HEADER OXIDOREDUCTASE 19-SEP-12 4H6K TITLE W116I MUTANT OF OYE1 COMPND MOL_ID: 1; COMPND 2 MOLECULE: NADPH DEHYDROGENASE 1; COMPND 3 CHAIN: A; COMPND 4 SYNONYM: OLD YELLOW ENZYME 1; COMPND 5 EC: 1.6.99.1; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES PASTORIANUS; SOURCE 3 ORGANISM_COMMON: LAGER YEAST; SOURCE 4 ORGANISM_TAXID: 27292; SOURCE 5 GENE: OYE1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3)GOLD; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET KEYWDS CARVONE, ENANTIOSELECTIVITY, FLIPPED BINDING MODE, ENOATE REDUCTASE, KEYWDS 2 BIOCATALYSIS, ALKENE REDUCTASE, SEMI RATIONAL DESIGN, TIM BARREL, KEYWDS 3 ALPHA/BETA BARREL, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR Y.A.POMPEU,J.D.STEWART REVDAT 3 29-NOV-23 4H6K 1 REMARK REVDAT 2 20-SEP-23 4H6K 1 REMARK SEQADV LINK REVDAT 1 09-OCT-13 4H6K 0 JRNL AUTH Y.A.POMPEU,B.SULLIVAN,J.D.STEWART JRNL TITL X‑RAY CRYSTALLOGRAPHY REVEALS HOW SUBTLE CHANGES JRNL TITL 2 CONTROL THE ORIENTATION OF SUBSTRATE BINDING IN AN ALKENE JRNL TITL 3 REDUCTASE JRNL REF ACS CATALYSIS V. 3 2376 2013 JRNL REFN ESSN 2155-5435 JRNL DOI 10.1021/CS400622E REMARK 2 REMARK 2 RESOLUTION. 1.55 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8_1069) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.55 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 31.51 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.340 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 3 NUMBER OF REFLECTIONS : 62493 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.184 REMARK 3 R VALUE (WORKING SET) : 0.182 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 10.000 REMARK 3 FREE R VALUE TEST SET COUNT : 6248 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 31.5194 - 4.8108 0.99 2065 229 0.1985 0.1979 REMARK 3 2 4.8108 - 3.8206 1.00 1956 217 0.1511 0.1573 REMARK 3 3 3.8206 - 3.3382 1.00 1931 215 0.1580 0.1821 REMARK 3 4 3.3382 - 3.0333 1.00 1896 210 0.1765 0.1613 REMARK 3 5 3.0333 - 2.8160 1.00 1909 213 0.1658 0.1860 REMARK 3 6 2.8160 - 2.6501 1.00 1884 210 0.1666 0.2215 REMARK 3 7 2.6501 - 2.5174 1.00 1886 210 0.1692 0.2138 REMARK 3 8 2.5174 - 2.4079 1.00 1896 209 0.1721 0.2045 REMARK 3 9 2.4079 - 2.3152 1.00 1871 208 0.1749 0.2016 REMARK 3 10 2.3152 - 2.2353 1.00 1854 207 0.1727 0.2033 REMARK 3 11 2.2353 - 2.1655 1.00 1880 208 0.1691 0.1892 REMARK 3 12 2.1655 - 2.1036 1.00 1876 208 0.1840 0.2068 REMARK 3 13 2.1036 - 2.0482 1.00 1877 208 0.1772 0.2182 REMARK 3 14 2.0482 - 1.9982 1.00 1855 206 0.1877 0.2368 REMARK 3 15 1.9982 - 1.9528 1.00 1870 208 0.1947 0.2160 REMARK 3 16 1.9528 - 1.9113 1.00 1848 205 0.1986 0.2420 REMARK 3 17 1.9113 - 1.8730 1.00 1872 209 0.1937 0.2301 REMARK 3 18 1.8730 - 1.8377 1.00 1847 205 0.2022 0.2287 REMARK 3 19 1.8377 - 1.8049 1.00 1860 207 0.2032 0.2310 REMARK 3 20 1.8049 - 1.7743 1.00 1837 204 0.2078 0.2545 REMARK 3 21 1.7743 - 1.7457 1.00 1869 207 0.2162 0.2297 REMARK 3 22 1.7457 - 1.7188 1.00 1852 206 0.2162 0.2443 REMARK 3 23 1.7188 - 1.6935 1.00 1827 203 0.2162 0.2713 REMARK 3 24 1.6935 - 1.6697 1.00 1882 209 0.2364 0.2508 REMARK 3 25 1.6697 - 1.6471 1.00 1828 203 0.2509 0.3159 REMARK 3 26 1.6471 - 1.6257 1.00 1853 207 0.2630 0.3175 REMARK 3 27 1.6257 - 1.6054 1.00 1856 206 0.2684 0.3196 REMARK 3 28 1.6054 - 1.5861 1.00 1839 203 0.2622 0.2941 REMARK 3 29 1.5861 - 1.5676 0.99 1805 201 0.2858 0.3159 REMARK 3 30 1.5676 - 1.5500 1.00 1864 207 0.2872 0.3149 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 21.270 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 25.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.006 3359 REMARK 3 ANGLE : 1.047 4556 REMARK 3 CHIRALITY : 0.081 468 REMARK 3 PLANARITY : 0.004 595 REMARK 3 DIHEDRAL : 16.046 1244 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 9 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 1 THROUGH 32 ) REMARK 3 ORIGIN FOR THE GROUP (A): -18.0232 44.6275 -0.9644 REMARK 3 T TENSOR REMARK 3 T11: 0.2087 T22: 0.3051 REMARK 3 T33: 0.1408 T12: -0.0424 REMARK 3 T13: 0.0203 T23: -0.0251 REMARK 3 L TENSOR REMARK 3 L11: 0.2726 L22: 0.2985 REMARK 3 L33: 0.0742 L12: 0.1983 REMARK 3 L13: 0.1336 L23: 0.1828 REMARK 3 S TENSOR REMARK 3 S11: 0.1272 S12: -0.0968 S13: 0.1060 REMARK 3 S21: 0.1571 S22: -0.1991 S23: 0.1136 REMARK 3 S31: -0.1091 S32: -0.0095 S33: -0.0024 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 33 THROUGH 90 ) REMARK 3 ORIGIN FOR THE GROUP (A): 4.8098 42.2727 -3.8539 REMARK 3 T TENSOR REMARK 3 T11: 0.1596 T22: 0.2081 REMARK 3 T33: 0.2225 T12: -0.0266 REMARK 3 T13: -0.0129 T23: 0.0044 REMARK 3 L TENSOR REMARK 3 L11: 0.2237 L22: 0.1744 REMARK 3 L33: 0.3182 L12: 0.1706 REMARK 3 L13: 0.3038 L23: 0.2374 REMARK 3 S TENSOR REMARK 3 S11: 0.1967 S12: -0.0419 S13: -0.0500 REMARK 3 S21: 0.1141 S22: -0.1265 S23: -0.2343 REMARK 3 S31: -0.0531 S32: 0.0043 S33: 0.0131 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 91 THROUGH 130 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.2769 38.1888 -1.4110 REMARK 3 T TENSOR REMARK 3 T11: 0.1678 T22: 0.2707 REMARK 3 T33: 0.2644 T12: -0.0520 REMARK 3 T13: -0.0263 T23: -0.0233 REMARK 3 L TENSOR REMARK 3 L11: 0.3627 L22: 0.5236 REMARK 3 L33: 0.1581 L12: 0.1354 REMARK 3 L13: 0.3169 L23: 0.1178 REMARK 3 S TENSOR REMARK 3 S11: 0.1985 S12: -0.0846 S13: -0.3381 REMARK 3 S21: 0.2848 S22: -0.1288 S23: -0.5064 REMARK 3 S31: 0.1042 S32: -0.0394 S33: 0.0168 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 131 THROUGH 162 ) REMARK 3 ORIGIN FOR THE GROUP (A): 11.7740 24.5137 -21.1157 REMARK 3 T TENSOR REMARK 3 T11: 0.1974 T22: 0.3778 REMARK 3 T33: 0.6913 T12: 0.0382 REMARK 3 T13: 0.0251 T23: -0.2136 REMARK 3 L TENSOR REMARK 3 L11: 0.2147 L22: 0.4380 REMARK 3 L33: 0.1411 L12: 0.0734 REMARK 3 L13: 0.1463 L23: 0.0410 REMARK 3 S TENSOR REMARK 3 S11: -0.1275 S12: 0.5332 S13: -0.4502 REMARK 3 S21: -0.3068 S22: 0.1151 S23: -0.6318 REMARK 3 S31: 0.0987 S32: 0.3495 S33: -0.0091 REMARK 3 TLS GROUP : 5 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 163 THROUGH 183 ) REMARK 3 ORIGIN FOR THE GROUP (A): 9.3408 23.4675 0.5643 REMARK 3 T TENSOR REMARK 3 T11: 0.1939 T22: 0.2624 REMARK 3 T33: 0.5931 T12: -0.0413 REMARK 3 T13: -0.3737 T23: 0.0990 REMARK 3 L TENSOR REMARK 3 L11: 0.2806 L22: 0.1389 REMARK 3 L33: 0.2330 L12: 0.1813 REMARK 3 L13: -0.1036 L23: -0.1116 REMARK 3 S TENSOR REMARK 3 S11: 0.2634 S12: -0.2495 S13: -0.7220 REMARK 3 S21: 0.2855 S22: -0.0107 S23: -0.3560 REMARK 3 S31: 0.0096 S32: 0.1613 S33: 0.2388 REMARK 3 TLS GROUP : 6 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 184 THROUGH 277 ) REMARK 3 ORIGIN FOR THE GROUP (A): -3.7485 21.0228 -7.3078 REMARK 3 T TENSOR REMARK 3 T11: 0.2143 T22: 0.2002 REMARK 3 T33: 0.3918 T12: -0.0339 REMARK 3 T13: -0.0887 T23: -0.0052 REMARK 3 L TENSOR REMARK 3 L11: 1.0230 L22: 0.4448 REMARK 3 L33: 0.3196 L12: 0.8434 REMARK 3 L13: -0.0558 L23: 0.1082 REMARK 3 S TENSOR REMARK 3 S11: 0.1657 S12: 0.0067 S13: -0.5944 REMARK 3 S21: 0.1491 S22: -0.0631 S23: -0.4642 REMARK 3 S31: 0.1374 S32: -0.0319 S33: 0.1189 REMARK 3 TLS GROUP : 7 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 278 THROUGH 303 ) REMARK 3 ORIGIN FOR THE GROUP (A): -10.1773 32.7392 -10.3304 REMARK 3 T TENSOR REMARK 3 T11: 0.2066 T22: 0.2894 REMARK 3 T33: 0.1753 T12: -0.1139 REMARK 3 T13: -0.0094 T23: 0.0131 REMARK 3 L TENSOR REMARK 3 L11: 0.8823 L22: 0.7010 REMARK 3 L33: 0.5736 L12: -0.2970 REMARK 3 L13: 0.0364 L23: 0.5085 REMARK 3 S TENSOR REMARK 3 S11: 0.3906 S12: 0.3905 S13: -0.0381 REMARK 3 S21: -0.1135 S22: -0.4082 S23: -0.2585 REMARK 3 S31: -0.3493 S32: 0.0293 S33: -0.0007 REMARK 3 TLS GROUP : 8 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 304 THROUGH 362 ) REMARK 3 ORIGIN FOR THE GROUP (A): -17.3521 37.5888 -6.5214 REMARK 3 T TENSOR REMARK 3 T11: 0.1715 T22: 0.2353 REMARK 3 T33: 0.1135 T12: -0.0344 REMARK 3 T13: -0.0053 T23: -0.0189 REMARK 3 L TENSOR REMARK 3 L11: 0.4824 L22: 0.2677 REMARK 3 L33: 0.1971 L12: 0.2063 REMARK 3 L13: 0.1944 L23: 0.1154 REMARK 3 S TENSOR REMARK 3 S11: 0.0837 S12: 0.0167 S13: 0.0319 REMARK 3 S21: -0.0725 S22: -0.0486 S23: 0.0578 REMARK 3 S31: 0.0048 S32: -0.1513 S33: 0.0161 REMARK 3 TLS GROUP : 9 REMARK 3 SELECTION: CHAIN 'A' AND (RESID 363 THROUGH 399 ) REMARK 3 ORIGIN FOR THE GROUP (A): -5.4216 55.1362 -11.1522 REMARK 3 T TENSOR REMARK 3 T11: 0.1988 T22: 0.2434 REMARK 3 T33: 0.2103 T12: 0.0089 REMARK 3 T13: 0.0333 T23: -0.0036 REMARK 3 L TENSOR REMARK 3 L11: 0.1175 L22: 0.1188 REMARK 3 L33: 0.0513 L12: 0.1267 REMARK 3 L13: 0.0939 L23: 0.0835 REMARK 3 S TENSOR REMARK 3 S11: 0.0810 S12: 0.1583 S13: 0.2569 REMARK 3 S21: -0.0771 S22: -0.1010 S23: -0.1221 REMARK 3 S31: -0.0839 S32: -0.0425 S33: -0.0000 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4H6K COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 28-SEP-12. REMARK 100 THE DEPOSITION ID IS D_1000075082. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-AUG-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 8.3 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : NSLS REMARK 200 BEAMLINE : X6A REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : SI (111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 270 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 62580 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.550 REMARK 200 RESOLUTION RANGE LOW (A) : 32.320 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.9 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.08000 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 14.2000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.55 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.63 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.8 REMARK 200 DATA REDUNDANCY IN SHELL : 8.70 REMARK 200 R MERGE FOR SHELL (I) : 0.91600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.100 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 3RND REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.65 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.35 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1M HEPES, 0.2M MGCL2, PEG400 35%, PH REMARK 280 8.3, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 43 21 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z+1/2 REMARK 290 3555 -Y+1/2,X+1/2,Z+3/4 REMARK 290 4555 Y+1/2,-X+1/2,Z+1/4 REMARK 290 5555 -X+1/2,Y+1/2,-Z+3/4 REMARK 290 6555 X+1/2,-Y+1/2,-Z+1/4 REMARK 290 7555 Y,X,-Z REMARK 290 8555 -Y,-X,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 21.23000 REMARK 290 SMTRY1 3 0.000000 -1.000000 0.000000 70.46500 REMARK 290 SMTRY2 3 1.000000 0.000000 0.000000 70.46500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 31.84500 REMARK 290 SMTRY1 4 0.000000 1.000000 0.000000 70.46500 REMARK 290 SMTRY2 4 -1.000000 0.000000 0.000000 70.46500 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 10.61500 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 70.46500 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 70.46500 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 31.84500 REMARK 290 SMTRY1 6 1.000000 0.000000 0.000000 70.46500 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 70.46500 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 10.61500 REMARK 290 SMTRY1 7 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY2 7 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 21.23000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.000000 -1.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 -21.23000 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O HOH A 615 O HOH A 721 2.06 REMARK 500 O HOH A 661 O HOH A 721 2.18 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 5 53.44 -99.42 REMARK 500 TYR A 382 -59.80 -130.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 610 REMARK 610 MISSING HETEROATOM REMARK 610 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 610 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 610 I=INSERTION CODE): REMARK 610 M RES C SSEQI REMARK 610 1PE A 404 REMARK 610 1PE A 405 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MG A 403 MG REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HOH A 569 O REMARK 620 2 HOH A 586 O 93.4 REMARK 620 3 HOH A 657 O 167.9 79.8 REMARK 620 4 HOH A 658 O 94.1 86.9 95.5 REMARK 620 5 HOH A 768 O 88.0 177.4 99.1 90.9 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MG A 403 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 404 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1PE A 405 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 3RND RELATED DB: PDB REMARK 900 RELATED ID: 3TX9 RELATED DB: PDB REMARK 900 RELATED ID: 3TXZ RELATED DB: PDB REMARK 900 RELATED ID: 4GBU RELATED DB: PDB REMARK 900 RELATED ID: 4GE8 RELATED DB: PDB REMARK 900 RELATED ID: 4GWE RELATED DB: PDB REMARK 900 RELATED ID: 4GXM RELATED DB: PDB REMARK 900 RELATED ID: 4H4I RELATED DB: PDB REMARK 900 RELATED ID: 4K7V RELATED DB: PDB REMARK 900 RELATED ID: 4K7Y RELATED DB: PDB REMARK 900 RELATED ID: 4K8E RELATED DB: PDB REMARK 900 RELATED ID: 4K8H RELATED DB: PDB DBREF 4H6K A 1 399 UNP Q02899 OYE1_SACPS 2 400 SEQADV 4H6K ILE A 116 UNP Q02899 TRP 117 ENGINEERED MUTATION SEQRES 1 A 399 SER PHE VAL LYS ASP PHE LYS PRO GLN ALA LEU GLY ASP SEQRES 2 A 399 THR ASN LEU PHE LYS PRO ILE LYS ILE GLY ASN ASN GLU SEQRES 3 A 399 LEU LEU HIS ARG ALA VAL ILE PRO PRO LEU THR ARG MET SEQRES 4 A 399 ARG ALA LEU HIS PRO GLY ASN ILE PRO ASN ARG ASP TRP SEQRES 5 A 399 ALA VAL GLU TYR TYR THR GLN ARG ALA GLN ARG PRO GLY SEQRES 6 A 399 THR MET ILE ILE THR GLU GLY ALA PHE ILE SER PRO GLN SEQRES 7 A 399 ALA GLY GLY TYR ASP ASN ALA PRO GLY VAL TRP SER GLU SEQRES 8 A 399 GLU GLN MET VAL GLU TRP THR LYS ILE PHE ASN ALA ILE SEQRES 9 A 399 HIS GLU LYS LYS SER PHE VAL TRP VAL GLN LEU ILE VAL SEQRES 10 A 399 LEU GLY TRP ALA ALA PHE PRO ASP ASN LEU ALA ARG ASP SEQRES 11 A 399 GLY LEU ARG TYR ASP SER ALA SER ASP ASN VAL PHE MET SEQRES 12 A 399 ASP ALA GLU GLN GLU ALA LYS ALA LYS LYS ALA ASN ASN SEQRES 13 A 399 PRO GLN HIS SER LEU THR LYS ASP GLU ILE LYS GLN TYR SEQRES 14 A 399 ILE LYS GLU TYR VAL GLN ALA ALA LYS ASN SER ILE ALA SEQRES 15 A 399 ALA GLY ALA ASP GLY VAL GLU ILE HIS SER ALA ASN GLY SEQRES 16 A 399 TYR LEU LEU ASN GLN PHE LEU ASP PRO HIS SER ASN THR SEQRES 17 A 399 ARG THR ASP GLU TYR GLY GLY SER ILE GLU ASN ARG ALA SEQRES 18 A 399 ARG PHE THR LEU GLU VAL VAL ASP ALA LEU VAL GLU ALA SEQRES 19 A 399 ILE GLY HIS GLU LYS VAL GLY LEU ARG LEU SER PRO TYR SEQRES 20 A 399 GLY VAL PHE ASN SER MET SER GLY GLY ALA GLU THR GLY SEQRES 21 A 399 ILE VAL ALA GLN TYR ALA TYR VAL ALA GLY GLU LEU GLU SEQRES 22 A 399 LYS ARG ALA LYS ALA GLY LYS ARG LEU ALA PHE VAL HIS SEQRES 23 A 399 LEU VAL GLU PRO ARG VAL THR ASN PRO PHE LEU THR GLU SEQRES 24 A 399 GLY GLU GLY GLU TYR GLU GLY GLY SER ASN ASP PHE VAL SEQRES 25 A 399 TYR SER ILE TRP LYS GLY PRO VAL ILE ARG ALA GLY ASN SEQRES 26 A 399 PHE ALA LEU HIS PRO GLU VAL VAL ARG GLU GLU VAL LYS SEQRES 27 A 399 ASP LYS ARG THR LEU ILE GLY TYR GLY ARG PHE PHE ILE SEQRES 28 A 399 SER ASN PRO ASP LEU VAL ASP ARG LEU GLU LYS GLY LEU SEQRES 29 A 399 PRO LEU ASN LYS TYR ASP ARG ASP THR PHE TYR GLN MET SEQRES 30 A 399 SER ALA HIS GLY TYR ILE ASP TYR PRO THR TYR GLU GLU SEQRES 31 A 399 ALA LEU LYS LEU GLY TRP ASP LYS LYS HET FMN A 401 31 HET CL A 402 1 HET MG A 403 1 HET 1PE A 404 9 HET 1PE A 405 14 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM CL CHLORIDE ION HETNAM MG MAGNESIUM ION HETNAM 1PE PENTAETHYLENE GLYCOL HETSYN FMN RIBOFLAVIN MONOPHOSPHATE HETSYN 1PE PEG400 FORMUL 2 FMN C17 H21 N4 O9 P FORMUL 3 CL CL 1- FORMUL 4 MG MG 2+ FORMUL 5 1PE 2(C10 H22 O6) FORMUL 7 HOH *313(H2 O) HELIX 1 1 THR A 14 LYS A 18 5 5 HELIX 2 2 TRP A 52 ALA A 61 1 10 HELIX 3 3 SER A 90 LYS A 107 1 18 HELIX 4 4 LEU A 118 ALA A 122 5 5 HELIX 5 5 PHE A 123 ASP A 130 1 8 HELIX 6 6 ASP A 144 ASN A 155 1 12 HELIX 7 7 THR A 162 ALA A 183 1 22 HELIX 8 8 TYR A 196 ASP A 203 1 8 HELIX 9 9 SER A 216 ALA A 221 1 6 HELIX 10 10 ALA A 221 GLY A 236 1 16 HELIX 11 11 SER A 254 GLU A 258 5 5 HELIX 12 12 GLY A 260 ALA A 278 1 19 HELIX 13 13 ASP A 310 TRP A 316 1 7 HELIX 14 14 HIS A 329 VAL A 337 1 9 HELIX 15 15 GLY A 347 ASN A 353 1 7 HELIX 16 16 ASP A 355 GLY A 363 1 9 HELIX 17 17 ASP A 370 PHE A 374 5 5 HELIX 18 18 THR A 387 LEU A 394 1 8 HELIX 19 19 GLY A 395 LYS A 399 5 5 SHEET 1 A 2 ILE A 20 ILE A 22 0 SHEET 2 A 2 ASN A 25 LEU A 27 -1 O ASN A 25 N ILE A 22 SHEET 1 B 8 ALA A 31 VAL A 32 0 SHEET 2 B 8 THR A 342 GLY A 345 1 O ILE A 344 N VAL A 32 SHEET 3 B 8 VAL A 320 ALA A 323 1 N ARG A 322 O GLY A 345 SHEET 4 B 8 PHE A 284 VAL A 288 1 N LEU A 287 O ILE A 321 SHEET 5 B 8 VAL A 240 LEU A 244 1 N LEU A 242 O HIS A 286 SHEET 6 B 8 GLY A 187 HIS A 191 1 N ILE A 190 O GLY A 241 SHEET 7 B 8 PHE A 110 ILE A 116 1 N LEU A 115 O GLU A 189 SHEET 8 B 8 MET A 67 ILE A 69 1 N ILE A 68 O TRP A 112 SHEET 1 C 8 ALA A 31 VAL A 32 0 SHEET 2 C 8 THR A 342 GLY A 345 1 O ILE A 344 N VAL A 32 SHEET 3 C 8 VAL A 320 ALA A 323 1 N ARG A 322 O GLY A 345 SHEET 4 C 8 PHE A 284 VAL A 288 1 N LEU A 287 O ILE A 321 SHEET 5 C 8 VAL A 240 LEU A 244 1 N LEU A 242 O HIS A 286 SHEET 6 C 8 GLY A 187 HIS A 191 1 N ILE A 190 O GLY A 241 SHEET 7 C 8 PHE A 110 ILE A 116 1 N LEU A 115 O GLU A 189 SHEET 8 C 8 ALA A 73 PHE A 74 1 N ALA A 73 O ILE A 116 SHEET 1 D 2 TYR A 134 SER A 136 0 SHEET 2 D 2 GLN A 158 SER A 160 1 O HIS A 159 N TYR A 134 LINK MG MG A 403 O HOH A 569 1555 1555 2.04 LINK MG MG A 403 O HOH A 586 1555 1555 1.97 LINK MG MG A 403 O HOH A 657 1555 1555 2.28 LINK MG MG A 403 O HOH A 658 1555 1555 2.02 LINK MG MG A 403 O HOH A 768 1555 1555 2.06 CISPEP 1 HIS A 43 PRO A 44 0 2.85 SITE 1 AC1 20 PRO A 34 PRO A 35 LEU A 36 THR A 37 SITE 2 AC1 20 GLY A 72 GLN A 114 HIS A 191 ASN A 194 SITE 3 AC1 20 ARG A 243 GLY A 324 ASN A 325 TYR A 346 SITE 4 AC1 20 GLY A 347 ARG A 348 PHE A 374 TYR A 375 SITE 5 AC1 20 HOH A 503 HOH A 519 HOH A 528 HOH A 637 SITE 1 AC2 2 ASP A 83 ASN A 126 SITE 1 AC3 6 HOH A 569 HOH A 586 HOH A 649 HOH A 657 SITE 2 AC3 6 HOH A 658 HOH A 768 SITE 1 AC4 4 ASP A 370 HIS A 380 ASP A 384 HOH A 600 SITE 1 AC5 4 THR A 58 GLN A 62 LYS A 107 HOH A 574 CRYST1 140.930 140.930 42.460 90.00 90.00 90.00 P 43 21 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007096 0.000000 0.000000 0.00000 SCALE2 0.000000 0.007096 0.000000 0.00000 SCALE3 0.000000 0.000000 0.023552 0.00000