HEADER PROTEIN BINDING 02-OCT-12 4HDJ TITLE CRYSTAL STRUCTURE OF BAMB FROM PSEUDOMONAS AERUGINOSA COMPND MOL_ID: 1; COMPND 2 MOLECULE: OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMB; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: UNP RESIDUES 20-380; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS AERUGINOSA; SOURCE 3 ORGANISM_TAXID: 208964; SOURCE 4 STRAIN: ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228; SOURCE 5 GENE: BAMB, PA3800; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562 KEYWDS BETA-PROPELLER, BETA-BARREL ASSEMBLY, PROTEIN BINDING EXPDTA X-RAY DIFFRACTION AUTHOR K.B.JANSEN,S.L.BAKER,M.C.SOUSA REVDAT 2 28-FEB-24 4HDJ 1 SEQADV REVDAT 1 24-APR-13 4HDJ 0 JRNL AUTH K.B.JANSEN,S.L.BAKER,M.C.SOUSA JRNL TITL CRYSTAL STRUCTURE OF BAMB FROM PSEUDOMONAS AERUGINOSA AND JRNL TITL 2 FUNCTIONAL EVALUATION OF ITS CONSERVED STRUCTURAL FEATURES. JRNL REF PLOS ONE V. 7 49749 2012 JRNL REFN ESSN 1932-6203 JRNL PMID 23189157 JRNL DOI 10.1371/JOURNAL.PONE.0049749 REMARK 2 REMARK 2 RESOLUTION. 1.85 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX (PHENIX.REFINE: 1.8.1_1168) REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.85 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 36.00 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 28674 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.163 REMARK 3 R VALUE (WORKING SET) : 0.160 REMARK 3 FREE R VALUE : 0.205 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1463 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 36.0684 - 3.9794 0.97 2820 137 0.1413 0.1498 REMARK 3 2 3.9794 - 3.1592 0.99 2775 140 0.1472 0.2005 REMARK 3 3 3.1592 - 2.7600 0.99 2722 140 0.1725 0.2125 REMARK 3 4 2.7600 - 2.5077 1.00 2720 147 0.1794 0.2173 REMARK 3 5 2.5077 - 2.3280 1.00 2717 165 0.1615 0.2140 REMARK 3 6 2.3280 - 2.1908 1.00 2684 159 0.1679 0.2210 REMARK 3 7 2.1908 - 2.0811 1.00 2711 148 0.1631 0.2362 REMARK 3 8 2.0811 - 1.9905 1.00 2708 138 0.1673 0.2326 REMARK 3 9 1.9905 - 1.9139 1.00 2705 149 0.1830 0.2478 REMARK 3 10 1.9139 - 1.8478 0.99 2649 140 0.1863 0.2579 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.170 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 20.750 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : NULL REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.011 2687 REMARK 3 ANGLE : 1.565 3653 REMARK 3 CHIRALITY : 0.099 417 REMARK 3 PLANARITY : 0.008 478 REMARK 3 DIHEDRAL : 14.239 961 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 4 REMARK 3 TLS GROUP : 1 REMARK 3 SELECTION: ( CHAIN A AND RESID 28:157 ) REMARK 3 ORIGIN FOR THE GROUP (A): 20.7930 40.4677 13.9217 REMARK 3 T TENSOR REMARK 3 T11: 0.0619 T22: 0.1007 REMARK 3 T33: 0.1263 T12: -0.0178 REMARK 3 T13: 0.0320 T23: -0.0467 REMARK 3 L TENSOR REMARK 3 L11: 0.3883 L22: 0.3547 REMARK 3 L33: 0.0525 L12: -0.1163 REMARK 3 L13: 0.0519 L23: -0.1485 REMARK 3 S TENSOR REMARK 3 S11: -0.0551 S12: 0.1138 S13: -0.1720 REMARK 3 S21: -0.0659 S22: 0.0648 S23: -0.0992 REMARK 3 S31: 0.0010 S32: -0.0569 S33: 0.0252 REMARK 3 TLS GROUP : 2 REMARK 3 SELECTION: ( CHAIN A AND RESID 158:192 ) REMARK 3 ORIGIN FOR THE GROUP (A): 6.7561 41.8505 26.0627 REMARK 3 T TENSOR REMARK 3 T11: 0.1184 T22: 0.1219 REMARK 3 T33: 0.0792 T12: -0.0017 REMARK 3 T13: 0.0156 T23: 0.0211 REMARK 3 L TENSOR REMARK 3 L11: 0.1742 L22: 0.0642 REMARK 3 L33: 0.0328 L12: -0.0803 REMARK 3 L13: -0.0529 L23: 0.0444 REMARK 3 S TENSOR REMARK 3 S11: -0.0276 S12: 0.0515 S13: -0.1227 REMARK 3 S21: 0.1202 S22: 0.0214 S23: 0.1091 REMARK 3 S31: -0.0483 S32: 0.0387 S33: 0.0017 REMARK 3 TLS GROUP : 3 REMARK 3 SELECTION: ( CHAIN A AND RESID 193:281 ) REMARK 3 ORIGIN FOR THE GROUP (A): 15.1207 54.0552 31.5705 REMARK 3 T TENSOR REMARK 3 T11: 0.1503 T22: 0.1455 REMARK 3 T33: 0.0412 T12: -0.0314 REMARK 3 T13: -0.0000 T23: -0.0033 REMARK 3 L TENSOR REMARK 3 L11: 0.1903 L22: 0.1808 REMARK 3 L33: 0.0824 L12: 0.0505 REMARK 3 L13: -0.0785 L23: 0.0728 REMARK 3 S TENSOR REMARK 3 S11: 0.0469 S12: -0.0870 S13: 0.0745 REMARK 3 S21: 0.1023 S22: -0.0660 S23: 0.0422 REMARK 3 S31: -0.0419 S32: 0.0703 S33: -0.0158 REMARK 3 TLS GROUP : 4 REMARK 3 SELECTION: ( CHAIN A AND RESID 282:382 ) REMARK 3 ORIGIN FOR THE GROUP (A): 33.1339 55.9061 18.0465 REMARK 3 T TENSOR REMARK 3 T11: 0.0839 T22: 0.0941 REMARK 3 T33: 0.1127 T12: -0.0093 REMARK 3 T13: -0.0001 T23: -0.0332 REMARK 3 L TENSOR REMARK 3 L11: 0.2148 L22: 0.1489 REMARK 3 L33: 0.1960 L12: 0.0994 REMARK 3 L13: -0.1856 L23: -0.0116 REMARK 3 S TENSOR REMARK 3 S11: 0.0065 S12: 0.0177 S13: -0.0605 REMARK 3 S21: 0.0169 S22: -0.0699 S23: -0.0382 REMARK 3 S31: -0.0754 S32: 0.0073 S33: -0.0100 REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HDJ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 11-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075330. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 11-JUN-10 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 2 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.0 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : NULL REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 28674 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.850 REMARK 200 RESOLUTION RANGE LOW (A) : 36.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 42.20 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.13 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 10% TACSIMATE, 10% PEG , PH 7.0, VAPOR REMARK 280 DIFFUSION, HANGING DROP, TEMPERATURE 289.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 32 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+2/3 REMARK 290 3555 -X+Y,-X,Z+1/3 REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z+1/3 REMARK 290 6555 -X,-X+Y,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 55.58667 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 27.79333 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 27.79333 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 55.58667 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 504 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 513 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 540 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 694 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 764 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 16 REMARK 465 ALA A 17 REMARK 465 MET A 18 REMARK 465 ALA A 19 REMARK 465 SER A 20 REMARK 465 SER A 21 REMARK 465 ASN A 22 REMARK 465 SER A 23 REMARK 465 LYS A 24 REMARK 465 LYS A 25 REMARK 465 GLU A 26 REMARK 465 LEU A 27 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 THR A 175 OG1 CG2 REMARK 470 VAL A 176 CG1 CG2 REMARK 470 ARG A 225 CG CD NE CZ NH1 NH2 REMARK 470 SER A 226 OG REMARK 470 GLU A 227 CG CD OE1 OE2 REMARK 470 SER A 297 OG REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 O ALA A 190 O HOH A 577 1.88 REMARK 500 O ALA A 288 O HOH A 655 1.91 REMARK 500 O HOH A 749 O HOH A 756 1.92 REMARK 500 O HOH A 613 O HOH A 640 2.01 REMARK 500 O SER A 289 O ALA A 310 2.01 REMARK 500 O HOH A 614 O HOH A 787 2.03 REMARK 500 O HOH A 681 O HOH A 785 2.03 REMARK 500 O HOH A 715 O HOH A 717 2.04 REMARK 500 O HOH A 782 O HOH A 799 2.14 REMARK 500 O HOH A 649 O HOH A 655 2.15 REMARK 500 O LEU A 179 O HOH A 550 2.15 REMARK 500 NH2 ARG A 218 O HOH A 463 2.15 REMARK 500 NE ARG A 355 O HOH A 611 2.17 REMARK 500 O HOH A 619 O HOH A 710 2.17 REMARK 500 NH1 ARG A 133 O HOH A 428 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 182 NE - CZ - NH1 ANGL. DEV. = 4.8 DEGREES REMARK 500 ARG A 182 NE - CZ - NH2 ANGL. DEV. = -5.1 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 97 88.41 -58.68 REMARK 500 VAL A 102 116.32 -35.51 REMARK 500 ASP A 156 31.17 70.89 REMARK 500 THR A 175 -70.62 -21.69 REMARK 500 PRO A 177 -152.40 -95.26 REMARK 500 ALA A 190 -89.99 -97.40 REMARK 500 ARG A 225 -87.05 -83.33 REMARK 500 SER A 226 44.78 -42.49 REMARK 500 SER A 271 -130.61 -84.07 REMARK 500 LEU A 309 33.95 -90.41 REMARK 500 ALA A 310 -74.50 -31.47 REMARK 500 ARG A 311 40.81 -109.76 REMARK 500 GLN A 313 70.05 56.32 REMARK 500 SER A 321 -133.33 51.84 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: NON-CIS, NON-TRANS REMARK 500 REMARK 500 THE FOLLOWING PEPTIDE BONDS DEVIATE SIGNIFICANTLY FROM BOTH REMARK 500 CIS AND TRANS CONFORMATION. CIS BONDS, IF ANY, ARE LISTED REMARK 500 ON CISPEP RECORDS. TRANS IS DEFINED AS 180 +/- 30 AND REMARK 500 CIS IS DEFINED AS 0 +/- 30 DEGREES. REMARK 500 MODEL OMEGA REMARK 500 GLY A 101 VAL A 102 -81.63 REMARK 500 ARG A 225 SER A 226 -137.42 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: MAIN CHAIN PLANARITY REMARK 500 REMARK 500 THE FOLLOWING RESIDUES HAVE A PSEUDO PLANARITY REMARK 500 TORSION ANGLE, C(I) - CA(I) - N(I+1) - O(I), GREATER REMARK 500 10.0 DEGREES. (M=MODEL NUMBER; RES=RESIDUE NAME; REMARK 500 C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 500 I=INSERTION CODE). REMARK 500 REMARK 500 M RES CSSEQI ANGLE REMARK 500 GLY A 101 -10.66 REMARK 500 REMARK 500 REMARK: NULL DBREF 4HDJ A 20 380 UNP Q9HXJ7 BAMB_PSEAE 20 380 SEQADV 4HDJ GLY A 16 UNP Q9HXJ7 EXPRESSION TAG SEQADV 4HDJ ALA A 17 UNP Q9HXJ7 EXPRESSION TAG SEQADV 4HDJ MET A 18 UNP Q9HXJ7 EXPRESSION TAG SEQADV 4HDJ ALA A 19 UNP Q9HXJ7 EXPRESSION TAG SEQADV 4HDJ PRO A 381 UNP Q9HXJ7 EXPRESSION TAG SEQADV 4HDJ GLY A 382 UNP Q9HXJ7 EXPRESSION TAG SEQRES 1 A 367 GLY ALA MET ALA SER SER ASN SER LYS LYS GLU LEU PRO SEQRES 2 A 367 PRO ALA GLU LEU THR ASP PHE LYS GLU GLU VAL VAL LEU SEQRES 3 A 367 SER LYS GLN TRP SER ARG SER VAL GLY ASP GLY GLN GLY SEQRES 4 A 367 ASP LEU TYR ASN LEU LEU GLU PRO ALA VAL ASP GLY SER SEQRES 5 A 367 THR ILE TYR ALA ALA SER ALA GLU GLY ARG VAL MET ALA SEQRES 6 A 367 ILE GLN ARG GLU THR GLY ASP VAL LEU TRP LYS LYS ASP SEQRES 7 A 367 LEU GLU ARG PRO VAL SER GLY GLY VAL GLY VAL GLY TYR SEQRES 8 A 367 GLY LEU VAL LEU VAL GLY THR LEU ARG GLY ASP VAL ILE SEQRES 9 A 367 ALA LEU ASP GLU ALA THR GLY LYS LYS LYS TRP THR LYS SEQRES 10 A 367 ARG VAL ASN SER GLU VAL LEU SER ALA PRO ALA THR ASN SEQRES 11 A 367 GLY ASP VAL VAL VAL VAL GLN THR GLN ASP ASP LYS LEU SEQRES 12 A 367 ILE GLY LEU ASP ALA ALA SER GLY ASP GLN ARG TRP ILE SEQRES 13 A 367 TYR GLU SER THR VAL PRO VAL LEU THR LEU ARG GLY THR SEQRES 14 A 367 GLY ALA PRO LEU ILE ALA GLY ASN MET ALA LEU ALA GLY SEQRES 15 A 367 LEU ALA SER GLY LYS VAL VAL ALA VAL ASP VAL GLN ARG SEQRES 16 A 367 GLY LEU PRO ILE TRP GLU GLN ARG VAL ALA ILE PRO GLN SEQRES 17 A 367 GLY ARG SER GLU LEU ASP ARG VAL VAL ASP ILE ASP GLY SEQRES 18 A 367 GLY LEU LEU LEU SER GLY ASP THR LEU TYR VAL VAL SER SEQRES 19 A 367 TYR GLN GLY ARG ALA ALA ALA LEU ASP VAL ASN SER GLY SEQRES 20 A 367 ARG LEU LEU TRP GLN ARG GLU ALA SER SER TYR VAL GLY SEQRES 21 A 367 VAL ALA GLU GLY PHE GLY ASN ILE TYR VAL SER GLN ALA SEQRES 22 A 367 SER GLY SER VAL GLU GLY LEU ASP SER ARG GLY ALA SER SEQRES 23 A 367 SER LEU TRP ASN ASN ASP ALA LEU ALA ARG ARG GLN LEU SEQRES 24 A 367 SER ALA PRO ALA VAL PHE SER SER ASN VAL VAL VAL GLY SEQRES 25 A 367 ASP LEU GLU GLY TYR VAL HIS LEU LEU SER GLN VAL ASP SEQRES 26 A 367 GLY ARG PHE VAL GLY ARG GLU ARG VAL ASP SER ASP GLY SEQRES 27 A 367 VAL ARG VAL ARG PRO LEU VAL VAL GLY SER TRP MET TYR SEQRES 28 A 367 VAL PHE GLY ASN GLY GLY LYS LEU VAL ALA TYR THR ILE SEQRES 29 A 367 ARG PRO GLY FORMUL 2 HOH *402(H2 O) SHEET 1 A 4 LEU A 41 SER A 48 0 SHEET 2 A 4 LYS A 373 ILE A 379 -1 O THR A 378 N SER A 42 SHEET 3 A 4 TRP A 364 PHE A 368 -1 N MET A 365 O TYR A 377 SHEET 4 A 4 LEU A 359 VAL A 361 -1 N VAL A 361 O TRP A 364 SHEET 1 B 4 ALA A 63 ASP A 65 0 SHEET 2 B 4 THR A 68 ALA A 72 -1 O TYR A 70 N ALA A 63 SHEET 3 B 4 ARG A 77 GLN A 82 -1 O ILE A 81 N ILE A 69 SHEET 4 B 4 VAL A 88 ASP A 93 -1 O LEU A 89 N ALA A 80 SHEET 1 C 4 VAL A 98 GLY A 105 0 SHEET 2 C 4 LEU A 108 THR A 113 -1 O LEU A 110 N GLY A 103 SHEET 3 C 4 ASP A 117 ASP A 122 -1 O LEU A 121 N VAL A 109 SHEET 4 C 4 LYS A 128 ARG A 133 -1 O LYS A 129 N ALA A 120 SHEET 1 D 4 ALA A 143 THR A 144 0 SHEET 2 D 4 VAL A 148 GLN A 152 -1 O VAL A 150 N ALA A 143 SHEET 3 D 4 LYS A 157 ASP A 162 -1 O ILE A 159 N VAL A 151 SHEET 4 D 4 GLN A 168 GLU A 173 -1 O ARG A 169 N GLY A 160 SHEET 1 E 2 LEU A 181 GLY A 183 0 SHEET 2 E 2 VAL A 232 ILE A 234 1 O ILE A 234 N ARG A 182 SHEET 1 F 4 LEU A 188 ILE A 189 0 SHEET 2 F 4 MET A 193 GLY A 197 -1 O LEU A 195 N LEU A 188 SHEET 3 F 4 LYS A 202 ASP A 207 -1 O VAL A 204 N ALA A 196 SHEET 4 F 4 PRO A 213 ARG A 218 -1 O ILE A 214 N ALA A 205 SHEET 1 G 4 LEU A 238 SER A 241 0 SHEET 2 G 4 THR A 244 VAL A 247 -1 O TYR A 246 N LEU A 239 SHEET 3 G 4 ARG A 253 ASP A 258 -1 O ALA A 255 N VAL A 247 SHEET 4 G 4 LEU A 264 GLU A 269 -1 O ARG A 268 N ALA A 254 SHEET 1 H 4 GLY A 275 GLY A 279 0 SHEET 2 H 4 ASN A 282 GLN A 287 -1 O TYR A 284 N ALA A 277 SHEET 3 H 4 SER A 291 ASP A 296 -1 O LEU A 295 N ILE A 283 SHEET 4 H 4 SER A 302 ASN A 306 -1 O LEU A 303 N GLY A 294 SHEET 1 I 4 ALA A 318 PHE A 320 0 SHEET 2 I 4 ASN A 323 GLY A 327 -1 O VAL A 325 N ALA A 318 SHEET 3 I 4 TYR A 332 SER A 337 -1 O LEU A 336 N VAL A 324 SHEET 4 I 4 PHE A 343 ARG A 348 -1 O VAL A 344 N LEU A 335 CISPEP 1 THR A 175 VAL A 176 0 -10.15 CISPEP 2 PRO A 177 VAL A 178 0 -5.91 CISPEP 3 GLN A 251 GLY A 252 0 -9.89 CISPEP 4 SER A 271 SER A 272 0 -8.95 CISPEP 5 ARG A 380 PRO A 381 0 6.72 CRYST1 82.984 82.984 83.380 90.00 90.00 120.00 P 32 2 1 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.012051 0.006957 0.000000 0.00000 SCALE2 0.000000 0.013915 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011993 0.00000