data_4HAM # _entry.id 4HAM # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.399 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4HAM pdb_00004ham 10.2210/pdb4ham/pdb RCSB RCSB075228 ? ? WWPDB D_1000075228 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-17 2 'Structure model' 1 1 2024-11-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Derived calculations' 4 2 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_entry_details 5 2 'Structure model' pdbx_modification_feature 6 2 'Structure model' struct_conn 7 2 'Structure model' struct_ref_seq_dif 8 2 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 4 2 'Structure model' '_struct_ref_seq_dif.details' 5 2 'Structure model' '_struct_site.pdbx_auth_asym_id' 6 2 'Structure model' '_struct_site.pdbx_auth_comp_id' 7 2 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4HAM _pdbx_database_status.recvd_initial_deposition_date 2012-09-27 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id MCSG-APC106881 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kim, Y.' 1 'Chhor, G.' 2 'Endres, M.' 3 'Joachimiak, A.' 4 'Midwest Center for Structural Genomics (MCSG)' 5 # _citation.id primary _citation.title 'Crystal Structure of Transcriptional Antiterminator from Listeria monocytogenes EGD-e' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Kim, Y.' 1 ? primary 'Chhor, G.' 2 ? primary 'Endres, M.' 3 ? primary 'Joachimiak, A.' 4 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Lmo2241 protein' 15056.078 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 2 ? ? ? ? 3 non-polymer syn GLYCEROL 92.094 4 ? ? ? ? 4 water nat water 18.015 95 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Transcriptional antiterminator BglG' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNA(MSE)FTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGT FIANQTDKLSSPKKLAETRTKLKETILDLVYLGVNIEEIHKLADEYSQDIIGGDVVEG ; _entity_poly.pdbx_seq_one_letter_code_can ;SNAMFTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGTFIAN QTDKLSSPKKLAETRTKLKETILDLVYLGVNIEEIHKLADEYSQDIIGGDVVEG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier MCSG-APC106881 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 GLYCEROL GOL 4 water HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 MSE n 1 5 PHE n 1 6 THR n 1 7 ILE n 1 8 ASN n 1 9 THR n 1 10 LYS n 1 11 SER n 1 12 GLN n 1 13 LEU n 1 14 PRO n 1 15 ILE n 1 16 TYR n 1 17 GLU n 1 18 GLN n 1 19 ILE n 1 20 VAL n 1 21 GLN n 1 22 LYS n 1 23 ILE n 1 24 LYS n 1 25 GLU n 1 26 GLN n 1 27 VAL n 1 28 VAL n 1 29 LYS n 1 30 GLY n 1 31 VAL n 1 32 LEU n 1 33 GLN n 1 34 GLU n 1 35 GLY n 1 36 GLU n 1 37 LYS n 1 38 ILE n 1 39 LEU n 1 40 SER n 1 41 ILE n 1 42 ARG n 1 43 GLU n 1 44 PHE n 1 45 ALA n 1 46 SER n 1 47 ARG n 1 48 ILE n 1 49 GLY n 1 50 VAL n 1 51 ASN n 1 52 PRO n 1 53 ASN n 1 54 THR n 1 55 VAL n 1 56 SER n 1 57 LYS n 1 58 ALA n 1 59 TYR n 1 60 GLN n 1 61 GLU n 1 62 LEU n 1 63 GLU n 1 64 ARG n 1 65 GLN n 1 66 GLU n 1 67 VAL n 1 68 ILE n 1 69 ILE n 1 70 THR n 1 71 VAL n 1 72 LYS n 1 73 GLY n 1 74 LYS n 1 75 GLY n 1 76 THR n 1 77 PHE n 1 78 ILE n 1 79 ALA n 1 80 ASN n 1 81 GLN n 1 82 THR n 1 83 ASP n 1 84 LYS n 1 85 LEU n 1 86 SER n 1 87 SER n 1 88 PRO n 1 89 LYS n 1 90 LYS n 1 91 LEU n 1 92 ALA n 1 93 GLU n 1 94 THR n 1 95 ARG n 1 96 THR n 1 97 LYS n 1 98 LEU n 1 99 LYS n 1 100 GLU n 1 101 THR n 1 102 ILE n 1 103 LEU n 1 104 ASP n 1 105 LEU n 1 106 VAL n 1 107 TYR n 1 108 LEU n 1 109 GLY n 1 110 VAL n 1 111 ASN n 1 112 ILE n 1 113 GLU n 1 114 GLU n 1 115 ILE n 1 116 HIS n 1 117 LYS n 1 118 LEU n 1 119 ALA n 1 120 ASP n 1 121 GLU n 1 122 TYR n 1 123 SER n 1 124 GLN n 1 125 ASP n 1 126 ILE n 1 127 ILE n 1 128 GLY n 1 129 GLY n 1 130 ASP n 1 131 VAL n 1 132 VAL n 1 133 GLU n 1 134 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene lmo2241 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain EGD-e _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Listeria monocytogenes' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 169963 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21 magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 -2 -2 SER SER A . n A 1 2 ASN 2 -1 -1 ASN ASN A . n A 1 3 ALA 3 0 0 ALA ALA A . n A 1 4 MSE 4 1 1 MSE MSE A . n A 1 5 PHE 5 2 2 PHE PHE A . n A 1 6 THR 6 3 3 THR THR A . n A 1 7 ILE 7 4 4 ILE ILE A . n A 1 8 ASN 8 5 5 ASN ASN A . n A 1 9 THR 9 6 6 THR THR A . n A 1 10 LYS 10 7 7 LYS LYS A . n A 1 11 SER 11 8 8 SER SER A . n A 1 12 GLN 12 9 9 GLN GLN A . n A 1 13 LEU 13 10 10 LEU LEU A . n A 1 14 PRO 14 11 11 PRO PRO A . n A 1 15 ILE 15 12 12 ILE ILE A . n A 1 16 TYR 16 13 13 TYR TYR A . n A 1 17 GLU 17 14 14 GLU GLU A . n A 1 18 GLN 18 15 15 GLN GLN A . n A 1 19 ILE 19 16 16 ILE ILE A . n A 1 20 VAL 20 17 17 VAL VAL A . n A 1 21 GLN 21 18 18 GLN GLN A . n A 1 22 LYS 22 19 19 LYS LYS A . n A 1 23 ILE 23 20 20 ILE ILE A . n A 1 24 LYS 24 21 21 LYS LYS A . n A 1 25 GLU 25 22 22 GLU GLU A . n A 1 26 GLN 26 23 23 GLN GLN A . n A 1 27 VAL 27 24 24 VAL VAL A . n A 1 28 VAL 28 25 25 VAL VAL A . n A 1 29 LYS 29 26 26 LYS LYS A . n A 1 30 GLY 30 27 27 GLY GLY A . n A 1 31 VAL 31 28 28 VAL VAL A . n A 1 32 LEU 32 29 29 LEU LEU A . n A 1 33 GLN 33 30 30 GLN GLN A . n A 1 34 GLU 34 31 31 GLU GLU A . n A 1 35 GLY 35 32 32 GLY GLY A . n A 1 36 GLU 36 33 33 GLU GLU A . n A 1 37 LYS 37 34 34 LYS LYS A . n A 1 38 ILE 38 35 35 ILE ILE A . n A 1 39 LEU 39 36 36 LEU LEU A . n A 1 40 SER 40 37 37 SER SER A . n A 1 41 ILE 41 38 38 ILE ILE A . n A 1 42 ARG 42 39 39 ARG ARG A . n A 1 43 GLU 43 40 40 GLU GLU A . n A 1 44 PHE 44 41 41 PHE PHE A . n A 1 45 ALA 45 42 42 ALA ALA A . n A 1 46 SER 46 43 43 SER SER A . n A 1 47 ARG 47 44 44 ARG ARG A . n A 1 48 ILE 48 45 45 ILE ILE A . n A 1 49 GLY 49 46 46 GLY GLY A . n A 1 50 VAL 50 47 47 VAL VAL A . n A 1 51 ASN 51 48 48 ASN ASN A . n A 1 52 PRO 52 49 49 PRO PRO A . n A 1 53 ASN 53 50 50 ASN ASN A . n A 1 54 THR 54 51 51 THR THR A . n A 1 55 VAL 55 52 52 VAL VAL A . n A 1 56 SER 56 53 53 SER SER A . n A 1 57 LYS 57 54 54 LYS LYS A . n A 1 58 ALA 58 55 55 ALA ALA A . n A 1 59 TYR 59 56 56 TYR TYR A . n A 1 60 GLN 60 57 57 GLN GLN A . n A 1 61 GLU 61 58 58 GLU GLU A . n A 1 62 LEU 62 59 59 LEU LEU A . n A 1 63 GLU 63 60 60 GLU GLU A . n A 1 64 ARG 64 61 61 ARG ARG A . n A 1 65 GLN 65 62 62 GLN GLN A . n A 1 66 GLU 66 63 63 GLU GLU A . n A 1 67 VAL 67 64 64 VAL VAL A . n A 1 68 ILE 68 65 65 ILE ILE A . n A 1 69 ILE 69 66 66 ILE ILE A . n A 1 70 THR 70 67 67 THR THR A . n A 1 71 VAL 71 68 68 VAL VAL A . n A 1 72 LYS 72 69 69 LYS LYS A . n A 1 73 GLY 73 70 70 GLY GLY A . n A 1 74 LYS 74 71 71 LYS LYS A . n A 1 75 GLY 75 72 72 GLY GLY A . n A 1 76 THR 76 73 73 THR THR A . n A 1 77 PHE 77 74 74 PHE PHE A . n A 1 78 ILE 78 75 75 ILE ILE A . n A 1 79 ALA 79 76 76 ALA ALA A . n A 1 80 ASN 80 77 77 ASN ASN A . n A 1 81 GLN 81 78 78 GLN GLN A . n A 1 82 THR 82 79 79 THR THR A . n A 1 83 ASP 83 80 80 ASP ASP A . n A 1 84 LYS 84 81 81 LYS LYS A . n A 1 85 LEU 85 82 82 LEU LEU A . n A 1 86 SER 86 83 83 SER SER A . n A 1 87 SER 87 84 84 SER SER A . n A 1 88 PRO 88 85 85 PRO PRO A . n A 1 89 LYS 89 86 86 LYS LYS A . n A 1 90 LYS 90 87 87 LYS LYS A . n A 1 91 LEU 91 88 88 LEU LEU A . n A 1 92 ALA 92 89 89 ALA ALA A . n A 1 93 GLU 93 90 90 GLU GLU A . n A 1 94 THR 94 91 91 THR THR A . n A 1 95 ARG 95 92 92 ARG ARG A . n A 1 96 THR 96 93 93 THR THR A . n A 1 97 LYS 97 94 94 LYS LYS A . n A 1 98 LEU 98 95 95 LEU LEU A . n A 1 99 LYS 99 96 96 LYS LYS A . n A 1 100 GLU 100 97 97 GLU GLU A . n A 1 101 THR 101 98 98 THR THR A . n A 1 102 ILE 102 99 99 ILE ILE A . n A 1 103 LEU 103 100 100 LEU LEU A . n A 1 104 ASP 104 101 101 ASP ASP A . n A 1 105 LEU 105 102 102 LEU LEU A . n A 1 106 VAL 106 103 103 VAL VAL A . n A 1 107 TYR 107 104 104 TYR TYR A . n A 1 108 LEU 108 105 105 LEU LEU A . n A 1 109 GLY 109 106 106 GLY GLY A . n A 1 110 VAL 110 107 107 VAL VAL A . n A 1 111 ASN 111 108 108 ASN ASN A . n A 1 112 ILE 112 109 109 ILE ILE A . n A 1 113 GLU 113 110 110 GLU GLU A . n A 1 114 GLU 114 111 111 GLU GLU A . n A 1 115 ILE 115 112 112 ILE ILE A . n A 1 116 HIS 116 113 113 HIS HIS A . n A 1 117 LYS 117 114 114 LYS LYS A . n A 1 118 LEU 118 115 115 LEU LEU A . n A 1 119 ALA 119 116 116 ALA ALA A . n A 1 120 ASP 120 117 117 ASP ASP A . n A 1 121 GLU 121 118 118 GLU GLU A . n A 1 122 TYR 122 119 119 TYR TYR A . n A 1 123 SER 123 120 120 SER SER A . n A 1 124 GLN 124 121 121 GLN GLN A . n A 1 125 ASP 125 122 122 ASP ASP A . n A 1 126 ILE 126 123 123 ILE ILE A . n A 1 127 ILE 127 124 124 ILE ILE A . n A 1 128 GLY 128 125 125 GLY GLY A . n A 1 129 GLY 129 126 126 GLY GLY A . n A 1 130 ASP 130 127 127 ASP ASP A . n A 1 131 VAL 131 128 128 VAL VAL A . n A 1 132 VAL 132 129 129 VAL VAL A . n A 1 133 GLU 133 130 130 GLU GLU A . n A 1 134 GLY 134 131 131 GLY GLY A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 201 151 SO4 SO4 A . C 2 SO4 1 202 152 SO4 SO4 A . D 3 GOL 1 203 153 GOL GOL A . E 3 GOL 1 204 154 GOL GOL A . F 3 GOL 1 205 155 GOL GOL A . G 3 GOL 1 206 156 GOL GOL A . H 4 HOH 1 301 1 HOH HOH A . H 4 HOH 2 302 2 HOH HOH A . H 4 HOH 3 303 3 HOH HOH A . H 4 HOH 4 304 4 HOH HOH A . H 4 HOH 5 305 5 HOH HOH A . H 4 HOH 6 306 6 HOH HOH A . H 4 HOH 7 307 7 HOH HOH A . H 4 HOH 8 308 8 HOH HOH A . H 4 HOH 9 309 9 HOH HOH A . H 4 HOH 10 310 10 HOH HOH A . H 4 HOH 11 311 11 HOH HOH A . H 4 HOH 12 312 12 HOH HOH A . H 4 HOH 13 313 13 HOH HOH A . H 4 HOH 14 314 14 HOH HOH A . H 4 HOH 15 315 15 HOH HOH A . H 4 HOH 16 316 16 HOH HOH A . H 4 HOH 17 317 17 HOH HOH A . H 4 HOH 18 318 18 HOH HOH A . H 4 HOH 19 319 19 HOH HOH A . H 4 HOH 20 320 20 HOH HOH A . H 4 HOH 21 321 21 HOH HOH A . H 4 HOH 22 322 22 HOH HOH A . H 4 HOH 23 323 23 HOH HOH A . H 4 HOH 24 324 24 HOH HOH A . H 4 HOH 25 325 25 HOH HOH A . H 4 HOH 26 326 26 HOH HOH A . H 4 HOH 27 327 27 HOH HOH A . H 4 HOH 28 328 28 HOH HOH A . H 4 HOH 29 329 29 HOH HOH A . H 4 HOH 30 330 30 HOH HOH A . H 4 HOH 31 331 31 HOH HOH A . H 4 HOH 32 332 32 HOH HOH A . H 4 HOH 33 333 33 HOH HOH A . H 4 HOH 34 334 34 HOH HOH A . H 4 HOH 35 335 35 HOH HOH A . H 4 HOH 36 336 36 HOH HOH A . H 4 HOH 37 337 37 HOH HOH A . H 4 HOH 38 338 38 HOH HOH A . H 4 HOH 39 339 39 HOH HOH A . H 4 HOH 40 340 40 HOH HOH A . H 4 HOH 41 341 41 HOH HOH A . H 4 HOH 42 342 42 HOH HOH A . H 4 HOH 43 343 43 HOH HOH A . H 4 HOH 44 344 44 HOH HOH A . H 4 HOH 45 345 45 HOH HOH A . H 4 HOH 46 346 46 HOH HOH A . H 4 HOH 47 347 47 HOH HOH A . H 4 HOH 48 348 48 HOH HOH A . H 4 HOH 49 349 49 HOH HOH A . H 4 HOH 50 350 50 HOH HOH A . H 4 HOH 51 351 51 HOH HOH A . H 4 HOH 52 352 52 HOH HOH A . H 4 HOH 53 353 53 HOH HOH A . H 4 HOH 54 354 54 HOH HOH A . H 4 HOH 55 355 55 HOH HOH A . H 4 HOH 56 356 56 HOH HOH A . H 4 HOH 57 357 57 HOH HOH A . H 4 HOH 58 358 58 HOH HOH A . H 4 HOH 59 359 59 HOH HOH A . H 4 HOH 60 360 60 HOH HOH A . H 4 HOH 61 361 61 HOH HOH A . H 4 HOH 62 362 62 HOH HOH A . H 4 HOH 63 363 63 HOH HOH A . H 4 HOH 64 364 64 HOH HOH A . H 4 HOH 65 365 65 HOH HOH A . H 4 HOH 66 366 66 HOH HOH A . H 4 HOH 67 367 67 HOH HOH A . H 4 HOH 68 368 68 HOH HOH A . H 4 HOH 69 369 69 HOH HOH A . H 4 HOH 70 370 70 HOH HOH A . H 4 HOH 71 371 71 HOH HOH A . H 4 HOH 72 372 72 HOH HOH A . H 4 HOH 73 373 73 HOH HOH A . H 4 HOH 74 374 74 HOH HOH A . H 4 HOH 75 375 75 HOH HOH A . H 4 HOH 76 376 76 HOH HOH A . H 4 HOH 77 377 77 HOH HOH A . H 4 HOH 78 378 78 HOH HOH A . H 4 HOH 79 379 79 HOH HOH A . H 4 HOH 80 380 80 HOH HOH A . H 4 HOH 81 381 81 HOH HOH A . H 4 HOH 82 382 82 HOH HOH A . H 4 HOH 83 383 83 HOH HOH A . H 4 HOH 84 384 84 HOH HOH A . H 4 HOH 85 385 85 HOH HOH A . H 4 HOH 86 386 86 HOH HOH A . H 4 HOH 87 387 87 HOH HOH A . H 4 HOH 88 388 88 HOH HOH A . H 4 HOH 89 389 89 HOH HOH A . H 4 HOH 90 390 90 HOH HOH A . H 4 HOH 91 391 91 HOH HOH A . H 4 HOH 92 392 92 HOH HOH A . H 4 HOH 93 393 93 HOH HOH A . H 4 HOH 94 394 94 HOH HOH A . H 4 HOH 95 395 95 HOH HOH A . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 HKL-3000 'data collection' . ? 2 HKL-3000 phasing . ? 3 PHENIX 'model building' . ? 4 PHENIX refinement '(phenix.refine: 1.8.1_1161)' ? 5 HKL-3000 'data reduction' . ? 6 HKL-3000 'data scaling' . ? 7 PHENIX phasing . ? 8 # _cell.entry_id 4HAM _cell.length_a 37.122 _cell.length_b 92.152 _cell.length_c 91.999 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4HAM _symmetry.space_group_name_H-M 'C 2 2 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 20 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4HAM _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.61 _exptl_crystal.density_percent_sol 52.92 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '2.0 M ammonium sulfate, 0.1 M HEPES pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details mirrors _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2012-08-18 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97935 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97935 # _reflns.entry_id 4HAM _reflns.observed_criterion_sigma_I 0.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.9 _reflns.number_obs 12529 _reflns.number_all 12529 _reflns.percent_possible_obs 98.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.087 _reflns.pdbx_netI_over_sigmaI 9.2 _reflns.B_iso_Wilson_estimate 28.4 _reflns.pdbx_redundancy 4.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.90 _reflns_shell.d_res_low 1.93 _reflns_shell.percent_possible_all 99.5 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.561 _reflns_shell.meanI_over_sigI_obs 2.2 _reflns_shell.pdbx_redundancy 4.6 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 607 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 9.97 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_R_Free_selection_details random _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4HAM _refine.aniso_B[2][3] ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.19 _refine.aniso_B[1][3] ? _refine.pdbx_stereochemistry_target_values MLHL _refine.aniso_B[3][3] ? _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] ? _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.177 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model mixed _refine.pdbx_method_to_determine_struct SAD _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 1221 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 0.00 _refine.ls_percent_reflns_obs 96.26 _refine.ls_R_factor_R_work 0.173 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.905 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.B_iso_mean 33.9 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all 0.177 _refine.aniso_B[2][2] ? _refine.B_iso_max ? _refine.pdbx_ls_sigma_I ? _refine.ls_d_res_low 32.248 _refine.pdbx_overall_phase_error 20.93 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] ? _refine.ls_R_factor_R_free 0.216 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 12249 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all 12249 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1054 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 34 _refine_hist.number_atoms_solvent 95 _refine_hist.number_atoms_total 1183 _refine_hist.d_res_high 1.905 _refine_hist.d_res_low 32.248 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 1180 ? 'X-RAY DIFFRACTION' f_angle_d 0.854 ? ? 1596 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 15.344 ? ? 465 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.061 ? ? 182 ? 'X-RAY DIFFRACTION' f_plane_restr 0.003 ? ? 207 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.9051 1.9814 1145 0.2218 92.00 0.2541 . . 124 . . 1269 . 'X-RAY DIFFRACTION' . 1.9814 2.0715 1211 0.1862 96.00 0.2311 . . 134 . . 1345 . 'X-RAY DIFFRACTION' . 2.0715 2.1807 1209 0.1691 97.00 0.2522 . . 134 . . 1343 . 'X-RAY DIFFRACTION' . 2.1807 2.3173 1222 0.1658 97.00 0.2270 . . 135 . . 1357 . 'X-RAY DIFFRACTION' . 2.3173 2.4962 1224 0.1724 97.00 0.2524 . . 135 . . 1359 . 'X-RAY DIFFRACTION' . 2.4962 2.7473 1233 0.1801 98.00 0.2205 . . 138 . . 1371 . 'X-RAY DIFFRACTION' . 2.7473 3.1445 1248 0.1768 97.00 0.2292 . . 139 . . 1387 . 'X-RAY DIFFRACTION' . 3.1445 3.9606 1252 0.1644 97.00 0.2009 . . 139 . . 1391 . 'X-RAY DIFFRACTION' . 3.9606 32.2530 1284 0.1701 95.00 0.1929 . . 143 . . 1427 . 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4HAM _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4HAM _struct.title 'Crystal Structure of Transcriptional Antiterminator from Listeria monocytogenes EGD-e' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.pdbx_keywords TRANSCRIPTION _struct_keywords.text ;Structural Genomics, PSI-Biology, Midwest Center for Structural Genomics, MCSG, winged helix-turn-helix, four helix bundle, transcriptional regulator, TRANSCRIPTION ; _struct_keywords.entry_id 4HAM # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 2 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 4 ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q8Y535_LISMO _struct_ref.pdbx_db_accession Q8Y535 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MFTINTKSQLPIYEQIVQKIKEQVVKGVLQEGEKILSIREFASRIGVNPNTVSKAYQELERQEVIITVKGKGTFIANQTD KLSSPKKLAETRTKLKETILDLVYLGVNIEEIHKLADEYSQDIIGGDVVEG ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4HAM _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 134 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q8Y535 _struct_ref_seq.db_align_beg 1 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 131 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 1 _struct_ref_seq.pdbx_auth_seq_align_end 131 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4HAM SER A 1 ? UNP Q8Y535 ? ? 'expression tag' -2 1 1 4HAM ASN A 2 ? UNP Q8Y535 ? ? 'expression tag' -1 2 1 4HAM ALA A 3 ? UNP Q8Y535 ? ? 'expression tag' 0 3 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details dimeric _pdbx_struct_assembly.oligomeric_count 2 # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 6400 ? 1 MORE -91 ? 1 'SSA (A^2)' 15790 ? # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_566 x,-y+1,-z+1 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 92.1520000000 0.0000000000 0.0000000000 -1.0000000000 91.9990000000 # _struct_biol.id 1 _struct_biol.details 'dimer is formed by: x,y,z and x,-y+1,-z+1' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PRO A 14 ? LYS A 29 ? PRO A 11 LYS A 26 1 ? 16 HELX_P HELX_P2 2 SER A 40 ? GLY A 49 ? SER A 37 GLY A 46 1 ? 10 HELX_P HELX_P3 3 ASN A 51 ? GLN A 65 ? ASN A 48 GLN A 62 1 ? 15 HELX_P HELX_P4 4 SER A 87 ? LEU A 108 ? SER A 84 LEU A 105 1 ? 22 HELX_P HELX_P5 5 ASN A 111 ? GLY A 128 ? ASN A 108 GLY A 125 1 ? 18 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A ALA 3 C ? ? ? 1_555 A MSE 4 N ? ? A ALA 0 A MSE 1 1_555 ? ? ? ? ? ? ? 1.330 ? ? covale2 covale both ? A MSE 4 C ? ? ? 1_555 A PHE 5 N ? ? A MSE 1 A PHE 2 1_555 ? ? ? ? ? ? ? 1.325 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # _pdbx_modification_feature.ordinal 1 _pdbx_modification_feature.label_comp_id MSE _pdbx_modification_feature.label_asym_id A _pdbx_modification_feature.label_seq_id 4 _pdbx_modification_feature.label_alt_id ? _pdbx_modification_feature.modified_residue_label_comp_id . _pdbx_modification_feature.modified_residue_label_asym_id . _pdbx_modification_feature.modified_residue_label_seq_id . _pdbx_modification_feature.modified_residue_label_alt_id . _pdbx_modification_feature.auth_comp_id MSE _pdbx_modification_feature.auth_asym_id A _pdbx_modification_feature.auth_seq_id 1 _pdbx_modification_feature.PDB_ins_code ? _pdbx_modification_feature.symmetry 1_555 _pdbx_modification_feature.modified_residue_auth_comp_id . _pdbx_modification_feature.modified_residue_auth_asym_id . _pdbx_modification_feature.modified_residue_auth_seq_id . _pdbx_modification_feature.modified_residue_PDB_ins_code . _pdbx_modification_feature.modified_residue_symmetry . _pdbx_modification_feature.comp_id_linking_atom . _pdbx_modification_feature.modified_residue_id_linking_atom . _pdbx_modification_feature.modified_residue_id MET _pdbx_modification_feature.ref_pcm_id 1 _pdbx_modification_feature.ref_comp_id MSE _pdbx_modification_feature.type Selenomethionine _pdbx_modification_feature.category 'Named protein modification' # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 3 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LYS A 37 ? ILE A 38 ? LYS A 34 ILE A 35 A 2 GLY A 75 ? ILE A 78 ? GLY A 72 ILE A 75 A 3 ILE A 68 ? VAL A 71 ? ILE A 65 VAL A 68 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ILE A 38 ? N ILE A 35 O THR A 76 ? O THR A 73 A 2 3 O GLY A 75 ? O GLY A 72 N VAL A 71 ? N VAL A 68 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 201 ? 3 'BINDING SITE FOR RESIDUE SO4 A 201' AC2 Software A SO4 202 ? 5 'BINDING SITE FOR RESIDUE SO4 A 202' AC3 Software A GOL 203 ? 3 'BINDING SITE FOR RESIDUE GOL A 203' AC4 Software A GOL 204 ? 4 'BINDING SITE FOR RESIDUE GOL A 204' AC5 Software A GOL 205 ? 4 'BINDING SITE FOR RESIDUE GOL A 205' AC6 Software A GOL 206 ? 5 'BINDING SITE FOR RESIDUE GOL A 206' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 3 SER A 11 ? SER A 8 . ? 1_555 ? 2 AC1 3 GLN A 12 ? GLN A 9 . ? 1_555 ? 3 AC1 3 THR A 96 ? THR A 93 . ? 4_566 ? 4 AC2 5 ALA A 3 ? ALA A 0 . ? 8_556 ? 5 AC2 5 MSE A 4 ? MSE A 1 . ? 8_556 ? 6 AC2 5 ARG A 47 ? ARG A 44 . ? 8_556 ? 7 AC2 5 ASN A 51 ? ASN A 48 . ? 1_555 ? 8 AC2 5 HOH H . ? HOH A 366 . ? 1_555 ? 9 AC3 3 SER A 40 ? SER A 37 . ? 1_555 ? 10 AC3 3 ILE A 41 ? ILE A 38 . ? 1_555 ? 11 AC3 3 ARG A 42 ? ARG A 39 . ? 1_555 ? 12 AC4 4 GLN A 81 ? GLN A 78 . ? 1_555 ? 13 AC4 4 LYS A 84 ? LYS A 81 . ? 1_555 ? 14 AC4 4 VAL A 106 ? VAL A 103 . ? 4_566 ? 15 AC4 4 TYR A 107 ? TYR A 104 . ? 4_566 ? 16 AC5 4 GLU A 36 ? GLU A 33 . ? 1_555 ? 17 AC5 4 LYS A 37 ? LYS A 34 . ? 1_555 ? 18 AC5 4 LYS A 74 ? LYS A 71 . ? 3_756 ? 19 AC5 4 HOH H . ? HOH A 376 . ? 1_555 ? 20 AC6 5 PRO A 14 ? PRO A 11 . ? 1_555 ? 21 AC6 5 ILE A 15 ? ILE A 12 . ? 1_555 ? 22 AC6 5 HOH H . ? HOH A 305 . ? 1_555 ? 23 AC6 5 HOH H . ? HOH A 314 . ? 1_555 ? 24 AC6 5 HOH H . ? HOH A 377 . ? 1_555 ? # _pdbx_entry_details.entry_id 4HAM _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 OD2 _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 ASP _pdbx_validate_close_contact.auth_seq_id_1 122 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 B _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 348 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.16 # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Midwest Center for Structural Genomics' _pdbx_SG_project.initial_of_center MCSG _pdbx_SG_project.id 1 # _pdbx_struct_mod_residue.id 1 _pdbx_struct_mod_residue.label_asym_id A _pdbx_struct_mod_residue.label_comp_id MSE _pdbx_struct_mod_residue.label_seq_id 4 _pdbx_struct_mod_residue.auth_asym_id A _pdbx_struct_mod_residue.auth_comp_id MSE _pdbx_struct_mod_residue.auth_seq_id 1 _pdbx_struct_mod_residue.PDB_ins_code ? _pdbx_struct_mod_residue.parent_comp_id MET _pdbx_struct_mod_residue.details SELENOMETHIONINE # _pdbx_struct_special_symmetry.id 1 _pdbx_struct_special_symmetry.PDB_model_num 1 _pdbx_struct_special_symmetry.auth_asym_id A _pdbx_struct_special_symmetry.auth_comp_id HOH _pdbx_struct_special_symmetry.auth_seq_id 367 _pdbx_struct_special_symmetry.PDB_ins_code ? _pdbx_struct_special_symmetry.label_asym_id H _pdbx_struct_special_symmetry.label_comp_id HOH _pdbx_struct_special_symmetry.label_seq_id . # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 36.5178 28.9087 44.1480 0.3477 0.2913 0.3187 -0.0019 0.0396 0.0520 3.6167 2.0471 2.1916 0.1284 0.4682 2.1276 0.2654 -0.1750 0.0432 -0.3380 -0.5005 0.1522 0.0221 0.5765 -0.0226 'X-RAY DIFFRACTION' 2 ? refined 33.4578 32.3691 50.3781 0.2086 0.1961 0.2069 -0.0201 0.0072 0.0199 3.1312 0.5548 0.6157 0.0180 -0.8239 0.3131 0.0437 0.1775 0.6054 -0.1333 0.0383 0.0520 -0.1556 -0.1145 -0.0743 'X-RAY DIFFRACTION' 3 ? refined 31.1897 23.3205 59.9162 0.2519 0.2782 0.1891 -0.0174 0.0023 -0.0082 2.1025 1.7504 0.1225 -0.1058 -0.0004 -0.4675 -0.0661 -0.0892 -0.0095 0.2138 0.1060 0.1817 -0.0476 0.0296 -0.0412 'X-RAY DIFFRACTION' 4 ? refined 43.6251 21.3911 50.1312 0.1732 0.2228 0.1936 -0.0018 0.0079 0.0301 2.8279 4.0724 1.4695 2.1133 -1.3414 0.2881 -0.1394 -0.3350 -0.4655 -0.1142 -0.1006 -0.0263 0.2948 0.3208 0.0566 'X-RAY DIFFRACTION' 5 ? refined 43.2727 32.4524 55.4082 0.2126 0.2601 0.2759 -0.0267 -0.0306 -0.0223 1.2436 3.7461 1.6970 -2.1648 -1.2496 2.2689 0.1415 -0.3304 0.6398 0.0575 0.1245 -0.5355 -0.5497 0.4953 -0.0973 'X-RAY DIFFRACTION' 6 ? refined 38.5750 27.6788 64.2830 0.2147 0.2780 0.1649 0.0112 0.0063 -0.0101 1.5994 3.2649 1.9690 -0.8580 0.8040 -2.0556 -0.1652 -0.1532 0.3979 0.2409 -0.0325 -0.7592 -0.0554 0.1461 0.0825 'X-RAY DIFFRACTION' 7 ? refined 27.1850 35.8900 65.7999 0.6957 0.7219 0.5938 0.1707 0.2409 0.0320 0.3282 6.5356 0.9870 -0.6067 0.5742 -1.1531 -0.2897 0.1589 0.3394 1.8750 -0.4427 1.7920 -0.9068 -1.3771 -0.5914 'X-RAY DIFFRACTION' 8 ? refined 28.8638 50.4468 48.6727 0.2586 0.1587 0.2707 0.0001 -0.0157 -0.0111 0.6831 1.7484 4.8315 0.4394 0.2590 -2.5655 -0.0849 -0.0977 0.2240 0.4385 -0.1588 -0.3516 -0.3451 0.3368 0.0515 'X-RAY DIFFRACTION' 9 ? refined 18.8174 41.9495 41.3354 0.2700 0.2345 0.3295 -0.0410 -0.0514 0.0166 0.4653 3.0094 1.1261 0.4731 -0.6086 -1.5652 -0.0975 0.3786 -0.1527 -0.5504 0.2998 0.5579 0.5298 -0.5003 -0.1269 'X-RAY DIFFRACTION' 10 ? refined 18.6744 20.5562 54.7818 0.7512 0.3685 0.5212 0.0520 0.0684 0.0018 0.0285 0.1120 0.1104 -0.0026 0.0541 -0.0818 -0.2305 -0.2654 -0.4542 1.1258 -0.0182 -0.3364 1.0396 0.0440 0.1339 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid -2 through 11 ) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 12 through 26 ) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 27 through 37 ) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 38 through 48 ) ; 'X-RAY DIFFRACTION' 5 5 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 49 through 61 ) ; 'X-RAY DIFFRACTION' 6 6 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 62 through 75 ) ; 'X-RAY DIFFRACTION' 7 7 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 76 through 84 ) ; 'X-RAY DIFFRACTION' 8 8 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 85 through 104 ) ; 'X-RAY DIFFRACTION' 9 9 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 105 through 124 ) ; 'X-RAY DIFFRACTION' 10 10 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resid 125 through 131 ) ; # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 GLN N N N N 74 GLN CA C N S 75 GLN C C N N 76 GLN O O N N 77 GLN CB C N N 78 GLN CG C N N 79 GLN CD C N N 80 GLN OE1 O N N 81 GLN NE2 N N N 82 GLN OXT O N N 83 GLN H H N N 84 GLN H2 H N N 85 GLN HA H N N 86 GLN HB2 H N N 87 GLN HB3 H N N 88 GLN HG2 H N N 89 GLN HG3 H N N 90 GLN HE21 H N N 91 GLN HE22 H N N 92 GLN HXT H N N 93 GLU N N N N 94 GLU CA C N S 95 GLU C C N N 96 GLU O O N N 97 GLU CB C N N 98 GLU CG C N N 99 GLU CD C N N 100 GLU OE1 O N N 101 GLU OE2 O N N 102 GLU OXT O N N 103 GLU H H N N 104 GLU H2 H N N 105 GLU HA H N N 106 GLU HB2 H N N 107 GLU HB3 H N N 108 GLU HG2 H N N 109 GLU HG3 H N N 110 GLU HE2 H N N 111 GLU HXT H N N 112 GLY N N N N 113 GLY CA C N N 114 GLY C C N N 115 GLY O O N N 116 GLY OXT O N N 117 GLY H H N N 118 GLY H2 H N N 119 GLY HA2 H N N 120 GLY HA3 H N N 121 GLY HXT H N N 122 GOL C1 C N N 123 GOL O1 O N N 124 GOL C2 C N N 125 GOL O2 O N N 126 GOL C3 C N N 127 GOL O3 O N N 128 GOL H11 H N N 129 GOL H12 H N N 130 GOL HO1 H N N 131 GOL H2 H N N 132 GOL HO2 H N N 133 GOL H31 H N N 134 GOL H32 H N N 135 GOL HO3 H N N 136 HIS N N N N 137 HIS CA C N S 138 HIS C C N N 139 HIS O O N N 140 HIS CB C N N 141 HIS CG C Y N 142 HIS ND1 N Y N 143 HIS CD2 C Y N 144 HIS CE1 C Y N 145 HIS NE2 N Y N 146 HIS OXT O N N 147 HIS H H N N 148 HIS H2 H N N 149 HIS HA H N N 150 HIS HB2 H N N 151 HIS HB3 H N N 152 HIS HD1 H N N 153 HIS HD2 H N N 154 HIS HE1 H N N 155 HIS HE2 H N N 156 HIS HXT H N N 157 HOH O O N N 158 HOH H1 H N N 159 HOH H2 H N N 160 ILE N N N N 161 ILE CA C N S 162 ILE C C N N 163 ILE O O N N 164 ILE CB C N S 165 ILE CG1 C N N 166 ILE CG2 C N N 167 ILE CD1 C N N 168 ILE OXT O N N 169 ILE H H N N 170 ILE H2 H N N 171 ILE HA H N N 172 ILE HB H N N 173 ILE HG12 H N N 174 ILE HG13 H N N 175 ILE HG21 H N N 176 ILE HG22 H N N 177 ILE HG23 H N N 178 ILE HD11 H N N 179 ILE HD12 H N N 180 ILE HD13 H N N 181 ILE HXT H N N 182 LEU N N N N 183 LEU CA C N S 184 LEU C C N N 185 LEU O O N N 186 LEU CB C N N 187 LEU CG C N N 188 LEU CD1 C N N 189 LEU CD2 C N N 190 LEU OXT O N N 191 LEU H H N N 192 LEU H2 H N N 193 LEU HA H N N 194 LEU HB2 H N N 195 LEU HB3 H N N 196 LEU HG H N N 197 LEU HD11 H N N 198 LEU HD12 H N N 199 LEU HD13 H N N 200 LEU HD21 H N N 201 LEU HD22 H N N 202 LEU HD23 H N N 203 LEU HXT H N N 204 LYS N N N N 205 LYS CA C N S 206 LYS C C N N 207 LYS O O N N 208 LYS CB C N N 209 LYS CG C N N 210 LYS CD C N N 211 LYS CE C N N 212 LYS NZ N N N 213 LYS OXT O N N 214 LYS H H N N 215 LYS H2 H N N 216 LYS HA H N N 217 LYS HB2 H N N 218 LYS HB3 H N N 219 LYS HG2 H N N 220 LYS HG3 H N N 221 LYS HD2 H N N 222 LYS HD3 H N N 223 LYS HE2 H N N 224 LYS HE3 H N N 225 LYS HZ1 H N N 226 LYS HZ2 H N N 227 LYS HZ3 H N N 228 LYS HXT H N N 229 MSE N N N N 230 MSE CA C N S 231 MSE C C N N 232 MSE O O N N 233 MSE OXT O N N 234 MSE CB C N N 235 MSE CG C N N 236 MSE SE SE N N 237 MSE CE C N N 238 MSE H H N N 239 MSE H2 H N N 240 MSE HA H N N 241 MSE HXT H N N 242 MSE HB2 H N N 243 MSE HB3 H N N 244 MSE HG2 H N N 245 MSE HG3 H N N 246 MSE HE1 H N N 247 MSE HE2 H N N 248 MSE HE3 H N N 249 PHE N N N N 250 PHE CA C N S 251 PHE C C N N 252 PHE O O N N 253 PHE CB C N N 254 PHE CG C Y N 255 PHE CD1 C Y N 256 PHE CD2 C Y N 257 PHE CE1 C Y N 258 PHE CE2 C Y N 259 PHE CZ C Y N 260 PHE OXT O N N 261 PHE H H N N 262 PHE H2 H N N 263 PHE HA H N N 264 PHE HB2 H N N 265 PHE HB3 H N N 266 PHE HD1 H N N 267 PHE HD2 H N N 268 PHE HE1 H N N 269 PHE HE2 H N N 270 PHE HZ H N N 271 PHE HXT H N N 272 PRO N N N N 273 PRO CA C N S 274 PRO C C N N 275 PRO O O N N 276 PRO CB C N N 277 PRO CG C N N 278 PRO CD C N N 279 PRO OXT O N N 280 PRO H H N N 281 PRO HA H N N 282 PRO HB2 H N N 283 PRO HB3 H N N 284 PRO HG2 H N N 285 PRO HG3 H N N 286 PRO HD2 H N N 287 PRO HD3 H N N 288 PRO HXT H N N 289 SER N N N N 290 SER CA C N S 291 SER C C N N 292 SER O O N N 293 SER CB C N N 294 SER OG O N N 295 SER OXT O N N 296 SER H H N N 297 SER H2 H N N 298 SER HA H N N 299 SER HB2 H N N 300 SER HB3 H N N 301 SER HG H N N 302 SER HXT H N N 303 SO4 S S N N 304 SO4 O1 O N N 305 SO4 O2 O N N 306 SO4 O3 O N N 307 SO4 O4 O N N 308 THR N N N N 309 THR CA C N S 310 THR C C N N 311 THR O O N N 312 THR CB C N R 313 THR OG1 O N N 314 THR CG2 C N N 315 THR OXT O N N 316 THR H H N N 317 THR H2 H N N 318 THR HA H N N 319 THR HB H N N 320 THR HG1 H N N 321 THR HG21 H N N 322 THR HG22 H N N 323 THR HG23 H N N 324 THR HXT H N N 325 TYR N N N N 326 TYR CA C N S 327 TYR C C N N 328 TYR O O N N 329 TYR CB C N N 330 TYR CG C Y N 331 TYR CD1 C Y N 332 TYR CD2 C Y N 333 TYR CE1 C Y N 334 TYR CE2 C Y N 335 TYR CZ C Y N 336 TYR OH O N N 337 TYR OXT O N N 338 TYR H H N N 339 TYR H2 H N N 340 TYR HA H N N 341 TYR HB2 H N N 342 TYR HB3 H N N 343 TYR HD1 H N N 344 TYR HD2 H N N 345 TYR HE1 H N N 346 TYR HE2 H N N 347 TYR HH H N N 348 TYR HXT H N N 349 VAL N N N N 350 VAL CA C N S 351 VAL C C N N 352 VAL O O N N 353 VAL CB C N N 354 VAL CG1 C N N 355 VAL CG2 C N N 356 VAL OXT O N N 357 VAL H H N N 358 VAL H2 H N N 359 VAL HA H N N 360 VAL HB H N N 361 VAL HG11 H N N 362 VAL HG12 H N N 363 VAL HG13 H N N 364 VAL HG21 H N N 365 VAL HG22 H N N 366 VAL HG23 H N N 367 VAL HXT H N N 368 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 GLN N CA sing N N 70 GLN N H sing N N 71 GLN N H2 sing N N 72 GLN CA C sing N N 73 GLN CA CB sing N N 74 GLN CA HA sing N N 75 GLN C O doub N N 76 GLN C OXT sing N N 77 GLN CB CG sing N N 78 GLN CB HB2 sing N N 79 GLN CB HB3 sing N N 80 GLN CG CD sing N N 81 GLN CG HG2 sing N N 82 GLN CG HG3 sing N N 83 GLN CD OE1 doub N N 84 GLN CD NE2 sing N N 85 GLN NE2 HE21 sing N N 86 GLN NE2 HE22 sing N N 87 GLN OXT HXT sing N N 88 GLU N CA sing N N 89 GLU N H sing N N 90 GLU N H2 sing N N 91 GLU CA C sing N N 92 GLU CA CB sing N N 93 GLU CA HA sing N N 94 GLU C O doub N N 95 GLU C OXT sing N N 96 GLU CB CG sing N N 97 GLU CB HB2 sing N N 98 GLU CB HB3 sing N N 99 GLU CG CD sing N N 100 GLU CG HG2 sing N N 101 GLU CG HG3 sing N N 102 GLU CD OE1 doub N N 103 GLU CD OE2 sing N N 104 GLU OE2 HE2 sing N N 105 GLU OXT HXT sing N N 106 GLY N CA sing N N 107 GLY N H sing N N 108 GLY N H2 sing N N 109 GLY CA C sing N N 110 GLY CA HA2 sing N N 111 GLY CA HA3 sing N N 112 GLY C O doub N N 113 GLY C OXT sing N N 114 GLY OXT HXT sing N N 115 GOL C1 O1 sing N N 116 GOL C1 C2 sing N N 117 GOL C1 H11 sing N N 118 GOL C1 H12 sing N N 119 GOL O1 HO1 sing N N 120 GOL C2 O2 sing N N 121 GOL C2 C3 sing N N 122 GOL C2 H2 sing N N 123 GOL O2 HO2 sing N N 124 GOL C3 O3 sing N N 125 GOL C3 H31 sing N N 126 GOL C3 H32 sing N N 127 GOL O3 HO3 sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 HOH O H1 sing N N 150 HOH O H2 sing N N 151 ILE N CA sing N N 152 ILE N H sing N N 153 ILE N H2 sing N N 154 ILE CA C sing N N 155 ILE CA CB sing N N 156 ILE CA HA sing N N 157 ILE C O doub N N 158 ILE C OXT sing N N 159 ILE CB CG1 sing N N 160 ILE CB CG2 sing N N 161 ILE CB HB sing N N 162 ILE CG1 CD1 sing N N 163 ILE CG1 HG12 sing N N 164 ILE CG1 HG13 sing N N 165 ILE CG2 HG21 sing N N 166 ILE CG2 HG22 sing N N 167 ILE CG2 HG23 sing N N 168 ILE CD1 HD11 sing N N 169 ILE CD1 HD12 sing N N 170 ILE CD1 HD13 sing N N 171 ILE OXT HXT sing N N 172 LEU N CA sing N N 173 LEU N H sing N N 174 LEU N H2 sing N N 175 LEU CA C sing N N 176 LEU CA CB sing N N 177 LEU CA HA sing N N 178 LEU C O doub N N 179 LEU C OXT sing N N 180 LEU CB CG sing N N 181 LEU CB HB2 sing N N 182 LEU CB HB3 sing N N 183 LEU CG CD1 sing N N 184 LEU CG CD2 sing N N 185 LEU CG HG sing N N 186 LEU CD1 HD11 sing N N 187 LEU CD1 HD12 sing N N 188 LEU CD1 HD13 sing N N 189 LEU CD2 HD21 sing N N 190 LEU CD2 HD22 sing N N 191 LEU CD2 HD23 sing N N 192 LEU OXT HXT sing N N 193 LYS N CA sing N N 194 LYS N H sing N N 195 LYS N H2 sing N N 196 LYS CA C sing N N 197 LYS CA CB sing N N 198 LYS CA HA sing N N 199 LYS C O doub N N 200 LYS C OXT sing N N 201 LYS CB CG sing N N 202 LYS CB HB2 sing N N 203 LYS CB HB3 sing N N 204 LYS CG CD sing N N 205 LYS CG HG2 sing N N 206 LYS CG HG3 sing N N 207 LYS CD CE sing N N 208 LYS CD HD2 sing N N 209 LYS CD HD3 sing N N 210 LYS CE NZ sing N N 211 LYS CE HE2 sing N N 212 LYS CE HE3 sing N N 213 LYS NZ HZ1 sing N N 214 LYS NZ HZ2 sing N N 215 LYS NZ HZ3 sing N N 216 LYS OXT HXT sing N N 217 MSE N CA sing N N 218 MSE N H sing N N 219 MSE N H2 sing N N 220 MSE CA C sing N N 221 MSE CA CB sing N N 222 MSE CA HA sing N N 223 MSE C O doub N N 224 MSE C OXT sing N N 225 MSE OXT HXT sing N N 226 MSE CB CG sing N N 227 MSE CB HB2 sing N N 228 MSE CB HB3 sing N N 229 MSE CG SE sing N N 230 MSE CG HG2 sing N N 231 MSE CG HG3 sing N N 232 MSE SE CE sing N N 233 MSE CE HE1 sing N N 234 MSE CE HE2 sing N N 235 MSE CE HE3 sing N N 236 PHE N CA sing N N 237 PHE N H sing N N 238 PHE N H2 sing N N 239 PHE CA C sing N N 240 PHE CA CB sing N N 241 PHE CA HA sing N N 242 PHE C O doub N N 243 PHE C OXT sing N N 244 PHE CB CG sing N N 245 PHE CB HB2 sing N N 246 PHE CB HB3 sing N N 247 PHE CG CD1 doub Y N 248 PHE CG CD2 sing Y N 249 PHE CD1 CE1 sing Y N 250 PHE CD1 HD1 sing N N 251 PHE CD2 CE2 doub Y N 252 PHE CD2 HD2 sing N N 253 PHE CE1 CZ doub Y N 254 PHE CE1 HE1 sing N N 255 PHE CE2 CZ sing Y N 256 PHE CE2 HE2 sing N N 257 PHE CZ HZ sing N N 258 PHE OXT HXT sing N N 259 PRO N CA sing N N 260 PRO N CD sing N N 261 PRO N H sing N N 262 PRO CA C sing N N 263 PRO CA CB sing N N 264 PRO CA HA sing N N 265 PRO C O doub N N 266 PRO C OXT sing N N 267 PRO CB CG sing N N 268 PRO CB HB2 sing N N 269 PRO CB HB3 sing N N 270 PRO CG CD sing N N 271 PRO CG HG2 sing N N 272 PRO CG HG3 sing N N 273 PRO CD HD2 sing N N 274 PRO CD HD3 sing N N 275 PRO OXT HXT sing N N 276 SER N CA sing N N 277 SER N H sing N N 278 SER N H2 sing N N 279 SER CA C sing N N 280 SER CA CB sing N N 281 SER CA HA sing N N 282 SER C O doub N N 283 SER C OXT sing N N 284 SER CB OG sing N N 285 SER CB HB2 sing N N 286 SER CB HB3 sing N N 287 SER OG HG sing N N 288 SER OXT HXT sing N N 289 SO4 S O1 doub N N 290 SO4 S O2 doub N N 291 SO4 S O3 sing N N 292 SO4 S O4 sing N N 293 THR N CA sing N N 294 THR N H sing N N 295 THR N H2 sing N N 296 THR CA C sing N N 297 THR CA CB sing N N 298 THR CA HA sing N N 299 THR C O doub N N 300 THR C OXT sing N N 301 THR CB OG1 sing N N 302 THR CB CG2 sing N N 303 THR CB HB sing N N 304 THR OG1 HG1 sing N N 305 THR CG2 HG21 sing N N 306 THR CG2 HG22 sing N N 307 THR CG2 HG23 sing N N 308 THR OXT HXT sing N N 309 TYR N CA sing N N 310 TYR N H sing N N 311 TYR N H2 sing N N 312 TYR CA C sing N N 313 TYR CA CB sing N N 314 TYR CA HA sing N N 315 TYR C O doub N N 316 TYR C OXT sing N N 317 TYR CB CG sing N N 318 TYR CB HB2 sing N N 319 TYR CB HB3 sing N N 320 TYR CG CD1 doub Y N 321 TYR CG CD2 sing Y N 322 TYR CD1 CE1 sing Y N 323 TYR CD1 HD1 sing N N 324 TYR CD2 CE2 doub Y N 325 TYR CD2 HD2 sing N N 326 TYR CE1 CZ doub Y N 327 TYR CE1 HE1 sing N N 328 TYR CE2 CZ sing Y N 329 TYR CE2 HE2 sing N N 330 TYR CZ OH sing N N 331 TYR OH HH sing N N 332 TYR OXT HXT sing N N 333 VAL N CA sing N N 334 VAL N H sing N N 335 VAL N H2 sing N N 336 VAL CA C sing N N 337 VAL CA CB sing N N 338 VAL CA HA sing N N 339 VAL C O doub N N 340 VAL C OXT sing N N 341 VAL CB CG1 sing N N 342 VAL CB CG2 sing N N 343 VAL CB HB sing N N 344 VAL CG1 HG11 sing N N 345 VAL CG1 HG12 sing N N 346 VAL CG1 HG13 sing N N 347 VAL CG2 HG21 sing N N 348 VAL CG2 HG22 sing N N 349 VAL CG2 HG23 sing N N 350 VAL OXT HXT sing N N 351 # _atom_sites.entry_id 4HAM _atom_sites.fract_transf_matrix[1][1] 0.026938 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.010852 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.010870 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_