data_4HBX # _entry.id 4HBX # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4HBX RCSB RCSB075273 WWPDB D_1000075273 # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4HBY . unspecified PDB 4HBW . unspecified PDB 4HBV . unspecified # _pdbx_database_status.entry_id 4HBX _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-09-28 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Filippakopoulos, P.' 1 'Picaud, S.' 2 'Qi, J.' 3 'Felletar, I.' 4 'von Delft, F.' 5 'Bountra, C.' 6 'Arrowsmith, C.H.' 7 'Edwards, A.' 8 'Fish, P.V.' 9 'Bunnage, M.E.' 10 'Cook, A.S.' 11 'Owen, D.R.' 12 'Knapp, S.' 13 'Structural Genomics Consortium (SGC)' 14 # _citation.id primary _citation.title ;Identification of a Chemical Probe for Bromo and Extra C-Terminal Bromodomain Inhibition through Optimization of a Fragment-Derived Hit. ; _citation.journal_abbrev J.Med.Chem. _citation.journal_volume 55 _citation.page_first 9831 _citation.page_last 9837 _citation.year 2012 _citation.journal_id_ASTM JMCMAR _citation.country US _citation.journal_id_ISSN 0022-2623 _citation.journal_id_CSD 0151 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23095041 _citation.pdbx_database_id_DOI 10.1021/jm3010515 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Fish, P.V.' 1 primary 'Filippakopoulos, P.' 2 primary 'Bish, G.' 3 primary 'Brennan, P.E.' 4 primary 'Bunnage, M.E.' 5 primary 'Cook, A.S.' 6 primary 'Federov, O.' 7 primary 'Gerstenberger, B.S.' 8 primary 'Jones, H.' 9 primary 'Knapp, S.' 10 primary 'Marsden, B.' 11 primary 'Nocka, K.' 12 primary 'Owen, D.R.' 13 primary 'Philpott, M.' 14 primary 'Picaud, S.' 15 primary 'Primiano, M.J.' 16 primary 'Ralph, M.J.' 17 primary 'Sciammetta, N.' 18 primary 'Trzupek, J.D.' 19 # _cell.length_a 43.480 _cell.length_b 48.370 _cell.length_c 61.030 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4HBX _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.entry_id 4HBX _symmetry.Int_Tables_number 19 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Bromodomain-containing protein 4' 15099.380 1 ? ? ? ? 2 non-polymer syn '3-methyl-6-(pyrrolidin-1-ylsulfonyl)-3,4-dihydroquinazolin-2(1H)-one' 295.357 1 ? ? ? ? 3 water nat water 18.015 157 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Protein HUNK1' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_seq_one_letter_code_can ;SMNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 MET n 1 3 ASN n 1 4 PRO n 1 5 PRO n 1 6 PRO n 1 7 PRO n 1 8 GLU n 1 9 THR n 1 10 SER n 1 11 ASN n 1 12 PRO n 1 13 ASN n 1 14 LYS n 1 15 PRO n 1 16 LYS n 1 17 ARG n 1 18 GLN n 1 19 THR n 1 20 ASN n 1 21 GLN n 1 22 LEU n 1 23 GLN n 1 24 TYR n 1 25 LEU n 1 26 LEU n 1 27 ARG n 1 28 VAL n 1 29 VAL n 1 30 LEU n 1 31 LYS n 1 32 THR n 1 33 LEU n 1 34 TRP n 1 35 LYS n 1 36 HIS n 1 37 GLN n 1 38 PHE n 1 39 ALA n 1 40 TRP n 1 41 PRO n 1 42 PHE n 1 43 GLN n 1 44 GLN n 1 45 PRO n 1 46 VAL n 1 47 ASP n 1 48 ALA n 1 49 VAL n 1 50 LYS n 1 51 LEU n 1 52 ASN n 1 53 LEU n 1 54 PRO n 1 55 ASP n 1 56 TYR n 1 57 TYR n 1 58 LYS n 1 59 ILE n 1 60 ILE n 1 61 LYS n 1 62 THR n 1 63 PRO n 1 64 MET n 1 65 ASP n 1 66 MET n 1 67 GLY n 1 68 THR n 1 69 ILE n 1 70 LYS n 1 71 LYS n 1 72 ARG n 1 73 LEU n 1 74 GLU n 1 75 ASN n 1 76 ASN n 1 77 TYR n 1 78 TYR n 1 79 TRP n 1 80 ASN n 1 81 ALA n 1 82 GLN n 1 83 GLU n 1 84 CYS n 1 85 ILE n 1 86 GLN n 1 87 ASP n 1 88 PHE n 1 89 ASN n 1 90 THR n 1 91 MET n 1 92 PHE n 1 93 THR n 1 94 ASN n 1 95 CYS n 1 96 TYR n 1 97 ILE n 1 98 TYR n 1 99 ASN n 1 100 LYS n 1 101 PRO n 1 102 GLY n 1 103 ASP n 1 104 ASP n 1 105 ILE n 1 106 VAL n 1 107 LEU n 1 108 MET n 1 109 ALA n 1 110 GLU n 1 111 ALA n 1 112 LEU n 1 113 GLU n 1 114 LYS n 1 115 LEU n 1 116 PHE n 1 117 LEU n 1 118 GLN n 1 119 LYS n 1 120 ILE n 1 121 ASN n 1 122 GLU n 1 123 LEU n 1 124 PRO n 1 125 THR n 1 126 GLU n 1 127 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BRD4, HUNK1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)-R3' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28-Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BRD4_HUMAN _struct_ref.pdbx_db_accession O60885 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;STNPPPPETSNPNKPKRQTNQLQYLLRVVLKTLWKHQFAWPFQQPVDAVKLNLPDYYKIIKTPMDMGTIKKRLENNYYWN AQECIQDFNTMFTNCYIYNKPGDDIVLMAEALEKLFLQKINELPTEE ; _struct_ref.pdbx_align_begin 42 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4HBX _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 1 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 127 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession O60885 _struct_ref_seq.db_align_beg 42 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 168 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 42 _struct_ref_seq.pdbx_auth_seq_align_end 168 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4HBX _struct_ref_seq_dif.mon_id MET _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 2 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code O60885 _struct_ref_seq_dif.db_mon_id THR _struct_ref_seq_dif.pdbx_seq_db_seq_num 43 _struct_ref_seq_dif.details CONFLICT _struct_ref_seq_dif.pdbx_auth_seq_num 43 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight 14X non-polymer . '3-methyl-6-(pyrrolidin-1-ylsulfonyl)-3,4-dihydroquinazolin-2(1H)-one' ? 'C13 H17 N3 O3 S' 295.357 ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4HBX _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.13 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 42.12 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '0.2M KSCN, 0.1M BTProp pH 7.5, 20% PEG3350, 10% EtGly, VAPOR DIFFUSION, SITTING DROP, temperature 277K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector 'IMAGE PLATE' _diffrn_detector.type 'RIGAKU RAXIS IV' _diffrn_detector.pdbx_collection_date 2012-02-10 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.5418 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source 'ROTATING ANODE' _diffrn_source.type 'RIGAKU FR-E SUPERBRIGHT' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.5418 _diffrn_source.pdbx_synchrotron_site ? _diffrn_source.pdbx_synchrotron_beamline ? # _reflns.entry_id 4HBX _reflns.d_resolution_high 1.620 _reflns.d_resolution_low 37.91 _reflns.number_all 16968 _reflns.number_obs 16951 _reflns.pdbx_netI_over_sigmaI 11.600 _reflns.pdbx_Rsym_value 0.068 _reflns.pdbx_redundancy 4.400 _reflns.percent_possible_obs 99.900 _reflns.observed_criterion_sigma_F ? _reflns.observed_criterion_sigma_I ? _reflns.pdbx_Rmerge_I_obs 0.068 _reflns.B_iso_Wilson_estimate 20.6 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 1.620 1.710 ? 9358 ? 0.572 1.300 0.572 ? 3.900 ? 2415 99.800 1 1 1.710 1.810 ? 10139 ? 0.377 2.000 0.377 ? 4.400 ? 2309 100.000 2 1 1.810 1.940 ? 9643 ? 0.232 3.200 0.232 ? 4.500 ? 2163 100.000 3 1 1.940 2.090 ? 9113 ? 0.143 5.000 0.143 ? 4.500 ? 2028 100.000 4 1 2.090 2.290 ? 8498 ? 0.102 6.800 0.102 ? 4.500 ? 1879 100.000 5 1 2.290 2.560 ? 7808 ? 0.083 8.300 0.083 ? 4.600 ? 1706 100.000 6 1 2.560 2.960 ? 6855 ? 0.058 11.700 0.058 ? 4.500 ? 1508 100.000 7 1 2.960 3.620 ? 5810 ? 0.043 14.300 0.043 ? 4.400 ? 1309 100.000 8 1 3.620 5.120 ? 4372 ? 0.030 19.000 0.030 ? 4.300 ? 1028 99.900 9 1 5.120 24.978 ? 2404 ? 0.038 5.500 0.038 ? 4.000 ? 606 98.600 10 1 # _refine.entry_id 4HBX _refine.ls_d_res_high 1.6200 _refine.ls_d_res_low 37.9100 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 99.8000 _refine.ls_number_reflns_obs 16895 _refine.ls_number_reflns_all 16929 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ;HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS U VALUES: WITH TLS ADDED ; _refine.ls_R_factor_all 0.1791 _refine.ls_R_factor_obs 0.1791 _refine.ls_R_factor_R_work 0.1775 _refine.ls_wR_factor_R_work 0.1662 _refine.ls_R_factor_R_free 0.2096 _refine.ls_wR_factor_R_free 0.2007 _refine.ls_percent_reflns_R_free 5.1000 _refine.ls_number_reflns_R_free 854 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 21.9613 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.3400 _refine.aniso_B[2][2] 0.2200 _refine.aniso_B[3][3] -0.5600 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9630 _refine.correlation_coeff_Fo_to_Fc_free 0.9550 _refine.overall_SU_R_Cruickshank_DPI 0.0993 _refine.overall_SU_R_free 0.0971 _refine.pdbx_overall_ESU_R 0.0990 _refine.pdbx_overall_ESU_R_Free 0.0970 _refine.overall_SU_ML 0.0590 _refine.overall_SU_B 3.2210 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.2000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model 2OSS _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8822 _refine.B_iso_max 121.500 _refine.B_iso_min 7.340 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.500 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1061 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 20 _refine_hist.number_atoms_solvent 157 _refine_hist.number_atoms_total 1238 _refine_hist.d_res_high 1.6200 _refine_hist.d_res_low 37.9100 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1144 0.015 0.020 ? ? 'X-RAY DIFFRACTION' r_bond_other_d 795 0.001 0.020 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1566 1.594 1.995 ? ? 'X-RAY DIFFRACTION' r_angle_other_deg 1966 0.981 3.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 136 5.570 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 55 33.730 26.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 209 13.517 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 3 19.923 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 165 0.095 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1279 0.009 0.021 ? ? 'X-RAY DIFFRACTION' r_gen_planes_other 208 0.001 0.020 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.6200 _refine_ls_shell.d_res_low 1.6620 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 99.3800 _refine_ls_shell.number_reflns_R_work 1061 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.4880 _refine_ls_shell.R_factor_R_free 0.5310 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 53 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1114 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4HBX _struct.title 'Crystal Structure of the first bromodomain of human BRD4 in complex with a quinazolin ligand' _struct.pdbx_descriptor 'Bromodomain-containing protein 4' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4HBX _struct_keywords.pdbx_keywords 'PROTEIN BINDING/INHIBITOR' _struct_keywords.text ;BROMODOMAIN, CAP, HUNK1, MCAP, PROTEIN BINDING-INHIBITOR COMPLEX, MITOTIC CHROMOSOME ASSOCIATED PROTEIN, CELL CYCLE, STRUCTURAL GENOMICS CONSORTIUM, SGC ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 19 ? VAL A 28 ? THR A 60 VAL A 69 1 ? 10 HELX_P HELX_P2 2 VAL A 28 ? HIS A 36 ? VAL A 69 HIS A 77 1 ? 9 HELX_P HELX_P3 3 ALA A 39 ? GLN A 43 ? ALA A 80 GLN A 84 5 ? 5 HELX_P HELX_P4 4 ASP A 55 ? ILE A 60 ? ASP A 96 ILE A 101 1 ? 6 HELX_P HELX_P5 5 ASP A 65 ? ASN A 75 ? ASP A 106 ASN A 116 1 ? 11 HELX_P HELX_P6 6 ASN A 80 ? ASN A 99 ? ASN A 121 ASN A 140 1 ? 20 HELX_P HELX_P7 7 ASP A 103 ? ASN A 121 ? ASP A 144 ASN A 162 1 ? 19 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id ? _struct_site.pdbx_auth_comp_id ? _struct_site.pdbx_auth_seq_id ? _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 11 _struct_site.details 'BINDING SITE FOR RESIDUE 14X A 201' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 11 SER A 10 ? SER A 51 . ? 2_755 ? 2 AC1 11 LYS A 16 ? LYS A 57 . ? 2_755 ? 3 AC1 11 TRP A 40 ? TRP A 81 . ? 1_555 ? 4 AC1 11 PRO A 41 ? PRO A 82 . ? 1_555 ? 5 AC1 11 VAL A 46 ? VAL A 87 . ? 1_555 ? 6 AC1 11 LEU A 51 ? LEU A 92 . ? 1_555 ? 7 AC1 11 ASN A 75 ? ASN A 116 . ? 2_755 ? 8 AC1 11 ASN A 99 ? ASN A 140 . ? 1_555 ? 9 AC1 11 MET A 108 ? MET A 149 . ? 1_555 ? 10 AC1 11 HOH C . ? HOH A 301 . ? 1_555 ? 11 AC1 11 HOH C . ? HOH A 347 . ? 1_555 ? # _atom_sites.entry_id 4HBX _atom_sites.fract_transf_matrix[1][1] 0.022999 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020674 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016385 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 42 42 SER SER A . n A 1 2 MET 2 43 43 MET MET A . n A 1 3 ASN 3 44 44 ASN ASN A . n A 1 4 PRO 4 45 45 PRO PRO A . n A 1 5 PRO 5 46 46 PRO PRO A . n A 1 6 PRO 6 47 47 PRO PRO A . n A 1 7 PRO 7 48 48 PRO PRO A . n A 1 8 GLU 8 49 49 GLU GLU A . n A 1 9 THR 9 50 50 THR THR A . n A 1 10 SER 10 51 51 SER SER A . n A 1 11 ASN 11 52 52 ASN ASN A . n A 1 12 PRO 12 53 53 PRO PRO A . n A 1 13 ASN 13 54 54 ASN ASN A . n A 1 14 LYS 14 55 55 LYS LYS A . n A 1 15 PRO 15 56 56 PRO PRO A . n A 1 16 LYS 16 57 57 LYS LYS A . n A 1 17 ARG 17 58 58 ARG ARG A . n A 1 18 GLN 18 59 59 GLN GLN A . n A 1 19 THR 19 60 60 THR THR A . n A 1 20 ASN 20 61 61 ASN ASN A . n A 1 21 GLN 21 62 62 GLN GLN A . n A 1 22 LEU 22 63 63 LEU LEU A . n A 1 23 GLN 23 64 64 GLN GLN A . n A 1 24 TYR 24 65 65 TYR TYR A . n A 1 25 LEU 25 66 66 LEU LEU A . n A 1 26 LEU 26 67 67 LEU LEU A . n A 1 27 ARG 27 68 68 ARG ARG A . n A 1 28 VAL 28 69 69 VAL VAL A . n A 1 29 VAL 29 70 70 VAL VAL A . n A 1 30 LEU 30 71 71 LEU LEU A . n A 1 31 LYS 31 72 72 LYS LYS A . n A 1 32 THR 32 73 73 THR THR A . n A 1 33 LEU 33 74 74 LEU LEU A . n A 1 34 TRP 34 75 75 TRP TRP A . n A 1 35 LYS 35 76 76 LYS LYS A . n A 1 36 HIS 36 77 77 HIS HIS A . n A 1 37 GLN 37 78 78 GLN GLN A . n A 1 38 PHE 38 79 79 PHE PHE A . n A 1 39 ALA 39 80 80 ALA ALA A . n A 1 40 TRP 40 81 81 TRP TRP A . n A 1 41 PRO 41 82 82 PRO PRO A . n A 1 42 PHE 42 83 83 PHE PHE A . n A 1 43 GLN 43 84 84 GLN GLN A . n A 1 44 GLN 44 85 85 GLN GLN A . n A 1 45 PRO 45 86 86 PRO PRO A . n A 1 46 VAL 46 87 87 VAL VAL A . n A 1 47 ASP 47 88 88 ASP ASP A . n A 1 48 ALA 48 89 89 ALA ALA A . n A 1 49 VAL 49 90 90 VAL VAL A . n A 1 50 LYS 50 91 91 LYS LYS A . n A 1 51 LEU 51 92 92 LEU LEU A . n A 1 52 ASN 52 93 93 ASN ASN A . n A 1 53 LEU 53 94 94 LEU LEU A . n A 1 54 PRO 54 95 95 PRO PRO A . n A 1 55 ASP 55 96 96 ASP ASP A . n A 1 56 TYR 56 97 97 TYR TYR A . n A 1 57 TYR 57 98 98 TYR TYR A . n A 1 58 LYS 58 99 99 LYS LYS A . n A 1 59 ILE 59 100 100 ILE ILE A . n A 1 60 ILE 60 101 101 ILE ILE A . n A 1 61 LYS 61 102 102 LYS LYS A . n A 1 62 THR 62 103 103 THR THR A . n A 1 63 PRO 63 104 104 PRO PRO A . n A 1 64 MET 64 105 105 MET MET A . n A 1 65 ASP 65 106 106 ASP ASP A . n A 1 66 MET 66 107 107 MET MET A . n A 1 67 GLY 67 108 108 GLY GLY A . n A 1 68 THR 68 109 109 THR THR A . n A 1 69 ILE 69 110 110 ILE ILE A . n A 1 70 LYS 70 111 111 LYS LYS A . n A 1 71 LYS 71 112 112 LYS LYS A . n A 1 72 ARG 72 113 113 ARG ARG A . n A 1 73 LEU 73 114 114 LEU LEU A . n A 1 74 GLU 74 115 115 GLU GLU A . n A 1 75 ASN 75 116 116 ASN ASN A . n A 1 76 ASN 76 117 117 ASN ASN A . n A 1 77 TYR 77 118 118 TYR TYR A . n A 1 78 TYR 78 119 119 TYR TYR A . n A 1 79 TRP 79 120 120 TRP TRP A . n A 1 80 ASN 80 121 121 ASN ASN A . n A 1 81 ALA 81 122 122 ALA ALA A . n A 1 82 GLN 82 123 123 GLN GLN A . n A 1 83 GLU 83 124 124 GLU GLU A . n A 1 84 CYS 84 125 125 CYS CYS A . n A 1 85 ILE 85 126 126 ILE ILE A . n A 1 86 GLN 86 127 127 GLN GLN A . n A 1 87 ASP 87 128 128 ASP ASP A . n A 1 88 PHE 88 129 129 PHE PHE A . n A 1 89 ASN 89 130 130 ASN ASN A . n A 1 90 THR 90 131 131 THR THR A . n A 1 91 MET 91 132 132 MET MET A . n A 1 92 PHE 92 133 133 PHE PHE A . n A 1 93 THR 93 134 134 THR THR A . n A 1 94 ASN 94 135 135 ASN ASN A . n A 1 95 CYS 95 136 136 CYS CYS A . n A 1 96 TYR 96 137 137 TYR TYR A . n A 1 97 ILE 97 138 138 ILE ILE A . n A 1 98 TYR 98 139 139 TYR TYR A . n A 1 99 ASN 99 140 140 ASN ASN A . n A 1 100 LYS 100 141 141 LYS LYS A . n A 1 101 PRO 101 142 142 PRO PRO A . n A 1 102 GLY 102 143 143 GLY GLY A . n A 1 103 ASP 103 144 144 ASP ASP A . n A 1 104 ASP 104 145 145 ASP ASP A . n A 1 105 ILE 105 146 146 ILE ILE A . n A 1 106 VAL 106 147 147 VAL VAL A . n A 1 107 LEU 107 148 148 LEU LEU A . n A 1 108 MET 108 149 149 MET MET A . n A 1 109 ALA 109 150 150 ALA ALA A . n A 1 110 GLU 110 151 151 GLU GLU A . n A 1 111 ALA 111 152 152 ALA ALA A . n A 1 112 LEU 112 153 153 LEU LEU A . n A 1 113 GLU 113 154 154 GLU GLU A . n A 1 114 LYS 114 155 155 LYS LYS A . n A 1 115 LEU 115 156 156 LEU LEU A . n A 1 116 PHE 116 157 157 PHE PHE A . n A 1 117 LEU 117 158 158 LEU LEU A . n A 1 118 GLN 118 159 159 GLN GLN A . n A 1 119 LYS 119 160 160 LYS LYS A . n A 1 120 ILE 120 161 161 ILE ILE A . n A 1 121 ASN 121 162 162 ASN ASN A . n A 1 122 GLU 122 163 163 GLU GLU A . n A 1 123 LEU 123 164 164 LEU LEU A . n A 1 124 PRO 124 165 165 PRO PRO A . n A 1 125 THR 125 166 166 THR THR A . n A 1 126 GLU 126 167 167 GLU GLU A . n A 1 127 GLU 127 168 168 GLU GLU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name ? _pdbx_SG_project.full_name_of_center 'Structural Genomics Consortium' _pdbx_SG_project.initial_of_center SGC # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-10-31 2 'Structure model' 1 1 2012-11-14 3 'Structure model' 1 2 2012-12-12 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 1.620 _diffrn_reflns.pdbx_d_res_low 24.978 _diffrn_reflns.pdbx_number_obs 16951 _diffrn_reflns.pdbx_Rmerge_I_obs ? _diffrn_reflns.pdbx_Rsym_value 0.068 _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI 6.60 _diffrn_reflns.pdbx_redundancy 4.40 _diffrn_reflns.pdbx_percent_possible_obs 99.90 _diffrn_reflns.number 74000 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 5.12 24.98 ? ? 0.038 0.038 ? 4.00 98.60 1 3.62 5.12 ? ? 0.030 0.030 ? 4.30 99.90 1 2.96 3.62 ? ? 0.043 0.043 ? 4.40 100.00 1 2.56 2.96 ? ? 0.058 0.058 ? 4.50 100.00 1 2.29 2.56 ? ? 0.083 0.083 ? 4.60 100.00 1 2.09 2.29 ? ? 0.102 0.102 ? 4.50 100.00 1 1.94 2.09 ? ? 0.143 0.143 ? 4.50 100.00 1 1.81 1.94 ? ? 0.232 0.232 ? 4.50 100.00 1 1.71 1.81 ? ? 0.377 0.377 ? 4.40 100.00 1 1.62 1.71 ? ? 0.572 0.572 ? 3.90 99.80 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 60.9189 _pdbx_refine_tls.origin_y 4.8122 _pdbx_refine_tls.origin_z 10.4196 _pdbx_refine_tls.T[1][1] 0.0639 _pdbx_refine_tls.T[2][2] 0.0475 _pdbx_refine_tls.T[3][3] 0.0504 _pdbx_refine_tls.T[1][2] 0.0051 _pdbx_refine_tls.T[1][3] -0.0053 _pdbx_refine_tls.T[2][3] 0.0137 _pdbx_refine_tls.L[1][1] 0.2742 _pdbx_refine_tls.L[2][2] 0.4396 _pdbx_refine_tls.L[3][3] 0.8499 _pdbx_refine_tls.L[1][2] 0.0355 _pdbx_refine_tls.L[1][3] -0.2612 _pdbx_refine_tls.L[2][3] -0.5357 _pdbx_refine_tls.S[1][1] -0.0499 _pdbx_refine_tls.S[2][2] -0.0216 _pdbx_refine_tls.S[3][3] 0.0715 _pdbx_refine_tls.S[1][2] -0.0092 _pdbx_refine_tls.S[1][3] -0.0228 _pdbx_refine_tls.S[2][3] -0.0214 _pdbx_refine_tls.S[2][1] 0.0444 _pdbx_refine_tls.S[3][1] -0.0221 _pdbx_refine_tls.S[3][2] 0.0525 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 42 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 168 _pdbx_refine_tls_group.selection_details ? _pdbx_refine_tls_group.beg_label_asym_id . _pdbx_refine_tls_group.beg_label_seq_id . _pdbx_refine_tls_group.end_label_asym_id . _pdbx_refine_tls_group.end_label_seq_id . _pdbx_refine_tls_group.selection ? # _pdbx_phasing_MR.entry_id 4HBX _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 2.500 _pdbx_phasing_MR.d_res_low_rotation 24.980 _pdbx_phasing_MR.d_res_high_translation 2.500 _pdbx_phasing_MR.d_res_low_translation 24.980 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 SCALA 3.3.20 2011/05/18 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 2 PHASER 2.3.0 'Sun Jun 26 20:05:17 2011 (svn )' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 CrystalClear . ? ? ? ? 'data collection' ? ? ? 6 MOSFLM . ? ? ? ? 'data reduction' ? ? ? # _pdbx_validate_rmsd_bond.id 1 _pdbx_validate_rmsd_bond.PDB_model_num 1 _pdbx_validate_rmsd_bond.auth_atom_id_1 CE2 _pdbx_validate_rmsd_bond.auth_asym_id_1 A _pdbx_validate_rmsd_bond.auth_comp_id_1 TRP _pdbx_validate_rmsd_bond.auth_seq_id_1 75 _pdbx_validate_rmsd_bond.PDB_ins_code_1 ? _pdbx_validate_rmsd_bond.label_alt_id_1 ? _pdbx_validate_rmsd_bond.auth_atom_id_2 CD2 _pdbx_validate_rmsd_bond.auth_asym_id_2 A _pdbx_validate_rmsd_bond.auth_comp_id_2 TRP _pdbx_validate_rmsd_bond.auth_seq_id_2 75 _pdbx_validate_rmsd_bond.PDB_ins_code_2 ? _pdbx_validate_rmsd_bond.label_alt_id_2 ? _pdbx_validate_rmsd_bond.bond_value 1.487 _pdbx_validate_rmsd_bond.bond_target_value 1.409 _pdbx_validate_rmsd_bond.bond_deviation 0.078 _pdbx_validate_rmsd_bond.bond_standard_deviation 0.012 _pdbx_validate_rmsd_bond.linker_flag N # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 '3-methyl-6-(pyrrolidin-1-ylsulfonyl)-3,4-dihydroquinazolin-2(1H)-one' 14X 3 water HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 14X 1 201 1 14X 14X A . C 3 HOH 1 301 1 HOH HOH A . C 3 HOH 2 302 2 HOH HOH A . C 3 HOH 3 303 3 HOH HOH A . C 3 HOH 4 304 4 HOH HOH A . C 3 HOH 5 305 5 HOH HOH A . C 3 HOH 6 306 6 HOH HOH A . C 3 HOH 7 307 7 HOH HOH A . C 3 HOH 8 308 8 HOH HOH A . C 3 HOH 9 309 9 HOH HOH A . C 3 HOH 10 310 10 HOH HOH A . C 3 HOH 11 311 11 HOH HOH A . C 3 HOH 12 312 12 HOH HOH A . C 3 HOH 13 313 13 HOH HOH A . C 3 HOH 14 314 14 HOH HOH A . C 3 HOH 15 315 15 HOH HOH A . C 3 HOH 16 316 16 HOH HOH A . C 3 HOH 17 317 17 HOH HOH A . C 3 HOH 18 318 19 HOH HOH A . C 3 HOH 19 319 20 HOH HOH A . C 3 HOH 20 320 22 HOH HOH A . C 3 HOH 21 321 23 HOH HOH A . C 3 HOH 22 322 24 HOH HOH A . C 3 HOH 23 323 25 HOH HOH A . C 3 HOH 24 324 26 HOH HOH A . C 3 HOH 25 325 27 HOH HOH A . C 3 HOH 26 326 28 HOH HOH A . C 3 HOH 27 327 29 HOH HOH A . C 3 HOH 28 328 30 HOH HOH A . C 3 HOH 29 329 31 HOH HOH A . C 3 HOH 30 330 32 HOH HOH A . C 3 HOH 31 331 34 HOH HOH A . C 3 HOH 32 332 35 HOH HOH A . C 3 HOH 33 333 36 HOH HOH A . C 3 HOH 34 334 37 HOH HOH A . C 3 HOH 35 335 38 HOH HOH A . C 3 HOH 36 336 39 HOH HOH A . C 3 HOH 37 337 40 HOH HOH A . C 3 HOH 38 338 41 HOH HOH A . C 3 HOH 39 339 42 HOH HOH A . C 3 HOH 40 340 43 HOH HOH A . C 3 HOH 41 341 44 HOH HOH A . C 3 HOH 42 342 45 HOH HOH A . C 3 HOH 43 343 46 HOH HOH A . C 3 HOH 44 344 47 HOH HOH A . C 3 HOH 45 345 49 HOH HOH A . C 3 HOH 46 346 50 HOH HOH A . C 3 HOH 47 347 51 HOH HOH A . C 3 HOH 48 348 54 HOH HOH A . C 3 HOH 49 349 55 HOH HOH A . C 3 HOH 50 350 56 HOH HOH A . C 3 HOH 51 351 57 HOH HOH A . C 3 HOH 52 352 58 HOH HOH A . C 3 HOH 53 353 59 HOH HOH A . C 3 HOH 54 354 60 HOH HOH A . C 3 HOH 55 355 61 HOH HOH A . C 3 HOH 56 356 62 HOH HOH A . C 3 HOH 57 357 65 HOH HOH A . C 3 HOH 58 358 66 HOH HOH A . C 3 HOH 59 359 67 HOH HOH A . C 3 HOH 60 360 68 HOH HOH A . C 3 HOH 61 361 69 HOH HOH A . C 3 HOH 62 362 70 HOH HOH A . C 3 HOH 63 363 71 HOH HOH A . C 3 HOH 64 364 73 HOH HOH A . C 3 HOH 65 365 75 HOH HOH A . C 3 HOH 66 366 76 HOH HOH A . C 3 HOH 67 367 78 HOH HOH A . C 3 HOH 68 368 79 HOH HOH A . C 3 HOH 69 369 80 HOH HOH A . C 3 HOH 70 370 81 HOH HOH A . C 3 HOH 71 371 82 HOH HOH A . C 3 HOH 72 372 83 HOH HOH A . C 3 HOH 73 373 84 HOH HOH A . C 3 HOH 74 374 85 HOH HOH A . C 3 HOH 75 375 86 HOH HOH A . C 3 HOH 76 376 89 HOH HOH A . C 3 HOH 77 377 90 HOH HOH A . C 3 HOH 78 378 91 HOH HOH A . C 3 HOH 79 379 92 HOH HOH A . C 3 HOH 80 380 93 HOH HOH A . C 3 HOH 81 381 95 HOH HOH A . C 3 HOH 82 382 96 HOH HOH A . C 3 HOH 83 383 97 HOH HOH A . C 3 HOH 84 384 98 HOH HOH A . C 3 HOH 85 385 99 HOH HOH A . C 3 HOH 86 386 100 HOH HOH A . C 3 HOH 87 387 101 HOH HOH A . C 3 HOH 88 388 102 HOH HOH A . C 3 HOH 89 389 103 HOH HOH A . C 3 HOH 90 390 104 HOH HOH A . C 3 HOH 91 391 105 HOH HOH A . C 3 HOH 92 392 106 HOH HOH A . C 3 HOH 93 393 107 HOH HOH A . C 3 HOH 94 394 108 HOH HOH A . C 3 HOH 95 395 109 HOH HOH A . C 3 HOH 96 396 110 HOH HOH A . C 3 HOH 97 397 111 HOH HOH A . C 3 HOH 98 398 112 HOH HOH A . C 3 HOH 99 399 113 HOH HOH A . C 3 HOH 100 400 114 HOH HOH A . C 3 HOH 101 401 115 HOH HOH A . C 3 HOH 102 402 116 HOH HOH A . C 3 HOH 103 403 117 HOH HOH A . C 3 HOH 104 404 118 HOH HOH A . C 3 HOH 105 405 119 HOH HOH A . C 3 HOH 106 406 120 HOH HOH A . C 3 HOH 107 407 121 HOH HOH A . C 3 HOH 108 408 122 HOH HOH A . C 3 HOH 109 409 123 HOH HOH A . C 3 HOH 110 410 124 HOH HOH A . C 3 HOH 111 411 125 HOH HOH A . C 3 HOH 112 412 126 HOH HOH A . C 3 HOH 113 413 127 HOH HOH A . C 3 HOH 114 414 128 HOH HOH A . C 3 HOH 115 415 129 HOH HOH A . C 3 HOH 116 416 130 HOH HOH A . C 3 HOH 117 417 131 HOH HOH A . C 3 HOH 118 418 132 HOH HOH A . C 3 HOH 119 419 133 HOH HOH A . C 3 HOH 120 420 134 HOH HOH A . C 3 HOH 121 421 135 HOH HOH A . C 3 HOH 122 422 136 HOH HOH A . C 3 HOH 123 423 137 HOH HOH A . C 3 HOH 124 424 138 HOH HOH A . C 3 HOH 125 425 139 HOH HOH A . C 3 HOH 126 426 140 HOH HOH A . C 3 HOH 127 427 141 HOH HOH A . C 3 HOH 128 428 142 HOH HOH A . C 3 HOH 129 429 143 HOH HOH A . C 3 HOH 130 430 144 HOH HOH A . C 3 HOH 131 431 145 HOH HOH A . C 3 HOH 132 432 146 HOH HOH A . C 3 HOH 133 433 147 HOH HOH A . C 3 HOH 134 434 148 HOH HOH A . C 3 HOH 135 435 149 HOH HOH A . C 3 HOH 136 436 150 HOH HOH A . C 3 HOH 137 437 151 HOH HOH A . C 3 HOH 138 438 152 HOH HOH A . C 3 HOH 139 439 153 HOH HOH A . C 3 HOH 140 440 154 HOH HOH A . C 3 HOH 141 441 155 HOH HOH A . C 3 HOH 142 442 156 HOH HOH A . C 3 HOH 143 443 157 HOH HOH A . C 3 HOH 144 444 158 HOH HOH A . C 3 HOH 145 445 159 HOH HOH A . C 3 HOH 146 446 160 HOH HOH A . C 3 HOH 147 447 161 HOH HOH A . C 3 HOH 148 448 162 HOH HOH A . C 3 HOH 149 449 163 HOH HOH A . C 3 HOH 150 450 164 HOH HOH A . C 3 HOH 151 451 165 HOH HOH A . C 3 HOH 152 452 166 HOH HOH A . C 3 HOH 153 453 167 HOH HOH A . C 3 HOH 154 454 168 HOH HOH A . C 3 HOH 155 455 169 HOH HOH A . C 3 HOH 156 456 170 HOH HOH A . C 3 HOH 157 457 171 HOH HOH A . #