HEADER UNKNOWN FUNCTION 24-SEP-12 4H8T OBSLTE 03-JUL-13 4H8T 4L5H TITLE STRUCTURE OF HAZE FORMING PROTEINS IN WHITE WINES: VITIS VINIFERA TITLE 2 THAUMATIN-LIKE PROTEINS COMPND MOL_ID: 1; COMPND 2 MOLECULE: VVTL1; COMPND 3 CHAIN: A, B SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VITIS VINIFERA; SOURCE 3 ORGANISM_COMMON: WINE GRAPE; SOURCE 4 ORGANISM_TAXID: 29760; SOURCE 5 STRAIN: SAUVIGNON BLANC; SOURCE 6 OTHER_DETAILS: GRAPE JUICE KEYWDS UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR M.MARANGON,R.I.MENZ,E.J.WATERS,S.C.VAN SLUYTER REVDAT 2 03-JUL-13 4H8T 1 OBSLTE REVDAT 1 31-OCT-12 4H8T 0 JRNL AUTH M.MARANGON,R.I.MENZ,E.J.WATERS,S.C.VAN SLUYTER JRNL TITL STRUCTURE OF HAZE FORMING PROTEINS IN WHITE WINES: VITIS JRNL TITL 2 VINIFERA THAUMATIN-LIKE PROTEINS JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 2.00 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.00 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 12.35 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 73.6 REMARK 3 NUMBER OF REFLECTIONS : 21197 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.224 REMARK 3 R VALUE (WORKING SET) : 0.220 REMARK 3 FREE R VALUE : 0.286 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1132 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.00 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1528 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 75.90 REMARK 3 BIN R VALUE (WORKING SET) : 0.2250 REMARK 3 BIN FREE R VALUE SET COUNT : 81 REMARK 3 BIN FREE R VALUE : 0.3210 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2940 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 331 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.77 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.01000 REMARK 3 B22 (A**2) : 0.01000 REMARK 3 B33 (A**2) : 0.01000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.317 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.254 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.126 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 8.337 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.886 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.849 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3045 ; 0.018 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4159 ; 1.979 ; 1.952 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 392 ; 7.893 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 136 ;42.975 ;24.853 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 439 ;14.223 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;15.813 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 439 ; 0.129 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2402 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 1 A 198 REMARK 3 ORIGIN FOR THE GROUP (A): -19.7040 -26.5117 0.1710 REMARK 3 T TENSOR REMARK 3 T11: 0.0002 T22: 0.0029 REMARK 3 T33: 0.0069 T12: -0.0001 REMARK 3 T13: 0.0001 T23: -0.0026 REMARK 3 L TENSOR REMARK 3 L11: 0.1151 L22: 0.0672 REMARK 3 L33: 0.0474 L12: -0.0257 REMARK 3 L13: 0.0260 L23: -0.0092 REMARK 3 S TENSOR REMARK 3 S11: -0.0022 S12: 0.0051 S13: 0.0049 REMARK 3 S21: -0.0005 S22: -0.0061 S23: -0.0081 REMARK 3 S31: -0.0010 S32: 0.0010 S33: 0.0083 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 1 B 198 REMARK 3 ORIGIN FOR THE GROUP (A): 0.6278 -49.5030 24.5714 REMARK 3 T TENSOR REMARK 3 T11: 0.0031 T22: 0.0028 REMARK 3 T33: 0.0049 T12: -0.0020 REMARK 3 T13: -0.0003 T23: 0.0010 REMARK 3 L TENSOR REMARK 3 L11: 0.0509 L22: 0.0519 REMARK 3 L33: 0.0793 L12: -0.0253 REMARK 3 L13: 0.0383 L23: 0.0002 REMARK 3 S TENSOR REMARK 3 S11: 0.0040 S12: -0.0004 S13: -0.0071 REMARK 3 S21: -0.0067 S22: -0.0031 S23: 0.0001 REMARK 3 S31: -0.0018 S32: 0.0030 S33: -0.0010 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : NULL REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : NULL REMARK 3 ION PROBE RADIUS : NULL REMARK 3 SHRINKAGE RADIUS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT REMARK 4 REMARK 4 4H8T COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 27-SEP-12. REMARK 100 THE RCSB ID CODE IS RCSB075163. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 22-NOV-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 4.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : AUSTRALIAN SYNCHROTRON REMARK 200 BEAMLINE : MX1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.956639 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 30904 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.800 REMARK 200 RESOLUTION RANGE LOW (A) : 12.609 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 74.7 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.80 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.89 REMARK 200 COMPLETENESS FOR SHELL (%) : 77.1 REMARK 200 DATA REDUNDANCY IN SHELL : 2.40 REMARK 200 R MERGE FOR SHELL (I) : 0.19400 REMARK 200 R SYM FOR SHELL (I) : 0.19400 REMARK 200 FOR SHELL : 4.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: MOLREP REMARK 200 STARTING MODEL: PDB ENTRY 1Z3Q REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 53.46 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.64 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NA ACETATE PH 4.6, 2 M MG REMARK 280 ACETATE, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 293K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 61.10500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 26.36500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 61.10500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 26.36500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 CYS A 149 REMARK 465 THR A 150 REMARK 465 ASP A 151 REMARK 465 GLY A 152 REMARK 465 PRO A 153 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 PRO B 153 C - N - CD ANGL. DEV. = -14.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 89 141.99 -37.45 REMARK 500 ASP A 178 -146.75 -70.72 REMARK 500 LYS A 180 -40.13 -19.12 REMARK 500 THR A 181 49.31 -156.93 REMARK 500 ASN B 66 49.32 32.50 REMARK 500 PRO B 89 -74.92 -18.94 REMARK 500 ASN B 104 -44.73 -132.82 REMARK 500 CYS B 149 153.13 155.23 REMARK 500 THR B 150 -44.06 -149.28 REMARK 500 ASP B 151 -139.10 -62.38 REMARK 500 ASP B 178 32.06 -79.78 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 ASP A 178 ASP A 179 -148.39 REMARK 500 THR B 150 ASP B 151 125.39 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 ASP A 179 24.0 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 201 DBREF 4H8T A 1 198 UNP O04708 O04708_VITVI 25 222 DBREF 4H8T B 1 198 UNP O04708 O04708_VITVI 25 222 SEQRES 1 A 198 ALA THR PHE ASP ILE LEU ASN LYS CYS THR TYR THR VAL SEQRES 2 A 198 TRP ALA ALA ALA SER PRO GLY GLY GLY ARG ARG LEU ASP SEQRES 3 A 198 SER GLY GLN SER TRP THR ILE THR VAL ASN PRO GLY THR SEQRES 4 A 198 THR ASN ALA ARG ILE TRP GLY ARG THR SER CYS THR PHE SEQRES 5 A 198 ASP ALA ASN GLY ARG GLY LYS CYS GLU THR GLY ASP CYS SEQRES 6 A 198 ASN GLY LEU LEU GLU CYS GLN GLY TYR GLY SER PRO PRO SEQRES 7 A 198 ASN THR LEU ALA GLU PHE ALA LEU ASN GLN PRO ASN ASN SEQRES 8 A 198 LEU ASP TYR ILE ASP ILE SER LEU VAL ASP GLY PHE ASN SEQRES 9 A 198 ILE PRO MET ASP PHE SER GLY CYS ARG GLY ILE GLN CYS SEQRES 10 A 198 SER VAL ASP ILE ASN GLY GLN CYS PRO SER GLU LEU LYS SEQRES 11 A 198 ALA PRO GLY GLY CYS ASN ASN PRO CYS THR VAL PHE LYS SEQRES 12 A 198 THR ASN GLU TYR CYS CYS THR ASP GLY PRO GLY SER CYS SEQRES 13 A 198 GLY PRO THR THR TYR SER LYS PHE PHE LYS ASP ARG CYS SEQRES 14 A 198 PRO ASP ALA TYR SER TYR PRO GLN ASP ASP LYS THR SER SEQRES 15 A 198 LEU PHE THR CYS PRO SER GLY THR ASN TYR LYS VAL THR SEQRES 16 A 198 PHE CYS PRO SEQRES 1 B 198 ALA THR PHE ASP ILE LEU ASN LYS CYS THR TYR THR VAL SEQRES 2 B 198 TRP ALA ALA ALA SER PRO GLY GLY GLY ARG ARG LEU ASP SEQRES 3 B 198 SER GLY GLN SER TRP THR ILE THR VAL ASN PRO GLY THR SEQRES 4 B 198 THR ASN ALA ARG ILE TRP GLY ARG THR SER CYS THR PHE SEQRES 5 B 198 ASP ALA ASN GLY ARG GLY LYS CYS GLU THR GLY ASP CYS SEQRES 6 B 198 ASN GLY LEU LEU GLU CYS GLN GLY TYR GLY SER PRO PRO SEQRES 7 B 198 ASN THR LEU ALA GLU PHE ALA LEU ASN GLN PRO ASN ASN SEQRES 8 B 198 LEU ASP TYR ILE ASP ILE SER LEU VAL ASP GLY PHE ASN SEQRES 9 B 198 ILE PRO MET ASP PHE SER GLY CYS ARG GLY ILE GLN CYS SEQRES 10 B 198 SER VAL ASP ILE ASN GLY GLN CYS PRO SER GLU LEU LYS SEQRES 11 B 198 ALA PRO GLY GLY CYS ASN ASN PRO CYS THR VAL PHE LYS SEQRES 12 B 198 THR ASN GLU TYR CYS CYS THR ASP GLY PRO GLY SER CYS SEQRES 13 B 198 GLY PRO THR THR TYR SER LYS PHE PHE LYS ASP ARG CYS SEQRES 14 B 198 PRO ASP ALA TYR SER TYR PRO GLN ASP ASP LYS THR SER SEQRES 15 B 198 LEU PHE THR CYS PRO SER GLY THR ASN TYR LYS VAL THR SEQRES 16 B 198 PHE CYS PRO HET GOL B 201 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 GOL C3 H8 O3 FORMUL 4 HOH *331(H2 O) HELIX 1 1 ASP A 120 CYS A 125 1 6 HELIX 2 2 ASN A 137 PHE A 142 1 6 HELIX 3 3 THR A 159 CYS A 169 1 11 HELIX 4 4 ASP B 120 CYS B 125 1 6 HELIX 5 5 ASN B 137 PHE B 142 1 6 HELIX 6 6 THR B 159 CYS B 169 1 11 HELIX 7 7 ASP B 178 LEU B 183 1 6 SHEET 1 A 5 SER A 30 THR A 34 0 SHEET 2 A 5 THR A 2 ASN A 7 -1 N PHE A 3 O ILE A 33 SHEET 3 A 5 TYR A 192 PHE A 196 1 O TYR A 192 N THR A 2 SHEET 4 A 5 MET A 107 SER A 110 -1 N ASP A 108 O THR A 195 SHEET 5 A 5 GLY A 114 CYS A 117 -1 O CYS A 117 N MET A 107 SHEET 1 B 6 GLY A 21 LEU A 25 0 SHEET 2 B 6 VAL A 13 SER A 18 -1 N VAL A 13 O LEU A 25 SHEET 3 B 6 ALA A 42 ARG A 47 -1 O TRP A 45 N ALA A 16 SHEET 4 B 6 LEU A 81 GLN A 88 -1 O ALA A 82 N ILE A 44 SHEET 5 B 6 LEU A 92 SER A 98 -1 O ASP A 96 N GLU A 83 SHEET 6 B 6 PHE A 184 PRO A 187 -1 O CYS A 186 N ASP A 93 SHEET 1 C 2 CYS A 50 PHE A 52 0 SHEET 2 C 2 GLY A 58 CYS A 60 -1 O LYS A 59 N THR A 51 SHEET 1 D 2 LYS A 130 ALA A 131 0 SHEET 2 D 2 GLY A 134 CYS A 135 -1 O GLY A 134 N ALA A 131 SHEET 1 E 5 SER B 30 THR B 34 0 SHEET 2 E 5 THR B 2 ASN B 7 -1 N ILE B 5 O TRP B 31 SHEET 3 E 5 TYR B 192 PHE B 196 1 O VAL B 194 N LEU B 6 SHEET 4 E 5 MET B 107 SER B 110 -1 N ASP B 108 O THR B 195 SHEET 5 E 5 GLY B 114 CYS B 117 -1 O CYS B 117 N MET B 107 SHEET 1 F 4 GLY B 21 LEU B 25 0 SHEET 2 F 4 VAL B 13 SER B 18 -1 N VAL B 13 O LEU B 25 SHEET 3 F 4 ALA B 42 PHE B 52 -1 O ARG B 43 N SER B 18 SHEET 4 F 4 GLY B 58 THR B 62 -1 O LYS B 59 N THR B 51 SHEET 1 G 6 GLY B 21 LEU B 25 0 SHEET 2 G 6 VAL B 13 SER B 18 -1 N VAL B 13 O LEU B 25 SHEET 3 G 6 ALA B 42 PHE B 52 -1 O ARG B 43 N SER B 18 SHEET 4 G 6 LEU B 81 GLN B 88 -1 O ALA B 82 N ILE B 44 SHEET 5 G 6 LEU B 92 SER B 98 -1 O ASP B 96 N GLU B 83 SHEET 6 G 6 PHE B 184 PRO B 187 -1 O CYS B 186 N ASP B 93 SHEET 1 H 2 LYS B 130 ALA B 131 0 SHEET 2 H 2 GLY B 134 CYS B 135 -1 O GLY B 134 N ALA B 131 SSBOND 1 CYS A 9 CYS A 197 1555 1555 2.04 SSBOND 2 CYS A 50 CYS A 60 1555 1555 2.05 SSBOND 3 CYS A 65 CYS A 71 1555 1555 2.06 SSBOND 4 CYS A 112 CYS A 186 1555 1555 2.07 SSBOND 5 CYS A 117 CYS A 169 1555 1555 2.03 SSBOND 6 CYS A 125 CYS A 135 1555 1555 2.04 SSBOND 7 CYS A 139 CYS A 148 1555 1555 2.10 SSBOND 8 CYS B 9 CYS B 197 1555 1555 2.03 SSBOND 9 CYS B 50 CYS B 60 1555 1555 2.02 SSBOND 10 CYS B 65 CYS B 71 1555 1555 2.01 SSBOND 11 CYS B 112 CYS B 186 1555 1555 2.08 SSBOND 12 CYS B 117 CYS B 169 1555 1555 2.06 SSBOND 13 CYS B 125 CYS B 135 1555 1555 2.01 SSBOND 14 CYS B 139 CYS B 148 1555 1555 2.07 SSBOND 15 CYS B 149 CYS B 156 1555 1555 2.44 CISPEP 1 SER A 18 PRO A 19 0 -1.37 CISPEP 2 PRO A 77 PRO A 78 0 1.26 CISPEP 3 SER B 18 PRO B 19 0 -2.96 CISPEP 4 PRO B 77 PRO B 78 0 6.06 CISPEP 5 ASP B 151 GLY B 152 0 -12.29 SITE 1 AC1 4 ARG A 24 ASN B 145 SER B 155 HOH B 431 CRYST1 122.210 52.730 94.390 90.00 132.23 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.008183 0.000000 0.007427 0.00000 SCALE2 0.000000 0.018965 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014308 0.00000