data_4HIF
# 
_entry.id   4HIF 
# 
_audit_conform.dict_name       mmcif_pdbx.dic 
_audit_conform.dict_version    5.379 
_audit_conform.dict_location   http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic 
# 
loop_
_database_2.database_id 
_database_2.database_code 
_database_2.pdbx_database_accession 
_database_2.pdbx_DOI 
PDB   4HIF         pdb_00004hif 10.2210/pdb4hif/pdb 
NDB   NA2073       ?            ?                   
RCSB  RCSB075505   ?            ?                   
WWPDB D_1000075505 ?            ?                   
# 
loop_
_pdbx_database_related.db_name 
_pdbx_database_related.db_id 
_pdbx_database_related.details 
_pdbx_database_related.content_type 
PDB 1ICK . unspecified 
PDB 211D . unspecified 
PDB 3P4J . unspecified 
PDB 1D39 . unspecified 
PDB 4HID . unspecified 
# 
_pdbx_database_status.status_code                     REL 
_pdbx_database_status.entry_id                        4HIF 
_pdbx_database_status.recvd_initial_deposition_date   2012-10-11 
_pdbx_database_status.deposit_site                    RCSB 
_pdbx_database_status.process_site                    RCSB 
_pdbx_database_status.status_code_sf                  REL 
_pdbx_database_status.status_code_mr                  ? 
_pdbx_database_status.SG_entry                        ? 
_pdbx_database_status.status_code_cs                  ? 
_pdbx_database_status.methods_development_category    ? 
_pdbx_database_status.pdb_format_compatible           Y 
_pdbx_database_status.status_code_nmr_data            ? 
# 
loop_
_audit_author.name 
_audit_author.pdbx_ordinal 
'Drozdzal, P.'  1 
'Gilski, M.'    2 
'Kierzek, R.'   3 
'Lomozik, L.'   4 
'Jaskolski, M.' 5 
# 
loop_
_citation.id 
_citation.title 
_citation.journal_abbrev 
_citation.journal_volume 
_citation.page_first 
_citation.page_last 
_citation.year 
_citation.journal_id_ASTM 
_citation.country 
_citation.journal_id_ISSN 
_citation.journal_id_CSD 
_citation.book_publisher 
_citation.pdbx_database_id_PubMed 
_citation.pdbx_database_id_DOI 
primary 'Ultrahigh-resolution crystal structures of Z-DNA in complex with Mn(2+) and Zn(2+) ions.'    'Acta Crystallogr.,Sect.D' 
69 1180 1190 2013 ABCRE6 DK 0907-4449 0766 ? 23695262 10.1107/S0907444913007798 
1       'High regularity of Z-DNA revealed by ultra high-resolution crystal structure at 0.55 A'      'Nucleic Acids Res.'       
39 6238 6248 2011 NARHAD UK 0305-1048 0389 ? ?        ?                         
2       'Anomalous signal of phosphorus used for phasing DNA oligomer: importance of data redundancy' 'Acta Crystallogr.,Sect.D' 
57 990  995  2001 ABCRE6 DK 0907-4449 0766 ? ?        ?                         
# 
loop_
_citation_author.citation_id 
_citation_author.name 
_citation_author.ordinal 
_citation_author.identifier_ORCID 
primary 'Drozdzal, P.'      1  ? 
primary 'Gilski, M.'        2  ? 
primary 'Kierzek, R.'       3  ? 
primary 'Lomozik, L.'       4  ? 
primary 'Jaskolski, M.'     5  ? 
1       'Brzezinski, K.'    6  ? 
1       'Brzuszkiewicz, A.' 7  ? 
1       'Dauter, M.'        8  ? 
1       'Kubicki, M.'       9  ? 
1       'Jaskolski, M.'     10 ? 
1       'Dauter, Z.'        11 ? 
2       'Dauter, Z.'        12 ? 
2       'Adamiak, D.A.'     13 ? 
# 
_cell.entry_id           4HIF 
_cell.length_a           17.791 
_cell.length_b           30.907 
_cell.length_c           44.196 
_cell.angle_alpha        90.00 
_cell.angle_beta         90.00 
_cell.angle_gamma        90.00 
_cell.Z_PDB              8 
_cell.pdbx_unique_axis   ? 
_cell.length_a_esd       ? 
_cell.length_b_esd       ? 
_cell.length_c_esd       ? 
_cell.angle_alpha_esd    ? 
_cell.angle_beta_esd     ? 
_cell.angle_gamma_esd    ? 
# 
_symmetry.entry_id                         4HIF 
_symmetry.space_group_name_H-M             'P 21 21 21' 
_symmetry.pdbx_full_space_group_name_H-M   ? 
_symmetry.cell_setting                     ? 
_symmetry.Int_Tables_number                19 
_symmetry.space_group_name_Hall            ? 
# 
loop_
_entity.id 
_entity.type 
_entity.src_method 
_entity.pdbx_description 
_entity.formula_weight 
_entity.pdbx_number_of_molecules 
_entity.pdbx_ec 
_entity.pdbx_mutation 
_entity.pdbx_fragment 
_entity.details 
1 polymer     syn 
;DNA (5'-D(*CP*GP*CP*GP*CP*G)-3')
;
1810.205 2  ? ? ? ? 
2 non-polymer syn 'ZINC ION'                         65.409   2  ? ? ? ? 
3 non-polymer syn 'CHLORIDE ION'                     35.453   1  ? ? ? ? 
4 non-polymer syn 'SPERMINE (FULLY PROTONATED FORM)' 206.372  1  ? ? ? ? 
5 water       nat water                              18.015   75 ? ? ? ? 
# 
_entity_poly.entity_id                      1 
_entity_poly.type                           polydeoxyribonucleotide 
_entity_poly.nstd_linkage                   no 
_entity_poly.nstd_monomer                   no 
_entity_poly.pdbx_seq_one_letter_code       '(DC)(DG)(DC)(DG)(DC)(DG)' 
_entity_poly.pdbx_seq_one_letter_code_can   CGCGCG 
_entity_poly.pdbx_strand_id                 A,B 
_entity_poly.pdbx_target_identifier         ? 
# 
loop_
_entity_poly_seq.entity_id 
_entity_poly_seq.num 
_entity_poly_seq.mon_id 
_entity_poly_seq.hetero 
1 1 DC n 
1 2 DG n 
1 3 DC n 
1 4 DG n 
1 5 DC n 
1 6 DG n 
# 
_pdbx_entity_src_syn.entity_id              1 
_pdbx_entity_src_syn.pdbx_src_id            1 
_pdbx_entity_src_syn.pdbx_alt_source_flag   sample 
_pdbx_entity_src_syn.pdbx_beg_seq_num       ? 
_pdbx_entity_src_syn.pdbx_end_seq_num       ? 
_pdbx_entity_src_syn.organism_scientific    'synthetic construct' 
_pdbx_entity_src_syn.organism_common_name   ? 
_pdbx_entity_src_syn.ncbi_taxonomy_id       32630 
_pdbx_entity_src_syn.details                'Synthetic construct' 
# 
_struct_ref.id                         1 
_struct_ref.db_name                    PDB 
_struct_ref.db_code                    4HIF 
_struct_ref.pdbx_db_accession          4HIF 
_struct_ref.entity_id                  1 
_struct_ref.pdbx_align_begin           ? 
_struct_ref.pdbx_seq_one_letter_code   ? 
_struct_ref.pdbx_db_isoform            ? 
# 
loop_
_struct_ref_seq.align_id 
_struct_ref_seq.ref_id 
_struct_ref_seq.pdbx_PDB_id_code 
_struct_ref_seq.pdbx_strand_id 
_struct_ref_seq.seq_align_beg 
_struct_ref_seq.pdbx_seq_align_beg_ins_code 
_struct_ref_seq.seq_align_end 
_struct_ref_seq.pdbx_seq_align_end_ins_code 
_struct_ref_seq.pdbx_db_accession 
_struct_ref_seq.db_align_beg 
_struct_ref_seq.pdbx_db_align_beg_ins_code 
_struct_ref_seq.db_align_end 
_struct_ref_seq.pdbx_db_align_end_ins_code 
_struct_ref_seq.pdbx_auth_seq_align_beg 
_struct_ref_seq.pdbx_auth_seq_align_end 
1 1 4HIF A 1 ? 6 ? 4HIF 1 ? 6  ? 1 6  
2 1 4HIF B 1 ? 6 ? 4HIF 7 ? 12 ? 7 12 
# 
loop_
_chem_comp.id 
_chem_comp.type 
_chem_comp.mon_nstd_flag 
_chem_comp.name 
_chem_comp.pdbx_synonyms 
_chem_comp.formula 
_chem_comp.formula_weight 
CL  non-polymer   . 'CHLORIDE ION'                       ? 'Cl -1'           35.453  
DC  'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE"  ? 'C9 H14 N3 O7 P'  307.197 
DG  'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 
HOH non-polymer   . WATER                                ? 'H2 O'            18.015  
SPK non-polymer   . 'SPERMINE (FULLY PROTONATED FORM)'   ? 'C10 H30 N4 4'    206.372 
ZN  non-polymer   . 'ZINC ION'                           ? 'Zn 2'            65.409  
# 
_exptl.entry_id          4HIF 
_exptl.method            'X-RAY DIFFRACTION' 
_exptl.crystals_number   1 
# 
_exptl_crystal.id                    1 
_exptl_crystal.density_meas          ? 
_exptl_crystal.density_Matthews      1.53 
_exptl_crystal.density_percent_sol   19.80 
_exptl_crystal.description           ? 
_exptl_crystal.F_000                 ? 
_exptl_crystal.preparation           ? 
# 
_exptl_crystal_grow.crystal_id      1 
_exptl_crystal_grow.method          ? 
_exptl_crystal_grow.temp            292 
_exptl_crystal_grow.temp_details    ? 
_exptl_crystal_grow.pH              6 
_exptl_crystal_grow.pdbx_pH_range   ? 
_exptl_crystal_grow.pdbx_details    
;A 1.5 MM DNA WATER SOLUTION MIXED 1:1 V/V WITH 10% MPD, 12 MM SPERMINE TETRA-HCL,12 MM NACL, 80 MM KCL AND EQUILIBRATED AGAINST 35% MPD, PH 6. VAPOR DIFFUSION, HANGING DROP METHOD, TEMPERATURE 292K. FOR ZN2+ SOAKING A CRYSTAL WAS PLACED IN 0.002 ML OF THE RESERVOIR SOLUTION MIXED WITH 0.002 ML OF 5 MM ZNCL2 FOR ONE WEEK.
;
# 
_diffrn.id                     1 
_diffrn.ambient_temp           100 
_diffrn.ambient_temp_details   ? 
_diffrn.crystal_id             1 
# 
_diffrn_detector.diffrn_id              1 
_diffrn_detector.detector               'IMAGE PLATE' 
_diffrn_detector.type                   'MAR555 FLAT PANEL' 
_diffrn_detector.pdbx_collection_date   2010-12-02 
_diffrn_detector.details                ? 
# 
_diffrn_radiation.diffrn_id                        1 
_diffrn_radiation.wavelength_id                    1 
_diffrn_radiation.pdbx_monochromatic_or_laue_m_l   M 
_diffrn_radiation.monochromator                    'SI 111 CHANNEL' 
_diffrn_radiation.pdbx_diffrn_protocol             'SINGLE WAVELENGTH' 
_diffrn_radiation.pdbx_scattering_type             x-ray 
# 
_diffrn_radiation_wavelength.id           1 
_diffrn_radiation_wavelength.wavelength   0.8174 
_diffrn_radiation_wavelength.wt           1.0 
# 
_diffrn_source.diffrn_id                   1 
_diffrn_source.source                      SYNCHROTRON 
_diffrn_source.type                        'EMBL/DESY, HAMBURG BEAMLINE X11' 
_diffrn_source.pdbx_synchrotron_site       'EMBL/DESY, HAMBURG' 
_diffrn_source.pdbx_synchrotron_beamline   X11 
_diffrn_source.pdbx_wavelength             0.8174 
_diffrn_source.pdbx_wavelength_list        ? 
# 
_reflns.pdbx_diffrn_id               1 
_reflns.pdbx_ordinal                 1 
_reflns.entry_id                     4HIF 
_reflns.observed_criterion_sigma_I   -3.000 
_reflns.observed_criterion_sigma_F   ? 
_reflns.d_resolution_low             17.976 
_reflns.d_resolution_high            0.849 
_reflns.number_obs                   36512 
_reflns.number_all                   ? 
_reflns.percent_possible_obs         87.9 
_reflns.pdbx_Rmerge_I_obs            0.03600 
_reflns.pdbx_Rsym_value              ? 
_reflns.pdbx_netI_over_sigmaI        20.0200 
_reflns.B_iso_Wilson_estimate        8.109 
_reflns.pdbx_redundancy              3.020 
_reflns.R_free_details               ? 
_reflns.pdbx_chi_squared             ? 
_reflns.pdbx_scaling_rejects         ? 
# 
_reflns_shell.pdbx_diffrn_id         1 
_reflns_shell.pdbx_ordinal           1 
_reflns_shell.d_res_high             0.85 
_reflns_shell.d_res_low              0.90 
_reflns_shell.percent_possible_all   63.8 
_reflns_shell.Rmerge_I_obs           0.22200 
_reflns_shell.pdbx_Rsym_value        ? 
_reflns_shell.meanI_over_sigI_obs    3.110 
_reflns_shell.pdbx_redundancy        1.77 
_reflns_shell.percent_possible_obs   ? 
_reflns_shell.number_unique_all      ? 
_reflns_shell.number_measured_all    ? 
_reflns_shell.number_measured_obs    ? 
_reflns_shell.number_unique_obs      ? 
_reflns_shell.pdbx_chi_squared       ? 
# 
_refine.pdbx_refine_id                           'X-RAY DIFFRACTION' 
_refine.entry_id                                 4HIF 
_refine.pdbx_diffrn_id                           1 
_refine.pdbx_TLS_residual_ADP_flag               ? 
_refine.ls_number_reflns_obs                     ? 
_refine.ls_number_reflns_all                     36512 
_refine.pdbx_ls_sigma_I                          ? 
_refine.pdbx_ls_sigma_F                          ? 
_refine.pdbx_data_cutoff_high_absF               ? 
_refine.pdbx_data_cutoff_low_absF                ? 
_refine.pdbx_data_cutoff_high_rms_absF           ? 
_refine.ls_d_res_low                             17.976 
_refine.ls_d_res_high                            0.85 
_refine.ls_percent_reflns_obs                    87.9 
_refine.ls_R_factor_obs                          0.092 
_refine.ls_R_factor_all                          0.092 
_refine.ls_R_factor_R_work                       ? 
_refine.ls_R_factor_R_free                       0.113 
_refine.ls_R_factor_R_free_error                 ? 
_refine.ls_R_factor_R_free_error_details         ? 
_refine.ls_percent_reflns_R_free                 2.75 
_refine.ls_number_reflns_R_free                  1004 
_refine.ls_number_parameters                     3228 
_refine.ls_number_restraints                     709 
_refine.occupancy_min                            ? 
_refine.occupancy_max                            ? 
_refine.correlation_coeff_Fo_to_Fc               ? 
_refine.correlation_coeff_Fo_to_Fc_free          ? 
_refine.B_iso_mean                               ? 
_refine.aniso_B[1][1]                            ? 
_refine.aniso_B[2][2]                            ? 
_refine.aniso_B[3][3]                            ? 
_refine.aniso_B[1][2]                            ? 
_refine.aniso_B[1][3]                            ? 
_refine.aniso_B[2][3]                            ? 
_refine.solvent_model_details                    'MOEWS & KRETSINGER, J.MOL.BIOL.(1975) 91, 201' 
_refine.solvent_model_param_ksol                 ? 
_refine.solvent_model_param_bsol                 ? 
_refine.pdbx_solvent_vdw_probe_radii             ? 
_refine.pdbx_solvent_ion_probe_radii             ? 
_refine.pdbx_solvent_shrinkage_radii             ? 
_refine.pdbx_ls_cross_valid_method               'FREE R' 
_refine.details                                  
;THE REFINEMENT WAS CARRIED OUT AGAINST SEPARATE BIJVOET PAIRS. ANISOTROPIC ADPS. ANISOTROPIC REFINEMENT REDUCED FREE R-FACTOR FROM 0.1562 TO 0.1235. HYDROGEN ATOMS WERE ADDED AT RIDING POSITIONS. THE FINAL REFINEMENT WAS CALCULATED USING WEIGHTED FULL MATRIX LEAST-SQUARES PROCEDURE.
;
_refine.pdbx_starting_model                      1I0T 
_refine.pdbx_method_to_determine_struct          'MOLECULAR REPLACEMENT' 
_refine.pdbx_isotropic_thermal_model             ? 
_refine.pdbx_stereochemistry_target_values       'CLOWNEY, GELBIN & PARKINSON' 
_refine.pdbx_stereochem_target_val_spec_case     ? 
_refine.pdbx_R_Free_selection_details            RANDOM 
_refine.pdbx_overall_ESU_R                       ? 
_refine.pdbx_overall_ESU_R_Free                  ? 
_refine.overall_SU_ML                            ? 
_refine.pdbx_overall_phase_error                 ? 
_refine.overall_SU_B                             ? 
_refine.overall_SU_R_Cruickshank_DPI             ? 
_refine.pdbx_overall_SU_R_free_Cruickshank_DPI   ? 
_refine.pdbx_overall_SU_R_Blow_DPI               ? 
_refine.pdbx_overall_SU_R_free_Blow_DPI          ? 
_refine.ls_redundancy_reflns_obs                 ? 
_refine.overall_SU_R_free                        ? 
_refine.ls_wR_factor_R_free                      ? 
_refine.ls_wR_factor_R_work                      ? 
_refine.overall_FOM_free_R_set                   ? 
_refine.overall_FOM_work_R_set                   ? 
# 
_refine_analyze.pdbx_refine_id                  'X-RAY DIFFRACTION' 
_refine_analyze.entry_id                        4HIF 
_refine_analyze.Luzzati_coordinate_error_obs    ? 
_refine_analyze.Luzzati_sigma_a_obs             ? 
_refine_analyze.Luzzati_d_res_low_obs           ? 
_refine_analyze.Luzzati_coordinate_error_free   ? 
_refine_analyze.Luzzati_sigma_a_free            ? 
_refine_analyze.Luzzati_d_res_low_free          ? 
_refine_analyze.number_disordered_residues      6 
_refine_analyze.occupancy_sum_hydrogen          144.60 
_refine_analyze.occupancy_sum_non_hydrogen      313.39 
# 
_refine_hist.pdbx_refine_id                   'X-RAY DIFFRACTION' 
_refine_hist.cycle_id                         LAST 
_refine_hist.pdbx_number_atoms_protein        0 
_refine_hist.pdbx_number_atoms_nucleic_acid   240 
_refine_hist.pdbx_number_atoms_ligand         17 
_refine_hist.number_atoms_solvent             75 
_refine_hist.number_atoms_total               332 
_refine_hist.d_res_high                       0.85 
_refine_hist.d_res_low                        17.976 
# 
loop_
_refine_ls_restr.type 
_refine_ls_restr.dev_ideal 
_refine_ls_restr.dev_ideal_target 
_refine_ls_restr.weight 
_refine_ls_restr.number 
_refine_ls_restr.pdbx_refine_id 
_refine_ls_restr.pdbx_restraint_function 
s_bond_d               0.027 ? ? ? 'X-RAY DIFFRACTION' ? 
s_angle_d              0.059 ? ? ? 'X-RAY DIFFRACTION' ? 
s_similar_dist         0.000 ? ? ? 'X-RAY DIFFRACTION' ? 
s_from_restr_planes    0.000 ? ? ? 'X-RAY DIFFRACTION' ? 
s_zero_chiral_vol      0.000 ? ? ? 'X-RAY DIFFRACTION' ? 
s_non_zero_chiral_vol  0.000 ? ? ? 'X-RAY DIFFRACTION' ? 
s_anti_bump_dis_restr  0.123 ? ? ? 'X-RAY DIFFRACTION' ? 
s_rigid_bond_adp_cmpnt 0.025 ? ? ? 'X-RAY DIFFRACTION' ? 
s_similar_adp_cmpnt    0.033 ? ? ? 'X-RAY DIFFRACTION' ? 
s_approx_iso_adps      0.076 ? ? ? 'X-RAY DIFFRACTION' ? 
# 
_pdbx_refine.pdbx_refine_id                              'X-RAY DIFFRACTION' 
_pdbx_refine.entry_id                                    4HIF 
_pdbx_refine.R_factor_all_no_cutoff                      0.092 
_pdbx_refine.R_factor_obs_no_cutoff                      0.092 
_pdbx_refine.free_R_factor_no_cutoff                     0.113 
_pdbx_refine.free_R_error_no_cutoff                      ? 
_pdbx_refine.free_R_val_test_set_size_perc_no_cutoff     2.75 
_pdbx_refine.free_R_val_test_set_ct_no_cutoff            1004 
_pdbx_refine.R_factor_all_4sig_cutoff                    0.083 
_pdbx_refine.R_factor_obs_4sig_cutoff                    0.083 
_pdbx_refine.free_R_factor_4sig_cutoff                   0.104 
_pdbx_refine.free_R_val_test_set_size_perc_4sig_cutoff   2.73 
_pdbx_refine.free_R_val_test_set_ct_4sig_cutoff          850 
_pdbx_refine.number_reflns_obs_4sig_cutoff               31130 
# 
_struct.entry_id                  4HIF 
_struct.title                     'Ultrahigh-resolution crystal structure of Z-DNA in complex with Zn2+ ions' 
_struct.pdbx_model_details        ? 
_struct.pdbx_CASP_flag            ? 
_struct.pdbx_model_type_details   ? 
# 
_struct_keywords.entry_id        4HIF 
_struct_keywords.pdbx_keywords   DNA 
_struct_keywords.text            'self-complementary DNA, DNA, Z-DNA' 
# 
loop_
_struct_asym.id 
_struct_asym.pdbx_blank_PDB_chainid_flag 
_struct_asym.pdbx_modified 
_struct_asym.entity_id 
_struct_asym.details 
A N N 1 ? 
B N N 1 ? 
C N N 2 ? 
D N N 2 ? 
E N N 3 ? 
F N N 4 ? 
G N N 5 ? 
H N N 5 ? 
# 
_struct_biol.id        1 
_struct_biol.details   ? 
# 
loop_
_struct_conn.id 
_struct_conn.conn_type_id 
_struct_conn.pdbx_leaving_atom_flag 
_struct_conn.pdbx_PDB_id 
_struct_conn.ptnr1_label_asym_id 
_struct_conn.ptnr1_label_comp_id 
_struct_conn.ptnr1_label_seq_id 
_struct_conn.ptnr1_label_atom_id 
_struct_conn.pdbx_ptnr1_label_alt_id 
_struct_conn.pdbx_ptnr1_PDB_ins_code 
_struct_conn.pdbx_ptnr1_standard_comp_id 
_struct_conn.ptnr1_symmetry 
_struct_conn.ptnr2_label_asym_id 
_struct_conn.ptnr2_label_comp_id 
_struct_conn.ptnr2_label_seq_id 
_struct_conn.ptnr2_label_atom_id 
_struct_conn.pdbx_ptnr2_label_alt_id 
_struct_conn.pdbx_ptnr2_PDB_ins_code 
_struct_conn.ptnr1_auth_asym_id 
_struct_conn.ptnr1_auth_comp_id 
_struct_conn.ptnr1_auth_seq_id 
_struct_conn.ptnr2_auth_asym_id 
_struct_conn.ptnr2_auth_comp_id 
_struct_conn.ptnr2_auth_seq_id 
_struct_conn.ptnr2_symmetry 
_struct_conn.pdbx_ptnr3_label_atom_id 
_struct_conn.pdbx_ptnr3_label_seq_id 
_struct_conn.pdbx_ptnr3_label_comp_id 
_struct_conn.pdbx_ptnr3_label_asym_id 
_struct_conn.pdbx_ptnr3_label_alt_id 
_struct_conn.pdbx_ptnr3_PDB_ins_code 
_struct_conn.details 
_struct_conn.pdbx_dist_value 
_struct_conn.pdbx_value_order 
_struct_conn.pdbx_role 
metalc1  metalc ? ? A DG 6 N7 ? ? ? 1_555 C ZN  . ZN ? ? A DG 6   A ZN  101 1_555 ? ? ? ? ? ? ?            2.112 ? ? 
metalc2  metalc ? ? C ZN . ZN ? ? ? 1_555 G HOH . O  ? ? A ZN 101 A HOH 201 1_555 ? ? ? ? ? ? ?            2.117 ? ? 
metalc3  metalc ? ? C ZN . ZN ? ? ? 1_555 G HOH . O  ? ? A ZN 101 A HOH 205 1_555 ? ? ? ? ? ? ?            2.097 ? ? 
metalc4  metalc ? ? C ZN . ZN ? ? ? 1_555 G HOH . O  ? ? A ZN 101 A HOH 210 1_555 ? ? ? ? ? ? ?            2.140 ? ? 
metalc5  metalc ? ? C ZN . ZN ? ? ? 1_555 G HOH . O  ? ? A ZN 101 A HOH 234 1_555 ? ? ? ? ? ? ?            2.110 ? ? 
metalc6  metalc ? ? C ZN . ZN ? ? ? 1_555 G HOH . O  ? ? A ZN 101 A HOH 235 1_555 ? ? ? ? ? ? ?            2.114 ? ? 
metalc7  metalc ? ? B DG 4 N7 ? ? ? 1_555 D ZN  . ZN ? ? B DG 10  B ZN  101 1_555 ? ? ? ? ? ? ?            1.991 ? ? 
metalc8  metalc ? ? D ZN . ZN ? ? ? 1_555 H HOH . O  ? ? B ZN 101 B HOH 233 1_555 ? ? ? ? ? ? ?            1.944 ? ? 
hydrog1  hydrog ? ? A DC 1 N3 ? ? ? 1_555 B DG  6 N1 ? ? A DC 1   B DG  12  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog2  hydrog ? ? A DC 1 N4 ? ? ? 1_555 B DG  6 O6 ? ? A DC 1   B DG  12  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog3  hydrog ? ? A DC 1 O2 ? ? ? 1_555 B DG  6 N2 ? ? A DC 1   B DG  12  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog4  hydrog ? ? A DG 2 N1 ? ? ? 1_555 B DC  5 N3 ? ? A DG 2   B DC  11  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog5  hydrog ? ? A DG 2 N2 ? ? ? 1_555 B DC  5 O2 ? ? A DG 2   B DC  11  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog6  hydrog ? ? A DG 2 O6 ? ? ? 1_555 B DC  5 N4 ? ? A DG 2   B DC  11  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog7  hydrog ? ? A DC 3 N3 ? ? ? 1_555 B DG  4 N1 ? ? A DC 3   B DG  10  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog8  hydrog ? ? A DC 3 N4 ? ? ? 1_555 B DG  4 O6 ? ? A DC 3   B DG  10  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog9  hydrog ? ? A DC 3 O2 ? ? ? 1_555 B DG  4 N2 ? ? A DC 3   B DG  10  1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog10 hydrog ? ? A DG 4 N1 ? ? ? 1_555 B DC  3 N3 ? ? A DG 4   B DC  9   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog11 hydrog ? ? A DG 4 N2 ? ? ? 1_555 B DC  3 O2 ? ? A DG 4   B DC  9   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog12 hydrog ? ? A DG 4 O6 ? ? ? 1_555 B DC  3 N4 ? ? A DG 4   B DC  9   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog13 hydrog ? ? A DC 5 N3 ? ? ? 1_555 B DG  2 N1 ? ? A DC 5   B DG  8   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog14 hydrog ? ? A DC 5 N4 ? ? ? 1_555 B DG  2 O6 ? ? A DC 5   B DG  8   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog15 hydrog ? ? A DC 5 O2 ? ? ? 1_555 B DG  2 N2 ? ? A DC 5   B DG  8   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog16 hydrog ? ? A DG 6 N1 ? ? ? 1_555 B DC  1 N3 ? ? A DG 6   B DC  7   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog17 hydrog ? ? A DG 6 N2 ? ? ? 1_555 B DC  1 O2 ? ? A DG 6   B DC  7   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
hydrog18 hydrog ? ? A DG 6 O6 ? ? ? 1_555 B DC  1 N4 ? ? A DG 6   B DC  7   1_555 ? ? ? ? ? ? WATSON-CRICK ?     ? ? 
# 
loop_
_struct_conn_type.id 
_struct_conn_type.criteria 
_struct_conn_type.reference 
metalc ? ? 
hydrog ? ? 
# 
loop_
_struct_site.id 
_struct_site.pdbx_evidence_code 
_struct_site.pdbx_auth_asym_id 
_struct_site.pdbx_auth_comp_id 
_struct_site.pdbx_auth_seq_id 
_struct_site.pdbx_auth_ins_code 
_struct_site.pdbx_num_residues 
_struct_site.details 
AC1 Software A ZN  101 ? 6  'BINDING SITE FOR RESIDUE ZN A 101'  
AC2 Software B ZN  101 ? 4  'BINDING SITE FOR RESIDUE ZN B 101'  
AC3 Software B CL  102 ? 4  'BINDING SITE FOR RESIDUE CL B 102'  
AC4 Software B SPK 103 ? 12 'BINDING SITE FOR RESIDUE SPK B 103' 
# 
loop_
_struct_site_gen.id 
_struct_site_gen.site_id 
_struct_site_gen.pdbx_num_res 
_struct_site_gen.label_comp_id 
_struct_site_gen.label_asym_id 
_struct_site_gen.label_seq_id 
_struct_site_gen.pdbx_auth_ins_code 
_struct_site_gen.auth_comp_id 
_struct_site_gen.auth_asym_id 
_struct_site_gen.auth_seq_id 
_struct_site_gen.label_atom_id 
_struct_site_gen.label_alt_id 
_struct_site_gen.symmetry 
_struct_site_gen.details 
1  AC1 6  DG  A 6 ? DG  A 6   . ? 1_555 ? 
2  AC1 6  HOH G . ? HOH A 201 . ? 1_555 ? 
3  AC1 6  HOH G . ? HOH A 205 . ? 1_555 ? 
4  AC1 6  HOH G . ? HOH A 210 . ? 1_555 ? 
5  AC1 6  HOH G . ? HOH A 234 . ? 1_555 ? 
6  AC1 6  HOH G . ? HOH A 235 . ? 1_555 ? 
7  AC2 4  DG  B 4 ? DG  B 10  . ? 1_555 ? 
8  AC2 4  DG  B 6 ? DG  B 12  . ? 4_566 ? 
9  AC2 4  CL  E . ? CL  B 102 . ? 1_555 ? 
10 AC2 4  HOH H . ? HOH B 233 . ? 1_555 ? 
11 AC3 4  DG  B 2 ? DG  B 8   . ? 1_555 ? 
12 AC3 4  DG  B 4 ? DG  B 10  . ? 1_555 ? 
13 AC3 4  DG  B 6 ? DG  B 12  . ? 4_566 ? 
14 AC3 4  ZN  D . ? ZN  B 101 . ? 1_555 ? 
15 AC4 12 DG  A 2 ? DG  A 2   . ? 2_665 ? 
16 AC4 12 DC  A 3 ? DC  A 3   . ? 2_665 ? 
17 AC4 12 DG  A 4 ? DG  A 4   . ? 3_656 ? 
18 AC4 12 DC  A 5 ? DC  A 5   . ? 3_656 ? 
19 AC4 12 DG  A 6 ? DG  A 6   . ? 3_656 ? 
20 AC4 12 HOH G . ? HOH A 219 . ? 3_656 ? 
21 AC4 12 HOH G . ? HOH A 229 . ? 2_665 ? 
22 AC4 12 HOH G . ? HOH A 231 . ? 2_665 ? 
23 AC4 12 DC  B 3 ? DC  B 9   . ? 1_555 ? 
24 AC4 12 HOH H . ? HOH B 214 . ? 1_555 ? 
25 AC4 12 HOH H . ? HOH B 237 . ? 1_555 ? 
26 AC4 12 HOH H . ? HOH B 238 . ? 1_555 ? 
# 
_database_PDB_matrix.entry_id          4HIF 
_database_PDB_matrix.origx[1][1]       1.000000 
_database_PDB_matrix.origx[1][2]       0.000000 
_database_PDB_matrix.origx[1][3]       0.000000 
_database_PDB_matrix.origx[2][1]       0.000000 
_database_PDB_matrix.origx[2][2]       1.000000 
_database_PDB_matrix.origx[2][3]       0.000000 
_database_PDB_matrix.origx[3][1]       0.000000 
_database_PDB_matrix.origx[3][2]       0.000000 
_database_PDB_matrix.origx[3][3]       1.000000 
_database_PDB_matrix.origx_vector[1]   0.000000 
_database_PDB_matrix.origx_vector[2]   0.000000 
_database_PDB_matrix.origx_vector[3]   0.000000 
# 
_atom_sites.entry_id                    4HIF 
_atom_sites.fract_transf_matrix[1][1]   0.056208 
_atom_sites.fract_transf_matrix[1][2]   0.000000 
_atom_sites.fract_transf_matrix[1][3]   0.000000 
_atom_sites.fract_transf_matrix[2][1]   0.000000 
_atom_sites.fract_transf_matrix[2][2]   0.032355 
_atom_sites.fract_transf_matrix[2][3]   0.000000 
_atom_sites.fract_transf_matrix[3][1]   0.000000 
_atom_sites.fract_transf_matrix[3][2]   0.000000 
_atom_sites.fract_transf_matrix[3][3]   0.022626 
_atom_sites.fract_transf_vector[1]      0.000000 
_atom_sites.fract_transf_vector[2]      0.000000 
_atom_sites.fract_transf_vector[3]      0.000000 
# 
loop_
_atom_type.symbol 
C  
CL 
N  
O  
P  
ZN 
# 
loop_
_pdbx_poly_seq_scheme.asym_id 
_pdbx_poly_seq_scheme.entity_id 
_pdbx_poly_seq_scheme.seq_id 
_pdbx_poly_seq_scheme.mon_id 
_pdbx_poly_seq_scheme.ndb_seq_num 
_pdbx_poly_seq_scheme.pdb_seq_num 
_pdbx_poly_seq_scheme.auth_seq_num 
_pdbx_poly_seq_scheme.pdb_mon_id 
_pdbx_poly_seq_scheme.auth_mon_id 
_pdbx_poly_seq_scheme.pdb_strand_id 
_pdbx_poly_seq_scheme.pdb_ins_code 
_pdbx_poly_seq_scheme.hetero 
A 1 1 DC 1 1  1  DC DC A . n 
A 1 2 DG 2 2  2  DG DG A . n 
A 1 3 DC 3 3  3  DC DC A . n 
A 1 4 DG 4 4  4  DG DG A . n 
A 1 5 DC 5 5  5  DC DC A . n 
A 1 6 DG 6 6  6  DG DG A . n 
B 1 1 DC 1 7  7  DC DC B . n 
B 1 2 DG 2 8  8  DG DG B . n 
B 1 3 DC 3 9  9  DC DC B . n 
B 1 4 DG 4 10 10 DG DG B . n 
B 1 5 DC 5 11 11 DC DC B . n 
B 1 6 DG 6 12 12 DG DG B . n 
# 
loop_
_pdbx_nonpoly_scheme.asym_id 
_pdbx_nonpoly_scheme.entity_id 
_pdbx_nonpoly_scheme.mon_id 
_pdbx_nonpoly_scheme.ndb_seq_num 
_pdbx_nonpoly_scheme.pdb_seq_num 
_pdbx_nonpoly_scheme.auth_seq_num 
_pdbx_nonpoly_scheme.pdb_mon_id 
_pdbx_nonpoly_scheme.auth_mon_id 
_pdbx_nonpoly_scheme.pdb_strand_id 
_pdbx_nonpoly_scheme.pdb_ins_code 
C 2 ZN  1  101 14 ZN  ZN  A . 
D 2 ZN  1  101 13 ZN  ZN  B . 
E 3 CL  1  102 15 CL  CL  B . 
F 4 SPK 1  103 16 SPK SPK B . 
G 5 HOH 1  201 21 HOH HOH A . 
G 5 HOH 2  202 24 HOH HOH A . 
G 5 HOH 3  203 25 HOH HOH A . 
G 5 HOH 4  204 27 HOH HOH A . 
G 5 HOH 5  205 28 HOH HOH A . 
G 5 HOH 6  206 30 HOH HOH A . 
G 5 HOH 7  207 32 HOH HOH A . 
G 5 HOH 8  208 33 HOH HOH A . 
G 5 HOH 9  209 35 HOH HOH A . 
G 5 HOH 10 210 42 HOH HOH A . 
G 5 HOH 11 211 44 HOH HOH A . 
G 5 HOH 12 212 45 HOH HOH A . 
G 5 HOH 13 213 46 HOH HOH A . 
G 5 HOH 14 214 47 HOH HOH A . 
G 5 HOH 15 215 48 HOH HOH A . 
G 5 HOH 16 216 50 HOH HOH A . 
G 5 HOH 17 217 52 HOH HOH A . 
G 5 HOH 18 218 53 HOH HOH A . 
G 5 HOH 19 219 54 HOH HOH A . 
G 5 HOH 20 220 59 HOH HOH A . 
G 5 HOH 21 221 60 HOH HOH A . 
G 5 HOH 22 222 61 HOH HOH A . 
G 5 HOH 23 223 68 HOH HOH A . 
G 5 HOH 24 224 69 HOH HOH A . 
G 5 HOH 25 225 70 HOH HOH A . 
G 5 HOH 26 226 71 HOH HOH A . 
G 5 HOH 27 227 72 HOH HOH A . 
G 5 HOH 28 228 73 HOH HOH A . 
G 5 HOH 29 229 74 HOH HOH A . 
G 5 HOH 30 230 76 HOH HOH A . 
G 5 HOH 31 231 79 HOH HOH A . 
G 5 HOH 32 232 80 HOH HOH A . 
G 5 HOH 33 233 81 HOH HOH A . 
G 5 HOH 34 234 82 HOH HOH A . 
G 5 HOH 35 235 83 HOH HOH A . 
G 5 HOH 36 236 87 HOH HOH A . 
H 5 HOH 1  201 17 HOH HOH B . 
H 5 HOH 2  202 18 HOH HOH B . 
H 5 HOH 3  203 19 HOH HOH B . 
H 5 HOH 4  204 20 HOH HOH B . 
H 5 HOH 5  205 22 HOH HOH B . 
H 5 HOH 6  206 23 HOH HOH B . 
H 5 HOH 7  207 26 HOH HOH B . 
H 5 HOH 8  208 29 HOH HOH B . 
H 5 HOH 9  209 31 HOH HOH B . 
H 5 HOH 10 210 34 HOH HOH B . 
H 5 HOH 11 211 36 HOH HOH B . 
H 5 HOH 12 212 37 HOH HOH B . 
H 5 HOH 13 213 38 HOH HOH B . 
H 5 HOH 14 214 39 HOH HOH B . 
H 5 HOH 15 215 40 HOH HOH B . 
H 5 HOH 16 216 41 HOH HOH B . 
H 5 HOH 17 217 43 HOH HOH B . 
H 5 HOH 18 218 49 HOH HOH B . 
H 5 HOH 19 219 51 HOH HOH B . 
H 5 HOH 20 220 55 HOH HOH B . 
H 5 HOH 21 221 56 HOH HOH B . 
H 5 HOH 22 222 57 HOH HOH B . 
H 5 HOH 23 223 58 HOH HOH B . 
H 5 HOH 24 224 62 HOH HOH B . 
H 5 HOH 25 225 63 HOH HOH B . 
H 5 HOH 26 226 64 HOH HOH B . 
H 5 HOH 27 227 65 HOH HOH B . 
H 5 HOH 28 228 66 HOH HOH B . 
H 5 HOH 29 229 67 HOH HOH B . 
H 5 HOH 30 230 75 HOH HOH B . 
H 5 HOH 31 231 77 HOH HOH B . 
H 5 HOH 32 232 78 HOH HOH B . 
H 5 HOH 33 233 84 HOH HOH B . 
H 5 HOH 34 234 85 HOH HOH B . 
H 5 HOH 35 235 86 HOH HOH B . 
H 5 HOH 36 236 88 HOH HOH B . 
H 5 HOH 37 237 89 HOH HOH B . 
H 5 HOH 38 238 90 HOH HOH B . 
H 5 HOH 39 239 91 HOH HOH B . 
# 
_pdbx_struct_assembly.id                   1 
_pdbx_struct_assembly.details              author_and_software_defined_assembly 
_pdbx_struct_assembly.method_details       PISA 
_pdbx_struct_assembly.oligomeric_details   dimeric 
_pdbx_struct_assembly.oligomeric_count     2 
# 
_pdbx_struct_assembly_gen.assembly_id       1 
_pdbx_struct_assembly_gen.oper_expression   1 
_pdbx_struct_assembly_gen.asym_id_list      A,B,C,D,E,F,G,H 
# 
loop_
_pdbx_struct_assembly_prop.biol_id 
_pdbx_struct_assembly_prop.type 
_pdbx_struct_assembly_prop.value 
_pdbx_struct_assembly_prop.details 
1 'ABSA (A^2)' 630  ? 
1 MORE         -5   ? 
1 'SSA (A^2)'  2340 ? 
# 
_pdbx_struct_oper_list.id                   1 
_pdbx_struct_oper_list.type                 'identity operation' 
_pdbx_struct_oper_list.name                 1_555 
_pdbx_struct_oper_list.symmetry_operation   x,y,z 
_pdbx_struct_oper_list.matrix[1][1]         1.0000000000 
_pdbx_struct_oper_list.matrix[1][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[1][3]         0.0000000000 
_pdbx_struct_oper_list.vector[1]            0.0000000000 
_pdbx_struct_oper_list.matrix[2][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[2][2]         1.0000000000 
_pdbx_struct_oper_list.matrix[2][3]         0.0000000000 
_pdbx_struct_oper_list.vector[2]            0.0000000000 
_pdbx_struct_oper_list.matrix[3][1]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][2]         0.0000000000 
_pdbx_struct_oper_list.matrix[3][3]         1.0000000000 
_pdbx_struct_oper_list.vector[3]            0.0000000000 
# 
loop_
_pdbx_struct_conn_angle.id 
_pdbx_struct_conn_angle.ptnr1_label_atom_id 
_pdbx_struct_conn_angle.ptnr1_label_alt_id 
_pdbx_struct_conn_angle.ptnr1_label_asym_id 
_pdbx_struct_conn_angle.ptnr1_label_comp_id 
_pdbx_struct_conn_angle.ptnr1_label_seq_id 
_pdbx_struct_conn_angle.ptnr1_auth_atom_id 
_pdbx_struct_conn_angle.ptnr1_auth_asym_id 
_pdbx_struct_conn_angle.ptnr1_auth_comp_id 
_pdbx_struct_conn_angle.ptnr1_auth_seq_id 
_pdbx_struct_conn_angle.ptnr1_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr1_symmetry 
_pdbx_struct_conn_angle.ptnr2_label_atom_id 
_pdbx_struct_conn_angle.ptnr2_label_alt_id 
_pdbx_struct_conn_angle.ptnr2_label_asym_id 
_pdbx_struct_conn_angle.ptnr2_label_comp_id 
_pdbx_struct_conn_angle.ptnr2_label_seq_id 
_pdbx_struct_conn_angle.ptnr2_auth_atom_id 
_pdbx_struct_conn_angle.ptnr2_auth_asym_id 
_pdbx_struct_conn_angle.ptnr2_auth_comp_id 
_pdbx_struct_conn_angle.ptnr2_auth_seq_id 
_pdbx_struct_conn_angle.ptnr2_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr2_symmetry 
_pdbx_struct_conn_angle.ptnr3_label_atom_id 
_pdbx_struct_conn_angle.ptnr3_label_alt_id 
_pdbx_struct_conn_angle.ptnr3_label_asym_id 
_pdbx_struct_conn_angle.ptnr3_label_comp_id 
_pdbx_struct_conn_angle.ptnr3_label_seq_id 
_pdbx_struct_conn_angle.ptnr3_auth_atom_id 
_pdbx_struct_conn_angle.ptnr3_auth_asym_id 
_pdbx_struct_conn_angle.ptnr3_auth_comp_id 
_pdbx_struct_conn_angle.ptnr3_auth_seq_id 
_pdbx_struct_conn_angle.ptnr3_PDB_ins_code 
_pdbx_struct_conn_angle.ptnr3_symmetry 
_pdbx_struct_conn_angle.value 
_pdbx_struct_conn_angle.value_esd 
1  N7 ? A DG  6 ? A DG  6   ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 201 ? 1_555 90.2  ? 
2  N7 ? A DG  6 ? A DG  6   ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 205 ? 1_555 92.9  ? 
3  O  ? G HOH . ? A HOH 201 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 205 ? 1_555 87.1  ? 
4  N7 ? A DG  6 ? A DG  6   ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 210 ? 1_555 92.2  ? 
5  O  ? G HOH . ? A HOH 201 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 210 ? 1_555 177.5 ? 
6  O  ? G HOH . ? A HOH 205 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 210 ? 1_555 93.3  ? 
7  N7 ? A DG  6 ? A DG  6   ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 234 ? 1_555 86.2  ? 
8  O  ? G HOH . ? A HOH 201 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 234 ? 1_555 91.3  ? 
9  O  ? G HOH . ? A HOH 205 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 234 ? 1_555 178.1 ? 
10 O  ? G HOH . ? A HOH 210 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 234 ? 1_555 88.4  ? 
11 N7 ? A DG  6 ? A DG  6   ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 235 ? 1_555 176.3 ? 
12 O  ? G HOH . ? A HOH 201 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 235 ? 1_555 88.2  ? 
13 O  ? G HOH . ? A HOH 205 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 235 ? 1_555 90.4  ? 
14 O  ? G HOH . ? A HOH 210 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 235 ? 1_555 89.3  ? 
15 O  ? G HOH . ? A HOH 234 ? 1_555 ZN ? C ZN . ? A ZN 101 ? 1_555 O ? G HOH . ? A HOH 235 ? 1_555 90.5  ? 
16 N7 ? B DG  4 ? B DG  10  ? 1_555 ZN ? D ZN . ? B ZN 101 ? 1_555 O ? H HOH . ? B HOH 233 ? 1_555 111.0 ? 
# 
loop_
_pdbx_audit_revision_history.ordinal 
_pdbx_audit_revision_history.data_content_type 
_pdbx_audit_revision_history.major_revision 
_pdbx_audit_revision_history.minor_revision 
_pdbx_audit_revision_history.revision_date 
1 'Structure model' 1 0 2013-06-05 
2 'Structure model' 1 1 2017-09-27 
3 'Structure model' 1 2 2023-09-20 
# 
_pdbx_audit_revision_details.ordinal             1 
_pdbx_audit_revision_details.revision_ordinal    1 
_pdbx_audit_revision_details.data_content_type   'Structure model' 
_pdbx_audit_revision_details.provider            repository 
_pdbx_audit_revision_details.type                'Initial release' 
_pdbx_audit_revision_details.description         ? 
_pdbx_audit_revision_details.details             ? 
# 
loop_
_pdbx_audit_revision_group.ordinal 
_pdbx_audit_revision_group.revision_ordinal 
_pdbx_audit_revision_group.data_content_type 
_pdbx_audit_revision_group.group 
1 2 'Structure model' Advisory                 
2 2 'Structure model' 'Data collection'        
3 3 'Structure model' Advisory                 
4 3 'Structure model' 'Data collection'        
5 3 'Structure model' 'Database references'    
6 3 'Structure model' 'Derived calculations'   
7 3 'Structure model' 'Refinement description' 
# 
loop_
_pdbx_audit_revision_category.ordinal 
_pdbx_audit_revision_category.revision_ordinal 
_pdbx_audit_revision_category.data_content_type 
_pdbx_audit_revision_category.category 
1  2 'Structure model' diffrn_detector               
2  2 'Structure model' pdbx_unobs_or_zero_occ_atoms  
3  3 'Structure model' chem_comp_atom                
4  3 'Structure model' chem_comp_bond                
5  3 'Structure model' database_2                    
6  3 'Structure model' diffrn_source                 
7  3 'Structure model' pdbx_initial_refinement_model 
8  3 'Structure model' pdbx_struct_conn_angle        
9  3 'Structure model' pdbx_unobs_or_zero_occ_atoms  
10 3 'Structure model' struct_conn                   
11 3 'Structure model' struct_site                   
# 
loop_
_pdbx_audit_revision_item.ordinal 
_pdbx_audit_revision_item.revision_ordinal 
_pdbx_audit_revision_item.data_content_type 
_pdbx_audit_revision_item.item 
1  2 'Structure model' '_diffrn_detector.detector'                   
2  3 'Structure model' '_database_2.pdbx_DOI'                        
3  3 'Structure model' '_database_2.pdbx_database_accession'         
4  3 'Structure model' '_diffrn_source.pdbx_synchrotron_site'        
5  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_asym_id'  
6  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_comp_id'  
7  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_auth_seq_id'   
8  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_asym_id' 
9  3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_atom_id' 
10 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_comp_id' 
11 3 'Structure model' '_pdbx_struct_conn_angle.ptnr1_label_seq_id'  
12 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_auth_asym_id'  
13 3 'Structure model' '_pdbx_struct_conn_angle.ptnr2_label_asym_id' 
14 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_asym_id'  
15 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_auth_seq_id'   
16 3 'Structure model' '_pdbx_struct_conn_angle.ptnr3_label_asym_id' 
17 3 'Structure model' '_pdbx_struct_conn_angle.value'               
18 3 'Structure model' '_struct_conn.pdbx_dist_value'                
19 3 'Structure model' '_struct_conn.ptnr1_auth_asym_id'             
20 3 'Structure model' '_struct_conn.ptnr1_auth_comp_id'             
21 3 'Structure model' '_struct_conn.ptnr1_auth_seq_id'              
22 3 'Structure model' '_struct_conn.ptnr1_label_asym_id'            
23 3 'Structure model' '_struct_conn.ptnr1_label_atom_id'            
24 3 'Structure model' '_struct_conn.ptnr1_label_comp_id'            
25 3 'Structure model' '_struct_conn.ptnr1_label_seq_id'             
26 3 'Structure model' '_struct_conn.ptnr2_auth_asym_id'             
27 3 'Structure model' '_struct_conn.ptnr2_auth_comp_id'             
28 3 'Structure model' '_struct_conn.ptnr2_auth_seq_id'              
29 3 'Structure model' '_struct_conn.ptnr2_label_asym_id'            
30 3 'Structure model' '_struct_conn.ptnr2_label_atom_id'            
31 3 'Structure model' '_struct_conn.ptnr2_label_comp_id'            
32 3 'Structure model' '_struct_site.pdbx_auth_asym_id'              
33 3 'Structure model' '_struct_site.pdbx_auth_comp_id'              
34 3 'Structure model' '_struct_site.pdbx_auth_seq_id'               
# 
loop_
_software.name 
_software.classification 
_software.version 
_software.citation_id 
_software.pdbx_ordinal 
MAR345dtb 'data collection' . ? 1 
PHASER    phasing           . ? 2 
SHELXL-97 refinement        . ? 3 
XDS       'data reduction'  . ? 4 
XDS       'data scaling'    . ? 5 
# 
_pdbx_validate_close_contact.id               1 
_pdbx_validate_close_contact.PDB_model_num    1 
_pdbx_validate_close_contact.auth_atom_id_1   N7 
_pdbx_validate_close_contact.auth_asym_id_1   A 
_pdbx_validate_close_contact.auth_comp_id_1   DG 
_pdbx_validate_close_contact.auth_seq_id_1    4 
_pdbx_validate_close_contact.PDB_ins_code_1   ? 
_pdbx_validate_close_contact.label_alt_id_1   ? 
_pdbx_validate_close_contact.auth_atom_id_2   O 
_pdbx_validate_close_contact.auth_asym_id_2   A 
_pdbx_validate_close_contact.auth_comp_id_2   HOH 
_pdbx_validate_close_contact.auth_seq_id_2    232 
_pdbx_validate_close_contact.PDB_ins_code_2   ? 
_pdbx_validate_close_contact.label_alt_id_2   ? 
_pdbx_validate_close_contact.dist             2.16 
# 
loop_
_pdbx_validate_rmsd_bond.id 
_pdbx_validate_rmsd_bond.PDB_model_num 
_pdbx_validate_rmsd_bond.auth_atom_id_1 
_pdbx_validate_rmsd_bond.auth_asym_id_1 
_pdbx_validate_rmsd_bond.auth_comp_id_1 
_pdbx_validate_rmsd_bond.auth_seq_id_1 
_pdbx_validate_rmsd_bond.PDB_ins_code_1 
_pdbx_validate_rmsd_bond.label_alt_id_1 
_pdbx_validate_rmsd_bond.auth_atom_id_2 
_pdbx_validate_rmsd_bond.auth_asym_id_2 
_pdbx_validate_rmsd_bond.auth_comp_id_2 
_pdbx_validate_rmsd_bond.auth_seq_id_2 
_pdbx_validate_rmsd_bond.PDB_ins_code_2 
_pdbx_validate_rmsd_bond.label_alt_id_2 
_pdbx_validate_rmsd_bond.bond_value 
_pdbx_validate_rmsd_bond.bond_target_value 
_pdbx_validate_rmsd_bond.bond_deviation 
_pdbx_validate_rmsd_bond.bond_standard_deviation 
_pdbx_validate_rmsd_bond.linker_flag 
1 1 N7    A DG 2  ? ? C8    A DG 2  ? ? 1.265 1.305 -0.040 0.006 N 
2 1 N7    A DG 6  ? ? C8    A DG 6  ? ? 1.341 1.305 0.036  0.006 N 
3 1 "C3'" B DG 12 ? B "C2'" B DG 12 ? ? 1.451 1.516 -0.065 0.008 N 
# 
loop_
_pdbx_validate_rmsd_angle.id 
_pdbx_validate_rmsd_angle.PDB_model_num 
_pdbx_validate_rmsd_angle.auth_atom_id_1 
_pdbx_validate_rmsd_angle.auth_asym_id_1 
_pdbx_validate_rmsd_angle.auth_comp_id_1 
_pdbx_validate_rmsd_angle.auth_seq_id_1 
_pdbx_validate_rmsd_angle.PDB_ins_code_1 
_pdbx_validate_rmsd_angle.label_alt_id_1 
_pdbx_validate_rmsd_angle.auth_atom_id_2 
_pdbx_validate_rmsd_angle.auth_asym_id_2 
_pdbx_validate_rmsd_angle.auth_comp_id_2 
_pdbx_validate_rmsd_angle.auth_seq_id_2 
_pdbx_validate_rmsd_angle.PDB_ins_code_2 
_pdbx_validate_rmsd_angle.label_alt_id_2 
_pdbx_validate_rmsd_angle.auth_atom_id_3 
_pdbx_validate_rmsd_angle.auth_asym_id_3 
_pdbx_validate_rmsd_angle.auth_comp_id_3 
_pdbx_validate_rmsd_angle.auth_seq_id_3 
_pdbx_validate_rmsd_angle.PDB_ins_code_3 
_pdbx_validate_rmsd_angle.label_alt_id_3 
_pdbx_validate_rmsd_angle.angle_value 
_pdbx_validate_rmsd_angle.angle_target_value 
_pdbx_validate_rmsd_angle.angle_deviation 
_pdbx_validate_rmsd_angle.angle_standard_deviation 
_pdbx_validate_rmsd_angle.linker_flag 
1 1 "C3'" A DC 1  ? ? "O3'" A DC 1  ? B P     A DG 2  ? B 110.53 119.70 -9.17  1.20 Y 
2 1 "O3'" A DC 1  ? B P     A DG 2  ? B OP1   A DG 2  ? B 126.29 110.50 15.79  1.10 Y 
3 1 "O5'" A DG 2  ? B "C5'" A DG 2  ? ? "C4'" A DG 2  ? ? 94.26  109.40 -15.14 0.80 N 
4 1 "O4'" A DC 3  ? ? "C4'" A DC 3  ? ? "C3'" A DC 3  ? A 110.00 106.00 4.00   0.60 N 
5 1 "C5'" A DC 3  ? ? "C4'" A DC 3  ? ? "C3'" A DC 3  ? B 127.33 115.70 11.63  1.20 N 
6 1 "C3'" A DC 3  ? B "C2'" A DC 3  ? ? "C1'" A DC 3  ? ? 94.79  102.40 -7.61  0.80 N 
7 1 "O5'" A DG 4  ? A "C5'" A DG 4  ? ? "C4'" A DG 4  ? ? 102.12 109.40 -7.28  0.80 N 
8 1 "C5'" B DG 12 ? ? "C4'" B DG 12 ? ? "C3'" B DG 12 ? A 134.12 115.70 18.42  1.20 N 
9 1 "C4'" B DG 12 ? ? "C3'" B DG 12 ? A "O3'" B DG 12 ? A 125.74 112.30 13.44  2.00 N 
# 
_pdbx_unobs_or_zero_occ_atoms.id               1 
_pdbx_unobs_or_zero_occ_atoms.PDB_model_num    1 
_pdbx_unobs_or_zero_occ_atoms.polymer_flag     N 
_pdbx_unobs_or_zero_occ_atoms.occupancy_flag   0 
_pdbx_unobs_or_zero_occ_atoms.auth_asym_id     B 
_pdbx_unobs_or_zero_occ_atoms.auth_comp_id     SPK 
_pdbx_unobs_or_zero_occ_atoms.auth_seq_id      103 
_pdbx_unobs_or_zero_occ_atoms.PDB_ins_code     ? 
_pdbx_unobs_or_zero_occ_atoms.auth_atom_id     C8 
_pdbx_unobs_or_zero_occ_atoms.label_alt_id     ? 
_pdbx_unobs_or_zero_occ_atoms.label_asym_id    F 
_pdbx_unobs_or_zero_occ_atoms.label_comp_id    SPK 
_pdbx_unobs_or_zero_occ_atoms.label_seq_id     ? 
_pdbx_unobs_or_zero_occ_atoms.label_atom_id    C8 
# 
loop_
_chem_comp_atom.comp_id 
_chem_comp_atom.atom_id 
_chem_comp_atom.type_symbol 
_chem_comp_atom.pdbx_aromatic_flag 
_chem_comp_atom.pdbx_stereo_config 
_chem_comp_atom.pdbx_ordinal 
CL  CL     CL N N 1   
DC  OP3    O  N N 2   
DC  P      P  N N 3   
DC  OP1    O  N N 4   
DC  OP2    O  N N 5   
DC  "O5'"  O  N N 6   
DC  "C5'"  C  N N 7   
DC  "C4'"  C  N R 8   
DC  "O4'"  O  N N 9   
DC  "C3'"  C  N S 10  
DC  "O3'"  O  N N 11  
DC  "C2'"  C  N N 12  
DC  "C1'"  C  N R 13  
DC  N1     N  N N 14  
DC  C2     C  N N 15  
DC  O2     O  N N 16  
DC  N3     N  N N 17  
DC  C4     C  N N 18  
DC  N4     N  N N 19  
DC  C5     C  N N 20  
DC  C6     C  N N 21  
DC  HOP3   H  N N 22  
DC  HOP2   H  N N 23  
DC  "H5'"  H  N N 24  
DC  "H5''" H  N N 25  
DC  "H4'"  H  N N 26  
DC  "H3'"  H  N N 27  
DC  "HO3'" H  N N 28  
DC  "H2'"  H  N N 29  
DC  "H2''" H  N N 30  
DC  "H1'"  H  N N 31  
DC  H41    H  N N 32  
DC  H42    H  N N 33  
DC  H5     H  N N 34  
DC  H6     H  N N 35  
DG  OP3    O  N N 36  
DG  P      P  N N 37  
DG  OP1    O  N N 38  
DG  OP2    O  N N 39  
DG  "O5'"  O  N N 40  
DG  "C5'"  C  N N 41  
DG  "C4'"  C  N R 42  
DG  "O4'"  O  N N 43  
DG  "C3'"  C  N S 44  
DG  "O3'"  O  N N 45  
DG  "C2'"  C  N N 46  
DG  "C1'"  C  N R 47  
DG  N9     N  Y N 48  
DG  C8     C  Y N 49  
DG  N7     N  Y N 50  
DG  C5     C  Y N 51  
DG  C6     C  N N 52  
DG  O6     O  N N 53  
DG  N1     N  N N 54  
DG  C2     C  N N 55  
DG  N2     N  N N 56  
DG  N3     N  N N 57  
DG  C4     C  Y N 58  
DG  HOP3   H  N N 59  
DG  HOP2   H  N N 60  
DG  "H5'"  H  N N 61  
DG  "H5''" H  N N 62  
DG  "H4'"  H  N N 63  
DG  "H3'"  H  N N 64  
DG  "HO3'" H  N N 65  
DG  "H2'"  H  N N 66  
DG  "H2''" H  N N 67  
DG  "H1'"  H  N N 68  
DG  H8     H  N N 69  
DG  H1     H  N N 70  
DG  H21    H  N N 71  
DG  H22    H  N N 72  
HOH O      O  N N 73  
HOH H1     H  N N 74  
HOH H2     H  N N 75  
SPK N1     N  N N 76  
SPK C2     C  N N 77  
SPK C3     C  N N 78  
SPK C4     C  N N 79  
SPK N5     N  N N 80  
SPK C6     C  N N 81  
SPK C7     C  N N 82  
SPK C8     C  N N 83  
SPK C9     C  N N 84  
SPK N10    N  N N 85  
SPK C11    C  N N 86  
SPK C12    C  N N 87  
SPK C13    C  N N 88  
SPK N14    N  N N 89  
SPK H1A    H  N N 90  
SPK H1B    H  N N 91  
SPK H1C    H  N N 92  
SPK H2A    H  N N 93  
SPK H2B    H  N N 94  
SPK H3A    H  N N 95  
SPK H3B    H  N N 96  
SPK H4A    H  N N 97  
SPK H4B    H  N N 98  
SPK H5A    H  N N 99  
SPK H5B    H  N N 100 
SPK H6A    H  N N 101 
SPK H6B    H  N N 102 
SPK H7A    H  N N 103 
SPK H7B    H  N N 104 
SPK H8A    H  N N 105 
SPK H8B    H  N N 106 
SPK H9A    H  N N 107 
SPK H9B    H  N N 108 
SPK H101   H  N N 109 
SPK H102   H  N N 110 
SPK H111   H  N N 111 
SPK H112   H  N N 112 
SPK H121   H  N N 113 
SPK H122   H  N N 114 
SPK H131   H  N N 115 
SPK H132   H  N N 116 
SPK H141   H  N N 117 
SPK H142   H  N N 118 
SPK H143   H  N N 119 
ZN  ZN     ZN N N 120 
# 
loop_
_chem_comp_bond.comp_id 
_chem_comp_bond.atom_id_1 
_chem_comp_bond.atom_id_2 
_chem_comp_bond.value_order 
_chem_comp_bond.pdbx_aromatic_flag 
_chem_comp_bond.pdbx_stereo_config 
_chem_comp_bond.pdbx_ordinal 
DC  OP3   P      sing N N 1   
DC  OP3   HOP3   sing N N 2   
DC  P     OP1    doub N N 3   
DC  P     OP2    sing N N 4   
DC  P     "O5'"  sing N N 5   
DC  OP2   HOP2   sing N N 6   
DC  "O5'" "C5'"  sing N N 7   
DC  "C5'" "C4'"  sing N N 8   
DC  "C5'" "H5'"  sing N N 9   
DC  "C5'" "H5''" sing N N 10  
DC  "C4'" "O4'"  sing N N 11  
DC  "C4'" "C3'"  sing N N 12  
DC  "C4'" "H4'"  sing N N 13  
DC  "O4'" "C1'"  sing N N 14  
DC  "C3'" "O3'"  sing N N 15  
DC  "C3'" "C2'"  sing N N 16  
DC  "C3'" "H3'"  sing N N 17  
DC  "O3'" "HO3'" sing N N 18  
DC  "C2'" "C1'"  sing N N 19  
DC  "C2'" "H2'"  sing N N 20  
DC  "C2'" "H2''" sing N N 21  
DC  "C1'" N1     sing N N 22  
DC  "C1'" "H1'"  sing N N 23  
DC  N1    C2     sing N N 24  
DC  N1    C6     sing N N 25  
DC  C2    O2     doub N N 26  
DC  C2    N3     sing N N 27  
DC  N3    C4     doub N N 28  
DC  C4    N4     sing N N 29  
DC  C4    C5     sing N N 30  
DC  N4    H41    sing N N 31  
DC  N4    H42    sing N N 32  
DC  C5    C6     doub N N 33  
DC  C5    H5     sing N N 34  
DC  C6    H6     sing N N 35  
DG  OP3   P      sing N N 36  
DG  OP3   HOP3   sing N N 37  
DG  P     OP1    doub N N 38  
DG  P     OP2    sing N N 39  
DG  P     "O5'"  sing N N 40  
DG  OP2   HOP2   sing N N 41  
DG  "O5'" "C5'"  sing N N 42  
DG  "C5'" "C4'"  sing N N 43  
DG  "C5'" "H5'"  sing N N 44  
DG  "C5'" "H5''" sing N N 45  
DG  "C4'" "O4'"  sing N N 46  
DG  "C4'" "C3'"  sing N N 47  
DG  "C4'" "H4'"  sing N N 48  
DG  "O4'" "C1'"  sing N N 49  
DG  "C3'" "O3'"  sing N N 50  
DG  "C3'" "C2'"  sing N N 51  
DG  "C3'" "H3'"  sing N N 52  
DG  "O3'" "HO3'" sing N N 53  
DG  "C2'" "C1'"  sing N N 54  
DG  "C2'" "H2'"  sing N N 55  
DG  "C2'" "H2''" sing N N 56  
DG  "C1'" N9     sing N N 57  
DG  "C1'" "H1'"  sing N N 58  
DG  N9    C8     sing Y N 59  
DG  N9    C4     sing Y N 60  
DG  C8    N7     doub Y N 61  
DG  C8    H8     sing N N 62  
DG  N7    C5     sing Y N 63  
DG  C5    C6     sing N N 64  
DG  C5    C4     doub Y N 65  
DG  C6    O6     doub N N 66  
DG  C6    N1     sing N N 67  
DG  N1    C2     sing N N 68  
DG  N1    H1     sing N N 69  
DG  C2    N2     sing N N 70  
DG  C2    N3     doub N N 71  
DG  N2    H21    sing N N 72  
DG  N2    H22    sing N N 73  
DG  N3    C4     sing N N 74  
HOH O     H1     sing N N 75  
HOH O     H2     sing N N 76  
SPK N1    C2     sing N N 77  
SPK N1    H1A    sing N N 78  
SPK N1    H1B    sing N N 79  
SPK N1    H1C    sing N N 80  
SPK C2    C3     sing N N 81  
SPK C2    H2A    sing N N 82  
SPK C2    H2B    sing N N 83  
SPK C3    C4     sing N N 84  
SPK C3    H3A    sing N N 85  
SPK C3    H3B    sing N N 86  
SPK C4    N5     sing N N 87  
SPK C4    H4A    sing N N 88  
SPK C4    H4B    sing N N 89  
SPK N5    C6     sing N N 90  
SPK N5    H5A    sing N N 91  
SPK N5    H5B    sing N N 92  
SPK C6    C7     sing N N 93  
SPK C6    H6A    sing N N 94  
SPK C6    H6B    sing N N 95  
SPK C7    C8     sing N N 96  
SPK C7    H7A    sing N N 97  
SPK C7    H7B    sing N N 98  
SPK C8    C9     sing N N 99  
SPK C8    H8A    sing N N 100 
SPK C8    H8B    sing N N 101 
SPK C9    N10    sing N N 102 
SPK C9    H9A    sing N N 103 
SPK C9    H9B    sing N N 104 
SPK N10   C11    sing N N 105 
SPK N10   H101   sing N N 106 
SPK N10   H102   sing N N 107 
SPK C11   C12    sing N N 108 
SPK C11   H111   sing N N 109 
SPK C11   H112   sing N N 110 
SPK C12   C13    sing N N 111 
SPK C12   H121   sing N N 112 
SPK C12   H122   sing N N 113 
SPK C13   N14    sing N N 114 
SPK C13   H131   sing N N 115 
SPK C13   H132   sing N N 116 
SPK N14   H141   sing N N 117 
SPK N14   H142   sing N N 118 
SPK N14   H143   sing N N 119 
# 
_ndb_struct_conf_na.entry_id   4HIF 
_ndb_struct_conf_na.feature    'z-form double helix' 
# 
loop_
_ndb_struct_na_base_pair.model_number 
_ndb_struct_na_base_pair.i_label_asym_id 
_ndb_struct_na_base_pair.i_label_comp_id 
_ndb_struct_na_base_pair.i_label_seq_id 
_ndb_struct_na_base_pair.i_symmetry 
_ndb_struct_na_base_pair.j_label_asym_id 
_ndb_struct_na_base_pair.j_label_comp_id 
_ndb_struct_na_base_pair.j_label_seq_id 
_ndb_struct_na_base_pair.j_symmetry 
_ndb_struct_na_base_pair.shear 
_ndb_struct_na_base_pair.stretch 
_ndb_struct_na_base_pair.stagger 
_ndb_struct_na_base_pair.buckle 
_ndb_struct_na_base_pair.propeller 
_ndb_struct_na_base_pair.opening 
_ndb_struct_na_base_pair.pair_number 
_ndb_struct_na_base_pair.pair_name 
_ndb_struct_na_base_pair.i_auth_asym_id 
_ndb_struct_na_base_pair.i_auth_seq_id 
_ndb_struct_na_base_pair.i_PDB_ins_code 
_ndb_struct_na_base_pair.j_auth_asym_id 
_ndb_struct_na_base_pair.j_auth_seq_id 
_ndb_struct_na_base_pair.j_PDB_ins_code 
_ndb_struct_na_base_pair.hbond_type_28 
_ndb_struct_na_base_pair.hbond_type_12 
1 A DC 1 1_555 B DG 6 1_555 -0.306 -0.151 0.049  1.014  4.461  0.616 1 A_DC1:DG12_B A 1 ? B 12 ? 19 1 
1 A DG 2 1_555 B DC 5 1_555 0.319  -0.112 0.007  -2.983 -4.493 1.804 2 A_DG2:DC11_B A 2 ? B 11 ? 19 1 
1 A DC 3 1_555 B DG 4 1_555 -0.225 -0.137 -0.074 10.879 -7.718 1.299 3 A_DC3:DG10_B A 3 ? B 10 ? 19 1 
1 A DG 4 1_555 B DC 3 1_555 0.268  -0.113 0.068  -9.983 -4.674 1.505 4 A_DG4:DC9_B  A 4 ? B 9  ? 19 1 
1 A DC 5 1_555 B DG 2 1_555 -0.142 -0.123 0.018  2.410  0.399  2.510 5 A_DC5:DG8_B  A 5 ? B 8  ? 19 1 
1 A DG 6 1_555 B DC 1 1_555 0.188  -0.179 0.067  -1.486 5.948  2.242 6 A_DG6:DC7_B  A 6 ? B 7  ? 19 1 
# 
loop_
_ndb_struct_na_base_pair_step.model_number 
_ndb_struct_na_base_pair_step.i_label_asym_id_1 
_ndb_struct_na_base_pair_step.i_label_comp_id_1 
_ndb_struct_na_base_pair_step.i_label_seq_id_1 
_ndb_struct_na_base_pair_step.i_symmetry_1 
_ndb_struct_na_base_pair_step.j_label_asym_id_1 
_ndb_struct_na_base_pair_step.j_label_comp_id_1 
_ndb_struct_na_base_pair_step.j_label_seq_id_1 
_ndb_struct_na_base_pair_step.j_symmetry_1 
_ndb_struct_na_base_pair_step.i_label_asym_id_2 
_ndb_struct_na_base_pair_step.i_label_comp_id_2 
_ndb_struct_na_base_pair_step.i_label_seq_id_2 
_ndb_struct_na_base_pair_step.i_symmetry_2 
_ndb_struct_na_base_pair_step.j_label_asym_id_2 
_ndb_struct_na_base_pair_step.j_label_comp_id_2 
_ndb_struct_na_base_pair_step.j_label_seq_id_2 
_ndb_struct_na_base_pair_step.j_symmetry_2 
_ndb_struct_na_base_pair_step.shift 
_ndb_struct_na_base_pair_step.slide 
_ndb_struct_na_base_pair_step.rise 
_ndb_struct_na_base_pair_step.tilt 
_ndb_struct_na_base_pair_step.roll 
_ndb_struct_na_base_pair_step.twist 
_ndb_struct_na_base_pair_step.x_displacement 
_ndb_struct_na_base_pair_step.y_displacement 
_ndb_struct_na_base_pair_step.helical_rise 
_ndb_struct_na_base_pair_step.inclination 
_ndb_struct_na_base_pair_step.tip 
_ndb_struct_na_base_pair_step.helical_twist 
_ndb_struct_na_base_pair_step.step_number 
_ndb_struct_na_base_pair_step.step_name 
_ndb_struct_na_base_pair_step.i_auth_asym_id_1 
_ndb_struct_na_base_pair_step.i_auth_seq_id_1 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.j_auth_asym_id_1 
_ndb_struct_na_base_pair_step.j_auth_seq_id_1 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_1 
_ndb_struct_na_base_pair_step.i_auth_asym_id_2 
_ndb_struct_na_base_pair_step.i_auth_seq_id_2 
_ndb_struct_na_base_pair_step.i_PDB_ins_code_2 
_ndb_struct_na_base_pair_step.j_auth_asym_id_2 
_ndb_struct_na_base_pair_step.j_auth_seq_id_2 
_ndb_struct_na_base_pair_step.j_PDB_ins_code_2 
1 A DC 1 1_555 B DG 6 1_555 A DG 2 1_555 B DC 5 1_555 -0.422 5.629  3.555 -2.672 -1.257 -12.298 -23.850 -5.538 3.926 5.759  
-12.241 -12.646 1 AA_DC1DG2:DC11DG12_BB A 1 ? B 12 ? A 2 ? B 11 ? 
1 A DG 2 1_555 B DC 5 1_555 A DC 3 1_555 B DG 4 1_555 -0.176 -1.070 3.241 -0.628 -2.719 -50.333 1.446   -0.251 3.181 3.194  -0.738 
-50.405 2 AA_DG2DC3:DG10DC11_BB A 2 ? B 11 ? A 3 ? B 10 ? 
1 A DC 3 1_555 B DG 4 1_555 A DG 4 1_555 B DC 3 1_555 -0.133 5.329  4.029 0.101  -5.434 -2.678  11.885  -0.104 6.563 63.773 1.186 
-6.058  3 AA_DC3DG4:DC9DG10_BB  A 3 ? B 10 ? A 4 ? B 9  ? 
1 A DG 4 1_555 B DC 3 1_555 A DC 5 1_555 B DG 2 1_555 0.045  -0.863 3.204 0.749  -2.362 -52.314 1.129   0.099  3.164 2.678  0.849 
-52.369 4 AA_DG4DC5:DG8DC9_BB   A 4 ? B 9  ? A 5 ? B 8  ? 
1 A DC 5 1_555 B DG 2 1_555 A DG 6 1_555 B DC 1 1_555 0.009  5.320  3.555 2.276  -0.478 -9.639  -29.758 4.936  3.710 2.792  13.290 
-9.914  5 AA_DC5DG6:DC7DG8_BB   A 5 ? B 8  ? A 6 ? B 7  ? 
# 
loop_
_pdbx_entity_nonpoly.entity_id 
_pdbx_entity_nonpoly.name 
_pdbx_entity_nonpoly.comp_id 
2 'ZINC ION'                         ZN  
3 'CHLORIDE ION'                     CL  
4 'SPERMINE (FULLY PROTONATED FORM)' SPK 
5 water                              HOH 
# 
_pdbx_initial_refinement_model.id               1 
_pdbx_initial_refinement_model.entity_id_list   ? 
_pdbx_initial_refinement_model.type             'experimental model' 
_pdbx_initial_refinement_model.source_name      PDB 
_pdbx_initial_refinement_model.accession_code   1I0T 
_pdbx_initial_refinement_model.details          ? 
#