data_4H9D # _entry.id 4H9D # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4H9D RCSB RCSB075183 WWPDB D_1000075183 # _pdbx_database_PDB_obs_spr.id SPRSDE _pdbx_database_PDB_obs_spr.date 2012-10-10 _pdbx_database_PDB_obs_spr.pdb_id 4H9D _pdbx_database_PDB_obs_spr.replace_pdb_id 2QGP _pdbx_database_PDB_obs_spr.details ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 2QGP '100% identity; to be obsolete' unspecified TargetTrack NESG-GmR87 . unspecified # _pdbx_database_status.entry_id 4H9D _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-09-24 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kuzin, A.' 1 'Chen, Y.' 2 'Seetharaman, J.' 3 'Fang, F.' 4 'Xiao, R.' 5 'Cunningham, K.' 6 'Ma, L.' 7 'Owens, L.' 8 'Chen, C.X.' 9 'Everett, J.K.' 10 'Acton, T.B.' 11 'Montelione, G.T.' 12 'Hunt, J.F.' 13 'Tong, L.' 14 'Northeast Structural Genomics Consortium (NESG)' 15 # _citation.id primary _citation.title 'Northeast Structural Genomics Consortium Target GmR87' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Kuzin, A.' 1 primary 'Chen, Y.' 2 primary 'Seetharaman, J.' 3 primary 'Fang, F.' 4 primary 'Xiao, R.' 5 primary 'Cunningham, K.' 6 primary 'Ma, L.' 7 primary 'Owens, L.' 8 primary 'Chen, C.X.' 9 primary 'Everett, J.K.' 10 primary 'Acton, T.B.' 11 primary 'Montelione, G.T.' 12 primary 'Hunt, J.F.' 13 primary 'Tong, L.' 14 # _cell.entry_id 4H9D _cell.length_a 40.674 _cell.length_b 83.385 _cell.length_c 225.116 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 24 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4H9D _symmetry.space_group_name_H-M 'I 2 2 2' _symmetry.Int_Tables_number 23 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer nat 'HNH endonuclease' 13382.799 3 ? ? ? ? 2 non-polymer syn 'ZINC ION' 65.409 3 ? ? ? ? 3 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 4 water nat water 18.015 13 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;(MSE)NYFIVEVSEQEVKREKEKARELRRSQWWKNRIARGICHYCGEIFPPEELT(MSE)DHLVPVVRGGKSTRGNVVPA CKECNNRKKYLLPVEWEEYLDSLESEPSDGEGLEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MNYFIVEVSEQEVKREKEKARELRRSQWWKNRIARGICHYCGEIFPPEELTMDHLVPVVRGGKSTRGNVVPACKECNNRK KYLLPVEWEEYLDSLESEPSDGEGLEHHHHHH ; _entity_poly.pdbx_strand_id A,B,C _entity_poly.pdbx_target_identifier NESG-GmR87 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MSE n 1 2 ASN n 1 3 TYR n 1 4 PHE n 1 5 ILE n 1 6 VAL n 1 7 GLU n 1 8 VAL n 1 9 SER n 1 10 GLU n 1 11 GLN n 1 12 GLU n 1 13 VAL n 1 14 LYS n 1 15 ARG n 1 16 GLU n 1 17 LYS n 1 18 GLU n 1 19 LYS n 1 20 ALA n 1 21 ARG n 1 22 GLU n 1 23 LEU n 1 24 ARG n 1 25 ARG n 1 26 SER n 1 27 GLN n 1 28 TRP n 1 29 TRP n 1 30 LYS n 1 31 ASN n 1 32 ARG n 1 33 ILE n 1 34 ALA n 1 35 ARG n 1 36 GLY n 1 37 ILE n 1 38 CYS n 1 39 HIS n 1 40 TYR n 1 41 CYS n 1 42 GLY n 1 43 GLU n 1 44 ILE n 1 45 PHE n 1 46 PRO n 1 47 PRO n 1 48 GLU n 1 49 GLU n 1 50 LEU n 1 51 THR n 1 52 MSE n 1 53 ASP n 1 54 HIS n 1 55 LEU n 1 56 VAL n 1 57 PRO n 1 58 VAL n 1 59 VAL n 1 60 ARG n 1 61 GLY n 1 62 GLY n 1 63 LYS n 1 64 SER n 1 65 THR n 1 66 ARG n 1 67 GLY n 1 68 ASN n 1 69 VAL n 1 70 VAL n 1 71 PRO n 1 72 ALA n 1 73 CYS n 1 74 LYS n 1 75 GLU n 1 76 CYS n 1 77 ASN n 1 78 ASN n 1 79 ARG n 1 80 LYS n 1 81 LYS n 1 82 TYR n 1 83 LEU n 1 84 LEU n 1 85 PRO n 1 86 VAL n 1 87 GLU n 1 88 TRP n 1 89 GLU n 1 90 GLU n 1 91 TYR n 1 92 LEU n 1 93 ASP n 1 94 SER n 1 95 LEU n 1 96 GLU n 1 97 SER n 1 98 GLU n 1 99 PRO n 1 100 SER n 1 101 ASP n 1 102 GLY n 1 103 GLU n 1 104 GLY n 1 105 LEU n 1 106 GLU n 1 107 HIS n 1 108 HIS n 1 109 HIS n 1 110 HIS n 1 111 HIS n 1 112 HIS n # _entity_src_nat.entity_id 1 _entity_src_nat.pdbx_src_id 1 _entity_src_nat.pdbx_alt_source_flag sample _entity_src_nat.pdbx_beg_seq_num ? _entity_src_nat.pdbx_end_seq_num ? _entity_src_nat.common_name ? _entity_src_nat.pdbx_organism_scientific 'Geobacter metallireducens' _entity_src_nat.pdbx_ncbi_taxonomy_id 269799 _entity_src_nat.genus ? _entity_src_nat.species ? _entity_src_nat.strain 'GS-15 / ATCC 53774 / DSM 7210' _entity_src_nat.tissue ? _entity_src_nat.tissue_fraction ? _entity_src_nat.pdbx_secretion ? _entity_src_nat.pdbx_fragment ? _entity_src_nat.pdbx_variant ? _entity_src_nat.pdbx_cell_line ? _entity_src_nat.pdbx_atcc ? _entity_src_nat.pdbx_cellular_location ? _entity_src_nat.pdbx_organ ? _entity_src_nat.pdbx_organelle ? _entity_src_nat.pdbx_cell ? _entity_src_nat.pdbx_plasmid_name ? _entity_src_nat.pdbx_plasmid_details ? _entity_src_nat.details ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q39X46_GEOMG _struct_ref.pdbx_db_accession Q39X46 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MNYFIVEVSEQEVKREKEKARELRRSQWWKNRIARGICHYCGEIFPPEELTMDHLVPVVRGGKSTRGNVVPACKECNNRK KYLLPVEWEEYLDSLESEPSDGEG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4H9D A 1 ? 104 ? Q39X46 1 ? 104 ? 1 104 2 1 4H9D B 1 ? 104 ? Q39X46 1 ? 104 ? 1 104 3 1 4H9D C 1 ? 104 ? Q39X46 1 ? 104 ? 1 104 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4H9D LEU A 105 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 105 1 1 4H9D GLU A 106 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 106 2 1 4H9D HIS A 107 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 107 3 1 4H9D HIS A 108 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 108 4 1 4H9D HIS A 109 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 109 5 1 4H9D HIS A 110 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 110 6 1 4H9D HIS A 111 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 111 7 1 4H9D HIS A 112 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 112 8 2 4H9D LEU B 105 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 105 9 2 4H9D GLU B 106 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 106 10 2 4H9D HIS B 107 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 107 11 2 4H9D HIS B 108 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 108 12 2 4H9D HIS B 109 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 109 13 2 4H9D HIS B 110 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 110 14 2 4H9D HIS B 111 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 111 15 2 4H9D HIS B 112 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 112 16 3 4H9D LEU C 105 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 105 17 3 4H9D GLU C 106 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 106 18 3 4H9D HIS C 107 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 107 19 3 4H9D HIS C 108 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 108 20 3 4H9D HIS C 109 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 109 21 3 4H9D HIS C 110 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 110 22 3 4H9D HIS C 111 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 111 23 3 4H9D HIS C 112 ? UNP Q39X46 ? ? 'EXPRESSION TAG' 112 24 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 ZN non-polymer . 'ZINC ION' ? 'Zn 2' 65.409 # _exptl.entry_id 4H9D _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.38 _exptl_crystal.density_percent_sol 48.26 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 8.5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details ;Protein solution: 100mM NaCl, 5mM DTT, 0.02% NaN3, 10mM Tris-HCl (pH 7.5), Reservoir solution: MG-sulfate 0.2M, PEG 8000 20% (v/v), Tris-HCl 0.1M, VAPOR DIFFUSION, HANGING DROP, temperature 277K ; # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 4' _diffrn_detector.pdbx_collection_date 2007-04-27 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSLS BEAMLINE X4A' _diffrn_source.pdbx_synchrotron_site NSLS _diffrn_source.pdbx_synchrotron_beamline X4A _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4H9D _reflns.observed_criterion_sigma_I -3.0 _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 40 _reflns.d_resolution_high 2.6 _reflns.number_obs 22466 _reflns.number_all ? _reflns.percent_possible_obs 98.7 _reflns.pdbx_Rmerge_I_obs 0.082 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 29.0 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 10.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4H9D _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 12105 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.34 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 39.097 _refine.ls_d_res_high 2.599 _refine.ls_percent_reflns_obs 98.28 _refine.ls_R_factor_obs 0.2342 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2334 _refine.ls_R_factor_R_free 0.2510 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.79 _refine.ls_number_reflns_R_free 580 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.50 _refine.occupancy_max 1.00 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean ? _refine.aniso_B[1][1] -23.6698 _refine.aniso_B[2][2] 44.1332 _refine.aniso_B[3][3] -20.4634 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0000 _refine.aniso_B[2][3] -0.0000 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol 0.400 _refine.solvent_model_param_bsol 80.108 _refine.pdbx_solvent_vdw_probe_radii 1.00 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.73 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.37 _refine.pdbx_overall_phase_error 29.34 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2228 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 4 _refine_hist.number_atoms_solvent 13 _refine_hist.number_atoms_total 2245 _refine_hist.d_res_high 2.599 _refine_hist.d_res_low 39.097 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.007 ? ? 2281 'X-RAY DIFFRACTION' ? f_angle_d 1.297 ? ? 3073 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 17.332 ? ? 900 'X-RAY DIFFRACTION' ? f_chiral_restr 0.094 ? ? 314 'X-RAY DIFFRACTION' ? f_plane_restr 0.008 ? ? 400 'X-RAY DIFFRACTION' ? # loop_ _refine_ls_shell.pdbx_refine_id _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.number_reflns_obs 'X-RAY DIFFRACTION' . 2.5989 2.8604 2756 0.3316 96.00 0.3839 . . 132 . . . . 'X-RAY DIFFRACTION' . 2.8604 3.2741 2831 0.2728 99.00 0.2879 . . 148 . . . . 'X-RAY DIFFRACTION' . 3.2741 4.1243 2898 0.2404 99.00 0.2351 . . 143 . . . . 'X-RAY DIFFRACTION' . 4.1243 39.1010 3040 0.1977 100.00 0.2232 . . 157 . . . . # _struct.entry_id 4H9D _struct.title ;Crystal Structure of Mn-dependent Gme HNH nicking endonuclease from Geobacter metallireducens GS-15, Northeast Structural Genomics Consortium (NESG) Target GmR87 ; _struct.pdbx_descriptor 'HNH endonuclease' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4H9D _struct_keywords.text ;Structural Genomics, PSI-Biology, Protein Structure Initiative, Northeast Structural Genomics Consortium (NESG), nicking endonuclease, HYDROLASE ; _struct_keywords.pdbx_keywords HYDROLASE # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 1 ? D N N 2 ? E N N 2 ? F N N 3 ? G N N 2 ? H N N 4 ? I N N 4 ? J N N 4 ? # _struct_biol.id 1 _struct_biol.details 'dimer,23.9 kD,91%' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 9 ? ARG A 25 ? SER A 9 ARG A 25 1 ? 17 HELX_P HELX_P2 2 SER A 26 ? ARG A 35 ? SER A 26 ARG A 35 1 ? 10 HELX_P HELX_P3 3 PRO A 46 ? GLU A 48 ? PRO A 46 GLU A 48 5 ? 3 HELX_P HELX_P4 4 PRO A 57 ? GLY A 61 ? PRO A 57 GLY A 61 5 ? 5 HELX_P HELX_P5 5 LYS A 74 ? LEU A 83 ? LYS A 74 LEU A 83 1 ? 10 HELX_P HELX_P6 6 LEU A 84 ? ASP A 93 ? LEU A 84 ASP A 93 1 ? 10 HELX_P HELX_P7 7 SER B 9 ? LYS B 14 ? SER B 9 LYS B 14 1 ? 6 HELX_P HELX_P8 8 LYS B 14 ? ARG B 24 ? LYS B 14 ARG B 24 1 ? 11 HELX_P HELX_P9 9 SER B 26 ? GLY B 36 ? SER B 26 GLY B 36 1 ? 11 HELX_P HELX_P10 10 PRO B 46 ? GLU B 48 ? PRO B 46 GLU B 48 5 ? 3 HELX_P HELX_P11 11 PRO B 57 ? GLY B 61 ? PRO B 57 GLY B 61 5 ? 5 HELX_P HELX_P12 12 LYS B 74 ? LEU B 83 ? LYS B 74 LEU B 83 1 ? 10 HELX_P HELX_P13 13 LEU B 84 ? ASP B 93 ? LEU B 84 ASP B 93 1 ? 10 HELX_P HELX_P14 14 GLU C 16 ? ARG C 24 ? GLU C 16 ARG C 24 1 ? 9 HELX_P HELX_P15 15 SER C 26 ? GLY C 36 ? SER C 26 GLY C 36 1 ? 11 HELX_P HELX_P16 16 THR C 65 ? GLY C 67 ? THR C 65 GLY C 67 5 ? 3 HELX_P HELX_P17 17 LYS C 74 ? LYS C 81 ? LYS C 74 LYS C 81 1 ? 8 HELX_P HELX_P18 18 LEU C 84 ? SER C 94 ? LEU C 84 SER C 94 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A MSE 1 C ? ? ? 1_555 A ASN 2 N ? ? A MSE 1 A ASN 2 1_555 ? ? ? ? ? ? ? 1.325 ? covale2 covale ? ? A THR 51 C ? ? ? 1_555 A MSE 52 N ? ? A THR 51 A MSE 52 1_555 ? ? ? ? ? ? ? 1.319 ? covale3 covale ? ? A MSE 52 C ? ? ? 1_555 A ASP 53 N ? ? A MSE 52 A ASP 53 1_555 ? ? ? ? ? ? ? 1.325 ? covale4 covale ? ? B THR 51 C ? ? ? 1_555 B MSE 52 N ? ? B THR 51 B MSE 52 1_555 ? ? ? ? ? ? ? 1.329 ? covale5 covale ? ? B MSE 52 C ? ? ? 1_555 B ASP 53 N ? ? B MSE 52 B ASP 53 1_555 ? ? ? ? ? ? ? 1.318 ? covale6 covale ? ? C THR 51 C ? ? ? 1_555 C MSE 52 N ? ? C THR 51 C MSE 52 1_555 ? ? ? ? ? ? ? 1.326 ? covale7 covale ? ? C MSE 52 C ? ? ? 1_555 C ASP 53 N ? ? C MSE 52 C ASP 53 1_555 ? ? ? ? ? ? ? 1.326 ? metalc1 metalc ? ? A CYS 41 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 41 A ZN 201 1_555 ? ? ? ? ? ? ? 2.313 ? metalc2 metalc ? ? A CYS 38 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 38 A ZN 201 1_555 ? ? ? ? ? ? ? 2.314 ? metalc3 metalc ? ? B CYS 38 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 38 B ZN 201 1_555 ? ? ? ? ? ? ? 2.330 ? metalc4 metalc ? ? B CYS 73 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 73 B ZN 201 1_555 ? ? ? ? ? ? ? 2.334 ? metalc5 metalc ? ? C CYS 41 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 41 C ZN 201 1_555 ? ? ? ? ? ? ? 2.399 ? metalc6 metalc ? ? B CYS 41 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 41 B ZN 201 1_555 ? ? ? ? ? ? ? 2.462 ? metalc7 metalc ? ? B CYS 76 SG ? ? ? 1_555 E ZN . ZN ? ? B CYS 76 B ZN 201 1_555 ? ? ? ? ? ? ? 2.484 ? metalc8 metalc ? ? C CYS 38 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 38 C ZN 201 1_555 ? ? ? ? ? ? ? 2.488 ? metalc9 metalc ? ? A CYS 73 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 73 A ZN 201 1_555 ? ? ? ? ? ? ? 2.536 ? metalc10 metalc ? ? C CYS 76 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 76 C ZN 201 1_555 ? ? ? ? ? ? ? 2.539 ? metalc11 metalc ? ? A CYS 76 SG ? ? ? 1_555 D ZN . ZN ? ? A CYS 76 A ZN 201 1_555 ? ? ? ? ? ? ? 2.541 ? metalc12 metalc ? ? C CYS 73 SG ? ? ? 1_555 G ZN . ZN ? ? C CYS 73 C ZN 201 1_555 ? ? ? ? ? ? ? 2.548 ? metalc13 metalc ? ? B ALA 34 O ? ? ? 1_555 F MG . MG ? ? B ALA 34 B MG 202 1_555 ? ? ? ? ? ? ? 2.605 ? metalc14 metalc ? ? A LYS 81 O ? ? ? 1_555 F MG . MG ? ? A LYS 81 B MG 202 1_555 ? ? ? ? ? ? ? 2.885 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference covale ? ? metalc ? ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 2 ? C ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? anti-parallel C 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 50 ? HIS A 54 ? LEU A 50 HIS A 54 A 2 VAL A 69 ? CYS A 73 ? VAL A 69 CYS A 73 B 1 LEU B 50 ? HIS B 54 ? LEU B 50 HIS B 54 B 2 VAL B 69 ? CYS B 73 ? VAL B 69 CYS B 73 C 1 LEU C 50 ? HIS C 54 ? LEU C 50 HIS C 54 C 2 VAL C 69 ? CYS C 73 ? VAL C 69 CYS C 73 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 53 ? N ASP A 53 O VAL A 70 ? O VAL A 70 B 1 2 N THR B 51 ? N THR B 51 O ALA B 72 ? O ALA B 72 C 1 2 N ASP C 53 ? N ASP C 53 O VAL C 70 ? O VAL C 70 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN A 201' AC2 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN B 201' AC3 Software ? ? ? ? 3 'BINDING SITE FOR RESIDUE MG B 202' AC4 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE ZN C 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 4 CYS A 38 ? CYS A 38 . ? 1_555 ? 2 AC1 4 CYS A 41 ? CYS A 41 . ? 1_555 ? 3 AC1 4 CYS A 73 ? CYS A 73 . ? 1_555 ? 4 AC1 4 CYS A 76 ? CYS A 76 . ? 1_555 ? 5 AC2 4 CYS B 38 ? CYS B 38 . ? 1_555 ? 6 AC2 4 CYS B 41 ? CYS B 41 . ? 1_555 ? 7 AC2 4 CYS B 73 ? CYS B 73 . ? 1_555 ? 8 AC2 4 CYS B 76 ? CYS B 76 . ? 1_555 ? 9 AC3 3 LYS A 81 ? LYS A 81 . ? 1_555 ? 10 AC3 3 ALA B 34 ? ALA B 34 . ? 1_555 ? 11 AC3 3 ARG B 35 ? ARG B 35 . ? 1_555 ? 12 AC4 4 CYS C 38 ? CYS C 38 . ? 1_555 ? 13 AC4 4 CYS C 41 ? CYS C 41 . ? 1_555 ? 14 AC4 4 CYS C 73 ? CYS C 73 . ? 1_555 ? 15 AC4 4 CYS C 76 ? CYS C 76 . ? 1_555 ? # _atom_sites.entry_id 4H9D _atom_sites.fract_transf_matrix[1][1] 0.024586 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.011993 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004442 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C MG N O S SE ZN # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MSE 1 1 1 MSE MSE A . n A 1 2 ASN 2 2 2 ASN ASN A . n A 1 3 TYR 3 3 3 TYR TYR A . n A 1 4 PHE 4 4 4 PHE PHE A . n A 1 5 ILE 5 5 5 ILE ILE A . n A 1 6 VAL 6 6 6 VAL VAL A . n A 1 7 GLU 7 7 7 GLU GLU A . n A 1 8 VAL 8 8 8 VAL VAL A . n A 1 9 SER 9 9 9 SER SER A . n A 1 10 GLU 10 10 10 GLU GLU A . n A 1 11 GLN 11 11 11 GLN GLN A . n A 1 12 GLU 12 12 12 GLU GLU A . n A 1 13 VAL 13 13 13 VAL VAL A . n A 1 14 LYS 14 14 14 LYS LYS A . n A 1 15 ARG 15 15 15 ARG ARG A . n A 1 16 GLU 16 16 16 GLU GLU A . n A 1 17 LYS 17 17 17 LYS LYS A . n A 1 18 GLU 18 18 18 GLU GLU A . n A 1 19 LYS 19 19 19 LYS LYS A . n A 1 20 ALA 20 20 20 ALA ALA A . n A 1 21 ARG 21 21 21 ARG ARG A . n A 1 22 GLU 22 22 22 GLU GLU A . n A 1 23 LEU 23 23 23 LEU LEU A . n A 1 24 ARG 24 24 24 ARG ARG A . n A 1 25 ARG 25 25 25 ARG ARG A . n A 1 26 SER 26 26 26 SER SER A . n A 1 27 GLN 27 27 27 GLN GLN A . n A 1 28 TRP 28 28 28 TRP TRP A . n A 1 29 TRP 29 29 29 TRP TRP A . n A 1 30 LYS 30 30 30 LYS LYS A . n A 1 31 ASN 31 31 31 ASN ASN A . n A 1 32 ARG 32 32 32 ARG ARG A . n A 1 33 ILE 33 33 33 ILE ILE A . n A 1 34 ALA 34 34 34 ALA ALA A . n A 1 35 ARG 35 35 35 ARG ARG A . n A 1 36 GLY 36 36 36 GLY GLY A . n A 1 37 ILE 37 37 37 ILE ILE A . n A 1 38 CYS 38 38 38 CYS CYS A . n A 1 39 HIS 39 39 39 HIS HIS A . n A 1 40 TYR 40 40 40 TYR TYR A . n A 1 41 CYS 41 41 41 CYS CYS A . n A 1 42 GLY 42 42 42 GLY GLY A . n A 1 43 GLU 43 43 43 GLU GLU A . n A 1 44 ILE 44 44 44 ILE ILE A . n A 1 45 PHE 45 45 45 PHE PHE A . n A 1 46 PRO 46 46 46 PRO PRO A . n A 1 47 PRO 47 47 47 PRO PRO A . n A 1 48 GLU 48 48 48 GLU GLU A . n A 1 49 GLU 49 49 49 GLU GLU A . n A 1 50 LEU 50 50 50 LEU LEU A . n A 1 51 THR 51 51 51 THR THR A . n A 1 52 MSE 52 52 52 MSE MSE A . n A 1 53 ASP 53 53 53 ASP ASP A . n A 1 54 HIS 54 54 54 HIS HIS A . n A 1 55 LEU 55 55 55 LEU LEU A . n A 1 56 VAL 56 56 56 VAL VAL A . n A 1 57 PRO 57 57 57 PRO PRO A . n A 1 58 VAL 58 58 58 VAL VAL A . n A 1 59 VAL 59 59 59 VAL VAL A . n A 1 60 ARG 60 60 60 ARG ARG A . n A 1 61 GLY 61 61 61 GLY GLY A . n A 1 62 GLY 62 62 62 GLY GLY A . n A 1 63 LYS 63 63 63 LYS LYS A . n A 1 64 SER 64 64 64 SER SER A . n A 1 65 THR 65 65 65 THR THR A . n A 1 66 ARG 66 66 66 ARG ARG A . n A 1 67 GLY 67 67 67 GLY GLY A . n A 1 68 ASN 68 68 68 ASN ASN A . n A 1 69 VAL 69 69 69 VAL VAL A . n A 1 70 VAL 70 70 70 VAL VAL A . n A 1 71 PRO 71 71 71 PRO PRO A . n A 1 72 ALA 72 72 72 ALA ALA A . n A 1 73 CYS 73 73 73 CYS CYS A . n A 1 74 LYS 74 74 74 LYS LYS A . n A 1 75 GLU 75 75 75 GLU GLU A . n A 1 76 CYS 76 76 76 CYS CYS A . n A 1 77 ASN 77 77 77 ASN ASN A . n A 1 78 ASN 78 78 78 ASN ASN A . n A 1 79 ARG 79 79 79 ARG ARG A . n A 1 80 LYS 80 80 80 LYS LYS A . n A 1 81 LYS 81 81 81 LYS LYS A . n A 1 82 TYR 82 82 82 TYR TYR A . n A 1 83 LEU 83 83 83 LEU LEU A . n A 1 84 LEU 84 84 84 LEU LEU A . n A 1 85 PRO 85 85 85 PRO PRO A . n A 1 86 VAL 86 86 86 VAL VAL A . n A 1 87 GLU 87 87 87 GLU GLU A . n A 1 88 TRP 88 88 88 TRP TRP A . n A 1 89 GLU 89 89 89 GLU GLU A . n A 1 90 GLU 90 90 90 GLU GLU A . n A 1 91 TYR 91 91 91 TYR TYR A . n A 1 92 LEU 92 92 92 LEU LEU A . n A 1 93 ASP 93 93 93 ASP ASP A . n A 1 94 SER 94 94 94 SER SER A . n A 1 95 LEU 95 95 95 LEU LEU A . n A 1 96 GLU 96 96 96 GLU GLU A . n A 1 97 SER 97 97 97 SER SER A . n A 1 98 GLU 98 98 ? ? ? A . n A 1 99 PRO 99 99 ? ? ? A . n A 1 100 SER 100 100 ? ? ? A . n A 1 101 ASP 101 101 ? ? ? A . n A 1 102 GLY 102 102 ? ? ? A . n A 1 103 GLU 103 103 ? ? ? A . n A 1 104 GLY 104 104 ? ? ? A . n A 1 105 LEU 105 105 ? ? ? A . n A 1 106 GLU 106 106 ? ? ? A . n A 1 107 HIS 107 107 ? ? ? A . n A 1 108 HIS 108 108 ? ? ? A . n A 1 109 HIS 109 109 ? ? ? A . n A 1 110 HIS 110 110 ? ? ? A . n A 1 111 HIS 111 111 ? ? ? A . n A 1 112 HIS 112 112 ? ? ? A . n B 1 1 MSE 1 1 ? ? ? B . n B 1 2 ASN 2 2 ? ? ? B . n B 1 3 TYR 3 3 ? ? ? B . n B 1 4 PHE 4 4 ? ? ? B . n B 1 5 ILE 5 5 ? ? ? B . n B 1 6 VAL 6 6 6 VAL VAL B . n B 1 7 GLU 7 7 7 GLU GLU B . n B 1 8 VAL 8 8 8 VAL VAL B . n B 1 9 SER 9 9 9 SER SER B . n B 1 10 GLU 10 10 10 GLU GLU B . n B 1 11 GLN 11 11 11 GLN GLN B . n B 1 12 GLU 12 12 12 GLU GLU B . n B 1 13 VAL 13 13 13 VAL VAL B . n B 1 14 LYS 14 14 14 LYS LYS B . n B 1 15 ARG 15 15 15 ARG ARG B . n B 1 16 GLU 16 16 16 GLU GLU B . n B 1 17 LYS 17 17 17 LYS LYS B . n B 1 18 GLU 18 18 18 GLU GLU B . n B 1 19 LYS 19 19 19 LYS LYS B . n B 1 20 ALA 20 20 20 ALA ALA B . n B 1 21 ARG 21 21 21 ARG ARG B . n B 1 22 GLU 22 22 22 GLU GLU B . n B 1 23 LEU 23 23 23 LEU LEU B . n B 1 24 ARG 24 24 24 ARG ARG B . n B 1 25 ARG 25 25 25 ARG ARG B . n B 1 26 SER 26 26 26 SER SER B . n B 1 27 GLN 27 27 27 GLN GLN B . n B 1 28 TRP 28 28 28 TRP TRP B . n B 1 29 TRP 29 29 29 TRP TRP B . n B 1 30 LYS 30 30 30 LYS LYS B . n B 1 31 ASN 31 31 31 ASN ASN B . n B 1 32 ARG 32 32 32 ARG ARG B . n B 1 33 ILE 33 33 33 ILE ILE B . n B 1 34 ALA 34 34 34 ALA ALA B . n B 1 35 ARG 35 35 35 ARG ARG B . n B 1 36 GLY 36 36 36 GLY GLY B . n B 1 37 ILE 37 37 37 ILE ILE B . n B 1 38 CYS 38 38 38 CYS CYS B . n B 1 39 HIS 39 39 39 HIS HIS B . n B 1 40 TYR 40 40 40 TYR TYR B . n B 1 41 CYS 41 41 41 CYS CYS B . n B 1 42 GLY 42 42 42 GLY GLY B . n B 1 43 GLU 43 43 43 GLU GLU B . n B 1 44 ILE 44 44 44 ILE ILE B . n B 1 45 PHE 45 45 45 PHE PHE B . n B 1 46 PRO 46 46 46 PRO PRO B . n B 1 47 PRO 47 47 47 PRO PRO B . n B 1 48 GLU 48 48 48 GLU GLU B . n B 1 49 GLU 49 49 49 GLU GLU B . n B 1 50 LEU 50 50 50 LEU LEU B . n B 1 51 THR 51 51 51 THR THR B . n B 1 52 MSE 52 52 52 MSE MSE B . n B 1 53 ASP 53 53 53 ASP ASP B . n B 1 54 HIS 54 54 54 HIS HIS B . n B 1 55 LEU 55 55 55 LEU LEU B . n B 1 56 VAL 56 56 56 VAL VAL B . n B 1 57 PRO 57 57 57 PRO PRO B . n B 1 58 VAL 58 58 58 VAL VAL B . n B 1 59 VAL 59 59 59 VAL VAL B . n B 1 60 ARG 60 60 60 ARG ARG B . n B 1 61 GLY 61 61 61 GLY GLY B . n B 1 62 GLY 62 62 62 GLY GLY B . n B 1 63 LYS 63 63 63 LYS LYS B . n B 1 64 SER 64 64 64 SER SER B . n B 1 65 THR 65 65 65 THR THR B . n B 1 66 ARG 66 66 66 ARG ARG B . n B 1 67 GLY 67 67 67 GLY GLY B . n B 1 68 ASN 68 68 68 ASN ASN B . n B 1 69 VAL 69 69 69 VAL VAL B . n B 1 70 VAL 70 70 70 VAL VAL B . n B 1 71 PRO 71 71 71 PRO PRO B . n B 1 72 ALA 72 72 72 ALA ALA B . n B 1 73 CYS 73 73 73 CYS CYS B . n B 1 74 LYS 74 74 74 LYS LYS B . n B 1 75 GLU 75 75 75 GLU GLU B . n B 1 76 CYS 76 76 76 CYS CYS B . n B 1 77 ASN 77 77 77 ASN ASN B . n B 1 78 ASN 78 78 78 ASN ASN B . n B 1 79 ARG 79 79 79 ARG ARG B . n B 1 80 LYS 80 80 80 LYS LYS B . n B 1 81 LYS 81 81 81 LYS LYS B . n B 1 82 TYR 82 82 82 TYR TYR B . n B 1 83 LEU 83 83 83 LEU LEU B . n B 1 84 LEU 84 84 84 LEU LEU B . n B 1 85 PRO 85 85 85 PRO PRO B . n B 1 86 VAL 86 86 86 VAL VAL B . n B 1 87 GLU 87 87 87 GLU GLU B . n B 1 88 TRP 88 88 88 TRP TRP B . n B 1 89 GLU 89 89 89 GLU GLU B . n B 1 90 GLU 90 90 90 GLU GLU B . n B 1 91 TYR 91 91 91 TYR TYR B . n B 1 92 LEU 92 92 92 LEU LEU B . n B 1 93 ASP 93 93 93 ASP ASP B . n B 1 94 SER 94 94 94 SER SER B . n B 1 95 LEU 95 95 95 LEU LEU B . n B 1 96 GLU 96 96 ? ? ? B . n B 1 97 SER 97 97 ? ? ? B . n B 1 98 GLU 98 98 ? ? ? B . n B 1 99 PRO 99 99 ? ? ? B . n B 1 100 SER 100 100 ? ? ? B . n B 1 101 ASP 101 101 ? ? ? B . n B 1 102 GLY 102 102 ? ? ? B . n B 1 103 GLU 103 103 ? ? ? B . n B 1 104 GLY 104 104 ? ? ? B . n B 1 105 LEU 105 105 ? ? ? B . n B 1 106 GLU 106 106 ? ? ? B . n B 1 107 HIS 107 107 ? ? ? B . n B 1 108 HIS 108 108 ? ? ? B . n B 1 109 HIS 109 109 ? ? ? B . n B 1 110 HIS 110 110 ? ? ? B . n B 1 111 HIS 111 111 ? ? ? B . n B 1 112 HIS 112 112 ? ? ? B . n C 1 1 MSE 1 1 ? ? ? C . n C 1 2 ASN 2 2 ? ? ? C . n C 1 3 TYR 3 3 ? ? ? C . n C 1 4 PHE 4 4 ? ? ? C . n C 1 5 ILE 5 5 ? ? ? C . n C 1 6 VAL 6 6 ? ? ? C . n C 1 7 GLU 7 7 ? ? ? C . n C 1 8 VAL 8 8 ? ? ? C . n C 1 9 SER 9 9 ? ? ? C . n C 1 10 GLU 10 10 ? ? ? C . n C 1 11 GLN 11 11 ? ? ? C . n C 1 12 GLU 12 12 ? ? ? C . n C 1 13 VAL 13 13 ? ? ? C . n C 1 14 LYS 14 14 ? ? ? C . n C 1 15 ARG 15 15 15 ARG ARG C . n C 1 16 GLU 16 16 16 GLU GLU C . n C 1 17 LYS 17 17 17 LYS LYS C . n C 1 18 GLU 18 18 18 GLU GLU C . n C 1 19 LYS 19 19 19 LYS LYS C . n C 1 20 ALA 20 20 20 ALA ALA C . n C 1 21 ARG 21 21 21 ARG ARG C . n C 1 22 GLU 22 22 22 GLU GLU C . n C 1 23 LEU 23 23 23 LEU LEU C . n C 1 24 ARG 24 24 24 ARG ARG C . n C 1 25 ARG 25 25 25 ARG ARG C . n C 1 26 SER 26 26 26 SER SER C . n C 1 27 GLN 27 27 27 GLN GLN C . n C 1 28 TRP 28 28 28 TRP TRP C . n C 1 29 TRP 29 29 29 TRP TRP C . n C 1 30 LYS 30 30 30 LYS LYS C . n C 1 31 ASN 31 31 31 ASN ASN C . n C 1 32 ARG 32 32 32 ARG ARG C . n C 1 33 ILE 33 33 33 ILE ILE C . n C 1 34 ALA 34 34 34 ALA ALA C . n C 1 35 ARG 35 35 35 ARG ARG C . n C 1 36 GLY 36 36 36 GLY GLY C . n C 1 37 ILE 37 37 37 ILE ILE C . n C 1 38 CYS 38 38 38 CYS CYS C . n C 1 39 HIS 39 39 39 HIS HIS C . n C 1 40 TYR 40 40 40 TYR TYR C . n C 1 41 CYS 41 41 41 CYS CYS C . n C 1 42 GLY 42 42 42 GLY GLY C . n C 1 43 GLU 43 43 43 GLU GLU C . n C 1 44 ILE 44 44 44 ILE ILE C . n C 1 45 PHE 45 45 45 PHE PHE C . n C 1 46 PRO 46 46 46 PRO PRO C . n C 1 47 PRO 47 47 47 PRO PRO C . n C 1 48 GLU 48 48 48 GLU GLU C . n C 1 49 GLU 49 49 49 GLU GLU C . n C 1 50 LEU 50 50 50 LEU LEU C . n C 1 51 THR 51 51 51 THR THR C . n C 1 52 MSE 52 52 52 MSE MSE C . n C 1 53 ASP 53 53 53 ASP ASP C . n C 1 54 HIS 54 54 54 HIS HIS C . n C 1 55 LEU 55 55 55 LEU LEU C . n C 1 56 VAL 56 56 56 VAL VAL C . n C 1 57 PRO 57 57 57 PRO PRO C . n C 1 58 VAL 58 58 58 VAL VAL C . n C 1 59 VAL 59 59 59 VAL VAL C . n C 1 60 ARG 60 60 60 ARG ARG C . n C 1 61 GLY 61 61 61 GLY GLY C . n C 1 62 GLY 62 62 62 GLY GLY C . n C 1 63 LYS 63 63 63 LYS LYS C . n C 1 64 SER 64 64 64 SER SER C . n C 1 65 THR 65 65 65 THR THR C . n C 1 66 ARG 66 66 66 ARG ARG C . n C 1 67 GLY 67 67 67 GLY GLY C . n C 1 68 ASN 68 68 68 ASN ASN C . n C 1 69 VAL 69 69 69 VAL VAL C . n C 1 70 VAL 70 70 70 VAL VAL C . n C 1 71 PRO 71 71 71 PRO PRO C . n C 1 72 ALA 72 72 72 ALA ALA C . n C 1 73 CYS 73 73 73 CYS CYS C . n C 1 74 LYS 74 74 74 LYS LYS C . n C 1 75 GLU 75 75 75 GLU GLU C . n C 1 76 CYS 76 76 76 CYS CYS C . n C 1 77 ASN 77 77 77 ASN ASN C . n C 1 78 ASN 78 78 78 ASN ASN C . n C 1 79 ARG 79 79 79 ARG ARG C . n C 1 80 LYS 80 80 80 LYS LYS C . n C 1 81 LYS 81 81 81 LYS LYS C . n C 1 82 TYR 82 82 82 TYR TYR C . n C 1 83 LEU 83 83 83 LEU LEU C . n C 1 84 LEU 84 84 84 LEU LEU C . n C 1 85 PRO 85 85 85 PRO PRO C . n C 1 86 VAL 86 86 86 VAL VAL C . n C 1 87 GLU 87 87 87 GLU GLU C . n C 1 88 TRP 88 88 88 TRP TRP C . n C 1 89 GLU 89 89 89 GLU GLU C . n C 1 90 GLU 90 90 90 GLU GLU C . n C 1 91 TYR 91 91 91 TYR TYR C . n C 1 92 LEU 92 92 92 LEU LEU C . n C 1 93 ASP 93 93 93 ASP ASP C . n C 1 94 SER 94 94 94 SER SER C . n C 1 95 LEU 95 95 95 LEU LEU C . n C 1 96 GLU 96 96 ? ? ? C . n C 1 97 SER 97 97 ? ? ? C . n C 1 98 GLU 98 98 ? ? ? C . n C 1 99 PRO 99 99 ? ? ? C . n C 1 100 SER 100 100 ? ? ? C . n C 1 101 ASP 101 101 ? ? ? C . n C 1 102 GLY 102 102 ? ? ? C . n C 1 103 GLU 103 103 ? ? ? C . n C 1 104 GLY 104 104 ? ? ? C . n C 1 105 LEU 105 105 ? ? ? C . n C 1 106 GLU 106 106 ? ? ? C . n C 1 107 HIS 107 107 ? ? ? C . n C 1 108 HIS 108 108 ? ? ? C . n C 1 109 HIS 109 109 ? ? ? C . n C 1 110 HIS 110 110 ? ? ? C . n C 1 111 HIS 111 111 ? ? ? C . n C 1 112 HIS 112 112 ? ? ? C . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Northeast Structural Genomics Consortium' _pdbx_SG_project.initial_of_center NESG # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code D 2 ZN 1 201 2 ZN ZN A . E 2 ZN 1 201 1 ZN ZN B . F 3 MG 1 202 1 MG MG B . G 2 ZN 1 201 3 ZN ZN C . H 4 HOH 1 301 2 HOH HOH A . H 4 HOH 2 302 5 HOH HOH A . H 4 HOH 3 303 7 HOH HOH A . H 4 HOH 4 304 10 HOH HOH A . H 4 HOH 5 305 11 HOH HOH A . H 4 HOH 6 306 15 HOH HOH A . H 4 HOH 7 307 18 HOH HOH A . H 4 HOH 8 308 19 HOH HOH A . I 4 HOH 1 301 8 HOH HOH B . I 4 HOH 2 302 17 HOH HOH B . I 4 HOH 3 303 20 HOH HOH B . J 4 HOH 1 301 14 HOH HOH C . J 4 HOH 2 302 16 HOH HOH C . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 1 A MSE 1 ? MET SELENOMETHIONINE 2 A MSE 52 A MSE 52 ? MET SELENOMETHIONINE 3 B MSE 52 B MSE 52 ? MET SELENOMETHIONINE 4 C MSE 52 C MSE 52 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 1540 ? 1 MORE -12 ? 1 'SSA (A^2)' 13430 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 SG ? A CYS 41 ? A CYS 41 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 SG ? A CYS 38 ? A CYS 38 ? 1_555 102.3 ? 2 SG ? A CYS 41 ? A CYS 41 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 SG ? A CYS 73 ? A CYS 73 ? 1_555 120.0 ? 3 SG ? A CYS 38 ? A CYS 38 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 SG ? A CYS 73 ? A CYS 73 ? 1_555 108.1 ? 4 SG ? A CYS 41 ? A CYS 41 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 SG ? A CYS 76 ? A CYS 76 ? 1_555 106.5 ? 5 SG ? A CYS 38 ? A CYS 38 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 SG ? A CYS 76 ? A CYS 76 ? 1_555 111.3 ? 6 SG ? A CYS 73 ? A CYS 73 ? 1_555 ZN ? D ZN . ? A ZN 201 ? 1_555 SG ? A CYS 76 ? A CYS 76 ? 1_555 108.4 ? 7 SG ? B CYS 38 ? B CYS 38 ? 1_555 ZN ? E ZN . ? B ZN 201 ? 1_555 SG ? B CYS 73 ? B CYS 73 ? 1_555 113.2 ? 8 SG ? B CYS 38 ? B CYS 38 ? 1_555 ZN ? E ZN . ? B ZN 201 ? 1_555 SG ? B CYS 41 ? B CYS 41 ? 1_555 99.7 ? 9 SG ? B CYS 73 ? B CYS 73 ? 1_555 ZN ? E ZN . ? B ZN 201 ? 1_555 SG ? B CYS 41 ? B CYS 41 ? 1_555 129.3 ? 10 SG ? B CYS 38 ? B CYS 38 ? 1_555 ZN ? E ZN . ? B ZN 201 ? 1_555 SG ? B CYS 76 ? B CYS 76 ? 1_555 115.7 ? 11 SG ? B CYS 73 ? B CYS 73 ? 1_555 ZN ? E ZN . ? B ZN 201 ? 1_555 SG ? B CYS 76 ? B CYS 76 ? 1_555 104.9 ? 12 SG ? B CYS 41 ? B CYS 41 ? 1_555 ZN ? E ZN . ? B ZN 201 ? 1_555 SG ? B CYS 76 ? B CYS 76 ? 1_555 93.1 ? 13 SG ? C CYS 41 ? C CYS 41 ? 1_555 ZN ? G ZN . ? C ZN 201 ? 1_555 SG ? C CYS 38 ? C CYS 38 ? 1_555 105.5 ? 14 SG ? C CYS 41 ? C CYS 41 ? 1_555 ZN ? G ZN . ? C ZN 201 ? 1_555 SG ? C CYS 76 ? C CYS 76 ? 1_555 111.9 ? 15 SG ? C CYS 38 ? C CYS 38 ? 1_555 ZN ? G ZN . ? C ZN 201 ? 1_555 SG ? C CYS 76 ? C CYS 76 ? 1_555 102.0 ? 16 SG ? C CYS 41 ? C CYS 41 ? 1_555 ZN ? G ZN . ? C ZN 201 ? 1_555 SG ? C CYS 73 ? C CYS 73 ? 1_555 126.1 ? 17 SG ? C CYS 38 ? C CYS 38 ? 1_555 ZN ? G ZN . ? C ZN 201 ? 1_555 SG ? C CYS 73 ? C CYS 73 ? 1_555 102.5 ? 18 SG ? C CYS 76 ? C CYS 76 ? 1_555 ZN ? G ZN . ? C ZN 201 ? 1_555 SG ? C CYS 73 ? C CYS 73 ? 1_555 105.8 ? 19 O ? B ALA 34 ? B ALA 34 ? 1_555 MG ? F MG . ? B MG 202 ? 1_555 O ? A LYS 81 ? A LYS 81 ? 1_555 89.9 ? # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-10-10 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x -3.8005 _pdbx_refine_tls.origin_y -21.7128 _pdbx_refine_tls.origin_z -28.3897 _pdbx_refine_tls.T[1][1] 0.3313 _pdbx_refine_tls.T[2][2] 0.3374 _pdbx_refine_tls.T[3][3] 0.3590 _pdbx_refine_tls.T[1][2] -0.0003 _pdbx_refine_tls.T[1][3] -0.0252 _pdbx_refine_tls.T[2][3] 0.0637 _pdbx_refine_tls.L[1][1] 0.0865 _pdbx_refine_tls.L[2][2] 0.3864 _pdbx_refine_tls.L[3][3] 0.7037 _pdbx_refine_tls.L[1][2] 0.0028 _pdbx_refine_tls.L[1][3] -0.0703 _pdbx_refine_tls.L[2][3] 0.5011 _pdbx_refine_tls.S[1][1] -0.0047 _pdbx_refine_tls.S[1][2] -0.1243 _pdbx_refine_tls.S[1][3] 0.2270 _pdbx_refine_tls.S[2][1] 0.1406 _pdbx_refine_tls.S[2][2] 0.0427 _pdbx_refine_tls.S[2][3] -0.0468 _pdbx_refine_tls.S[3][1] 0.3031 _pdbx_refine_tls.S[3][2] -0.0834 _pdbx_refine_tls.S[3][3] 0.0076 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id ? _pdbx_refine_tls_group.beg_auth_seq_id ? _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_auth_asym_id ? _pdbx_refine_tls_group.end_auth_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? _pdbx_refine_tls_group.selection_details all # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 PHENIX dev_988 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 2 PDB_EXTRACT 3.100 'Jan. 22, 2010' package PDB help@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 ADSC Quantum ? ? ? ? 'data collection' ? ? ? 4 HKL-2000 . ? ? ? ? 'data reduction' ? ? ? 5 SCALEPACK . ? ? ? ? 'data scaling' ? ? ? 6 PHENIX . ? ? ? ? phasing ? ? ? # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 CD1 _pdbx_validate_symm_contact.auth_asym_id_1 A _pdbx_validate_symm_contact.auth_comp_id_1 ILE _pdbx_validate_symm_contact.auth_seq_id_1 5 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 CD1 _pdbx_validate_symm_contact.auth_asym_id_2 A _pdbx_validate_symm_contact.auth_comp_id_2 ILE _pdbx_validate_symm_contact.auth_seq_id_2 5 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 2_545 _pdbx_validate_symm_contact.dist 1.92 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO A 47 ? ? -38.26 -33.15 2 1 PRO A 85 ? ? -35.81 -27.49 3 1 ASP A 93 ? ? -53.38 0.27 4 1 GLU A 96 ? ? -79.86 -100.92 5 1 LYS B 17 ? ? -57.51 3.10 6 1 ARG B 24 ? ? -56.04 -8.27 7 1 LEU B 55 ? ? -67.28 -71.61 8 1 ASN B 68 ? ? -151.78 -4.04 9 1 GLU B 75 ? ? -46.34 -72.82 10 1 LYS C 17 ? ? -58.27 -6.97 11 1 GLU C 18 ? ? -74.15 -72.18 12 1 ALA C 20 ? ? -50.91 -78.80 13 1 PRO C 57 ? ? -34.56 143.25 14 1 TYR C 82 ? ? -145.94 -32.65 15 1 LEU C 84 ? ? -49.63 159.68 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 98 ? A GLU 98 2 1 Y 1 A PRO 99 ? A PRO 99 3 1 Y 1 A SER 100 ? A SER 100 4 1 Y 1 A ASP 101 ? A ASP 101 5 1 Y 1 A GLY 102 ? A GLY 102 6 1 Y 1 A GLU 103 ? A GLU 103 7 1 Y 1 A GLY 104 ? A GLY 104 8 1 Y 1 A LEU 105 ? A LEU 105 9 1 Y 1 A GLU 106 ? A GLU 106 10 1 Y 1 A HIS 107 ? A HIS 107 11 1 Y 1 A HIS 108 ? A HIS 108 12 1 Y 1 A HIS 109 ? A HIS 109 13 1 Y 1 A HIS 110 ? A HIS 110 14 1 Y 1 A HIS 111 ? A HIS 111 15 1 Y 1 A HIS 112 ? A HIS 112 16 1 Y 1 B MSE 1 ? B MSE 1 17 1 Y 1 B ASN 2 ? B ASN 2 18 1 Y 1 B TYR 3 ? B TYR 3 19 1 Y 1 B PHE 4 ? B PHE 4 20 1 Y 1 B ILE 5 ? B ILE 5 21 1 Y 1 B GLU 96 ? B GLU 96 22 1 Y 1 B SER 97 ? B SER 97 23 1 Y 1 B GLU 98 ? B GLU 98 24 1 Y 1 B PRO 99 ? B PRO 99 25 1 Y 1 B SER 100 ? B SER 100 26 1 Y 1 B ASP 101 ? B ASP 101 27 1 Y 1 B GLY 102 ? B GLY 102 28 1 Y 1 B GLU 103 ? B GLU 103 29 1 Y 1 B GLY 104 ? B GLY 104 30 1 Y 1 B LEU 105 ? B LEU 105 31 1 Y 1 B GLU 106 ? B GLU 106 32 1 Y 1 B HIS 107 ? B HIS 107 33 1 Y 1 B HIS 108 ? B HIS 108 34 1 Y 1 B HIS 109 ? B HIS 109 35 1 Y 1 B HIS 110 ? B HIS 110 36 1 Y 1 B HIS 111 ? B HIS 111 37 1 Y 1 B HIS 112 ? B HIS 112 38 1 Y 1 C MSE 1 ? C MSE 1 39 1 Y 1 C ASN 2 ? C ASN 2 40 1 Y 1 C TYR 3 ? C TYR 3 41 1 Y 1 C PHE 4 ? C PHE 4 42 1 Y 1 C ILE 5 ? C ILE 5 43 1 Y 1 C VAL 6 ? C VAL 6 44 1 Y 1 C GLU 7 ? C GLU 7 45 1 Y 1 C VAL 8 ? C VAL 8 46 1 Y 1 C SER 9 ? C SER 9 47 1 Y 1 C GLU 10 ? C GLU 10 48 1 Y 1 C GLN 11 ? C GLN 11 49 1 Y 1 C GLU 12 ? C GLU 12 50 1 Y 1 C VAL 13 ? C VAL 13 51 1 Y 1 C LYS 14 ? C LYS 14 52 1 Y 1 C GLU 96 ? C GLU 96 53 1 Y 1 C SER 97 ? C SER 97 54 1 Y 1 C GLU 98 ? C GLU 98 55 1 Y 1 C PRO 99 ? C PRO 99 56 1 Y 1 C SER 100 ? C SER 100 57 1 Y 1 C ASP 101 ? C ASP 101 58 1 Y 1 C GLY 102 ? C GLY 102 59 1 Y 1 C GLU 103 ? C GLU 103 60 1 Y 1 C GLY 104 ? C GLY 104 61 1 Y 1 C LEU 105 ? C LEU 105 62 1 Y 1 C GLU 106 ? C GLU 106 63 1 Y 1 C HIS 107 ? C HIS 107 64 1 Y 1 C HIS 108 ? C HIS 108 65 1 Y 1 C HIS 109 ? C HIS 109 66 1 Y 1 C HIS 110 ? C HIS 110 67 1 Y 1 C HIS 111 ? C HIS 111 68 1 Y 1 C HIS 112 ? C HIS 112 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'ZINC ION' ZN 3 'MAGNESIUM ION' MG 4 water HOH #