HEADER LYASE 14-OCT-12 4HJW TITLE CRYSTAL STRUCTURE OF METARHIZIUM ANISOPLIAE IDCASE IN APO FORM COMPND MOL_ID: 1; COMPND 2 MOLECULE: URACIL-5-CARBOXYLATE DECARBOXYLASE; COMPND 3 CHAIN: A, B, C; COMPND 4 SYNONYM: IDCASE; COMPND 5 EC: 4.1.1.66; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: METARHIZIUM ANISOPLIAE; SOURCE 3 ORGANISM_TAXID: 5530; SOURCE 4 GENE: MAA_05919; SOURCE 5 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 6 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 7 EXPRESSION_SYSTEM_STRAIN: BL21(DE3) CODON PLUS; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-28SUMO KEYWDS PYRIMIDINE METABOLISM, DNA DECARBOXYLATION, IDCASE, DECARBOXYLASE, KEYWDS 2 URACIL, LYASE EXPDTA X-RAY DIFFRACTION AUTHOR S.XU,J.ZHU,J.DING REVDAT 4 28-FEB-24 4HJW 1 REMARK SEQADV LINK REVDAT 3 15-NOV-17 4HJW 1 REMARK REVDAT 2 20-NOV-13 4HJW 1 JRNL REVDAT 1 11-SEP-13 4HJW 0 JRNL AUTH S.XU,W.LI,J.ZHU,R.WANG,Z.LI,G.L.XU,J.DING JRNL TITL CRYSTAL STRUCTURES OF ISOOROTATE DECARBOXYLASES REVEAL A JRNL TITL 2 NOVEL CATALYTIC MECHANISM OF 5-CARBOXYL-URACIL JRNL TITL 3 DECARBOXYLATION AND SHED LIGHT ON THE SEARCH FOR DNA JRNL TITL 4 DECARBOXYLASE. JRNL REF CELL RES. V. 23 1296 2013 JRNL REFN ISSN 1001-0602 JRNL PMID 23917530 JRNL DOI 10.1038/CR.2013.107 REMARK 2 REMARK 2 RESOLUTION. 2.60 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.60 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 115.17 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.2 REMARK 3 NUMBER OF REFLECTIONS : 53745 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.177 REMARK 3 R VALUE (WORKING SET) : 0.175 REMARK 3 FREE R VALUE : 0.222 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2683 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.60 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.67 REMARK 3 REFLECTION IN BIN (WORKING SET) : 3656 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.00 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 190 REMARK 3 BIN FREE R VALUE : 0.3270 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 8690 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 3 REMARK 3 SOLVENT ATOMS : 283 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 49.53 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.14000 REMARK 3 B22 (A**2) : 0.14000 REMARK 3 B33 (A**2) : -0.22000 REMARK 3 B12 (A**2) : 0.07000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): NULL REMARK 3 ESU BASED ON FREE R VALUE (A): 0.247 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.193 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 20.892 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.958 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.930 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 8912 ; 0.008 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 12132 ; 1.091 ; 1.963 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 1125 ; 5.068 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 382 ;33.916 ;23.403 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1416 ;17.703 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 57 ;15.805 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 1368 ; 0.073 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 6808 ; 0.005 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 8912 ; 2.826 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 120 ;22.529 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 8856 ; 5.799 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: REMARK 3 HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT REMARK 3 U VALUES : REFINED INDIVIDUALLY REMARK 4 REMARK 4 4HJW COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 25-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075557. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 28-MAR-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315R REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO, HKL-2000 REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 53820 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.600 REMARK 200 RESOLUTION RANGE LOW (A) : 115.168 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 98.3 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.10600 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.60 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.69 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.3 REMARK 200 DATA REDUNDANCY IN SHELL : 4.90 REMARK 200 R MERGE FOR SHELL (I) : 0.62300 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHENIX REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 65.91 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.61 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 60% V/V TACSIMATE, 0.1 M BIS-TRIS REMARK 280 PROPANE, PH 7.0, VAPOR DIFFUSION, SITTING DROP, TEMPERATURE 289K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 58.45567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 116.91133 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 116.91133 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 58.45567 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6360 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27470 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -126.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 6390 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 27070 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -127.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: C REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 -132.98400 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 58.45567 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLU A 375 REMARK 465 LYS A 376 REMARK 465 ALA A 377 REMARK 465 GLU B 375 REMARK 465 LYS B 376 REMARK 465 ALA B 377 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PRO A 99 33.99 -96.53 REMARK 500 TRP A 100 -131.30 48.99 REMARK 500 HIS A 197 -47.39 -167.24 REMARK 500 TYR A 301 -0.80 65.44 REMARK 500 TRP B 100 -128.70 59.14 REMARK 500 TYR B 158 -11.02 73.68 REMARK 500 ARG B 160 -5.46 -141.86 REMARK 500 HIS B 197 -47.99 -167.72 REMARK 500 VAL B 242 78.21 -118.33 REMARK 500 VAL B 279 59.78 -98.89 REMARK 500 ALA B 298 30.98 -96.28 REMARK 500 ARG B 372 55.50 33.07 REMARK 500 PRO C 99 33.87 -95.10 REMARK 500 TRP C 100 -128.81 52.67 REMARK 500 LEU C 139 2.97 -67.46 REMARK 500 TYR C 158 -2.69 76.12 REMARK 500 HIS C 197 -41.53 -167.90 REMARK 500 VAL C 279 56.60 -104.70 REMARK 500 TYR C 301 -13.34 75.36 REMARK 500 GLU C 334 -8.23 -59.48 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 12 NE2 REMARK 620 2 HIS A 14 NE2 89.6 REMARK 620 3 HIS A 195 NE2 88.6 88.8 REMARK 620 4 ASP A 323 OD1 88.7 101.7 169.1 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 12 NE2 REMARK 620 2 HIS B 14 NE2 85.6 REMARK 620 3 HIS B 195 NE2 94.2 90.4 REMARK 620 4 ASP B 323 OD1 84.7 92.3 177.0 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN C 401 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS C 12 NE2 REMARK 620 2 HIS C 14 NE2 87.5 REMARK 620 3 HIS C 195 NE2 95.0 95.3 REMARK 620 4 ASP C 323 OD1 80.1 97.6 166.0 REMARK 620 N 1 2 3 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN C 401 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HK5 RELATED DB: PDB REMARK 900 RELATED ID: 4HK6 RELATED DB: PDB REMARK 900 RELATED ID: 4HK7 RELATED DB: PDB DBREF 4HJW A 1 377 UNP E9F0X0 E9F0X0_METAR 1 377 DBREF 4HJW B 1 377 UNP E9F0X0 E9F0X0_METAR 1 377 DBREF 4HJW C 1 377 UNP E9F0X0 E9F0X0_METAR 1 377 SEQADV 4HJW SER A 0 UNP E9F0X0 EXPRESSION TAG SEQADV 4HJW SER B 0 UNP E9F0X0 EXPRESSION TAG SEQADV 4HJW SER C 0 UNP E9F0X0 EXPRESSION TAG SEQRES 1 A 378 SER MET ALA THR SER ASN PRO THR VAL VAL ASP ILE HIS SEQRES 2 A 378 THR HIS MET TYR PRO PRO GLN TYR ILE LYS ILE LEU GLU SEQRES 3 A 378 SER ARG THR THR ILE PRO LEU VAL ARG LYS PHE PRO GLN SEQRES 4 A 378 ALA PRO GLU PRO ARG LEU ILE LEU LEU GLU ALA GLU LEU SEQRES 5 A 378 GLY ASP LEU GLU LYS ALA ILE ASN ASP PRO SER ALA LYS SEQRES 6 A 378 PRO PRO GLY ARG PRO LEU THR SER HIS PHE ALA SER LEU SEQRES 7 A 378 ASP GLN LYS ILE HIS PHE MET ASP THR HIS ARG ILE ASP SEQRES 8 A 378 ILE SER VAL ILE SER LEU ALA ASN PRO TRP LEU ASP PHE SEQRES 9 A 378 VAL HIS ALA SER HIS ALA GLY ASP ILE ALA GLU SER VAL SEQRES 10 A 378 ASN ASP GLU PHE SER ASP MET CYS GLY LYS HIS HIS GLY SEQRES 11 A 378 ARG LEU PHE PHE PHE GLY THR LEU PRO LEU THR ALA PRO SEQRES 12 A 378 LEU GLU THR LEU LEU ALA SER ILE SER HIS LEU ALA ALA SEQRES 13 A 378 LEU LYS TYR CYS ARG GLY VAL ILE LEU GLY THR SER GLY SEQRES 14 A 378 LEU GLY LYS GLY LEU ASP ASP PRO HIS LEU ILE PRO ILE SEQRES 15 A 378 PHE GLU ALA LEU ALA ALA ALA ASN LEU THR ILE PHE LEU SEQRES 16 A 378 HIS PRO HIS TYR GLY LEU PRO ASN ASP VAL TRP GLY PRO SEQRES 17 A 378 ARG ALA GLY GLU TYR GLY HIS VAL LEU PRO LEU ALA LEU SEQRES 18 A 378 GLY PHE PRO MET GLU THR THR ILE ALA VAL ALA ARG MET SEQRES 19 A 378 TYR LEU ALA GLY VAL PHE ASP GLN VAL ARG ASP LEU ARG SEQRES 20 A 378 MET VAL LEU ALA HIS SER GLY GLY THR LEU PRO PHE LEU SEQRES 21 A 378 ALA GLY ARG ILE GLU SER CYS ILE PHE HIS ASP GLY GLN SEQRES 22 A 378 LEU VAL ARG GLN GLY LYS VAL GLY GLU ASN ARG ARG THR SEQRES 23 A 378 VAL TRP ASP VAL LEU LYS GLU GLN VAL TYR LEU ASP ALA SEQRES 24 A 378 VAL ILE TYR SER GLU VAL GLY LEU LYS ALA ALA ILE ASP SEQRES 25 A 378 ALA SER GLY SER ASP ARG LEU MET PHE GLY THR ASP HIS SEQRES 26 A 378 PRO PHE PHE PRO PRO ILE THR THR ASP GLU GLN GLY GLN SEQRES 27 A 378 TRP GLU SER VAL SER LEU ASN ALA GLN ALA VAL ALA GLU SEQRES 28 A 378 ALA VAL GLY GLU GLY SER ALA GLU ALA ARG ALA ILE MET SEQRES 29 A 378 GLY SER ASN ALA ILE ARG VAL LEU ARG LEU GLU GLU LYS SEQRES 30 A 378 ALA SEQRES 1 B 378 SER MET ALA THR SER ASN PRO THR VAL VAL ASP ILE HIS SEQRES 2 B 378 THR HIS MET TYR PRO PRO GLN TYR ILE LYS ILE LEU GLU SEQRES 3 B 378 SER ARG THR THR ILE PRO LEU VAL ARG LYS PHE PRO GLN SEQRES 4 B 378 ALA PRO GLU PRO ARG LEU ILE LEU LEU GLU ALA GLU LEU SEQRES 5 B 378 GLY ASP LEU GLU LYS ALA ILE ASN ASP PRO SER ALA LYS SEQRES 6 B 378 PRO PRO GLY ARG PRO LEU THR SER HIS PHE ALA SER LEU SEQRES 7 B 378 ASP GLN LYS ILE HIS PHE MET ASP THR HIS ARG ILE ASP SEQRES 8 B 378 ILE SER VAL ILE SER LEU ALA ASN PRO TRP LEU ASP PHE SEQRES 9 B 378 VAL HIS ALA SER HIS ALA GLY ASP ILE ALA GLU SER VAL SEQRES 10 B 378 ASN ASP GLU PHE SER ASP MET CYS GLY LYS HIS HIS GLY SEQRES 11 B 378 ARG LEU PHE PHE PHE GLY THR LEU PRO LEU THR ALA PRO SEQRES 12 B 378 LEU GLU THR LEU LEU ALA SER ILE SER HIS LEU ALA ALA SEQRES 13 B 378 LEU LYS TYR CYS ARG GLY VAL ILE LEU GLY THR SER GLY SEQRES 14 B 378 LEU GLY LYS GLY LEU ASP ASP PRO HIS LEU ILE PRO ILE SEQRES 15 B 378 PHE GLU ALA LEU ALA ALA ALA ASN LEU THR ILE PHE LEU SEQRES 16 B 378 HIS PRO HIS TYR GLY LEU PRO ASN ASP VAL TRP GLY PRO SEQRES 17 B 378 ARG ALA GLY GLU TYR GLY HIS VAL LEU PRO LEU ALA LEU SEQRES 18 B 378 GLY PHE PRO MET GLU THR THR ILE ALA VAL ALA ARG MET SEQRES 19 B 378 TYR LEU ALA GLY VAL PHE ASP GLN VAL ARG ASP LEU ARG SEQRES 20 B 378 MET VAL LEU ALA HIS SER GLY GLY THR LEU PRO PHE LEU SEQRES 21 B 378 ALA GLY ARG ILE GLU SER CYS ILE PHE HIS ASP GLY GLN SEQRES 22 B 378 LEU VAL ARG GLN GLY LYS VAL GLY GLU ASN ARG ARG THR SEQRES 23 B 378 VAL TRP ASP VAL LEU LYS GLU GLN VAL TYR LEU ASP ALA SEQRES 24 B 378 VAL ILE TYR SER GLU VAL GLY LEU LYS ALA ALA ILE ASP SEQRES 25 B 378 ALA SER GLY SER ASP ARG LEU MET PHE GLY THR ASP HIS SEQRES 26 B 378 PRO PHE PHE PRO PRO ILE THR THR ASP GLU GLN GLY GLN SEQRES 27 B 378 TRP GLU SER VAL SER LEU ASN ALA GLN ALA VAL ALA GLU SEQRES 28 B 378 ALA VAL GLY GLU GLY SER ALA GLU ALA ARG ALA ILE MET SEQRES 29 B 378 GLY SER ASN ALA ILE ARG VAL LEU ARG LEU GLU GLU LYS SEQRES 30 B 378 ALA SEQRES 1 C 378 SER MET ALA THR SER ASN PRO THR VAL VAL ASP ILE HIS SEQRES 2 C 378 THR HIS MET TYR PRO PRO GLN TYR ILE LYS ILE LEU GLU SEQRES 3 C 378 SER ARG THR THR ILE PRO LEU VAL ARG LYS PHE PRO GLN SEQRES 4 C 378 ALA PRO GLU PRO ARG LEU ILE LEU LEU GLU ALA GLU LEU SEQRES 5 C 378 GLY ASP LEU GLU LYS ALA ILE ASN ASP PRO SER ALA LYS SEQRES 6 C 378 PRO PRO GLY ARG PRO LEU THR SER HIS PHE ALA SER LEU SEQRES 7 C 378 ASP GLN LYS ILE HIS PHE MET ASP THR HIS ARG ILE ASP SEQRES 8 C 378 ILE SER VAL ILE SER LEU ALA ASN PRO TRP LEU ASP PHE SEQRES 9 C 378 VAL HIS ALA SER HIS ALA GLY ASP ILE ALA GLU SER VAL SEQRES 10 C 378 ASN ASP GLU PHE SER ASP MET CYS GLY LYS HIS HIS GLY SEQRES 11 C 378 ARG LEU PHE PHE PHE GLY THR LEU PRO LEU THR ALA PRO SEQRES 12 C 378 LEU GLU THR LEU LEU ALA SER ILE SER HIS LEU ALA ALA SEQRES 13 C 378 LEU LYS TYR CYS ARG GLY VAL ILE LEU GLY THR SER GLY SEQRES 14 C 378 LEU GLY LYS GLY LEU ASP ASP PRO HIS LEU ILE PRO ILE SEQRES 15 C 378 PHE GLU ALA LEU ALA ALA ALA ASN LEU THR ILE PHE LEU SEQRES 16 C 378 HIS PRO HIS TYR GLY LEU PRO ASN ASP VAL TRP GLY PRO SEQRES 17 C 378 ARG ALA GLY GLU TYR GLY HIS VAL LEU PRO LEU ALA LEU SEQRES 18 C 378 GLY PHE PRO MET GLU THR THR ILE ALA VAL ALA ARG MET SEQRES 19 C 378 TYR LEU ALA GLY VAL PHE ASP GLN VAL ARG ASP LEU ARG SEQRES 20 C 378 MET VAL LEU ALA HIS SER GLY GLY THR LEU PRO PHE LEU SEQRES 21 C 378 ALA GLY ARG ILE GLU SER CYS ILE PHE HIS ASP GLY GLN SEQRES 22 C 378 LEU VAL ARG GLN GLY LYS VAL GLY GLU ASN ARG ARG THR SEQRES 23 C 378 VAL TRP ASP VAL LEU LYS GLU GLN VAL TYR LEU ASP ALA SEQRES 24 C 378 VAL ILE TYR SER GLU VAL GLY LEU LYS ALA ALA ILE ASP SEQRES 25 C 378 ALA SER GLY SER ASP ARG LEU MET PHE GLY THR ASP HIS SEQRES 26 C 378 PRO PHE PHE PRO PRO ILE THR THR ASP GLU GLN GLY GLN SEQRES 27 C 378 TRP GLU SER VAL SER LEU ASN ALA GLN ALA VAL ALA GLU SEQRES 28 C 378 ALA VAL GLY GLU GLY SER ALA GLU ALA ARG ALA ILE MET SEQRES 29 C 378 GLY SER ASN ALA ILE ARG VAL LEU ARG LEU GLU GLU LYS SEQRES 30 C 378 ALA HET ZN A 401 1 HET ZN B 401 1 HET ZN C 401 1 HETNAM ZN ZINC ION FORMUL 4 ZN 3(ZN 2+) FORMUL 7 HOH *283(H2 O) HELIX 1 1 SER A 0 ASN A 5 1 6 HELIX 2 2 PRO A 17 SER A 26 1 10 HELIX 3 3 LEU A 47 ALA A 49 5 3 HELIX 4 4 GLU A 50 ASP A 60 1 11 HELIX 5 5 THR A 71 SER A 76 1 6 HELIX 6 6 SER A 76 HIS A 87 1 12 HELIX 7 7 HIS A 105 HIS A 127 1 23 HELIX 8 8 PRO A 142 LEU A 156 1 15 HELIX 9 9 ASP A 175 HIS A 177 5 3 HELIX 10 10 LEU A 178 ASN A 189 1 12 HELIX 11 11 PRO A 201 GLY A 206 5 6 HELIX 12 12 ARG A 208 GLY A 213 5 6 HELIX 13 13 HIS A 214 LEU A 220 1 7 HELIX 14 14 LEU A 220 ALA A 236 1 17 HELIX 15 15 GLY A 237 VAL A 242 1 6 HELIX 16 16 HIS A 251 GLY A 254 5 4 HELIX 17 17 THR A 255 HIS A 269 1 15 HELIX 18 18 ASP A 270 GLN A 276 1 7 HELIX 19 19 THR A 285 GLN A 293 1 9 HELIX 20 20 SER A 302 GLY A 314 1 13 HELIX 21 21 TRP A 338 GLY A 353 1 16 HELIX 22 22 SER A 356 MET A 363 1 8 HELIX 23 23 GLY A 364 LEU A 371 1 8 HELIX 24 24 PRO B 17 SER B 26 1 10 HELIX 25 25 LEU B 47 ALA B 49 5 3 HELIX 26 26 GLU B 50 ILE B 58 1 9 HELIX 27 27 THR B 71 SER B 76 1 6 HELIX 28 28 SER B 76 HIS B 87 1 12 HELIX 29 29 HIS B 105 HIS B 127 1 23 HELIX 30 30 PRO B 142 LEU B 156 1 15 HELIX 31 31 ASP B 175 HIS B 177 5 3 HELIX 32 32 LEU B 178 ALA B 188 1 11 HELIX 33 33 PRO B 201 GLY B 213 5 13 HELIX 34 34 HIS B 214 LEU B 220 1 7 HELIX 35 35 LEU B 220 ALA B 236 1 17 HELIX 36 36 GLY B 237 VAL B 242 1 6 HELIX 37 37 HIS B 251 GLY B 254 5 4 HELIX 38 38 THR B 255 HIS B 269 1 15 HELIX 39 39 ASP B 270 GLN B 276 1 7 HELIX 40 40 THR B 285 GLN B 293 1 9 HELIX 41 41 SER B 302 GLY B 314 1 13 HELIX 42 42 TRP B 338 GLY B 353 1 16 HELIX 43 43 SER B 356 GLY B 364 1 9 HELIX 44 44 GLY B 364 LEU B 371 1 8 HELIX 45 45 PRO C 17 SER C 26 1 10 HELIX 46 46 LEU C 47 ALA C 49 5 3 HELIX 47 47 GLU C 50 ASP C 60 1 11 HELIX 48 48 THR C 71 SER C 76 1 6 HELIX 49 49 SER C 76 HIS C 87 1 12 HELIX 50 50 HIS C 105 HIS C 127 1 23 HELIX 51 51 PRO C 142 LEU C 156 1 15 HELIX 52 52 ASP C 175 HIS C 177 5 3 HELIX 53 53 LEU C 178 ALA C 188 1 11 HELIX 54 54 PRO C 201 GLY C 206 5 6 HELIX 55 55 ARG C 208 GLY C 213 5 6 HELIX 56 56 HIS C 214 LEU C 220 1 7 HELIX 57 57 LEU C 220 ALA C 236 1 17 HELIX 58 58 GLY C 237 VAL C 242 1 6 HELIX 59 59 HIS C 251 GLY C 254 5 4 HELIX 60 60 THR C 255 HIS C 269 1 15 HELIX 61 61 ASP C 270 GLN C 276 1 7 HELIX 62 62 THR C 285 GLN C 293 1 9 HELIX 63 63 SER C 302 GLY C 314 1 13 HELIX 64 64 TRP C 338 GLY C 353 1 16 HELIX 65 65 SER C 356 GLY C 364 1 9 HELIX 66 66 GLY C 364 LEU C 371 1 8 SHEET 1 A 8 VAL A 9 MET A 15 0 SHEET 2 A 8 ILE A 91 LEU A 96 1 O VAL A 93 N ASP A 10 SHEET 3 A 8 LEU A 131 THR A 136 1 O PHE A 132 N ILE A 94 SHEET 4 A 8 CYS A 159 LEU A 164 1 O GLY A 161 N GLY A 135 SHEET 5 A 8 THR A 191 LEU A 194 1 O PHE A 193 N VAL A 162 SHEET 6 A 8 MET A 247 LEU A 249 1 O VAL A 248 N ILE A 192 SHEET 7 A 8 VAL A 294 ASP A 297 1 O TYR A 295 N MET A 247 SHEET 8 A 8 LEU A 318 MET A 319 1 O MET A 319 N LEU A 296 SHEET 1 B 3 LEU A 32 ARG A 34 0 SHEET 2 B 3 ARG A 43 ILE A 45 -1 O ILE A 45 N LEU A 32 SHEET 3 B 3 ARG A 68 PRO A 69 -1 O ARG A 68 N LEU A 44 SHEET 1 C 8 VAL B 9 MET B 15 0 SHEET 2 C 8 ILE B 91 LEU B 96 1 O ILE B 91 N ASP B 10 SHEET 3 C 8 LEU B 131 THR B 136 1 O PHE B 132 N ILE B 94 SHEET 4 C 8 CYS B 159 LEU B 164 1 O GLY B 161 N GLY B 135 SHEET 5 C 8 THR B 191 LEU B 194 1 O PHE B 193 N VAL B 162 SHEET 6 C 8 MET B 247 LEU B 249 1 O VAL B 248 N ILE B 192 SHEET 7 C 8 VAL B 294 ASP B 297 1 O TYR B 295 N MET B 247 SHEET 8 C 8 LEU B 318 MET B 319 1 O MET B 319 N LEU B 296 SHEET 1 D 3 LEU B 32 ARG B 34 0 SHEET 2 D 3 ARG B 43 ILE B 45 -1 O ILE B 45 N LEU B 32 SHEET 3 D 3 ARG B 68 PRO B 69 -1 O ARG B 68 N LEU B 44 SHEET 1 E 8 VAL C 9 MET C 15 0 SHEET 2 E 8 ILE C 91 LEU C 96 1 O VAL C 93 N ASP C 10 SHEET 3 E 8 LEU C 131 GLY C 135 1 O PHE C 132 N ILE C 94 SHEET 4 E 8 CYS C 159 LEU C 164 1 O GLY C 161 N GLY C 135 SHEET 5 E 8 THR C 191 LEU C 194 1 O PHE C 193 N VAL C 162 SHEET 6 E 8 MET C 247 LEU C 249 1 O VAL C 248 N ILE C 192 SHEET 7 E 8 VAL C 294 ASP C 297 1 O TYR C 295 N MET C 247 SHEET 8 E 8 LEU C 318 MET C 319 1 O MET C 319 N LEU C 296 SHEET 1 F 3 LEU C 32 LYS C 35 0 SHEET 2 F 3 PRO C 42 ILE C 45 -1 O ARG C 43 N ARG C 34 SHEET 3 F 3 ARG C 68 PRO C 69 -1 O ARG C 68 N LEU C 44 LINK NE2 HIS A 12 ZN ZN A 401 1555 1555 2.51 LINK NE2 HIS A 14 ZN ZN A 401 1555 1555 2.35 LINK NE2 HIS A 195 ZN ZN A 401 1555 1555 2.29 LINK OD1 ASP A 323 ZN ZN A 401 1555 1555 2.46 LINK NE2 HIS B 12 ZN ZN B 401 1555 1555 2.45 LINK NE2 HIS B 14 ZN ZN B 401 1555 1555 2.30 LINK NE2 HIS B 195 ZN ZN B 401 1555 1555 2.37 LINK OD1 ASP B 323 ZN ZN B 401 1555 1555 2.47 LINK NE2 HIS C 12 ZN ZN C 401 1555 1555 2.35 LINK NE2 HIS C 14 ZN ZN C 401 1555 1555 2.35 LINK NE2 HIS C 195 ZN ZN C 401 1555 1555 2.31 LINK OD1 ASP C 323 ZN ZN C 401 1555 1555 2.21 CISPEP 1 ILE A 30 PRO A 31 0 -3.63 CISPEP 2 ASN A 98 PRO A 99 0 1.28 CISPEP 3 HIS A 324 PRO A 325 0 4.23 CISPEP 4 ILE B 30 PRO B 31 0 -0.86 CISPEP 5 ASN B 98 PRO B 99 0 3.07 CISPEP 6 HIS B 324 PRO B 325 0 0.92 CISPEP 7 ILE C 30 PRO C 31 0 -3.24 CISPEP 8 ASN C 98 PRO C 99 0 -1.62 CISPEP 9 HIS C 324 PRO C 325 0 1.54 SITE 1 AC1 6 HIS A 12 HIS A 14 HIS A 195 ASP A 323 SITE 2 AC1 6 HOH A 538 HOH A 557 SITE 1 AC2 5 HIS B 12 HIS B 14 HIS B 195 ASP B 323 SITE 2 AC2 5 HOH B 562 SITE 1 AC3 6 HIS C 12 HIS C 14 HIS C 195 ASP C 323 SITE 2 AC3 6 HOH C 579 HOH C 580 CRYST1 132.984 132.984 175.367 90.00 90.00 120.00 P 31 1 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.007520 0.004342 0.000000 0.00000 SCALE2 0.000000 0.008683 0.000000 0.00000 SCALE3 0.000000 0.000000 0.005702 0.00000