHOR 2 S.MORI,K.SUGIYAMA,T.SENDA,S.KIMURA REVDAT 3 08-NOV-23 4H4X 1 REMARK SEQADV REVDAT 2 15-NOV-17 4H4X 1 REMARK REVDAT 1 09-OCT-13 4H4X 0 JRNL AUTH A.NISHIZAWA,A.HARADA,M.SENDA,Y.TACHIHARA,D.MURAMATSU, JRNL AUTH 2 S.KISHIGAMI,S.MORI,K.SUGIYAMA,T.SENDA,S.KIMURA JRNL TITL RANDOM MUTAGENESIS WITH THE PROJECT ASSESSMENT FOR COMPLETE JRNL TITL 2 CONVERSION OF CO-FACTOR SPECIFICITY OF A FERREDOXIN JRNL TITL 3 REDUCTASE BPHA4 JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.58 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.990 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.4 REMARK 3 NUMBER OF REFLECTIONS : 76898 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.191 REMARK 3 FREE R VALUE : 0.217 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 3846 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.5816 - 4.4826 0.99 2993 158 0.1779 0.1880 REMARK 3 2 4.4826 - 3.5650 1.00 2879 152 0.1673 0.2003 REMARK 3 3 3.5650 - 3.1164 1.00 2825 148 0.1856 0.2189 REMARK 3 4 3.1164 - 2.8324 0.99 2782 147 0.2127 0.2363 REMARK 3 5 2.8324 - 2.6299 1.00 2766 145 0.2086 0.2412 REMARK 3 6 2.6299 - 2.4752 0.99 2760 146 0.2046 0.2089 REMARK 3 7 2.4752 - 2.3514 0.99 2738 144 0.1977 0.2207 REMARK 3 8 2.3514 - 2.2492 0.99 2732 144 0.1909 0.2218 REMARK 3 9 2.2492 - 2.1627 0.99 2724 143 0.1854 0.2231 REMARK 3 10 2.1627 - 2.0882 0.99 2701 142 0.1901 0.2025 REMARK 3 11 2.0882 - 2.0230 0.99 2705 142 0.1865 0.2057 REMARK 3 12 2.0230 - 1.9652 0.99 2687 142 0.1963 0.2242 REMARK 3 13 1.9652 - 1.9135 0.98 2686 141 0.1966 0.2482 REMARK 3 14 1.9135 - 1.8669 0.98 2693 142 0.1969 0.2031 REMARK 3 15 1.8669 - 1.8245 0.98 2667 140 0.2008 0.2536 REMARK 3 16 1.8245 - 1.7857 0.98 2654 140 0.1936 0.2380 REMARK 3 17 1.7857 - 1.7500 0.98 2689 142 0.1961 0.2385 REMARK 3 18 1.7500 - 1.7170 0.98 2657 139 0.1933 0.2054 REMARK 3 19 1.7170 - 1.6863 0.98 2644 140 0.1977 0.2527 REMARK 3 20 1.6863 - 1.6577 0.98 2659 139 0.1904 0.2394 REMARK 3 21 1.6577 - 1.6310 0.98 2641 139 0.1951 0.2002 REMARK 3 22 1.6310 - 1.6059 0.97 2625 139 0.1892 0.2123 REMARK 3 23 1.6059 - 1.5823 0.97 2651 139 0.1904 0.2137 REMARK 3 24 1.5823 - 1.5600 0.97 2621 138 0.1969 0.2083 REMARK 3 25 1.5600 - 1.5390 0.97 2622 138 0.1933 0.2451 REMARK 3 26 1.5390 - 1.5190 0.97 2629 138 0.2030 0.2118 REMARK 3 27 1.5190 - 1.5000 0.97 2622 139 0.2113 0.2091 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 19.530 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 15.33 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.97 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3095 REMARK 3 ANGLE : 1.190 4221 REMARK 3 CHIRALITY : 0.073 492 REMARK 3 PLANARITY : 0.006 551 REMARK 3 DIHEDRAL : 13.983 1108 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4H4X COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 27-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000075023. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-AUG-12 REMARK 200 TEMPERATURE (KELVIN) : 95 REMARK 200 PH : 5.2 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : APS REMARK 200 BEAMLINE : 23-ID-B REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97948 REMARK 200 MONOCHROMATOR : S1 111 REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-300 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 76902 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 19.580 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.58 REMARK 200 COMPLETENESS FOR SHELL (%) : 97.1 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: 2GQW REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.37 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 2.5M SODIUM FORMATE, 0.1M ACETATE REMARK 280 BUFFER, PH 5.2, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 61 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+5/6 REMARK 290 6555 X-Y,X,Z+1/6 REMARK 290 7555 Y,X,-Z+1/3 REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z+2/3 REMARK 290 10555 -Y,-X,-Z+5/6 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/6 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 56.93467 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 113.86933 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 85.40200 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 142.33667 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 28.46733 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 56.93467 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 113.86933 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 142.33667 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 85.40200 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 28.46733 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 -0.866025 0.000000 -49.10750 REMARK 350 BIOMT2 2 -0.866025 -0.500000 0.000000 -85.05669 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -28.46733 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 SER A 2 REMARK 465 GLN A 3 REMARK 465 GLU A 4 REMARK 465 VAL A 406 REMARK 465 ALA A 407 REMARK 465 ALA A 408 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 LYS A 69 CG CD CE NZ REMARK 470 GLN A 120 CD OE1 NE2 REMARK 470 ARG A 176 NE CZ NH1 NH2 REMARK 470 ARG A 183 CG CD NE CZ NH1 NH2 REMARK 470 LEU A 238 CG CD1 CD2 REMARK 470 GLU A 344 CG CD OE1 OE2 REMARK 470 ASP A 348 CG OD1 OD2 REMARK 470 LYS A 359 CD CE NZ REMARK 470 ARG A 372 CD NE CZ NH1 NH2 REMARK 470 ARG A 379 CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 LYS A 53 -122.54 -127.24 REMARK 500 ARG A 130 -42.75 -130.54 REMARK 500 ASP A 215 55.07 39.57 REMARK 500 ASP A 252 88.68 -160.56 REMARK 500 LYS A 351 107.98 -169.42 REMARK 500 ASN A 370 65.41 -151.96 REMARK 500 LYS A 386 76.68 -118.65 REMARK 500 THR A 397 129.88 -37.67 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FAD A 501 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 502 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 503 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 504 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 505 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 506 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 507 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 508 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 509 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMT A 510 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4H4P RELATED DB: PDB REMARK 900 RELATED ID: 4H4Q RELATED DB: PDB REMARK 900 RELATED ID: 4H4R RELATED DB: PDB REMARK 900 RELATED ID: 4H4S RELATED DB: PDB REMARK 900 RELATED ID: 4H4T RELATED DB: PDB REMARK 900 RELATED ID: 4H4U RELATED DB: PDB REMARK 900 RELATED ID: 4H4V RELATED DB: PDB REMARK 900 RELATED ID: 4H4W RELATED DB: PDB REMARK 900 RELATED ID: 4H4Y RELATED DB: PDB REMARK 900 RELATED ID: 4H4Z RELATED DB: PDB REMARK 900 RELATED ID: 4H50 RELATED DB: PDB DBREF 4H4X A 1 408 UNP E7FJB9 E7FJB9_9BURK 1 408 SEQADV 4H4X ALA A 175 UNP E7FJB9 GLU 175 ENGINEERED MUTATION SEQADV 4H4X ARG A 176 UNP E7FJB9 THR 176 ENGINEERED MUTATION SEQADV 4H4X GLY A 177 UNP E7FJB9 GLN 177 ENGINEERED MUTATION SEQRES 1 A 408 MET SER GLN GLU ALA LEU LYS ALA PRO VAL VAL VAL LEU SEQRES 2 A 408 GLY ALA GLY LEU ALA SER VAL SER PHE VAL ALA GLU LEU SEQRES 3 A 408 ARG GLN ALA GLY TYR GLN GLY LEU ILE THR VAL VAL GLY SEQRES 4 A 408 ASP GLU ALA GLU ARG PRO TYR ASP ARG PRO PRO LEU SER SEQRES 5 A 408 LYS ASP PHE MET ALA HIS GLY ASP ALA GLU LYS ILE ARG SEQRES 6 A 408 LEU ASP CYS LYS ARG ALA PRO GLU VAL GLU TRP LEU LEU SEQRES 7 A 408 GLY VAL THR ALA GLN SER PHE ASP PRO GLN ALA HIS THR SEQRES 8 A 408 VAL ALA LEU SER ASP GLY ARG THR LEU PRO TYR GLY THR SEQRES 9 A 408 LEU VAL LEU ALA THR GLY ALA ALA PRO ARG ALA LEU PRO SEQRES 10 A 408 THR LEU GLN GLY ALA THR MET PRO VAL HIS THR LEU ARG SEQRES 11 A 408 THR LEU GLU ASP ALA ARG ARG ILE GLN ALA GLY LEU ARG SEQRES 12 A 408 PRO GLN SER ARG LEU LEU ILE VAL GLY GLY GLY VAL ILE SEQRES 13 A 408 GLY LEU GLU LEU ALA ALA THR ALA ARG THR ALA GLY VAL SEQRES 14 A 408 HIS VAL SER LEU VAL ALA ARG GLY PRO ARG LEU MET SER SEQRES 15 A 408 ARG ALA ALA PRO ALA THR LEU ALA ASP PHE VAL ALA ARG SEQRES 16 A 408 TYR HIS ALA ALA GLN GLY VAL ASP LEU ARG PHE GLU ARG SEQRES 17 A 408 SER VAL THR GLY SER VAL ASP GLY VAL VAL LEU LEU ASP SEQRES 18 A 408 ASP GLY THR ARG ILE ALA ALA ASP MET VAL VAL VAL GLY SEQRES 19 A 408 ILE GLY VAL LEU ALA ASN ASP ALA LEU ALA ARG ALA ALA SEQRES 20 A 408 GLY LEU ALA CYS ASP ASP GLY ILE PHE VAL ASP ALA TYR SEQRES 21 A 408 GLY ARG THR THR CYS PRO ASP VAL TYR ALA LEU GLY ASP SEQRES 22 A 408 VAL THR ARG GLN ARG ASN PRO LEU SER GLY ARG PHE GLU SEQRES 23 A 408 ARG ILE GLU THR TRP SER ASN ALA GLN ASN GLN GLY ILE SEQRES 24 A 408 ALA VAL ALA ARG HIS LEU VAL ASP PRO THR ALA PRO GLY SEQRES 25 A 408 TYR ALA GLU LEU PRO TRP TYR TRP SER ASP GLN GLY ALA SEQRES 26 A 408 LEU ARG ILE GLN VAL ALA GLY LEU ALA SER GLY ASP GLU SEQRES 27 A 408 GLU ILE VAL ARG GLY GLU VAL SER LEU ASP ALA PRO LYS SEQRES 28 A 408 PHE THR LEU ILE GLU LEU GLN LYS GLY ARG ILE VAL GLY SEQRES 29 A 408 ALA THR CYS VAL ASN ASN ALA ARG ASP PHE ALA PRO LEU SEQRES 30 A 408 ARG ARG LEU LEU ALA VAL GLY ALA LYS PRO ASP ARG ALA SEQRES 31 A 408 ALA LEU ALA ASP PRO ALA THR ASP LEU ARG LYS LEU ALA SEQRES 32 A 408 ALA ALA VAL ALA ALA HET FAD A 501 53 HET GOL A 502 6 HET FMT A 503 3 HET FMT A 504 3 HET FMT A 505 3 HET FMT A 506 3 HET FMT A 507 3 HET FMT A 508 3 HET FMT A 509 3 HET FMT A 510 3 HETNAM FAD FLAVIN-ADENINE DINUCLEOTIDE HETNAM GOL GLYCEROL HETNAM FMT FORMIC ACID HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 FAD C27 H33 N9 O15 P2 FORMUL 3 GOL C3 H8 O3 FORMUL 4 FMT 8(C H2 O2) FORMUL 12 HOH *312(H2 O) HELIX 1 1 GLY A 16 GLY A 30 1 15 HELIX 2 2 ARG A 48 SER A 52 5 5 HELIX 3 3 LYS A 53 GLY A 59 1 7 HELIX 4 4 ASP A 60 ILE A 64 5 5 HELIX 5 5 LEU A 116 GLN A 120 5 5 HELIX 6 6 THR A 131 LEU A 142 1 12 HELIX 7 7 GLY A 154 ALA A 167 1 14 HELIX 8 8 PRO A 186 GLN A 200 1 15 HELIX 9 9 ASP A 241 GLY A 248 1 8 HELIX 10 10 THR A 290 ASP A 307 1 18 HELIX 11 11 ASN A 370 VAL A 383 1 14 HELIX 12 12 ASP A 388 ASP A 394 1 7 HELIX 13 13 ASP A 398 ALA A 405 1 8 SHEET 1 A 5 GLU A 75 LEU A 78 0 SHEET 2 A 5 ILE A 35 GLY A 39 1 N VAL A 37 O LEU A 77 SHEET 3 A 5 VAL A 10 LEU A 13 1 N VAL A 12 O VAL A 38 SHEET 4 A 5 THR A 104 LEU A 107 1 O VAL A 106 N LEU A 13 SHEET 5 A 5 VAL A 268 ALA A 270 1 O TYR A 269 N LEU A 107 SHEET 1 B 3 ALA A 82 ASP A 86 0 SHEET 2 B 3 THR A 91 LEU A 94 -1 O ALA A 93 N GLN A 83 SHEET 3 B 3 THR A 99 PRO A 101 -1 O LEU A 100 N VAL A 92 SHEET 1 C 2 ALA A 111 PRO A 113 0 SHEET 2 C 2 VAL A 237 ALA A 239 -1 O LEU A 238 N ALA A 112 SHEET 1 D 5 VAL A 126 THR A 128 0 SHEET 2 D 5 MET A 230 VAL A 233 1 O VAL A 233 N HIS A 127 SHEET 3 D 5 ARG A 147 VAL A 151 1 N LEU A 149 O VAL A 232 SHEET 4 D 5 HIS A 170 ALA A 175 1 O HIS A 170 N LEU A 148 SHEET 5 D 5 ASP A 203 PHE A 206 1 O ARG A 205 N LEU A 173 SHEET 1 E 3 VAL A 210 VAL A 214 0 SHEET 2 E 3 VAL A 217 LEU A 220 -1 O LEU A 219 N GLY A 212 SHEET 3 E 3 ARG A 225 ALA A 227 -1 O ILE A 226 N VAL A 218 SHEET 1 F 3 ILE A 255 PHE A 256 0 SHEET 2 F 3 THR A 275 ASN A 279 1 O ARG A 276 N ILE A 255 SHEET 3 F 3 ARG A 284 GLU A 286 -1 O GLU A 286 N GLN A 277 SHEET 1 G 5 TRP A 318 GLN A 323 0 SHEET 2 G 5 LEU A 326 GLY A 332 -1 O ILE A 328 N SER A 321 SHEET 3 G 5 ARG A 361 VAL A 368 -1 O ALA A 365 N ALA A 331 SHEET 4 G 5 PHE A 352 GLN A 358 -1 N GLU A 356 O VAL A 363 SHEET 5 G 5 GLU A 338 ARG A 342 -1 N ARG A 342 O THR A 353 CISPEP 1 ALA A 8 PRO A 9 0 -2.63 SITE 1 AC1 36 GLY A 14 GLY A 16 LEU A 17 ALA A 18 SITE 2 AC1 36 VAL A 38 ASP A 40 GLU A 41 ARG A 48 SITE 3 AC1 36 PRO A 49 SER A 52 LYS A 53 VAL A 80 SITE 4 AC1 36 ALA A 82 ALA A 108 THR A 109 GLY A 110 SITE 5 AC1 36 ARG A 130 ILE A 156 GLY A 272 ASP A 273 SITE 6 AC1 36 GLU A 289 THR A 290 TRP A 291 ALA A 294 SITE 7 AC1 36 TYR A 319 TRP A 320 HOH A 601 HOH A 603 SITE 8 AC1 36 HOH A 606 HOH A 608 HOH A 609 HOH A 626 SITE 9 AC1 36 HOH A 648 HOH A 669 HOH A 682 HOH A 687 SITE 1 AC2 9 PRO A 113 THR A 128 LEU A 129 VAL A 233 SITE 2 AC2 9 GLY A 234 ILE A 235 GLY A 236 FMT A 508 SITE 3 AC2 9 HOH A 628 SITE 1 AC3 4 ALA A 115 LEU A 116 HOH A 891 HOH A 906 SITE 1 AC4 5 VAL A 217 ARG A 225 TRP A 320 HOH A 662 SITE 2 AC4 5 HOH A 860 SITE 1 AC5 7 THR A 109 ASN A 240 ASP A 241 ALA A 242 SITE 2 AC5 7 LEU A 243 ALA A 244 HOH A 648 SITE 1 AC6 6 ASP A 54 PHE A 55 HIS A 58 GLY A 59 SITE 2 AC6 6 ASP A 60 ASP A 215 SITE 1 AC7 7 ALA A 122 THR A 123 MET A 124 SER A 213 SITE 2 AC7 7 VAL A 214 ASP A 215 GLY A 216 SITE 1 AC8 6 VAL A 155 ILE A 156 GOL A 502 HOH A 737 SITE 2 AC8 6 HOH A 750 HOH A 773 SITE 1 AC9 6 ARG A 327 ASN A 369 ASN A 370 ALA A 371 SITE 2 AC9 6 HOH A 832 HOH A 877 SITE 1 BC1 6 ALA A 162 TYR A 196 HIS A 197 GLN A 200 SITE 2 BC1 6 VAL A 202 HOH A 870 CRYST1 98.215 98.215 170.804 90.00 90.00 120.00 P 61 2 2 12 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.010182 0.005878 0.000000 0.00000 SCALE2 0.000000 0.011757 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005855 0.00000