HEADER TRANSCRIPTION/DNA 28-SEP-12 4HC7 TITLE CRYSTAL STRUCTURE OF THE FULL DNA BINDING DOMAIN OF GATA3-COMPLEX 2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: TRANS-ACTING T-CELL-SPECIFIC TRANSCRIPTION FACTOR GATA-3; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 260 -365; COMPND 5 SYNONYM: GATA-BINDING FACTOR 3; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: DNA (5'- COMPND 9 D(*TP*TP*CP*CP*TP*AP*AP*AP*TP*CP*AP*GP*AP*GP*AP*TP*AP*AP*CP*C)-3'); COMPND 10 CHAIN: W, Y; COMPND 11 ENGINEERED: YES; COMPND 12 MOL_ID: 3; COMPND 13 MOLECULE: DNA (5'- COMPND 14 D(*AP*AP*GP*GP*TP*TP*AP*TP*CP*TP*CP*TP*GP*AP*TP*TP*TP*AP*GP*G)-3'); COMPND 15 CHAIN: X, Z; COMPND 16 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: GATA3; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 MOL_ID: 2; SOURCE 9 SYNTHETIC: YES; SOURCE 10 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN HUMANS.; SOURCE 11 MOL_ID: 3; SOURCE 12 SYNTHETIC: YES; SOURCE 13 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN HUMANS. KEYWDS GATA TRANSCRIPTION FACTOR, ZINC FINGER, TRANSCRIPTION-DNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR Y.CHEN,D.L.BATES,R.DEY,L.CHEN REVDAT 5 28-FEB-24 4HC7 1 REMARK SEQADV LINK REVDAT 4 15-NOV-17 4HC7 1 REMARK REVDAT 3 17-DEC-14 4HC7 1 REMARK REVDAT 2 02-JAN-13 4HC7 1 JRNL REVDAT 1 05-DEC-12 4HC7 0 JRNL AUTH Y.CHEN,D.L.BATES,R.DEY,P.H.CHEN,A.C.MACHADO, JRNL AUTH 2 I.A.LAIRD-OFFRINGA,R.ROHS,L.CHEN JRNL TITL DNA BINDING BY GATA TRANSCRIPTION FACTOR SUGGESTS MECHANISMS JRNL TITL 2 OF DNA LOOPING AND LONG-RANGE GENE REGULATION. JRNL REF CELL REP V. 2 1197 2012 JRNL REFN ESSN 2211-1247 JRNL PMID 23142663 JRNL DOI 10.1016/J.CELREP.2012.10.012 REMARK 2 REMARK 2 RESOLUTION. 2.65 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : CNS REMARK 3 AUTHORS : BRUNGER,ADAMS,CLORE,DELANO,GROS,GROSSE- REMARK 3 : KUNSTLEVE,JIANG,KUSZEWSKI,NILGES,PANNU, REMARK 3 : READ,RICE,SIMONSON,WARREN REMARK 3 REMARK 3 REFINEMENT TARGET : NULL REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.65 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 30.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 1608.0 REMARK 3 DATA CUTOFF HIGH (ABS(F)) : NULL REMARK 3 DATA CUTOFF LOW (ABS(F)) : NULL REMARK 3 COMPLETENESS (WORKING+TEST) (%) : 87.4 REMARK 3 NUMBER OF REFLECTIONS : 15755 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : NULL REMARK 3 FREE R VALUE TEST SET SELECTION : NULL REMARK 3 R VALUE (WORKING SET) : 0.226 REMARK 3 FREE R VALUE : 0.264 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 8.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1548 REMARK 3 ESTIMATED ERROR OF FREE R VALUE : NULL REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : NULL REMARK 3 BIN RESOLUTION RANGE HIGH (A) : NULL REMARK 3 BIN RESOLUTION RANGE LOW (A) : NULL REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : NULL REMARK 3 REFLECTIONS IN BIN (WORKING SET) : NULL REMARK 3 BIN R VALUE (WORKING SET) : NULL REMARK 3 BIN FREE R VALUE : NULL REMARK 3 BIN FREE R VALUE TEST SET SIZE (%) : NULL REMARK 3 BIN FREE R VALUE TEST SET COUNT : NULL REMARK 3 ESTIMATED ERROR OF BIN FREE R VALUE : NULL REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1597 REMARK 3 NUCLEIC ACID ATOMS : 1628 REMARK 3 HETEROGEN ATOMS : 4 REMARK 3 SOLVENT ATOMS : 213 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 60.64 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 9.52000 REMARK 3 B22 (A**2) : 4.94300 REMARK 3 B33 (A**2) : -14.46200 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : -12.66900 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM SIGMAA (A) : NULL REMARK 3 LOW RESOLUTION CUTOFF (A) : NULL REMARK 3 REMARK 3 CROSS-VALIDATED ESTIMATED COORDINATE ERROR. REMARK 3 ESD FROM C-V LUZZATI PLOT (A) : NULL REMARK 3 ESD FROM C-V SIGMAA (A) : NULL REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES. REMARK 3 BOND LENGTHS (A) : NULL REMARK 3 BOND ANGLES (DEGREES) : NULL REMARK 3 DIHEDRAL ANGLES (DEGREES) : NULL REMARK 3 IMPROPER ANGLES (DEGREES) : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL MODEL : NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. RMS SIGMA REMARK 3 MAIN-CHAIN BOND (A**2) : 1.760 ; 1.500 REMARK 3 MAIN-CHAIN ANGLE (A**2) : 3.203 ; 2.000 REMARK 3 SIDE-CHAIN BOND (A**2) : 2.318 ; 2.000 REMARK 3 SIDE-CHAIN ANGLE (A**2) : 3.906 ; 2.500 REMARK 3 REMARK 3 BULK SOLVENT MODELING. REMARK 3 METHOD USED : NULL REMARK 3 KSOL : NULL REMARK 3 BSOL : 43.86 REMARK 3 REMARK 3 NCS MODEL : NULL REMARK 3 REMARK 3 NCS RESTRAINTS. RMS SIGMA/WEIGHT REMARK 3 GROUP 1 POSITIONAL (A) : NULL ; NULL REMARK 3 GROUP 1 B-FACTOR (A**2) : NULL ; NULL REMARK 3 REMARK 3 PARAMETER FILE 1 : CNS_TOPPAR:PROTEIN_REP.PARAM REMARK 3 PARAMETER FILE 2 : CNS_TOPPAR:DNA-RNA_REP.PARAM REMARK 3 PARAMETER FILE 3 : CNS_TOPPAR:ION.PARAM REMARK 3 PARAMETER FILE 4 : CNS_TOPPAR:WATER_REP.PARAM REMARK 3 PARAMETER FILE 5 : NULL REMARK 3 TOPOLOGY FILE 1 : NULL REMARK 3 TOPOLOGY FILE 2 : NULL REMARK 3 TOPOLOGY FILE 3 : NULL REMARK 3 TOPOLOGY FILE 4 : NULL REMARK 3 TOPOLOGY FILE 5 : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HC7 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 09-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075283. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : NULL REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 5.0.3 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 15755 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: CNS REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 60.74 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: NULL REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 32.68650 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3580 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 14370 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -24.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, W, X REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4730 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12120 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -38.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B, Y, Z REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 257 REMARK 465 SER A 258 REMARK 465 ARG A 367 REMARK 465 LYS A 368 REMARK 465 MET A 369 REMARK 465 SER A 370 REMARK 465 SER A 371 REMARK 465 GLY B 257 REMARK 465 SER B 258 REMARK 465 PRO B 304 REMARK 465 LYS B 305 REMARK 465 ARG B 306 REMARK 465 ARG B 307 REMARK 465 LEU B 308 REMARK 465 SER B 309 REMARK 465 ALA B 310 REMARK 465 ALA B 311 REMARK 465 ARG B 312 REMARK 465 ARG B 313 REMARK 465 ALA B 314 REMARK 465 ARG B 367 REMARK 465 LYS B 368 REMARK 465 MET B 369 REMARK 465 SER B 370 REMARK 465 SER B 371 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 DA W 7 N9 - C1' - C2' ANGL. DEV. = 8.5 DEGREES REMARK 500 DT W 9 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DT W 16 O4' - C1' - N1 ANGL. DEV. = 2.4 DEGREES REMARK 500 DA W 17 N9 - C1' - C2' ANGL. DEV. = 10.1 DEGREES REMARK 500 DA W 17 O4' - C1' - N9 ANGL. DEV. = 2.2 DEGREES REMARK 500 DA W 18 N9 - C1' - C2' ANGL. DEV. = 10.7 DEGREES REMARK 500 DT X 6 O4' - C1' - N1 ANGL. DEV. = 2.0 DEGREES REMARK 500 DA Y 7 O4' - C1' - N9 ANGL. DEV. = 2.4 DEGREES REMARK 500 DG Y 12 O4' - C1' - N9 ANGL. DEV. = 2.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 MET A 260 -25.37 -143.88 REMARK 500 SER A 309 -84.31 -174.09 REMARK 500 ALA A 310 -8.58 -47.82 REMARK 500 ALA A 311 -81.99 -126.73 REMARK 500 ARG A 312 -71.20 -19.57 REMARK 500 ARG A 313 71.26 -65.00 REMARK 500 ALA A 314 44.88 -142.83 REMARK 500 ASN A 320 -63.06 -98.55 REMARK 500 LEU A 355 -9.25 -49.57 REMARK 500 MET B 260 -97.56 148.09 REMARK 500 THR B 316 111.55 72.22 REMARK 500 SER B 317 137.05 14.89 REMARK 500 ASN B 320 -62.92 -99.12 REMARK 500 LEU B 355 -9.35 -49.57 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: PLANAR GROUPS REMARK 500 REMARK 500 PLANAR GROUPS IN THE FOLLOWING RESIDUES HAVE A TOTAL REMARK 500 RMS DISTANCE OF ALL ATOMS FROM THE BEST-FIT PLANE REMARK 500 BY MORE THAN AN EXPECTED VALUE OF 6*RMSD, WITH AN REMARK 500 RMSD 0.02 ANGSTROMS, OR AT LEAST ONE ATOM HAS REMARK 500 AN RMSD GREATER THAN THIS VALUE REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI RMS TYPE REMARK 500 DC W 3 0.09 SIDE CHAIN REMARK 500 DT W 5 0.06 SIDE CHAIN REMARK 500 DA W 6 0.08 SIDE CHAIN REMARK 500 DA W 8 0.06 SIDE CHAIN REMARK 500 DC W 10 0.06 SIDE CHAIN REMARK 500 DA W 11 0.07 SIDE CHAIN REMARK 500 DA W 13 0.09 SIDE CHAIN REMARK 500 DG W 14 0.07 SIDE CHAIN REMARK 500 DA W 15 0.07 SIDE CHAIN REMARK 500 DA W 17 0.06 SIDE CHAIN REMARK 500 DA W 18 0.12 SIDE CHAIN REMARK 500 DC W 19 0.07 SIDE CHAIN REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 264 SG REMARK 620 2 CYS A 267 SG 107.0 REMARK 620 3 CYS A 285 SG 110.3 116.7 REMARK 620 4 CYS A 288 SG 105.8 117.8 98.7 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 318 SG REMARK 620 2 CYS A 321 SG 116.1 REMARK 620 3 CYS A 339 SG 114.0 107.1 REMARK 620 4 CYS A 342 SG 107.8 109.5 101.3 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 402 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 264 SG REMARK 620 2 CYS B 267 SG 102.0 REMARK 620 3 CYS B 285 SG 110.5 125.0 REMARK 620 4 CYS B 288 SG 100.5 115.8 100.6 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 318 SG REMARK 620 2 CYS B 321 SG 120.4 REMARK 620 3 CYS B 339 SG 122.1 104.7 REMARK 620 4 CYS B 342 SG 107.2 101.4 96.5 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 402 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HC9 RELATED DB: PDB REMARK 900 RELATED ID: 4HCA RELATED DB: PDB DBREF 4HC7 A 261 371 UNP P23771 GATA3_HUMAN 260 370 DBREF 4HC7 B 261 371 UNP P23771 GATA3_HUMAN 260 370 DBREF 4HC7 W 1 20 PDB 4HC7 4HC7 1 20 DBREF 4HC7 Y 1 20 PDB 4HC7 4HC7 1 20 DBREF 4HC7 X 1 20 PDB 4HC7 4HC7 1 20 DBREF 4HC7 Z 1 20 PDB 4HC7 4HC7 1 20 SEQADV 4HC7 GLY A 257 UNP P23771 EXPRESSION TAG SEQADV 4HC7 SER A 258 UNP P23771 EXPRESSION TAG SEQADV 4HC7 HIS A 259 UNP P23771 EXPRESSION TAG SEQADV 4HC7 MET A 260 UNP P23771 EXPRESSION TAG SEQADV 4HC7 GLY B 257 UNP P23771 EXPRESSION TAG SEQADV 4HC7 SER B 258 UNP P23771 EXPRESSION TAG SEQADV 4HC7 HIS B 259 UNP P23771 EXPRESSION TAG SEQADV 4HC7 MET B 260 UNP P23771 EXPRESSION TAG SEQRES 1 A 115 GLY SER HIS MET GLY ARG GLU CYS VAL ASN CYS GLY ALA SEQRES 2 A 115 THR SER THR PRO LEU TRP ARG ARG ASP GLY THR GLY HIS SEQRES 3 A 115 TYR LEU CYS ASN ALA CYS GLY LEU TYR HIS LYS MET ASN SEQRES 4 A 115 GLY GLN ASN ARG PRO LEU ILE LYS PRO LYS ARG ARG LEU SEQRES 5 A 115 SER ALA ALA ARG ARG ALA GLY THR SER CYS ALA ASN CYS SEQRES 6 A 115 GLN THR THR THR THR THR LEU TRP ARG ARG ASN ALA ASN SEQRES 7 A 115 GLY ASP PRO VAL CYS ASN ALA CYS GLY LEU TYR TYR LYS SEQRES 8 A 115 LEU HIS ASN ILE ASN ARG PRO LEU THR MET LYS LYS GLU SEQRES 9 A 115 GLY ILE GLN THR ARG ASN ARG LYS MET SER SER SEQRES 1 W 20 DT DT DC DC DT DA DA DA DT DC DA DG DA SEQRES 2 W 20 DG DA DT DA DA DC DC SEQRES 1 X 20 DA DA DG DG DT DT DA DT DC DT DC DT DG SEQRES 2 X 20 DA DT DT DT DA DG DG SEQRES 1 B 115 GLY SER HIS MET GLY ARG GLU CYS VAL ASN CYS GLY ALA SEQRES 2 B 115 THR SER THR PRO LEU TRP ARG ARG ASP GLY THR GLY HIS SEQRES 3 B 115 TYR LEU CYS ASN ALA CYS GLY LEU TYR HIS LYS MET ASN SEQRES 4 B 115 GLY GLN ASN ARG PRO LEU ILE LYS PRO LYS ARG ARG LEU SEQRES 5 B 115 SER ALA ALA ARG ARG ALA GLY THR SER CYS ALA ASN CYS SEQRES 6 B 115 GLN THR THR THR THR THR LEU TRP ARG ARG ASN ALA ASN SEQRES 7 B 115 GLY ASP PRO VAL CYS ASN ALA CYS GLY LEU TYR TYR LYS SEQRES 8 B 115 LEU HIS ASN ILE ASN ARG PRO LEU THR MET LYS LYS GLU SEQRES 9 B 115 GLY ILE GLN THR ARG ASN ARG LYS MET SER SER SEQRES 1 Y 20 DT DT DC DC DT DA DA DA DT DC DA DG DA SEQRES 2 Y 20 DG DA DT DA DA DC DC SEQRES 1 Z 20 DA DA DG DG DT DT DA DT DC DT DC DT DG SEQRES 2 Z 20 DA DT DT DT DA DG DG HET ZN A 401 1 HET ZN A 402 1 HET ZN B 401 1 HET ZN B 402 1 HETNAM ZN ZINC ION FORMUL 7 ZN 4(ZN 2+) FORMUL 11 HOH *213(H2 O) HELIX 1 1 CYS A 285 GLY A 296 1 12 HELIX 2 2 CYS A 339 ASN A 350 1 12 HELIX 3 3 PRO A 354 LYS A 358 5 5 HELIX 4 4 CYS B 285 GLY B 296 1 12 HELIX 5 5 CYS B 339 ASN B 350 1 12 HELIX 6 6 PRO B 354 LYS B 358 5 5 SHEET 1 A 2 ARG A 276 ARG A 277 0 SHEET 2 A 2 TYR A 283 LEU A 284 -1 O LEU A 284 N ARG A 276 SHEET 1 B 2 ARG A 330 ARG A 331 0 SHEET 2 B 2 PRO A 337 VAL A 338 -1 O VAL A 338 N ARG A 330 SHEET 1 C 2 ARG B 276 ARG B 277 0 SHEET 2 C 2 TYR B 283 LEU B 284 -1 O LEU B 284 N ARG B 276 SHEET 1 D 2 ARG B 330 ARG B 331 0 SHEET 2 D 2 PRO B 337 VAL B 338 -1 O VAL B 338 N ARG B 330 LINK SG CYS A 264 ZN ZN A 402 1555 1555 2.37 LINK SG CYS A 267 ZN ZN A 402 1555 1555 2.41 LINK SG CYS A 285 ZN ZN A 402 1555 1555 2.43 LINK SG CYS A 288 ZN ZN A 402 1555 1555 2.30 LINK SG CYS A 318 ZN ZN A 401 1555 1555 2.58 LINK SG CYS A 321 ZN ZN A 401 1555 1555 2.29 LINK SG CYS A 339 ZN ZN A 401 1555 1555 2.28 LINK SG CYS A 342 ZN ZN A 401 1555 1555 2.26 LINK SG CYS B 264 ZN ZN B 402 1555 1555 2.51 LINK SG CYS B 267 ZN ZN B 402 1555 1555 2.32 LINK SG CYS B 285 ZN ZN B 402 1555 1555 2.30 LINK SG CYS B 288 ZN ZN B 402 1555 1555 2.34 LINK SG CYS B 318 ZN ZN B 401 1555 1555 2.42 LINK SG CYS B 321 ZN ZN B 401 1555 1555 2.40 LINK SG CYS B 339 ZN ZN B 401 1555 1555 2.29 LINK SG CYS B 342 ZN ZN B 401 1555 1555 2.48 SITE 1 AC1 4 CYS A 318 CYS A 321 CYS A 339 CYS A 342 SITE 1 AC2 4 CYS A 264 CYS A 267 CYS A 285 CYS A 288 SITE 1 AC3 4 CYS B 318 CYS B 321 CYS B 339 CYS B 342 SITE 1 AC4 4 CYS B 264 CYS B 267 CYS B 285 CYS B 288 CRYST1 65.765 65.373 72.922 90.00 96.75 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015206 0.000000 0.001800 0.00000 SCALE2 0.000000 0.015297 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013809 0.00000