data_4HH8 # _entry.id 4HH8 # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.281 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4HH8 RCSB RCSB075463 WWPDB D_1000075463 # _pdbx_database_status.entry_id 4HH8 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-10-09 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Eichinger, A.' 1 'Skerra, A.' 2 # _citation.id primary _citation.title 'The extracellular region of bovine butyrophilin exhibits high structural similarity to human myelin oligodendrocyte glycoprotein' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Eichinger, A.' 1 primary 'Neumaier, I.' 2 primary 'Skerra, A.' 3 # _cell.length_a 73.180 _cell.length_b 101.020 _cell.length_c 44.310 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 90.000 _cell.entry_id 4HH8 _cell.pdbx_unique_axis ? _cell.Z_PDB 4 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 21 21 2' _symmetry.entry_id 4HH8 _symmetry.Int_Tables_number 18 _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Butyrophilin subfamily 1 member A1' 25279.395 1 ? C193A ? ? 2 water nat water 18.015 55 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name BT # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;ASWSHPQFEKGAAPFDVIGPPEPILAVVGEDAELPCRLSPNVSAKG(MSE)ELRWFREKVSPAVFLSREGQEQEGEE (MSE)AEYRGRVSLVEDHIAEGSVAVRIQEVKASDDGEYRCFFRQDENYEEAIVHLKVAALGSDPHIS(MSE)KVQESGE IQLECTSVGWYPEPQVQWQTHRGEEFPS(MSE)SESRNPDEEGLFTVRASVIIRDSS(MSE)KNVSCAIRNLLLGQEKEV EVSIPAS ; _entity_poly.pdbx_seq_one_letter_code_can ;ASWSHPQFEKGAAPFDVIGPPEPILAVVGEDAELPCRLSPNVSAKGMELRWFREKVSPAVFLSREGQEQEGEEMAEYRGR VSLVEDHIAEGSVAVRIQEVKASDDGEYRCFFRQDENYEEAIVHLKVAALGSDPHISMKVQESGEIQLECTSVGWYPEPQ VQWQTHRGEEFPSMSESRNPDEEGLFTVRASVIIRDSSMKNVSCAIRNLLLGQEKEVEVSIPAS ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 ALA n 1 2 SER n 1 3 TRP n 1 4 SER n 1 5 HIS n 1 6 PRO n 1 7 GLN n 1 8 PHE n 1 9 GLU n 1 10 LYS n 1 11 GLY n 1 12 ALA n 1 13 ALA n 1 14 PRO n 1 15 PHE n 1 16 ASP n 1 17 VAL n 1 18 ILE n 1 19 GLY n 1 20 PRO n 1 21 PRO n 1 22 GLU n 1 23 PRO n 1 24 ILE n 1 25 LEU n 1 26 ALA n 1 27 VAL n 1 28 VAL n 1 29 GLY n 1 30 GLU n 1 31 ASP n 1 32 ALA n 1 33 GLU n 1 34 LEU n 1 35 PRO n 1 36 CYS n 1 37 ARG n 1 38 LEU n 1 39 SER n 1 40 PRO n 1 41 ASN n 1 42 VAL n 1 43 SER n 1 44 ALA n 1 45 LYS n 1 46 GLY n 1 47 MSE n 1 48 GLU n 1 49 LEU n 1 50 ARG n 1 51 TRP n 1 52 PHE n 1 53 ARG n 1 54 GLU n 1 55 LYS n 1 56 VAL n 1 57 SER n 1 58 PRO n 1 59 ALA n 1 60 VAL n 1 61 PHE n 1 62 LEU n 1 63 SER n 1 64 ARG n 1 65 GLU n 1 66 GLY n 1 67 GLN n 1 68 GLU n 1 69 GLN n 1 70 GLU n 1 71 GLY n 1 72 GLU n 1 73 GLU n 1 74 MSE n 1 75 ALA n 1 76 GLU n 1 77 TYR n 1 78 ARG n 1 79 GLY n 1 80 ARG n 1 81 VAL n 1 82 SER n 1 83 LEU n 1 84 VAL n 1 85 GLU n 1 86 ASP n 1 87 HIS n 1 88 ILE n 1 89 ALA n 1 90 GLU n 1 91 GLY n 1 92 SER n 1 93 VAL n 1 94 ALA n 1 95 VAL n 1 96 ARG n 1 97 ILE n 1 98 GLN n 1 99 GLU n 1 100 VAL n 1 101 LYS n 1 102 ALA n 1 103 SER n 1 104 ASP n 1 105 ASP n 1 106 GLY n 1 107 GLU n 1 108 TYR n 1 109 ARG n 1 110 CYS n 1 111 PHE n 1 112 PHE n 1 113 ARG n 1 114 GLN n 1 115 ASP n 1 116 GLU n 1 117 ASN n 1 118 TYR n 1 119 GLU n 1 120 GLU n 1 121 ALA n 1 122 ILE n 1 123 VAL n 1 124 HIS n 1 125 LEU n 1 126 LYS n 1 127 VAL n 1 128 ALA n 1 129 ALA n 1 130 LEU n 1 131 GLY n 1 132 SER n 1 133 ASP n 1 134 PRO n 1 135 HIS n 1 136 ILE n 1 137 SER n 1 138 MSE n 1 139 LYS n 1 140 VAL n 1 141 GLN n 1 142 GLU n 1 143 SER n 1 144 GLY n 1 145 GLU n 1 146 ILE n 1 147 GLN n 1 148 LEU n 1 149 GLU n 1 150 CYS n 1 151 THR n 1 152 SER n 1 153 VAL n 1 154 GLY n 1 155 TRP n 1 156 TYR n 1 157 PRO n 1 158 GLU n 1 159 PRO n 1 160 GLN n 1 161 VAL n 1 162 GLN n 1 163 TRP n 1 164 GLN n 1 165 THR n 1 166 HIS n 1 167 ARG n 1 168 GLY n 1 169 GLU n 1 170 GLU n 1 171 PHE n 1 172 PRO n 1 173 SER n 1 174 MSE n 1 175 SER n 1 176 GLU n 1 177 SER n 1 178 ARG n 1 179 ASN n 1 180 PRO n 1 181 ASP n 1 182 GLU n 1 183 GLU n 1 184 GLY n 1 185 LEU n 1 186 PHE n 1 187 THR n 1 188 VAL n 1 189 ARG n 1 190 ALA n 1 191 SER n 1 192 VAL n 1 193 ILE n 1 194 ILE n 1 195 ARG n 1 196 ASP n 1 197 SER n 1 198 SER n 1 199 MSE n 1 200 LYS n 1 201 ASN n 1 202 VAL n 1 203 SER n 1 204 CYS n 1 205 ALA n 1 206 ILE n 1 207 ARG n 1 208 ASN n 1 209 LEU n 1 210 LEU n 1 211 LEU n 1 212 GLY n 1 213 GLN n 1 214 GLU n 1 215 LYS n 1 216 GLU n 1 217 VAL n 1 218 GLU n 1 219 VAL n 1 220 SER n 1 221 ILE n 1 222 PRO n 1 223 ALA n 1 224 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name cow _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'BTN, BTN1A1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Bos taurus' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9913 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain JM83 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type ? _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name ? _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code BT1A1_BOVIN _struct_ref.pdbx_db_accession P18892 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;SAPFDVIGPQEPILAVVGEDAELPCRLSPNVSAKGMELRWFREKVSPAVFVSREGQEQEGEEMAEYRGRVSLVEDHIAEG SVAVRIQEVKASDDGEYRCFFRQDENYEEAIVHLKVAALGSDPHISMKVQESGEIQLECTSVGWYPEPQVQWRTHRGEEF PSMSESRNPDEEGLFTVRASVIIRDSSMKNVSCCIRNLLLGQEKEVEVSIPAS ; _struct_ref.pdbx_align_begin 26 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4HH8 _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 224 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession P18892 _struct_ref_seq.db_align_beg 26 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 238 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg -8 _struct_ref_seq.pdbx_auth_seq_align_end 212 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4HH8 ALA A 1 ? UNP P18892 ? ? 'EXPRESSION TAG' -11 1 1 4HH8 SER A 2 ? UNP P18892 ? ? 'EXPRESSION TAG' -10 2 1 4HH8 TRP A 3 ? UNP P18892 ? ? 'EXPRESSION TAG' -9 3 1 4HH8 SER A 4 ? UNP P18892 ? ? 'EXPRESSION TAG' -8 4 1 4HH8 HIS A 5 ? UNP P18892 ? ? 'EXPRESSION TAG' -7 5 1 4HH8 PRO A 6 ? UNP P18892 ? ? 'EXPRESSION TAG' -6 6 1 4HH8 GLN A 7 ? UNP P18892 ? ? 'EXPRESSION TAG' -5 7 1 4HH8 PHE A 8 ? UNP P18892 ? ? 'EXPRESSION TAG' -4 8 1 4HH8 GLU A 9 ? UNP P18892 ? ? 'EXPRESSION TAG' -3 9 1 4HH8 LYS A 10 ? UNP P18892 ? ? 'EXPRESSION TAG' -2 10 1 4HH8 GLY A 11 ? UNP P18892 ? ? 'EXPRESSION TAG' -1 11 1 4HH8 ALA A 12 ? UNP P18892 ? ? 'EXPRESSION TAG' 0 12 1 4HH8 PRO A 21 ? UNP P18892 GLN 35 'SEE REMARK 999' 9 13 1 4HH8 LEU A 62 ? UNP P18892 VAL 76 'SEE REMARK 999' 50 14 1 4HH8 GLN A 164 ? UNP P18892 ARG 178 'SEE REMARK 999' 152 15 1 4HH8 ALA A 205 ? UNP P18892 CYS 219 'ENGINEERED MUTATION' 193 16 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4HH8 _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.24 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 62.03 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details '1.5 M potassium phosphate, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 225 mm CCD' _diffrn_detector.pdbx_collection_date 2009-12-15 _diffrn_detector.details mirrors # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.monochromator 'Si 111 CRYSTAL' _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.97973 1.0 2 0.97985 1.0 3 0.96863 1.0 4 0.99188 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'BESSY BEAMLINE 14.1' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.97973,0.97985,0.96863,0.99188 _diffrn_source.pdbx_synchrotron_site BESSY _diffrn_source.pdbx_synchrotron_beamline 14.1 # _reflns.entry_id 4HH8 _reflns.d_resolution_high 2.300 _reflns.d_resolution_low 59.264 _reflns.number_all 15058 _reflns.number_obs 15058 _reflns.pdbx_netI_over_sigmaI 16.700 _reflns.pdbx_Rsym_value 0.059 _reflns.pdbx_redundancy 7.100 _reflns.percent_possible_obs 99.300 _reflns.observed_criterion_sigma_F 2.0 _reflns.observed_criterion_sigma_I 2.0 _reflns.pdbx_Rmerge_I_obs ? _reflns.B_iso_Wilson_estimate ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.300 2.420 ? 15391 ? 0.301 2.500 0.301 ? 7.200 ? 2130 99.100 1 1 2.420 2.570 ? 14812 ? 0.210 3.600 0.210 ? 7.200 ? 2054 99.200 2 1 2.570 2.750 ? 13861 ? 0.155 4.600 0.155 ? 7.200 ? 1919 99.200 3 1 2.750 2.970 ? 13027 ? 0.100 7.000 0.100 ? 7.200 ? 1810 99.500 4 1 2.970 3.250 ? 11882 ? 0.071 9.500 0.071 ? 7.200 ? 1655 99.700 5 1 3.250 3.640 ? 10914 ? 0.055 11.900 0.055 ? 7.200 ? 1525 99.600 6 1 3.640 4.200 ? 9451 ? 0.050 12.500 0.050 ? 7.100 ? 1337 99.700 7 1 4.200 5.140 ? 8164 ? 0.053 10.500 0.053 ? 7.000 ? 1165 99.600 8 1 5.140 7.270 ? 6373 ? 0.042 13.900 0.042 ? 6.800 ? 935 99.600 9 1 7.270 37.903 ? 3215 ? 0.025 24.500 0.025 ? 6.100 ? 528 96.900 10 1 # _refine.entry_id 4HH8 _refine.ls_d_res_high 2.3000 _refine.ls_d_res_low 59.2600 _refine.pdbx_ls_sigma_F 2.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 98.9200 _refine.ls_number_reflns_obs 14285 _refine.ls_number_reflns_all 15094 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details ? _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.2282 _refine.ls_R_factor_R_work 0.2256 _refine.ls_wR_factor_R_work 0.2323 _refine.ls_R_factor_R_free 0.2784 _refine.ls_wR_factor_R_free 0.2848 _refine.ls_percent_reflns_R_free 5.0000 _refine.ls_number_reflns_R_free 756 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 42.1194 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] -0.3800 _refine.aniso_B[2][2] 0.0600 _refine.aniso_B[3][3] 0.3300 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] 0.0000 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9350 _refine.correlation_coeff_Fo_to_Fc_free 0.9070 _refine.overall_SU_R_Cruickshank_DPI 0.2541 _refine.overall_SU_R_free 0.2263 _refine.pdbx_overall_ESU_R 0.2540 _refine.pdbx_overall_ESU_R_Free 0.2260 _refine.overall_SU_ML 0.1460 _refine.overall_SU_B 5.7770 _refine.solvent_model_details MASK _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set 0.8146 _refine.B_iso_max 90.500 _refine.B_iso_min 21.090 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 1.000 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1656 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 55 _refine_hist.number_atoms_total 1711 _refine_hist.d_res_high 2.3000 _refine_hist.d_res_low 59.2600 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 1691 0.016 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 2290 1.630 1.964 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 210 7.092 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 86 40.889 24.651 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 292 19.244 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 14 16.569 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 245 0.105 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 1313 0.008 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1053 1.153 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 1702 2.224 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 638 3.078 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 588 5.405 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.3000 _refine_ls_shell.d_res_low 2.3600 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 98.8300 _refine_ls_shell.number_reflns_R_work 1044 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2650 _refine_ls_shell.R_factor_R_free 0.3140 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 50 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 1094 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4HH8 _struct.title 'Crystal structure of bovine butyrophilin' _struct.pdbx_descriptor 'Butyrophilin subfamily 1 member A1' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4HH8 _struct_keywords.pdbx_keywords 'PROTEIN BINDING' _struct_keywords.text 'Immunoglobulin Fold, milk fat globule, PROTEIN BINDING' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 70 ? GLU A 73 ? GLU A 58 GLU A 61 5 ? 4 HELX_P HELX_P2 2 ILE A 88 ? GLU A 90 ? ILE A 76 GLU A 78 5 ? 3 HELX_P HELX_P3 3 LYS A 101 ? ASP A 105 ? LYS A 89 ASP A 93 5 ? 5 HELX_P HELX_P4 4 GLU A 142 ? GLY A 144 ? GLU A 130 GLY A 132 5 ? 3 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order disulf1 disulf ? ? A CYS 36 SG ? ? ? 1_555 A CYS 110 SG ? ? A CYS 24 A CYS 98 1_555 ? ? ? ? ? ? ? 2.054 ? disulf2 disulf ? ? A CYS 150 SG ? ? ? 1_555 A CYS 204 SG ? ? A CYS 138 A CYS 192 1_555 ? ? ? ? ? ? ? 2.123 ? covale1 covale ? ? A GLY 46 C ? ? ? 1_555 A MSE 47 N ? ? A GLY 34 A MSE 35 1_555 ? ? ? ? ? ? ? 1.331 ? covale2 covale ? ? A MSE 47 C ? ? ? 1_555 A GLU 48 N ? ? A MSE 35 A GLU 36 1_555 ? ? ? ? ? ? ? 1.315 ? covale3 covale ? ? A GLU 73 C ? ? ? 1_555 A MSE 74 N ? ? A GLU 61 A MSE 62 1_555 ? ? ? ? ? ? ? 1.329 ? covale4 covale ? ? A MSE 74 C ? ? ? 1_555 A ALA 75 N ? ? A MSE 62 A ALA 63 1_555 ? ? ? ? ? ? ? 1.337 ? covale5 covale ? ? A SER 137 C ? ? ? 1_555 A MSE 138 N ? ? A SER 125 A MSE 126 1_555 ? ? ? ? ? ? ? 1.330 ? covale6 covale ? ? A MSE 138 C ? ? ? 1_555 A LYS 139 N ? ? A MSE 126 A LYS 127 1_555 ? ? ? ? ? ? ? 1.323 ? covale7 covale ? ? A SER 173 C ? ? ? 1_555 A MSE 174 N ? ? A SER 161 A MSE 162 1_555 ? ? ? ? ? ? ? 1.326 ? covale8 covale ? ? A MSE 174 C ? ? ? 1_555 A SER 175 N ? ? A MSE 162 A SER 163 1_555 ? ? ? ? ? ? ? 1.331 ? covale9 covale ? ? A SER 198 C ? ? ? 1_555 A MSE 199 N ? ? A SER 186 A MSE 187 1_555 ? ? ? ? ? ? ? 1.329 ? covale10 covale ? ? A MSE 199 C ? ? ? 1_555 A LYS 200 N ? ? A MSE 187 A LYS 188 1_555 ? ? ? ? ? ? ? 1.330 ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? covale ? ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 SER 39 A . ? SER 27 A PRO 40 A ? PRO 28 A 1 0.74 2 SER 57 A . ? SER 45 A PRO 58 A ? PRO 46 A 1 -2.08 3 TYR 156 A . ? TYR 144 A PRO 157 A ? PRO 145 A 1 -5.24 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 6 ? C ? 4 ? D ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? anti-parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ASP A 16 ? ILE A 18 ? ASP A 4 ILE A 6 A 2 ALA A 32 ? SER A 39 ? ALA A 20 SER A 27 A 3 SER A 92 ? ILE A 97 ? SER A 80 ILE A 85 A 4 VAL A 81 ? HIS A 87 ? VAL A 69 HIS A 75 B 1 ILE A 24 ? VAL A 27 ? ILE A 12 VAL A 15 B 2 ASN A 117 ? ALA A 128 ? ASN A 105 ALA A 116 B 3 GLY A 106 ? GLN A 114 ? GLY A 94 GLN A 102 B 4 GLU A 48 ? PHE A 52 ? GLU A 36 PHE A 40 B 5 PHE A 61 ? ARG A 64 ? PHE A 49 ARG A 52 B 6 GLN A 67 ? GLU A 68 ? GLN A 55 GLU A 56 C 1 HIS A 135 ? VAL A 140 ? HIS A 123 VAL A 128 C 2 ILE A 146 ? TRP A 155 ? ILE A 134 TRP A 143 C 3 PHE A 186 ? ILE A 194 ? PHE A 174 ILE A 182 C 4 SER A 175 ? PRO A 180 ? SER A 163 PRO A 168 D 1 GLU A 170 ? PHE A 171 ? GLU A 158 PHE A 159 D 2 GLN A 160 ? THR A 165 ? GLN A 148 THR A 153 D 3 ASN A 201 ? ASN A 208 ? ASN A 189 ASN A 196 D 4 GLN A 213 ? SER A 220 ? GLN A 201 SER A 208 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASP A 16 ? N ASP A 4 O SER A 39 ? O SER A 27 A 2 3 N ALA A 32 ? N ALA A 20 O ILE A 97 ? O ILE A 85 A 3 4 O ALA A 94 ? O ALA A 82 N VAL A 84 ? N VAL A 72 B 1 2 N ILE A 24 ? N ILE A 12 O LYS A 126 ? O LYS A 114 B 2 3 O VAL A 123 ? O VAL A 111 N TYR A 108 ? N TYR A 96 B 3 4 O PHE A 111 ? O PHE A 99 N ARG A 50 ? N ARG A 38 B 4 5 N TRP A 51 ? N TRP A 39 O PHE A 61 ? O PHE A 49 B 5 6 N ARG A 64 ? N ARG A 52 O GLN A 67 ? O GLN A 55 C 1 2 N SER A 137 ? N SER A 125 O GLU A 149 ? O GLU A 137 C 2 3 N ILE A 146 ? N ILE A 134 O ILE A 194 ? O ILE A 182 C 3 4 O ARG A 189 ? O ARG A 177 N SER A 177 ? N SER A 165 D 1 2 O PHE A 171 ? O PHE A 159 N TRP A 163 ? N TRP A 151 D 2 3 N GLN A 160 ? N GLN A 148 O ARG A 207 ? O ARG A 195 D 3 4 N ASN A 208 ? N ASN A 196 O GLN A 213 ? O GLN A 201 # _atom_sites.entry_id 4HH8 _atom_sites.fract_transf_matrix[1][1] 0.013665 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009899 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.022568 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 ALA 1 -11 ? ? ? A . n A 1 2 SER 2 -10 ? ? ? A . n A 1 3 TRP 3 -9 ? ? ? A . n A 1 4 SER 4 -8 ? ? ? A . n A 1 5 HIS 5 -7 ? ? ? A . n A 1 6 PRO 6 -6 ? ? ? A . n A 1 7 GLN 7 -5 ? ? ? A . n A 1 8 PHE 8 -4 ? ? ? A . n A 1 9 GLU 9 -3 ? ? ? A . n A 1 10 LYS 10 -2 ? ? ? A . n A 1 11 GLY 11 -1 ? ? ? A . n A 1 12 ALA 12 0 ? ? ? A . n A 1 13 ALA 13 1 1 ALA ALA A . n A 1 14 PRO 14 2 2 PRO PRO A . n A 1 15 PHE 15 3 3 PHE PHE A . n A 1 16 ASP 16 4 4 ASP ASP A . n A 1 17 VAL 17 5 5 VAL VAL A . n A 1 18 ILE 18 6 6 ILE ILE A . n A 1 19 GLY 19 7 7 GLY GLY A . n A 1 20 PRO 20 8 8 PRO PRO A . n A 1 21 PRO 21 9 9 PRO PRO A . n A 1 22 GLU 22 10 10 GLU GLU A . n A 1 23 PRO 23 11 11 PRO PRO A . n A 1 24 ILE 24 12 12 ILE ILE A . n A 1 25 LEU 25 13 13 LEU LEU A . n A 1 26 ALA 26 14 14 ALA ALA A . n A 1 27 VAL 27 15 15 VAL VAL A . n A 1 28 VAL 28 16 16 VAL VAL A . n A 1 29 GLY 29 17 17 GLY GLY A . n A 1 30 GLU 30 18 18 GLU GLU A . n A 1 31 ASP 31 19 19 ASP ASP A . n A 1 32 ALA 32 20 20 ALA ALA A . n A 1 33 GLU 33 21 21 GLU GLU A . n A 1 34 LEU 34 22 22 LEU LEU A . n A 1 35 PRO 35 23 23 PRO PRO A . n A 1 36 CYS 36 24 24 CYS CYS A . n A 1 37 ARG 37 25 25 ARG ARG A . n A 1 38 LEU 38 26 26 LEU LEU A . n A 1 39 SER 39 27 27 SER SER A . n A 1 40 PRO 40 28 28 PRO PRO A . n A 1 41 ASN 41 29 29 ASN ASN A . n A 1 42 VAL 42 30 30 VAL VAL A . n A 1 43 SER 43 31 31 SER SER A . n A 1 44 ALA 44 32 32 ALA ALA A . n A 1 45 LYS 45 33 33 LYS LYS A . n A 1 46 GLY 46 34 34 GLY GLY A . n A 1 47 MSE 47 35 35 MSE MSE A . n A 1 48 GLU 48 36 36 GLU GLU A . n A 1 49 LEU 49 37 37 LEU LEU A . n A 1 50 ARG 50 38 38 ARG ARG A . n A 1 51 TRP 51 39 39 TRP TRP A . n A 1 52 PHE 52 40 40 PHE PHE A . n A 1 53 ARG 53 41 41 ARG ARG A . n A 1 54 GLU 54 42 42 GLU GLU A . n A 1 55 LYS 55 43 43 LYS LYS A . n A 1 56 VAL 56 44 44 VAL VAL A . n A 1 57 SER 57 45 45 SER SER A . n A 1 58 PRO 58 46 46 PRO PRO A . n A 1 59 ALA 59 47 47 ALA ALA A . n A 1 60 VAL 60 48 48 VAL VAL A . n A 1 61 PHE 61 49 49 PHE PHE A . n A 1 62 LEU 62 50 50 LEU LEU A . n A 1 63 SER 63 51 51 SER SER A . n A 1 64 ARG 64 52 52 ARG ARG A . n A 1 65 GLU 65 53 53 GLU GLU A . n A 1 66 GLY 66 54 54 GLY GLY A . n A 1 67 GLN 67 55 55 GLN GLN A . n A 1 68 GLU 68 56 56 GLU GLU A . n A 1 69 GLN 69 57 57 GLN GLN A . n A 1 70 GLU 70 58 58 GLU GLU A . n A 1 71 GLY 71 59 59 GLY GLY A . n A 1 72 GLU 72 60 60 GLU GLU A . n A 1 73 GLU 73 61 61 GLU GLU A . n A 1 74 MSE 74 62 62 MSE MSE A . n A 1 75 ALA 75 63 63 ALA ALA A . n A 1 76 GLU 76 64 64 GLU GLU A . n A 1 77 TYR 77 65 65 TYR TYR A . n A 1 78 ARG 78 66 66 ARG ARG A . n A 1 79 GLY 79 67 67 GLY GLY A . n A 1 80 ARG 80 68 68 ARG ARG A . n A 1 81 VAL 81 69 69 VAL VAL A . n A 1 82 SER 82 70 70 SER SER A . n A 1 83 LEU 83 71 71 LEU LEU A . n A 1 84 VAL 84 72 72 VAL VAL A . n A 1 85 GLU 85 73 73 GLU GLU A . n A 1 86 ASP 86 74 74 ASP ASP A . n A 1 87 HIS 87 75 75 HIS HIS A . n A 1 88 ILE 88 76 76 ILE ILE A . n A 1 89 ALA 89 77 77 ALA ALA A . n A 1 90 GLU 90 78 78 GLU GLU A . n A 1 91 GLY 91 79 79 GLY GLY A . n A 1 92 SER 92 80 80 SER SER A . n A 1 93 VAL 93 81 81 VAL VAL A . n A 1 94 ALA 94 82 82 ALA ALA A . n A 1 95 VAL 95 83 83 VAL VAL A . n A 1 96 ARG 96 84 84 ARG ARG A . n A 1 97 ILE 97 85 85 ILE ILE A . n A 1 98 GLN 98 86 86 GLN GLN A . n A 1 99 GLU 99 87 87 GLU GLU A . n A 1 100 VAL 100 88 88 VAL VAL A . n A 1 101 LYS 101 89 89 LYS LYS A . n A 1 102 ALA 102 90 90 ALA ALA A . n A 1 103 SER 103 91 91 SER SER A . n A 1 104 ASP 104 92 92 ASP ASP A . n A 1 105 ASP 105 93 93 ASP ASP A . n A 1 106 GLY 106 94 94 GLY GLY A . n A 1 107 GLU 107 95 95 GLU GLU A . n A 1 108 TYR 108 96 96 TYR TYR A . n A 1 109 ARG 109 97 97 ARG ARG A . n A 1 110 CYS 110 98 98 CYS CYS A . n A 1 111 PHE 111 99 99 PHE PHE A . n A 1 112 PHE 112 100 100 PHE PHE A . n A 1 113 ARG 113 101 101 ARG ARG A . n A 1 114 GLN 114 102 102 GLN GLN A . n A 1 115 ASP 115 103 103 ASP ASP A . n A 1 116 GLU 116 104 104 GLU GLU A . n A 1 117 ASN 117 105 105 ASN ASN A . n A 1 118 TYR 118 106 106 TYR TYR A . n A 1 119 GLU 119 107 107 GLU GLU A . n A 1 120 GLU 120 108 108 GLU GLU A . n A 1 121 ALA 121 109 109 ALA ALA A . n A 1 122 ILE 122 110 110 ILE ILE A . n A 1 123 VAL 123 111 111 VAL VAL A . n A 1 124 HIS 124 112 112 HIS HIS A . n A 1 125 LEU 125 113 113 LEU LEU A . n A 1 126 LYS 126 114 114 LYS LYS A . n A 1 127 VAL 127 115 115 VAL VAL A . n A 1 128 ALA 128 116 116 ALA ALA A . n A 1 129 ALA 129 117 117 ALA ALA A . n A 1 130 LEU 130 118 118 LEU LEU A . n A 1 131 GLY 131 119 119 GLY GLY A . n A 1 132 SER 132 120 120 SER SER A . n A 1 133 ASP 133 121 121 ASP ASP A . n A 1 134 PRO 134 122 122 PRO PRO A . n A 1 135 HIS 135 123 123 HIS HIS A . n A 1 136 ILE 136 124 124 ILE ILE A . n A 1 137 SER 137 125 125 SER SER A . n A 1 138 MSE 138 126 126 MSE MSE A . n A 1 139 LYS 139 127 127 LYS LYS A . n A 1 140 VAL 140 128 128 VAL VAL A . n A 1 141 GLN 141 129 129 GLN GLN A . n A 1 142 GLU 142 130 130 GLU GLU A . n A 1 143 SER 143 131 131 SER SER A . n A 1 144 GLY 144 132 132 GLY GLY A . n A 1 145 GLU 145 133 133 GLU GLU A . n A 1 146 ILE 146 134 134 ILE ILE A . n A 1 147 GLN 147 135 135 GLN GLN A . n A 1 148 LEU 148 136 136 LEU LEU A . n A 1 149 GLU 149 137 137 GLU GLU A . n A 1 150 CYS 150 138 138 CYS CYS A . n A 1 151 THR 151 139 139 THR THR A . n A 1 152 SER 152 140 140 SER SER A . n A 1 153 VAL 153 141 141 VAL VAL A . n A 1 154 GLY 154 142 142 GLY GLY A . n A 1 155 TRP 155 143 143 TRP TRP A . n A 1 156 TYR 156 144 144 TYR TYR A . n A 1 157 PRO 157 145 145 PRO PRO A . n A 1 158 GLU 158 146 146 GLU GLU A . n A 1 159 PRO 159 147 147 PRO PRO A . n A 1 160 GLN 160 148 148 GLN GLN A . n A 1 161 VAL 161 149 149 VAL VAL A . n A 1 162 GLN 162 150 150 GLN GLN A . n A 1 163 TRP 163 151 151 TRP TRP A . n A 1 164 GLN 164 152 152 GLN GLN A . n A 1 165 THR 165 153 153 THR THR A . n A 1 166 HIS 166 154 154 HIS HIS A . n A 1 167 ARG 167 155 155 ARG ARG A . n A 1 168 GLY 168 156 156 GLY GLY A . n A 1 169 GLU 169 157 157 GLU GLU A . n A 1 170 GLU 170 158 158 GLU GLU A . n A 1 171 PHE 171 159 159 PHE PHE A . n A 1 172 PRO 172 160 160 PRO PRO A . n A 1 173 SER 173 161 161 SER SER A . n A 1 174 MSE 174 162 162 MSE MSE A . n A 1 175 SER 175 163 163 SER SER A . n A 1 176 GLU 176 164 164 GLU GLU A . n A 1 177 SER 177 165 165 SER SER A . n A 1 178 ARG 178 166 166 ARG ARG A . n A 1 179 ASN 179 167 167 ASN ASN A . n A 1 180 PRO 180 168 168 PRO PRO A . n A 1 181 ASP 181 169 169 ASP ASP A . n A 1 182 GLU 182 170 170 GLU GLU A . n A 1 183 GLU 183 171 171 GLU GLU A . n A 1 184 GLY 184 172 172 GLY GLY A . n A 1 185 LEU 185 173 173 LEU LEU A . n A 1 186 PHE 186 174 174 PHE PHE A . n A 1 187 THR 187 175 175 THR THR A . n A 1 188 VAL 188 176 176 VAL VAL A . n A 1 189 ARG 189 177 177 ARG ARG A . n A 1 190 ALA 190 178 178 ALA ALA A . n A 1 191 SER 191 179 179 SER SER A . n A 1 192 VAL 192 180 180 VAL VAL A . n A 1 193 ILE 193 181 181 ILE ILE A . n A 1 194 ILE 194 182 182 ILE ILE A . n A 1 195 ARG 195 183 183 ARG ARG A . n A 1 196 ASP 196 184 184 ASP ASP A . n A 1 197 SER 197 185 185 SER SER A . n A 1 198 SER 198 186 186 SER SER A . n A 1 199 MSE 199 187 187 MSE MSE A . n A 1 200 LYS 200 188 188 LYS LYS A . n A 1 201 ASN 201 189 189 ASN ASN A . n A 1 202 VAL 202 190 190 VAL VAL A . n A 1 203 SER 203 191 191 SER SER A . n A 1 204 CYS 204 192 192 CYS CYS A . n A 1 205 ALA 205 193 193 ALA ALA A . n A 1 206 ILE 206 194 194 ILE ILE A . n A 1 207 ARG 207 195 195 ARG ARG A . n A 1 208 ASN 208 196 196 ASN ASN A . n A 1 209 LEU 209 197 197 LEU LEU A . n A 1 210 LEU 210 198 198 LEU LEU A . n A 1 211 LEU 211 199 199 LEU LEU A . n A 1 212 GLY 212 200 200 GLY GLY A . n A 1 213 GLN 213 201 201 GLN GLN A . n A 1 214 GLU 214 202 202 GLU GLU A . n A 1 215 LYS 215 203 203 LYS LYS A . n A 1 216 GLU 216 204 204 GLU GLU A . n A 1 217 VAL 217 205 205 VAL VAL A . n A 1 218 GLU 218 206 206 GLU GLU A . n A 1 219 VAL 219 207 207 VAL VAL A . n A 1 220 SER 220 208 208 SER SER A . n A 1 221 ILE 221 209 209 ILE ILE A . n A 1 222 PRO 222 210 210 PRO PRO A . n A 1 223 ALA 223 211 211 ALA ALA A . n A 1 224 SER 224 212 ? ? ? A . n # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 47 A MSE 35 ? MET SELENOMETHIONINE 2 A MSE 74 A MSE 62 ? MET SELENOMETHIONINE 3 A MSE 138 A MSE 126 ? MET SELENOMETHIONINE 4 A MSE 174 A MSE 162 ? MET SELENOMETHIONINE 5 A MSE 199 A MSE 187 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # _pdbx_audit_revision_history.ordinal 1 _pdbx_audit_revision_history.data_content_type 'Structure model' _pdbx_audit_revision_history.major_revision 1 _pdbx_audit_revision_history.minor_revision 0 _pdbx_audit_revision_history.revision_date 2013-11-13 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _diffrn_reflns.diffrn_id 1 _diffrn_reflns.pdbx_d_res_high 2.800 _diffrn_reflns.pdbx_d_res_low 59.188 _diffrn_reflns.pdbx_number_obs 8446 _diffrn_reflns.pdbx_Rmerge_I_obs ? _diffrn_reflns.pdbx_Rsym_value 0.033 _diffrn_reflns.pdbx_chi_squared ? _diffrn_reflns.av_sigmaI_over_netI 14.10 _diffrn_reflns.pdbx_redundancy 3.90 _diffrn_reflns.pdbx_percent_possible_obs 99.40 _diffrn_reflns.number 32994 _diffrn_reflns.pdbx_observed_criterion ? _diffrn_reflns.limit_h_max ? _diffrn_reflns.limit_h_min ? _diffrn_reflns.limit_k_max ? _diffrn_reflns.limit_k_min ? _diffrn_reflns.limit_l_max ? _diffrn_reflns.limit_l_min ? # loop_ _pdbx_diffrn_reflns_shell.diffrn_id _pdbx_diffrn_reflns_shell.d_res_high _pdbx_diffrn_reflns_shell.d_res_low _pdbx_diffrn_reflns_shell.number_obs _pdbx_diffrn_reflns_shell.rejects _pdbx_diffrn_reflns_shell.Rmerge_I_obs _pdbx_diffrn_reflns_shell.Rsym_value _pdbx_diffrn_reflns_shell.chi_squared _pdbx_diffrn_reflns_shell.redundancy _pdbx_diffrn_reflns_shell.percent_possible_obs 1 8.85 59.19 ? ? 0.012 0.012 ? 3.40 96.50 1 6.26 8.85 ? ? 0.025 0.025 ? 3.70 99.50 1 5.11 6.26 ? ? 0.046 0.046 ? 3.80 99.70 1 4.43 5.11 ? ? 0.027 0.027 ? 3.90 99.60 1 3.96 4.43 ? ? 0.025 0.025 ? 3.90 99.50 1 3.61 3.96 ? ? 0.034 0.034 ? 4.00 99.60 1 3.35 3.61 ? ? 0.041 0.041 ? 4.00 99.50 1 3.13 3.35 ? ? 0.048 0.048 ? 4.00 99.60 1 2.95 3.13 ? ? 0.060 0.060 ? 4.00 99.30 1 2.80 2.95 ? ? 0.083 0.083 ? 3.90 99.10 # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 SCALA 3.3.9 2008/10/21 other 'Phil R. Evans' pre@mrc-lmb.cam.ac.uk 'data scaling' http://www.ccp4.ac.uk/dist/html/scala.html Fortran_77 ? 3 REFMAC . ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 4 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 5 MAR345dtb . ? ? ? ? 'data collection' ? ? ? 6 Auto-Rickshaw . ? ? ? ? phasing ? ? ? # _pdbx_entry_details.entry_id 4HH8 _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ;THE DIFFERENCES BETWEEN THE SEQUENCE OF THE SOLVED STRUCTURE AND THE DATABASE ENTRY P18892 ARISE FROM A SPECIES-SPECIFIC VARIATION IN THE CDNA OF A THE SPECIFIC BOVINE STRAIN CLONED ; _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 NE A ARG 68 ? ? CZ A ARG 68 ? ? NH2 A ARG 68 ? ? 117.29 120.30 -3.01 0.50 N 2 1 CB A LEU 118 ? ? CG A LEU 118 ? ? CD2 A LEU 118 ? ? 93.07 111.00 -17.93 1.70 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ARG A 41 ? ? -108.27 -91.79 2 1 GLU A 73 ? ? -143.35 21.08 3 1 ASP A 103 ? ? 44.59 -103.20 4 1 GLN A 129 ? ? -120.14 -143.61 5 1 GLU A 130 ? ? -28.42 78.09 6 1 SER A 131 ? ? 58.41 79.92 7 1 PRO A 145 ? ? -76.64 -153.21 8 1 ASP A 169 ? ? -75.48 -169.88 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A ALA -11 ? A ALA 1 2 1 Y 1 A SER -10 ? A SER 2 3 1 Y 1 A TRP -9 ? A TRP 3 4 1 Y 1 A SER -8 ? A SER 4 5 1 Y 1 A HIS -7 ? A HIS 5 6 1 Y 1 A PRO -6 ? A PRO 6 7 1 Y 1 A GLN -5 ? A GLN 7 8 1 Y 1 A PHE -4 ? A PHE 8 9 1 Y 1 A GLU -3 ? A GLU 9 10 1 Y 1 A LYS -2 ? A LYS 10 11 1 Y 1 A GLY -1 ? A GLY 11 12 1 Y 1 A ALA 0 ? A ALA 12 13 1 Y 1 A SER 212 ? A SER 224 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 301 1 HOH HOH A . B 2 HOH 2 302 2 HOH HOH A . B 2 HOH 3 303 3 HOH HOH A . B 2 HOH 4 304 4 HOH HOH A . B 2 HOH 5 305 5 HOH HOH A . B 2 HOH 6 306 6 HOH HOH A . B 2 HOH 7 307 7 HOH HOH A . B 2 HOH 8 308 8 HOH HOH A . B 2 HOH 9 309 9 HOH HOH A . B 2 HOH 10 310 10 HOH HOH A . B 2 HOH 11 311 11 HOH HOH A . B 2 HOH 12 312 12 HOH HOH A . B 2 HOH 13 313 13 HOH HOH A . B 2 HOH 14 314 14 HOH HOH A . B 2 HOH 15 315 15 HOH HOH A . B 2 HOH 16 316 16 HOH HOH A . B 2 HOH 17 317 17 HOH HOH A . B 2 HOH 18 318 18 HOH HOH A . B 2 HOH 19 319 19 HOH HOH A . B 2 HOH 20 320 20 HOH HOH A . B 2 HOH 21 321 21 HOH HOH A . B 2 HOH 22 322 22 HOH HOH A . B 2 HOH 23 323 23 HOH HOH A . B 2 HOH 24 324 24 HOH HOH A . B 2 HOH 25 325 25 HOH HOH A . B 2 HOH 26 326 26 HOH HOH A . B 2 HOH 27 327 27 HOH HOH A . B 2 HOH 28 328 28 HOH HOH A . B 2 HOH 29 329 29 HOH HOH A . B 2 HOH 30 330 30 HOH HOH A . B 2 HOH 31 331 31 HOH HOH A . B 2 HOH 32 332 32 HOH HOH A . B 2 HOH 33 333 33 HOH HOH A . B 2 HOH 34 334 34 HOH HOH A . B 2 HOH 35 335 35 HOH HOH A . B 2 HOH 36 336 36 HOH HOH A . B 2 HOH 37 337 37 HOH HOH A . B 2 HOH 38 338 38 HOH HOH A . B 2 HOH 39 339 39 HOH HOH A . B 2 HOH 40 340 40 HOH HOH A . B 2 HOH 41 341 41 HOH HOH A . B 2 HOH 42 342 42 HOH HOH A . B 2 HOH 43 343 43 HOH HOH A . B 2 HOH 44 344 44 HOH HOH A . B 2 HOH 45 345 45 HOH HOH A . B 2 HOH 46 346 46 HOH HOH A . B 2 HOH 47 347 47 HOH HOH A . B 2 HOH 48 348 48 HOH HOH A . B 2 HOH 49 349 49 HOH HOH A . B 2 HOH 50 350 50 HOH HOH A . B 2 HOH 51 351 51 HOH HOH A . B 2 HOH 52 352 52 HOH HOH A . B 2 HOH 53 353 53 HOH HOH A . B 2 HOH 54 354 54 HOH HOH A . B 2 HOH 55 355 55 HOH HOH A . #