HEADER CELL CYCLE 29-SEP-12 4HCE TITLE CRYSTAL STRUCTURE OF THE TELOMERIC SACCHAROMYCES CEREVISIAE CDC13 OB2 TITLE 2 DOMAIN COMPND MOL_ID: 1; COMPND 2 MOLECULE: CELL DIVISION CONTROL PROTEIN 13; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: CDC13 OB2, UNP RESIDUES 344-495; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: SACCHAROMYCES CEREVISIAE; SOURCE 3 ORGANISM_COMMON: BAKER'S YEAST; SOURCE 4 ORGANISM_TAXID: 559292; SOURCE 5 STRAIN: ATCC 204508 / S288C; SOURCE 6 GENE: CDC13, YDL220C; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS OB FOLD, OLIGONUCLEOTIDE/OLIGOSACCHARIDE BINDING FOLD, CELL CYCLE EXPDTA X-RAY DIFFRACTION AUTHOR M.MASON,J.J.WANNAT,S.HARPER,D.C.SCHULTZ,D.W.SPEICHER,F.B.JOHNSON, AUTHOR 2 E.SKORDALAKES REVDAT 3 30-JAN-13 4HCE 1 JRNL REVDAT 2 02-JAN-13 4HCE 1 JRNL REVDAT 1 28-NOV-12 4HCE 0 JRNL AUTH M.MASON,J.J.WANAT,S.HARPER,D.C.SCHULTZ,D.W.SPEICHER, JRNL AUTH 2 F.B.JOHNSON,E.SKORDALAKES JRNL TITL CDC13 OB2 DIMERIZATION REQUIRED FOR PRODUCTIVE STN1 BINDING JRNL TITL 2 AND EFFICIENT TELOMERE MAINTENANCE. JRNL REF STRUCTURE V. 21 109 2013 JRNL REFN ISSN 0969-2126 JRNL PMID 23177925 JRNL DOI 10.1016/J.STR.2012.10.012 REMARK 2 REMARK 2 RESOLUTION. 2.30 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,VAGIN,DODSON REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.30 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 40.00 REMARK 3 DATA CUTOFF (SIGMA(F)) : 3.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 3 NUMBER OF REFLECTIONS : 14100 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.204 REMARK 3 R VALUE (WORKING SET) : 0.202 REMARK 3 FREE R VALUE : 0.247 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 757 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.30 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.36 REMARK 3 REFLECTION IN BIN (WORKING SET) : 881 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 92.12 REMARK 3 BIN R VALUE (WORKING SET) : 0.2440 REMARK 3 BIN FREE R VALUE SET COUNT : 43 REMARK 3 BIN FREE R VALUE : 0.3280 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2035 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 105 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 45.69 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.79000 REMARK 3 B22 (A**2) : -1.19000 REMARK 3 B33 (A**2) : -0.61000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.292 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.225 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.151 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 13.707 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.946 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.916 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2072 ; 0.010 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2816 ; 1.553 ; 1.993 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 257 ; 7.870 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 84 ;41.012 ;25.476 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 381 ;17.905 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 10 ;16.415 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 336 ; 0.104 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 1510 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 346 A 474 REMARK 3 ORIGIN FOR THE GROUP (A): -16.0360 -5.2070 13.0450 REMARK 3 T TENSOR REMARK 3 T11: 0.0780 T22: 0.0495 REMARK 3 T33: 0.1308 T12: 0.0093 REMARK 3 T13: 0.0284 T23: 0.0265 REMARK 3 L TENSOR REMARK 3 L11: 0.3586 L22: 2.5456 REMARK 3 L33: 2.0992 L12: 0.1766 REMARK 3 L13: 0.0715 L23: -1.4296 REMARK 3 S TENSOR REMARK 3 S11: 0.0642 S12: -0.0018 S13: -0.0263 REMARK 3 S21: -0.0353 S22: -0.0900 S23: -0.0831 REMARK 3 S31: 0.1111 S32: 0.0517 S33: 0.0257 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 346 B 474 REMARK 3 ORIGIN FOR THE GROUP (A): -21.1340 14.9490 12.6910 REMARK 3 T TENSOR REMARK 3 T11: 0.0941 T22: 0.0949 REMARK 3 T33: 0.1111 T12: -0.0229 REMARK 3 T13: -0.0132 T23: 0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.4753 L22: 1.0527 REMARK 3 L33: 1.5410 L12: 0.0073 REMARK 3 L13: -0.4161 L23: 0.2796 REMARK 3 S TENSOR REMARK 3 S11: 0.0075 S12: 0.0115 S13: 0.0025 REMARK 3 S21: 0.1413 S22: 0.0042 S23: -0.0285 REMARK 3 S31: 0.1092 S32: -0.0041 S33: -0.0118 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 2 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 501 A 540 REMARK 3 RESIDUE RANGE : B 501 B 565 REMARK 3 ORIGIN FOR THE GROUP (A): -19.6090 7.7620 14.8800 REMARK 3 T TENSOR REMARK 3 T11: 0.0888 T22: 0.1967 REMARK 3 T33: 0.1177 T12: -0.0331 REMARK 3 T13: 0.0104 T23: 0.0272 REMARK 3 L TENSOR REMARK 3 L11: 0.0630 L22: 1.7878 REMARK 3 L33: 0.0620 L12: -0.2985 REMARK 3 L13: 0.0253 L23: 0.0150 REMARK 3 S TENSOR REMARK 3 S11: -0.0054 S12: 0.0134 S13: 0.0301 REMARK 3 S21: 0.1659 S22: -0.0777 S23: 0.0168 REMARK 3 S31: 0.0306 S32: 0.0057 S33: 0.0831 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HCE COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-OCT-12. REMARK 100 THE RCSB ID CODE IS RCSB075290. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 06-MAR-11; 08-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100; NULL REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y; N REMARK 200 RADIATION SOURCE : NSLS; NULL REMARK 200 BEAMLINE : X29A; NULL REMARK 200 X-RAY GENERATOR MODEL : NULL; NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M; NULL REMARK 200 WAVELENGTH OR RANGE (A) : 1.1, 1.0005; NULL REMARK 200 MONOCHROMATOR : CRYSTAL; NULL REMARK 200 OPTICS : NULL; NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD; CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315; ADSC QUANTUM REMARK 200 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 14100 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.300 REMARK 200 RESOLUTION RANGE LOW (A) : 40.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.3 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.30 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.42 REMARK 200 COMPLETENESS FOR SHELL (%) : 96.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH; NULL REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SIRAS REMARK 200 SOFTWARE USED: SOLVE REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 48.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.1 M NACL, 0.1 M BIS-TRIS PH 6.5, AND REMARK 280 1.5 M AMSO4, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 291K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 20.44200 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 50.34700 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 39.38500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 50.34700 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 20.44200 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 39.38500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 2750 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 12970 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -22.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 LYS A 344 REMARK 465 ALA A 345 REMARK 465 THR A 475 REMARK 465 GLN A 476 REMARK 465 ALA A 477 REMARK 465 GLN A 478 REMARK 465 ALA A 479 REMARK 465 GLN A 480 REMARK 465 VAL A 481 REMARK 465 GLN A 482 REMARK 465 VAL A 483 REMARK 465 PRO A 484 REMARK 465 ALA A 485 REMARK 465 GLN A 486 REMARK 465 SER A 487 REMARK 465 SER A 488 REMARK 465 ALA A 489 REMARK 465 SER A 490 REMARK 465 ILE A 491 REMARK 465 ASP A 492 REMARK 465 PRO A 493 REMARK 465 SER A 494 REMARK 465 ARG A 495 REMARK 465 LYS B 344 REMARK 465 ALA B 345 REMARK 465 GLN B 476 REMARK 465 ALA B 477 REMARK 465 GLN B 478 REMARK 465 ALA B 479 REMARK 465 GLN B 480 REMARK 465 VAL B 481 REMARK 465 GLN B 482 REMARK 465 VAL B 483 REMARK 465 PRO B 484 REMARK 465 ALA B 485 REMARK 465 GLN B 486 REMARK 465 SER B 487 REMARK 465 SER B 488 REMARK 465 ALA B 489 REMARK 465 SER B 490 REMARK 465 ILE B 491 REMARK 465 ASP B 492 REMARK 465 PRO B 493 REMARK 465 SER B 494 REMARK 465 ARG B 495 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 395 49.67 -141.71 REMARK 500 ASP A 398 103.33 89.45 REMARK 500 LYS A 399 -91.03 149.51 REMARK 500 ASN A 455 28.53 134.69 REMARK 500 ASP A 456 -23.66 73.51 REMARK 500 ALA A 459 10.78 45.58 REMARK 500 LEU B 393 53.38 39.96 REMARK 500 VAL B 396 110.34 -33.25 REMARK 500 ASP B 398 -29.01 115.40 REMARK 500 ASN B 455 -83.32 -58.18 REMARK 500 LYS B 457 -94.22 -142.04 REMARK 500 ALA B 459 -146.49 93.46 REMARK 500 SER B 460 -12.66 -148.81 REMARK 500 PRO B 461 -174.52 -66.76 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CHIRAL CENTERS REMARK 500 REMARK 500 UNEXPECTED CONFIGURATION OF THE FOLLOWING CHIRAL REMARK 500 CENTER(S) USING IMPROPER CA--C--CB--N CHIRALITY REMARK 500 FOR AMINO ACIDS AND C1'--O4'--N1(N9)--C2' FOR REMARK 500 NUCLEIC ACIDS OR EQUIVALENT ANGLE REMARK 500 M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,6X,F5.1,6X,A1,10X,A1,3X,A16) REMARK 500 REMARK 500 M RES CSSEQI IMPROPER EXPECTED FOUND DETAILS REMARK 500 LYS A 399 19.9 L L OUTSIDE RANGE REMARK 500 REMARK 500 REMARK: NULL DBREF 4HCE A 344 495 UNP P32797 CDC13_YEAST 344 495 DBREF 4HCE B 344 495 UNP P32797 CDC13_YEAST 344 495 SEQRES 1 A 152 LYS ALA ILE SER TYR GLU GLN LEU SER LEU ALA SER VAL SEQRES 2 A 152 GLY SER VAL GLU ARG LEU GLU GLY LYS ILE VAL GLY MET SEQRES 3 A 152 ASN PRO PRO GLN PHE ALA SER ILE ASN GLU PHE LYS TYR SEQRES 4 A 152 CYS THR LEU LYS LEU TYR PHE THR GLN LEU LEU PRO ASN SEQRES 5 A 152 VAL PRO ASP LYS VAL LEU VAL PRO GLY VAL ASN CYS ILE SEQRES 6 A 152 GLU ILE VAL ILE PRO THR ARG GLU ARG ILE CYS GLU LEU SEQRES 7 A 152 PHE GLY VAL LEU ASN CYS GLN SER ASP LYS ILE SER ASP SEQRES 8 A 152 ILE LEU LEU LEU GLU LYS PRO ASP ARG ILE SER VAL GLU SEQRES 9 A 152 VAL GLU ARG ILE LEU TRP ASP ASN ASP LYS THR ALA SER SEQRES 10 A 152 PRO GLY MET ALA VAL TRP SER LEU LYS ASN ILE SER THR SEQRES 11 A 152 ASP THR GLN ALA GLN ALA GLN VAL GLN VAL PRO ALA GLN SEQRES 12 A 152 SER SER ALA SER ILE ASP PRO SER ARG SEQRES 1 B 152 LYS ALA ILE SER TYR GLU GLN LEU SER LEU ALA SER VAL SEQRES 2 B 152 GLY SER VAL GLU ARG LEU GLU GLY LYS ILE VAL GLY MET SEQRES 3 B 152 ASN PRO PRO GLN PHE ALA SER ILE ASN GLU PHE LYS TYR SEQRES 4 B 152 CYS THR LEU LYS LEU TYR PHE THR GLN LEU LEU PRO ASN SEQRES 5 B 152 VAL PRO ASP LYS VAL LEU VAL PRO GLY VAL ASN CYS ILE SEQRES 6 B 152 GLU ILE VAL ILE PRO THR ARG GLU ARG ILE CYS GLU LEU SEQRES 7 B 152 PHE GLY VAL LEU ASN CYS GLN SER ASP LYS ILE SER ASP SEQRES 8 B 152 ILE LEU LEU LEU GLU LYS PRO ASP ARG ILE SER VAL GLU SEQRES 9 B 152 VAL GLU ARG ILE LEU TRP ASP ASN ASP LYS THR ALA SER SEQRES 10 B 152 PRO GLY MET ALA VAL TRP SER LEU LYS ASN ILE SER THR SEQRES 11 B 152 ASP THR GLN ALA GLN ALA GLN VAL GLN VAL PRO ALA GLN SEQRES 12 B 152 SER SER ALA SER ILE ASP PRO SER ARG FORMUL 3 HOH *105(H2 O) HELIX 1 1 SER A 347 LEU A 353 1 7 HELIX 2 2 SER A 376 LYS A 381 5 6 HELIX 3 3 THR A 414 GLY A 423 1 10 HELIX 4 4 VAL A 424 CYS A 427 5 4 HELIX 5 5 GLN A 428 LEU A 437 1 10 HELIX 6 6 SER B 347 SER B 352 1 6 HELIX 7 7 SER B 376 LYS B 381 5 6 HELIX 8 8 THR B 414 GLY B 423 1 10 HELIX 9 9 VAL B 424 CYS B 427 5 4 HELIX 10 10 GLN B 428 LEU B 436 1 9 SHEET 1 A 6 VAL A 359 ASN A 370 0 SHEET 2 A 6 LEU A 385 THR A 390 -1 O THR A 390 N LYS A 365 SHEET 3 A 6 ILE A 408 ILE A 412 -1 O ILE A 410 N LEU A 387 SHEET 4 A 6 MET A 463 SER A 472 1 O TRP A 466 N VAL A 411 SHEET 5 A 6 ILE A 444 TRP A 453 -1 N GLU A 447 O ASN A 470 SHEET 6 A 6 VAL A 359 ASN A 370 -1 N GLY A 364 O ILE A 444 SHEET 1 B 6 VAL B 359 ASN B 370 0 SHEET 2 B 6 LEU B 385 THR B 390 -1 O LYS B 386 N ASN B 370 SHEET 3 B 6 ILE B 408 ILE B 412 -1 O ILE B 410 N LEU B 387 SHEET 4 B 6 MET B 463 SER B 472 1 O TRP B 466 N VAL B 411 SHEET 5 B 6 ILE B 444 TRP B 453 -1 N SER B 445 O SER B 472 SHEET 6 B 6 VAL B 359 ASN B 370 -1 N GLY B 364 O ILE B 444 SSBOND 1 CYS A 383 CYS B 383 1555 1555 2.10 CISPEP 1 ASN A 370 PRO A 371 0 -3.75 CISPEP 2 PRO A 397 ASP A 398 0 14.58 CISPEP 3 ASP A 454 ASN A 455 0 -1.08 CISPEP 4 ASN B 370 PRO B 371 0 -2.55 CISPEP 5 SER B 460 PRO B 461 0 -8.49 CISPEP 6 ASP B 474 THR B 475 0 -29.76 CRYST1 40.884 78.770 100.694 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.024459 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012695 0.000000 0.00000 SCALE3 0.000000 0.000000 0.009931 0.00000