data_4HDE # _entry.id 4HDE # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4HDE RCSB RCSB075325 WWPDB D_1000075325 # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id IDP05583 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4HDE _pdbx_database_status.recvd_initial_deposition_date 2012-10-02 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry Y _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Tan, K.' 1 'Zhou, M.' 2 'Kwon, K.' 3 'Anderson, W.F.' 4 'Joachimiak, A.' 5 'Center for Structural Genomics of Infectious Diseases (CSGID)' 6 # _citation.id primary _citation.title 'The crystal structure of a SCO1/SenC family lipoprotein from Bacillus anthracis str. Ames' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Tan, K.' 1 primary 'Zhou, M.' 2 primary 'Kwon, K.' 3 primary 'Anderson, W.F.' 4 primary 'Joachimiak, A.' 5 # _cell.entry_id 4HDE _cell.length_a 34.985 _cell.length_b 48.468 _cell.length_c 88.551 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4HDE _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'SCO1/SenC family lipoprotein' 19828.539 1 ? ? 'UNP residues 29-195' ? 2 water nat water 18.015 249 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;SNALRKPLNWDLETFQFTNQDGKPFGTKDLKGKVWVADF(MSE)FTNCQTVCPP(MSE)TAN(MSE)AKLQK(MSE)AKE EKLDVQFVSFSVDPDLDKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNG KV(MSE)KKYSGISNTPYEDIIRD(MSE)KRLAE ; _entity_poly.pdbx_seq_one_letter_code_can ;SNALRKPLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDL DKPENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYED IIRDMKRLAE ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier IDP05583 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 SER n 1 2 ASN n 1 3 ALA n 1 4 LEU n 1 5 ARG n 1 6 LYS n 1 7 PRO n 1 8 LEU n 1 9 ASN n 1 10 TRP n 1 11 ASP n 1 12 LEU n 1 13 GLU n 1 14 THR n 1 15 PHE n 1 16 GLN n 1 17 PHE n 1 18 THR n 1 19 ASN n 1 20 GLN n 1 21 ASP n 1 22 GLY n 1 23 LYS n 1 24 PRO n 1 25 PHE n 1 26 GLY n 1 27 THR n 1 28 LYS n 1 29 ASP n 1 30 LEU n 1 31 LYS n 1 32 GLY n 1 33 LYS n 1 34 VAL n 1 35 TRP n 1 36 VAL n 1 37 ALA n 1 38 ASP n 1 39 PHE n 1 40 MSE n 1 41 PHE n 1 42 THR n 1 43 ASN n 1 44 CYS n 1 45 GLN n 1 46 THR n 1 47 VAL n 1 48 CYS n 1 49 PRO n 1 50 PRO n 1 51 MSE n 1 52 THR n 1 53 ALA n 1 54 ASN n 1 55 MSE n 1 56 ALA n 1 57 LYS n 1 58 LEU n 1 59 GLN n 1 60 LYS n 1 61 MSE n 1 62 ALA n 1 63 LYS n 1 64 GLU n 1 65 GLU n 1 66 LYS n 1 67 LEU n 1 68 ASP n 1 69 VAL n 1 70 GLN n 1 71 PHE n 1 72 VAL n 1 73 SER n 1 74 PHE n 1 75 SER n 1 76 VAL n 1 77 ASP n 1 78 PRO n 1 79 ASP n 1 80 LEU n 1 81 ASP n 1 82 LYS n 1 83 PRO n 1 84 GLU n 1 85 ASN n 1 86 LEU n 1 87 LYS n 1 88 ALA n 1 89 PHE n 1 90 ILE n 1 91 GLN n 1 92 LYS n 1 93 PHE n 1 94 THR n 1 95 GLU n 1 96 ASP n 1 97 THR n 1 98 SER n 1 99 ASN n 1 100 TRP n 1 101 ASN n 1 102 LEU n 1 103 LEU n 1 104 THR n 1 105 GLY n 1 106 TYR n 1 107 SER n 1 108 LEU n 1 109 GLU n 1 110 ASP n 1 111 ILE n 1 112 THR n 1 113 LYS n 1 114 PHE n 1 115 SER n 1 116 LYS n 1 117 ASP n 1 118 ASN n 1 119 PHE n 1 120 GLN n 1 121 SER n 1 122 LEU n 1 123 VAL n 1 124 ASP n 1 125 LYS n 1 126 PRO n 1 127 GLU n 1 128 ASN n 1 129 GLY n 1 130 GLN n 1 131 VAL n 1 132 ILE n 1 133 HIS n 1 134 GLY n 1 135 THR n 1 136 SER n 1 137 PHE n 1 138 TYR n 1 139 LEU n 1 140 ILE n 1 141 ASP n 1 142 GLN n 1 143 ASN n 1 144 GLY n 1 145 LYS n 1 146 VAL n 1 147 MSE n 1 148 LYS n 1 149 LYS n 1 150 TYR n 1 151 SER n 1 152 GLY n 1 153 ILE n 1 154 SER n 1 155 ASN n 1 156 THR n 1 157 PRO n 1 158 TYR n 1 159 GLU n 1 160 ASP n 1 161 ILE n 1 162 ILE n 1 163 ARG n 1 164 ASP n 1 165 MSE n 1 166 LYS n 1 167 ARG n 1 168 LEU n 1 169 ALA n 1 170 GLU n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name 'anthrax,anthrax bacterium' _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BAS2093, BA_2249, GBAA_2249' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain Ames _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bacillus anthracis' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1392 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)magic' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pMCSG7 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q81R11_BACAN _struct_ref.pdbx_db_accession Q81R11 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LRKPLNWDLETFQFTNQDGKPFGTKDLKGKVWVADFMFTNCQTVCPPMTANMAKLQKMAKEEKLDVQFVSFSVDPDLDKP ENLKAFIQKFTEDTSNWNLLTGYSLEDITKFSKDNFQSLVDKPENGQVIHGTSFYLIDQNGKVMKKYSGISNTPYEDIIR DMKRLAE ; _struct_ref.pdbx_align_begin 29 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4HDE _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 170 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q81R11 _struct_ref_seq.db_align_beg 29 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 195 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 29 _struct_ref_seq.pdbx_auth_seq_align_end 195 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4HDE SER A 1 ? UNP Q81R11 ? ? 'EXPRESSION TAG' 26 1 1 4HDE ASN A 2 ? UNP Q81R11 ? ? 'EXPRESSION TAG' 27 2 1 4HDE ALA A 3 ? UNP Q81R11 ? ? 'EXPRESSION TAG' 28 3 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4HDE _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.89 _exptl_crystal.density_percent_sol 35.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.temp 289 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '0.05M Magnessium chloride, 0.1M HEPES:NaOH, 30%(w/v)PEG MME550, pH 7.5, VAPOR DIFFUSION, SITTING DROP, temperature 289K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details mirror _diffrn_detector.type 'ADSC QUANTUM 315' _diffrn_detector.pdbx_collection_date 2012-07-12 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 crystal' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.97937 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 19-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 19-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97937 # _reflns.entry_id 4HDE _reflns.observed_criterion_sigma_I 0 _reflns.observed_criterion_sigma_F 0 _reflns.d_resolution_low 23.0 _reflns.d_resolution_high 1.317 _reflns.number_obs 35792 _reflns.number_all 35792 _reflns.percent_possible_obs 98.6 _reflns.pdbx_Rmerge_I_obs 0.105 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 33.9 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 4.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.317 _reflns_shell.d_res_low 1.34 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.653 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 2.5 _reflns_shell.pdbx_redundancy 4.4 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 1795 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 5.01 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_R_Free_selection_details random _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4HDE _refine.aniso_B[2][3] -0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML 0.29 _refine.aniso_B[1][3] 0.0000 _refine.pdbx_stereochemistry_target_values ML _refine.aniso_B[3][3] 0.3897 _refine.solvent_model_param_ksol 0.334 _refine.ls_number_restraints ? _refine.aniso_B[1][1] 2.5197 _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.1629 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct SAD _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii 0.95 _refine.correlation_coeff_Fo_to_Fc ? _refine.ls_number_reflns_R_free 1791 _refine.correlation_coeff_Fo_to_Fc_free ? _refine.pdbx_ls_sigma_F 1.35 _refine.ls_percent_reflns_obs 98.08 _refine.ls_R_factor_R_work 0.1617 _refine.overall_SU_R_free ? _refine.ls_d_res_high 1.317 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method ? _refine.B_iso_mean ? _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] -2.9094 _refine.B_iso_max ? _refine.pdbx_ls_sigma_I ? _refine.ls_d_res_low 22.560 _refine.pdbx_overall_phase_error 18.38 _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.aniso_B[1][2] -0.0000 _refine.ls_R_factor_R_free 0.1850 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 35718 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all 35718 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol 36.775 _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1359 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 249 _refine_hist.number_atoms_total 1608 _refine_hist.d_res_high 1.317 _refine_hist.d_res_low 22.560 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id f_bond_d 0.006 ? ? 1423 ? 'X-RAY DIFFRACTION' f_angle_d 1.042 ? ? 1930 ? 'X-RAY DIFFRACTION' f_dihedral_angle_d 11.799 ? ? 548 ? 'X-RAY DIFFRACTION' f_chiral_restr 0.075 ? ? 211 ? 'X-RAY DIFFRACTION' f_plane_restr 0.006 ? ? 250 ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_shell.pdbx_total_number_of_bins_used _refine_ls_shell.d_res_high _refine_ls_shell.d_res_low _refine_ls_shell.number_reflns_R_work _refine_ls_shell.R_factor_R_work _refine_ls_shell.percent_reflns_obs _refine_ls_shell.R_factor_R_free _refine_ls_shell.R_factor_R_free_error _refine_ls_shell.percent_reflns_R_free _refine_ls_shell.number_reflns_R_free _refine_ls_shell.number_reflns_all _refine_ls_shell.R_factor_all _refine_ls_shell.number_reflns_obs _refine_ls_shell.redundancy_reflns_obs _refine_ls_shell.pdbx_refine_id . 1.3172 1.3528 2423 0.2512 93.00 0.2704 . . 131 . . . . 'X-RAY DIFFRACTION' . 1.3528 1.3926 2618 0.2280 100.00 0.2276 . . 149 . . . . 'X-RAY DIFFRACTION' . 1.3926 1.4376 2575 0.2096 100.00 0.2269 . . 125 . . . . 'X-RAY DIFFRACTION' . 1.4376 1.4889 2647 0.1920 100.00 0.2346 . . 132 . . . . 'X-RAY DIFFRACTION' . 1.4889 1.5485 2641 0.1755 100.00 0.2046 . . 115 . . . . 'X-RAY DIFFRACTION' . 1.5485 1.6190 2649 0.1663 99.00 0.1946 . . 123 . . . . 'X-RAY DIFFRACTION' . 1.6190 1.7043 2619 0.1590 100.00 0.1939 . . 139 . . . . 'X-RAY DIFFRACTION' . 1.7043 1.8111 2630 0.1575 99.00 0.1824 . . 149 . . . . 'X-RAY DIFFRACTION' . 1.8111 1.9508 2596 0.1633 99.00 0.1960 . . 158 . . . . 'X-RAY DIFFRACTION' . 1.9508 2.1470 2627 0.1626 99.00 0.1878 . . 128 . . . . 'X-RAY DIFFRACTION' . 2.1470 2.4573 2629 0.1625 98.00 0.1913 . . 139 . . . . 'X-RAY DIFFRACTION' . 2.4573 3.0947 2596 0.1648 97.00 0.2068 . . 159 . . . . 'X-RAY DIFFRACTION' . 3.0947 22.5634 2677 0.1427 94.00 0.1467 . . 144 . . . . 'X-RAY DIFFRACTION' # _struct.entry_id 4HDE _struct.title 'The crystal structure of a SCO1/SenC family lipoprotein from Bacillus anthracis str. Ames' _struct.pdbx_descriptor 'SCO1/SenC family lipoprotein' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4HDE _struct_keywords.pdbx_keywords 'LIPID BINDING PROTEIN' _struct_keywords.text ;structural genomics, The Center for Structural Genomics of Infectious Diseases, CSGID, NIAID, National Institute of Allergy and Infectious Diseases, LIPID BINDING PROTEIN ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details 'THE AUTHOR STATES THAT THE BIOLOGICAL UNIT OF THIS PROTEIN IS EXPERIMENTALLY UNKNOWN. It is predicted to be a monomer.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 27 ? LYS A 31 ? THR A 52 LYS A 56 1 ? 5 HELX_P HELX_P2 2 VAL A 47 ? GLU A 65 ? VAL A 72 GLU A 90 1 ? 19 HELX_P HELX_P3 3 LYS A 82 ? GLN A 91 ? LYS A 107 GLN A 116 1 ? 10 HELX_P HELX_P4 4 SER A 107 ? GLN A 120 ? SER A 132 GLN A 145 1 ? 14 HELX_P HELX_P5 5 PRO A 157 ? GLU A 170 ? PRO A 182 GLU A 195 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order covale1 covale ? ? A PHE 39 C ? ? ? 1_555 A MSE 40 N ? ? A PHE 64 A MSE 65 1_555 ? ? ? ? ? ? ? 1.325 ? covale2 covale ? ? A MSE 40 C ? ? ? 1_555 A PHE 41 N ? ? A MSE 65 A PHE 66 1_555 ? ? ? ? ? ? ? 1.327 ? covale3 covale ? ? A PRO 50 C ? ? ? 1_555 A MSE 51 N ? ? A PRO 75 A MSE 76 1_555 ? ? ? ? ? ? ? 1.330 ? covale4 covale ? ? A MSE 51 C ? ? ? 1_555 A THR 52 N ? ? A MSE 76 A THR 77 1_555 ? ? ? ? ? ? ? 1.328 ? covale5 covale ? ? A ASN 54 C ? ? ? 1_555 A MSE 55 N ? ? A ASN 79 A MSE 80 1_555 ? ? ? ? ? ? ? 1.322 ? covale6 covale ? ? A MSE 55 C ? ? ? 1_555 A ALA 56 N ? ? A MSE 80 A ALA 81 1_555 ? ? ? ? ? ? ? 1.332 ? covale7 covale ? ? A LYS 60 C ? ? ? 1_555 A MSE 61 N ? ? A LYS 85 A MSE 86 1_555 ? ? ? ? ? ? ? 1.325 ? covale8 covale ? ? A MSE 61 C ? ? ? 1_555 A ALA 62 N ? ? A MSE 86 A ALA 87 1_555 ? ? ? ? ? ? ? 1.326 ? covale9 covale ? ? A VAL 146 C ? ? ? 1_555 A MSE 147 N ? ? A VAL 171 A MSE 172 1_555 ? ? ? ? ? ? ? 1.326 ? covale10 covale ? ? A MSE 147 C ? ? ? 1_555 A LYS 148 N ? ? A MSE 172 A LYS 173 1_555 ? ? ? ? ? ? ? 1.333 ? covale11 covale ? ? A ASP 164 C ? ? ? 1_555 A MSE 165 N ? ? A ASP 189 A MSE 190 1_555 ? ? ? ? ? ? ? 1.330 ? covale12 covale ? ? A MSE 165 C ? ? ? 1_555 A LYS 166 N ? ? A MSE 190 A LYS 191 1_555 ? ? ? ? ? ? ? 1.331 ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 2 ? B ? 5 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel B 1 2 ? parallel B 2 3 ? parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLN A 16 ? THR A 18 ? GLN A 41 THR A 43 A 2 PRO A 24 ? GLY A 26 ? PRO A 49 GLY A 51 B 1 TRP A 100 ? LEU A 103 ? TRP A 125 LEU A 128 B 2 GLN A 70 ? SER A 75 ? GLN A 95 SER A 100 B 3 TRP A 35 ? MSE A 40 ? TRP A 60 MSE A 65 B 4 SER A 136 ? ILE A 140 ? SER A 161 ILE A 165 B 5 VAL A 146 ? SER A 151 ? VAL A 171 SER A 176 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N PHE A 17 ? N PHE A 42 O PHE A 25 ? O PHE A 50 B 1 2 O LEU A 103 ? O LEU A 128 N SER A 73 ? N SER A 98 B 2 3 O PHE A 74 ? O PHE A 99 N ASP A 38 ? N ASP A 63 B 3 4 N TRP A 35 ? N TRP A 60 O ILE A 140 ? O ILE A 165 B 4 5 N LEU A 139 ? N LEU A 164 O MSE A 147 ? O MSE A 172 # _database_PDB_matrix.entry_id 4HDE _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4HDE _atom_sites.fract_transf_matrix[1][1] 0.028584 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.020632 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011293 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 SER 1 26 ? ? ? A . n A 1 2 ASN 2 27 ? ? ? A . n A 1 3 ALA 3 28 28 ALA ALA A . n A 1 4 LEU 4 29 29 LEU LEU A . n A 1 5 ARG 5 30 30 ARG ARG A . n A 1 6 LYS 6 31 31 LYS LYS A . n A 1 7 PRO 7 32 32 PRO PRO A . n A 1 8 LEU 8 33 33 LEU LEU A . n A 1 9 ASN 9 34 34 ASN ASN A . n A 1 10 TRP 10 35 35 TRP TRP A . n A 1 11 ASP 11 36 36 ASP ASP A . n A 1 12 LEU 12 37 37 LEU LEU A . n A 1 13 GLU 13 38 38 GLU GLU A . n A 1 14 THR 14 39 39 THR THR A . n A 1 15 PHE 15 40 40 PHE PHE A . n A 1 16 GLN 16 41 41 GLN GLN A . n A 1 17 PHE 17 42 42 PHE PHE A . n A 1 18 THR 18 43 43 THR THR A . n A 1 19 ASN 19 44 44 ASN ASN A . n A 1 20 GLN 20 45 45 GLN GLN A . n A 1 21 ASP 21 46 46 ASP ASP A . n A 1 22 GLY 22 47 47 GLY GLY A . n A 1 23 LYS 23 48 48 LYS LYS A . n A 1 24 PRO 24 49 49 PRO PRO A . n A 1 25 PHE 25 50 50 PHE PHE A . n A 1 26 GLY 26 51 51 GLY GLY A . n A 1 27 THR 27 52 52 THR THR A . n A 1 28 LYS 28 53 53 LYS LYS A . n A 1 29 ASP 29 54 54 ASP ASP A . n A 1 30 LEU 30 55 55 LEU LEU A . n A 1 31 LYS 31 56 56 LYS LYS A . n A 1 32 GLY 32 57 57 GLY GLY A . n A 1 33 LYS 33 58 58 LYS LYS A . n A 1 34 VAL 34 59 59 VAL VAL A . n A 1 35 TRP 35 60 60 TRP TRP A . n A 1 36 VAL 36 61 61 VAL VAL A . n A 1 37 ALA 37 62 62 ALA ALA A . n A 1 38 ASP 38 63 63 ASP ASP A . n A 1 39 PHE 39 64 64 PHE PHE A . n A 1 40 MSE 40 65 65 MSE MSE A . n A 1 41 PHE 41 66 66 PHE PHE A . n A 1 42 THR 42 67 67 THR THR A . n A 1 43 ASN 43 68 68 ASN ASN A . n A 1 44 CYS 44 69 69 CYS CYS A . n A 1 45 GLN 45 70 70 GLN GLN A . n A 1 46 THR 46 71 71 THR THR A . n A 1 47 VAL 47 72 72 VAL VAL A . n A 1 48 CYS 48 73 73 CYS CYS A . n A 1 49 PRO 49 74 74 PRO PRO A . n A 1 50 PRO 50 75 75 PRO PRO A . n A 1 51 MSE 51 76 76 MSE MSE A . n A 1 52 THR 52 77 77 THR THR A . n A 1 53 ALA 53 78 78 ALA ALA A . n A 1 54 ASN 54 79 79 ASN ASN A . n A 1 55 MSE 55 80 80 MSE MSE A . n A 1 56 ALA 56 81 81 ALA ALA A . n A 1 57 LYS 57 82 82 LYS LYS A . n A 1 58 LEU 58 83 83 LEU LEU A . n A 1 59 GLN 59 84 84 GLN GLN A . n A 1 60 LYS 60 85 85 LYS LYS A . n A 1 61 MSE 61 86 86 MSE MSE A . n A 1 62 ALA 62 87 87 ALA ALA A . n A 1 63 LYS 63 88 88 LYS LYS A . n A 1 64 GLU 64 89 89 GLU GLU A . n A 1 65 GLU 65 90 90 GLU GLU A . n A 1 66 LYS 66 91 91 LYS LYS A . n A 1 67 LEU 67 92 92 LEU LEU A . n A 1 68 ASP 68 93 93 ASP ASP A . n A 1 69 VAL 69 94 94 VAL VAL A . n A 1 70 GLN 70 95 95 GLN GLN A . n A 1 71 PHE 71 96 96 PHE PHE A . n A 1 72 VAL 72 97 97 VAL VAL A . n A 1 73 SER 73 98 98 SER SER A . n A 1 74 PHE 74 99 99 PHE PHE A . n A 1 75 SER 75 100 100 SER SER A . n A 1 76 VAL 76 101 101 VAL VAL A . n A 1 77 ASP 77 102 102 ASP ASP A . n A 1 78 PRO 78 103 103 PRO PRO A . n A 1 79 ASP 79 104 104 ASP ASP A . n A 1 80 LEU 80 105 105 LEU LEU A . n A 1 81 ASP 81 106 106 ASP ASP A . n A 1 82 LYS 82 107 107 LYS LYS A . n A 1 83 PRO 83 108 108 PRO PRO A . n A 1 84 GLU 84 109 109 GLU GLU A . n A 1 85 ASN 85 110 110 ASN ASN A . n A 1 86 LEU 86 111 111 LEU LEU A . n A 1 87 LYS 87 112 112 LYS LYS A . n A 1 88 ALA 88 113 113 ALA ALA A . n A 1 89 PHE 89 114 114 PHE PHE A . n A 1 90 ILE 90 115 115 ILE ILE A . n A 1 91 GLN 91 116 116 GLN GLN A . n A 1 92 LYS 92 117 117 LYS LYS A . n A 1 93 PHE 93 118 118 PHE PHE A . n A 1 94 THR 94 119 119 THR THR A . n A 1 95 GLU 95 120 120 GLU GLU A . n A 1 96 ASP 96 121 121 ASP ASP A . n A 1 97 THR 97 122 122 THR THR A . n A 1 98 SER 98 123 123 SER SER A . n A 1 99 ASN 99 124 124 ASN ASN A . n A 1 100 TRP 100 125 125 TRP TRP A . n A 1 101 ASN 101 126 126 ASN ASN A . n A 1 102 LEU 102 127 127 LEU LEU A . n A 1 103 LEU 103 128 128 LEU LEU A . n A 1 104 THR 104 129 129 THR THR A . n A 1 105 GLY 105 130 130 GLY GLY A . n A 1 106 TYR 106 131 131 TYR TYR A . n A 1 107 SER 107 132 132 SER SER A . n A 1 108 LEU 108 133 133 LEU LEU A . n A 1 109 GLU 109 134 134 GLU GLU A . n A 1 110 ASP 110 135 135 ASP ASP A . n A 1 111 ILE 111 136 136 ILE ILE A . n A 1 112 THR 112 137 137 THR THR A . n A 1 113 LYS 113 138 138 LYS LYS A . n A 1 114 PHE 114 139 139 PHE PHE A . n A 1 115 SER 115 140 140 SER SER A . n A 1 116 LYS 116 141 141 LYS LYS A . n A 1 117 ASP 117 142 142 ASP ASP A . n A 1 118 ASN 118 143 143 ASN ASN A . n A 1 119 PHE 119 144 144 PHE PHE A . n A 1 120 GLN 120 145 145 GLN GLN A . n A 1 121 SER 121 146 146 SER SER A . n A 1 122 LEU 122 147 147 LEU LEU A . n A 1 123 VAL 123 148 148 VAL VAL A . n A 1 124 ASP 124 149 149 ASP ASP A . n A 1 125 LYS 125 150 150 LYS LYS A . n A 1 126 PRO 126 151 151 PRO PRO A . n A 1 127 GLU 127 152 152 GLU GLU A . n A 1 128 ASN 128 153 153 ASN ASN A . n A 1 129 GLY 129 154 154 GLY GLY A . n A 1 130 GLN 130 155 155 GLN GLN A . n A 1 131 VAL 131 156 156 VAL VAL A . n A 1 132 ILE 132 157 157 ILE ILE A . n A 1 133 HIS 133 158 158 HIS HIS A . n A 1 134 GLY 134 159 159 GLY GLY A . n A 1 135 THR 135 160 160 THR THR A . n A 1 136 SER 136 161 161 SER SER A . n A 1 137 PHE 137 162 162 PHE PHE A . n A 1 138 TYR 138 163 163 TYR TYR A . n A 1 139 LEU 139 164 164 LEU LEU A . n A 1 140 ILE 140 165 165 ILE ILE A . n A 1 141 ASP 141 166 166 ASP ASP A . n A 1 142 GLN 142 167 167 GLN GLN A . n A 1 143 ASN 143 168 168 ASN ASN A . n A 1 144 GLY 144 169 169 GLY GLY A . n A 1 145 LYS 145 170 170 LYS LYS A . n A 1 146 VAL 146 171 171 VAL VAL A . n A 1 147 MSE 147 172 172 MSE MSE A . n A 1 148 LYS 148 173 173 LYS LYS A . n A 1 149 LYS 149 174 174 LYS LYS A . n A 1 150 TYR 150 175 175 TYR TYR A . n A 1 151 SER 151 176 176 SER SER A . n A 1 152 GLY 152 177 177 GLY GLY A . n A 1 153 ILE 153 178 178 ILE ILE A . n A 1 154 SER 154 179 179 SER SER A . n A 1 155 ASN 155 180 180 ASN ASN A . n A 1 156 THR 156 181 181 THR THR A . n A 1 157 PRO 157 182 182 PRO PRO A . n A 1 158 TYR 158 183 183 TYR TYR A . n A 1 159 GLU 159 184 184 GLU GLU A . n A 1 160 ASP 160 185 185 ASP ASP A . n A 1 161 ILE 161 186 186 ILE ILE A . n A 1 162 ILE 162 187 187 ILE ILE A . n A 1 163 ARG 163 188 188 ARG ARG A . n A 1 164 ASP 164 189 189 ASP ASP A . n A 1 165 MSE 165 190 190 MSE MSE A . n A 1 166 LYS 166 191 191 LYS LYS A . n A 1 167 ARG 167 192 192 ARG ARG A . n A 1 168 LEU 168 193 193 LEU LEU A . n A 1 169 ALA 169 194 194 ALA ALA A . n A 1 170 GLU 170 195 195 GLU GLU A . n # _pdbx_SG_project.id 1 _pdbx_SG_project.project_name 'NIAID, National Institute of Allergy and Infectious Diseases' _pdbx_SG_project.full_name_of_center 'Center for Structural Genomics of Infectious Diseases' _pdbx_SG_project.initial_of_center CSGID # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 40 A MSE 65 ? MET SELENOMETHIONINE 2 A MSE 51 A MSE 76 ? MET SELENOMETHIONINE 3 A MSE 55 A MSE 80 ? MET SELENOMETHIONINE 4 A MSE 61 A MSE 86 ? MET SELENOMETHIONINE 5 A MSE 147 A MSE 172 ? MET SELENOMETHIONINE 6 A MSE 165 A MSE 190 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2012-10-24 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 26.8879 25.3580 -18.8147 0.0620 0.0728 0.0669 0.0210 0.0017 -0.0058 3.6442 2.2887 1.8292 1.9794 -1.1531 -0.7712 -0.0626 -0.0016 -0.0957 -0.0274 0.0266 0.0056 0.0157 -0.0545 0.0528 'X-RAY DIFFRACTION' 2 ? refined 33.6121 24.9109 -8.0228 0.0877 0.1294 0.1057 -0.0016 0.0141 0.0016 1.1227 2.3491 1.7921 0.0639 0.4250 -0.0999 -0.0341 -0.0291 0.0448 0.1710 0.0056 -0.0218 -0.0415 0.0095 0.0229 'X-RAY DIFFRACTION' 3 ? refined 30.4560 34.8519 -10.9488 0.1204 0.1216 0.0800 -0.0016 0.0019 0.0017 1.1332 1.7623 0.7884 0.0805 -0.0509 0.1860 -0.0011 0.0221 0.1252 0.0355 0.0051 0.0396 -0.1157 -0.0229 0.0023 'X-RAY DIFFRACTION' 4 ? refined 25.4781 16.0233 -7.6433 0.1153 0.1333 0.1365 -0.0154 0.0236 0.0085 2.4496 2.0906 5.2730 0.4252 1.5112 0.4956 0.0333 -0.0714 -0.1040 0.0524 -0.0126 -0.0733 0.1504 -0.0924 -0.0067 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 28:55) ; 'X-RAY DIFFRACTION' 2 2 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 56:100) ; 'X-RAY DIFFRACTION' 3 3 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 101:165) ; 'X-RAY DIFFRACTION' 4 4 ? ? ? ? ? ? ? ? ? ;chain 'A' and (resseq 166:195) ; # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SBC-Collect 'data collection' . ? 1 SHELXD phasing . ? 2 MLPHARE phasing . ? 3 DM 'model building' . ? 4 ARP 'model building' . ? 5 WARP 'model building' . ? 6 HKL-3000 phasing . ? 7 PHENIX refinement '(phenix.refine: 1.7.1_743)' ? 8 HKL-3000 'data reduction' . ? 9 HKL-3000 'data scaling' . ? 10 DM phasing . ? 11 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 42 ? ? -113.65 -164.03 2 1 THR A 71 ? ? -125.32 -93.10 3 1 THR A 129 ? ? -164.29 -163.93 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A SER 26 ? A SER 1 2 1 Y 1 A ASN 27 ? A ASN 2 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 1 HOH HOH A . B 2 HOH 2 202 2 HOH HOH A . B 2 HOH 3 203 3 HOH HOH A . B 2 HOH 4 204 4 HOH HOH A . B 2 HOH 5 205 5 HOH HOH A . B 2 HOH 6 206 6 HOH HOH A . B 2 HOH 7 207 7 HOH HOH A . B 2 HOH 8 208 8 HOH HOH A . B 2 HOH 9 209 9 HOH HOH A . B 2 HOH 10 210 10 HOH HOH A . B 2 HOH 11 211 11 HOH HOH A . B 2 HOH 12 212 12 HOH HOH A . B 2 HOH 13 213 13 HOH HOH A . B 2 HOH 14 214 14 HOH HOH A . B 2 HOH 15 215 15 HOH HOH A . B 2 HOH 16 216 16 HOH HOH A . B 2 HOH 17 217 17 HOH HOH A . B 2 HOH 18 218 18 HOH HOH A . B 2 HOH 19 219 19 HOH HOH A . B 2 HOH 20 220 20 HOH HOH A . B 2 HOH 21 221 21 HOH HOH A . B 2 HOH 22 222 22 HOH HOH A . B 2 HOH 23 223 23 HOH HOH A . B 2 HOH 24 224 24 HOH HOH A . B 2 HOH 25 225 25 HOH HOH A . B 2 HOH 26 226 26 HOH HOH A . B 2 HOH 27 227 27 HOH HOH A . B 2 HOH 28 228 28 HOH HOH A . B 2 HOH 29 229 29 HOH HOH A . B 2 HOH 30 230 30 HOH HOH A . B 2 HOH 31 231 31 HOH HOH A . B 2 HOH 32 232 32 HOH HOH A . B 2 HOH 33 233 33 HOH HOH A . B 2 HOH 34 234 34 HOH HOH A . B 2 HOH 35 235 35 HOH HOH A . B 2 HOH 36 236 36 HOH HOH A . B 2 HOH 37 237 37 HOH HOH A . B 2 HOH 38 238 38 HOH HOH A . B 2 HOH 39 239 39 HOH HOH A . B 2 HOH 40 240 40 HOH HOH A . B 2 HOH 41 241 41 HOH HOH A . B 2 HOH 42 242 42 HOH HOH A . B 2 HOH 43 243 43 HOH HOH A . B 2 HOH 44 244 44 HOH HOH A . B 2 HOH 45 245 45 HOH HOH A . B 2 HOH 46 246 46 HOH HOH A . B 2 HOH 47 247 47 HOH HOH A . B 2 HOH 48 248 48 HOH HOH A . B 2 HOH 49 249 49 HOH HOH A . B 2 HOH 50 250 50 HOH HOH A . B 2 HOH 51 251 51 HOH HOH A . B 2 HOH 52 252 52 HOH HOH A . B 2 HOH 53 253 53 HOH HOH A . B 2 HOH 54 254 54 HOH HOH A . B 2 HOH 55 255 55 HOH HOH A . B 2 HOH 56 256 56 HOH HOH A . B 2 HOH 57 257 57 HOH HOH A . B 2 HOH 58 258 58 HOH HOH A . B 2 HOH 59 259 59 HOH HOH A . B 2 HOH 60 260 60 HOH HOH A . B 2 HOH 61 261 61 HOH HOH A . B 2 HOH 62 262 62 HOH HOH A . B 2 HOH 63 263 63 HOH HOH A . B 2 HOH 64 264 64 HOH HOH A . B 2 HOH 65 265 65 HOH HOH A . B 2 HOH 66 266 66 HOH HOH A . B 2 HOH 67 267 67 HOH HOH A . B 2 HOH 68 268 68 HOH HOH A . B 2 HOH 69 269 69 HOH HOH A . B 2 HOH 70 270 70 HOH HOH A . B 2 HOH 71 271 71 HOH HOH A . B 2 HOH 72 272 72 HOH HOH A . B 2 HOH 73 273 73 HOH HOH A . B 2 HOH 74 274 74 HOH HOH A . B 2 HOH 75 275 75 HOH HOH A . B 2 HOH 76 276 76 HOH HOH A . B 2 HOH 77 277 77 HOH HOH A . B 2 HOH 78 278 78 HOH HOH A . B 2 HOH 79 279 79 HOH HOH A . B 2 HOH 80 280 80 HOH HOH A . B 2 HOH 81 281 81 HOH HOH A . B 2 HOH 82 282 82 HOH HOH A . B 2 HOH 83 283 83 HOH HOH A . B 2 HOH 84 284 84 HOH HOH A . B 2 HOH 85 285 85 HOH HOH A . B 2 HOH 86 286 86 HOH HOH A . B 2 HOH 87 287 87 HOH HOH A . B 2 HOH 88 288 88 HOH HOH A . B 2 HOH 89 289 89 HOH HOH A . B 2 HOH 90 290 90 HOH HOH A . B 2 HOH 91 291 91 HOH HOH A . B 2 HOH 92 292 92 HOH HOH A . B 2 HOH 93 293 93 HOH HOH A . B 2 HOH 94 294 94 HOH HOH A . B 2 HOH 95 295 95 HOH HOH A . B 2 HOH 96 296 96 HOH HOH A . B 2 HOH 97 297 97 HOH HOH A . B 2 HOH 98 298 98 HOH HOH A . B 2 HOH 99 299 99 HOH HOH A . B 2 HOH 100 300 100 HOH HOH A . B 2 HOH 101 301 101 HOH HOH A . B 2 HOH 102 302 102 HOH HOH A . B 2 HOH 103 303 103 HOH HOH A . B 2 HOH 104 304 104 HOH HOH A . B 2 HOH 105 305 105 HOH HOH A . B 2 HOH 106 306 106 HOH HOH A . B 2 HOH 107 307 107 HOH HOH A . B 2 HOH 108 308 108 HOH HOH A . B 2 HOH 109 309 109 HOH HOH A . B 2 HOH 110 310 110 HOH HOH A . B 2 HOH 111 311 111 HOH HOH A . B 2 HOH 112 312 112 HOH HOH A . B 2 HOH 113 313 113 HOH HOH A . B 2 HOH 114 314 114 HOH HOH A . B 2 HOH 115 315 115 HOH HOH A . B 2 HOH 116 316 116 HOH HOH A . B 2 HOH 117 317 117 HOH HOH A . B 2 HOH 118 318 118 HOH HOH A . B 2 HOH 119 319 119 HOH HOH A . B 2 HOH 120 320 120 HOH HOH A . B 2 HOH 121 321 121 HOH HOH A . B 2 HOH 122 322 122 HOH HOH A . B 2 HOH 123 323 123 HOH HOH A . B 2 HOH 124 324 124 HOH HOH A . B 2 HOH 125 325 125 HOH HOH A . B 2 HOH 126 326 126 HOH HOH A . B 2 HOH 127 327 127 HOH HOH A . B 2 HOH 128 328 128 HOH HOH A . B 2 HOH 129 329 129 HOH HOH A . B 2 HOH 130 330 130 HOH HOH A . B 2 HOH 131 331 131 HOH HOH A . B 2 HOH 132 332 132 HOH HOH A . B 2 HOH 133 333 133 HOH HOH A . B 2 HOH 134 334 134 HOH HOH A . B 2 HOH 135 335 135 HOH HOH A . B 2 HOH 136 336 136 HOH HOH A . B 2 HOH 137 337 137 HOH HOH A . B 2 HOH 138 338 138 HOH HOH A . B 2 HOH 139 339 139 HOH HOH A . B 2 HOH 140 340 140 HOH HOH A . B 2 HOH 141 341 141 HOH HOH A . B 2 HOH 142 342 142 HOH HOH A . B 2 HOH 143 343 143 HOH HOH A . B 2 HOH 144 344 144 HOH HOH A . B 2 HOH 145 345 145 HOH HOH A . B 2 HOH 146 346 146 HOH HOH A . B 2 HOH 147 347 147 HOH HOH A . B 2 HOH 148 348 148 HOH HOH A . B 2 HOH 149 349 149 HOH HOH A . B 2 HOH 150 350 150 HOH HOH A . B 2 HOH 151 351 151 HOH HOH A . B 2 HOH 152 352 152 HOH HOH A . B 2 HOH 153 353 153 HOH HOH A . B 2 HOH 154 354 154 HOH HOH A . B 2 HOH 155 355 155 HOH HOH A . B 2 HOH 156 356 156 HOH HOH A . B 2 HOH 157 357 157 HOH HOH A . B 2 HOH 158 358 158 HOH HOH A . B 2 HOH 159 359 159 HOH HOH A . B 2 HOH 160 360 160 HOH HOH A . B 2 HOH 161 361 161 HOH HOH A . B 2 HOH 162 362 162 HOH HOH A . B 2 HOH 163 363 163 HOH HOH A . B 2 HOH 164 364 164 HOH HOH A . B 2 HOH 165 365 165 HOH HOH A . B 2 HOH 166 366 166 HOH HOH A . B 2 HOH 167 367 167 HOH HOH A . B 2 HOH 168 368 168 HOH HOH A . B 2 HOH 169 369 169 HOH HOH A . B 2 HOH 170 370 170 HOH HOH A . B 2 HOH 171 371 171 HOH HOH A . B 2 HOH 172 372 172 HOH HOH A . B 2 HOH 173 373 173 HOH HOH A . B 2 HOH 174 374 174 HOH HOH A . B 2 HOH 175 375 175 HOH HOH A . B 2 HOH 176 376 176 HOH HOH A . B 2 HOH 177 377 177 HOH HOH A . B 2 HOH 178 378 178 HOH HOH A . B 2 HOH 179 379 179 HOH HOH A . B 2 HOH 180 380 180 HOH HOH A . B 2 HOH 181 381 181 HOH HOH A . B 2 HOH 182 382 182 HOH HOH A . B 2 HOH 183 383 183 HOH HOH A . B 2 HOH 184 384 184 HOH HOH A . B 2 HOH 185 385 185 HOH HOH A . B 2 HOH 186 386 186 HOH HOH A . B 2 HOH 187 387 187 HOH HOH A . B 2 HOH 188 388 188 HOH HOH A . B 2 HOH 189 389 189 HOH HOH A . B 2 HOH 190 390 190 HOH HOH A . B 2 HOH 191 391 191 HOH HOH A . B 2 HOH 192 392 192 HOH HOH A . B 2 HOH 193 393 193 HOH HOH A . B 2 HOH 194 394 194 HOH HOH A . B 2 HOH 195 395 195 HOH HOH A . B 2 HOH 196 396 196 HOH HOH A . B 2 HOH 197 397 197 HOH HOH A . B 2 HOH 198 398 198 HOH HOH A . B 2 HOH 199 399 199 HOH HOH A . B 2 HOH 200 400 200 HOH HOH A . B 2 HOH 201 401 201 HOH HOH A . B 2 HOH 202 402 202 HOH HOH A . B 2 HOH 203 403 203 HOH HOH A . B 2 HOH 204 404 204 HOH HOH A . B 2 HOH 205 405 205 HOH HOH A . B 2 HOH 206 406 206 HOH HOH A . B 2 HOH 207 407 207 HOH HOH A . B 2 HOH 208 408 208 HOH HOH A . B 2 HOH 209 409 209 HOH HOH A . B 2 HOH 210 410 210 HOH HOH A . B 2 HOH 211 411 211 HOH HOH A . B 2 HOH 212 412 212 HOH HOH A . B 2 HOH 213 413 213 HOH HOH A . B 2 HOH 214 414 214 HOH HOH A . B 2 HOH 215 415 215 HOH HOH A . B 2 HOH 216 416 216 HOH HOH A . B 2 HOH 217 417 217 HOH HOH A . B 2 HOH 218 418 218 HOH HOH A . B 2 HOH 219 419 219 HOH HOH A . B 2 HOH 220 420 220 HOH HOH A . B 2 HOH 221 421 221 HOH HOH A . B 2 HOH 222 422 222 HOH HOH A . B 2 HOH 223 423 223 HOH HOH A . B 2 HOH 224 424 224 HOH HOH A . B 2 HOH 225 425 225 HOH HOH A . B 2 HOH 226 426 226 HOH HOH A . B 2 HOH 227 427 227 HOH HOH A . B 2 HOH 228 428 228 HOH HOH A . B 2 HOH 229 429 229 HOH HOH A . B 2 HOH 230 430 230 HOH HOH A . B 2 HOH 231 431 231 HOH HOH A . B 2 HOH 232 432 232 HOH HOH A . B 2 HOH 233 433 233 HOH HOH A . B 2 HOH 234 434 234 HOH HOH A . B 2 HOH 235 435 235 HOH HOH A . B 2 HOH 236 436 236 HOH HOH A . B 2 HOH 237 437 237 HOH HOH A . B 2 HOH 238 438 238 HOH HOH A . B 2 HOH 239 439 239 HOH HOH A . B 2 HOH 240 440 240 HOH HOH A . B 2 HOH 241 441 241 HOH HOH A . B 2 HOH 242 442 242 HOH HOH A . B 2 HOH 243 443 243 HOH HOH A . B 2 HOH 244 444 244 HOH HOH A . B 2 HOH 245 445 245 HOH HOH A . B 2 HOH 246 446 246 HOH HOH A . B 2 HOH 247 447 247 HOH HOH A . B 2 HOH 248 448 248 HOH HOH A . B 2 HOH 249 449 249 HOH HOH A . #