HEADER MEMBRANE PROTEIN 17-OCT-12 4HLS TITLE CRYSTAL STRUCTURE OF MUTANT RABBIT PRP 121-230 (S170N) COMPND MOL_ID: 1; COMPND 2 MOLECULE: MAJOR PRION PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 119-229; COMPND 5 SYNONYM: PRP, PRP27-30, PRP33-35C; COMPND 6 ENGINEERED: YES; COMPND 7 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: EUROPEAN RABBIT,JAPANESE WHITE RABBIT,DOMESTIC SOURCE 4 RABBIT,RABBITS; SOURCE 5 ORGANISM_TAXID: 9986; SOURCE 6 GENE: PRNP, PRP; SOURCE 7 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 8 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 9 EXPRESSION_SYSTEM_STRAIN: BL21 (AI); SOURCE 10 EXPRESSION_SYSTEM_VECTOR_TYPE: PET2A KEYWDS PRP, PRION, MEMBRANE, MEMBRANE PROTEIN EXPDTA X-RAY DIFFRACTION AUTHOR B.SWEETING,A.CHAKRABARTTY,E.F.PAI REVDAT 3 20-SEP-23 4HLS 1 REMARK SEQADV LINK REVDAT 2 22-MAY-13 4HLS 1 JRNL REVDAT 1 15-MAY-13 4HLS 0 JRNL AUTH B.SWEETING,E.BROWN,M.Q.KHAN,A.CHAKRABARTTY,E.F.PAI JRNL TITL N-TERMINAL HELIX-CAP IN ALPHA-HELIX 2 MODULATES BETA-STATE JRNL TITL 2 MISFOLDING IN RABBIT AND HAMSTER PRION PROTEINS. JRNL REF PLOS ONE V. 8 63047 2013 JRNL REFN ESSN 1932-6203 JRNL PMID 23675452 JRNL DOI 10.1371/JOURNAL.PONE.0063047 REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.51 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 97.9 REMARK 3 NUMBER OF REFLECTIONS : 37203 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.147 REMARK 3 R VALUE (WORKING SET) : 0.146 REMARK 3 FREE R VALUE : 0.180 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1971 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.45 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.49 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2069 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 74.36 REMARK 3 BIN R VALUE (WORKING SET) : 0.2120 REMARK 3 BIN FREE R VALUE SET COUNT : 100 REMARK 3 BIN FREE R VALUE : 0.2400 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 1686 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 26 REMARK 3 SOLVENT ATOMS : 181 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 18.16 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.16000 REMARK 3 B22 (A**2) : -0.56000 REMARK 3 B33 (A**2) : 0.72000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.068 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.062 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.033 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 1.889 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.972 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.954 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 1813 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 1630 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 2463 ; 1.731 ; 1.930 REMARK 3 BOND ANGLES OTHERS (DEGREES): 3737 ; 1.524 ; 3.002 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 220 ; 6.674 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 109 ;36.086 ;24.220 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 313 ;15.150 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 15 ;11.498 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 255 ; 0.103 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2129 ; 0.021 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 474 ; 0.018 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): 3443 ; 9.044 ; 3.000 REMARK 3 SPHERICITY; FREE ATOMS (A**2): 79 ;18.864 ; 5.000 REMARK 3 SPHERICITY; BONDED ATOMS (A**2): 3507 ;11.042 ; 5.000 REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4HLS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075625. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-JUL-08 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : DCM WITH CRYO-COOLED 1ST REMARK 200 CRYSTAL, SAGITTALLY BENT 2ND REMARK 200 CRYSTAL, FOLLOWED BY VERTICALLY REMARK 200 FOCUSING MIRROR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39174 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 60.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 97.3 REMARK 200 DATA REDUNDANCY : 7.700 REMARK 200 R MERGE (I) : 0.05900 REMARK 200 R SYM (I) : 0.05100 REMARK 200 FOR THE DATA SET : 24.2900 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 73.2 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.53800 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 3.600 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: PDB ENTRY 3O79 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 32.01 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 1.81 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100MM SODIUM CACODYLATE PH 6.5, 3.0M REMARK 280 NACL, 30% GLYCEROL, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 14.76000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 43.47500 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 43.04000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 43.47500 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 14.76000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 43.04000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2, 3 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 3 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 3330 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 11410 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -70.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 99 REMARK 465 GLY A 100 REMARK 465 SER A 101 REMARK 465 SER A 102 REMARK 465 HIS A 103 REMARK 465 HIS A 104 REMARK 465 HIS A 105 REMARK 465 HIS A 106 REMARK 465 HIS A 107 REMARK 465 HIS A 108 REMARK 465 SER A 109 REMARK 465 SER A 110 REMARK 465 GLY A 111 REMARK 465 LEU A 112 REMARK 465 VAL A 113 REMARK 465 PRO A 114 REMARK 465 ARG A 115 REMARK 465 GLY A 116 REMARK 465 SER A 117 REMARK 465 HIS A 118 REMARK 465 MET A 119 REMARK 465 ALA A 120 REMARK 465 VAL A 121 REMARK 465 VAL A 122 REMARK 465 GLY A 123 REMARK 465 GLY A 124 REMARK 465 LEU A 125 REMARK 465 GLN A 223 REMARK 465 ALA A 224 REMARK 465 ALA A 225 REMARK 465 TYR A 226 REMARK 465 GLN A 227 REMARK 465 ARG A 228 REMARK 465 ALA A 229 REMARK 465 ALA A 230 REMARK 465 MET B 99 REMARK 465 GLY B 100 REMARK 465 SER B 101 REMARK 465 SER B 102 REMARK 465 HIS B 103 REMARK 465 HIS B 104 REMARK 465 HIS B 105 REMARK 465 HIS B 106 REMARK 465 HIS B 107 REMARK 465 HIS B 108 REMARK 465 SER B 109 REMARK 465 SER B 110 REMARK 465 GLY B 111 REMARK 465 LEU B 112 REMARK 465 VAL B 113 REMARK 465 PRO B 114 REMARK 465 ARG B 115 REMARK 465 GLY B 116 REMARK 465 SER B 117 REMARK 465 HIS B 118 REMARK 465 MET B 119 REMARK 465 ALA B 120 REMARK 465 VAL B 121 REMARK 465 VAL B 122 REMARK 465 GLY B 123 REMARK 465 GLY B 124 REMARK 465 LEU B 125 REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLY A 142 O REMARK 620 2 ASP A 144 OD1 90.2 REMARK 620 3 HOH A 418 O 80.9 96.0 REMARK 620 4 HOH A 420 O 79.3 168.7 86.4 REMARK 620 N 1 2 3 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 192 OG1 REMARK 620 2 GLU A 196 O 107.9 REMARK 620 3 ASN A 197 OD1 152.2 80.1 REMARK 620 4 THR B 192 OG1 122.1 97.9 81.6 REMARK 620 5 GLU B 196 O 98.9 124.8 57.0 107.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 303 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 SER B 132 O REMARK 620 2 GLN B 217 OE1 104.3 REMARK 620 N 1 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 302 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 GLU B 152 O REMARK 620 2 HOH B 412 O 95.8 REMARK 620 3 HOH B 495 O 94.2 87.3 REMARK 620 N 1 2 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 304 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ARG B 228 O REMARK 620 2 HOH B 409 O 85.1 REMARK 620 3 HOH B 431 O 165.6 87.8 REMARK 620 4 HOH B 446 O 91.2 175.7 95.3 REMARK 620 5 HOH B 448 O 94.8 91.1 97.9 91.4 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA B 305 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ALA B 230 OXT REMARK 620 2 GOL B 308 O2 111.2 REMARK 620 N 1 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE CL B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NA B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 308 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HMM RELATED DB: PDB REMARK 900 RELATED ID: 4HMR RELATED DB: PDB DBREF 4HLS A 120 230 UNP Q95211 PRIO_RABIT 119 229 DBREF 4HLS B 120 230 UNP Q95211 PRIO_RABIT 119 229 SEQADV 4HLS MET A 99 UNP Q95211 EXPRESSION TAG SEQADV 4HLS GLY A 100 UNP Q95211 EXPRESSION TAG SEQADV 4HLS SER A 101 UNP Q95211 EXPRESSION TAG SEQADV 4HLS SER A 102 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS A 103 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS A 104 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS A 105 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS A 106 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS A 107 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS A 108 UNP Q95211 EXPRESSION TAG SEQADV 4HLS SER A 109 UNP Q95211 EXPRESSION TAG SEQADV 4HLS SER A 110 UNP Q95211 EXPRESSION TAG SEQADV 4HLS GLY A 111 UNP Q95211 EXPRESSION TAG SEQADV 4HLS LEU A 112 UNP Q95211 EXPRESSION TAG SEQADV 4HLS VAL A 113 UNP Q95211 EXPRESSION TAG SEQADV 4HLS PRO A 114 UNP Q95211 EXPRESSION TAG SEQADV 4HLS ARG A 115 UNP Q95211 EXPRESSION TAG SEQADV 4HLS GLY A 116 UNP Q95211 EXPRESSION TAG SEQADV 4HLS SER A 117 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS A 118 UNP Q95211 EXPRESSION TAG SEQADV 4HLS MET A 119 UNP Q95211 EXPRESSION TAG SEQADV 4HLS ASN A 170 UNP Q95211 SER 169 ENGINEERED MUTATION SEQADV 4HLS MET B 99 UNP Q95211 EXPRESSION TAG SEQADV 4HLS GLY B 100 UNP Q95211 EXPRESSION TAG SEQADV 4HLS SER B 101 UNP Q95211 EXPRESSION TAG SEQADV 4HLS SER B 102 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS B 103 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS B 104 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS B 105 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS B 106 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS B 107 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS B 108 UNP Q95211 EXPRESSION TAG SEQADV 4HLS SER B 109 UNP Q95211 EXPRESSION TAG SEQADV 4HLS SER B 110 UNP Q95211 EXPRESSION TAG SEQADV 4HLS GLY B 111 UNP Q95211 EXPRESSION TAG SEQADV 4HLS LEU B 112 UNP Q95211 EXPRESSION TAG SEQADV 4HLS VAL B 113 UNP Q95211 EXPRESSION TAG SEQADV 4HLS PRO B 114 UNP Q95211 EXPRESSION TAG SEQADV 4HLS ARG B 115 UNP Q95211 EXPRESSION TAG SEQADV 4HLS GLY B 116 UNP Q95211 EXPRESSION TAG SEQADV 4HLS SER B 117 UNP Q95211 EXPRESSION TAG SEQADV 4HLS HIS B 118 UNP Q95211 EXPRESSION TAG SEQADV 4HLS MET B 119 UNP Q95211 EXPRESSION TAG SEQADV 4HLS ASN B 170 UNP Q95211 SER 169 ENGINEERED MUTATION SEQRES 1 A 132 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 A 132 LEU VAL PRO ARG GLY SER HIS MET ALA VAL VAL GLY GLY SEQRES 3 A 132 LEU GLY GLY TYR MET LEU GLY SER ALA MET SER ARG PRO SEQRES 4 A 132 LEU ILE HIS PHE GLY ASN ASP TYR GLU ASP ARG TYR TYR SEQRES 5 A 132 ARG GLU ASN MET TYR ARG TYR PRO ASN GLN VAL TYR TYR SEQRES 6 A 132 ARG PRO VAL ASP GLN TYR ASN ASN GLN ASN SER PHE VAL SEQRES 7 A 132 HIS ASP CYS VAL ASN ILE THR VAL LYS GLN HIS THR VAL SEQRES 8 A 132 THR THR THR THR LYS GLY GLU ASN PHE THR GLU THR ASP SEQRES 9 A 132 ILE LYS ILE MET GLU ARG VAL VAL GLU GLN MET CYS ILE SEQRES 10 A 132 THR GLN TYR GLN GLN GLU SER GLN ALA ALA TYR GLN ARG SEQRES 11 A 132 ALA ALA SEQRES 1 B 132 MET GLY SER SER HIS HIS HIS HIS HIS HIS SER SER GLY SEQRES 2 B 132 LEU VAL PRO ARG GLY SER HIS MET ALA VAL VAL GLY GLY SEQRES 3 B 132 LEU GLY GLY TYR MET LEU GLY SER ALA MET SER ARG PRO SEQRES 4 B 132 LEU ILE HIS PHE GLY ASN ASP TYR GLU ASP ARG TYR TYR SEQRES 5 B 132 ARG GLU ASN MET TYR ARG TYR PRO ASN GLN VAL TYR TYR SEQRES 6 B 132 ARG PRO VAL ASP GLN TYR ASN ASN GLN ASN SER PHE VAL SEQRES 7 B 132 HIS ASP CYS VAL ASN ILE THR VAL LYS GLN HIS THR VAL SEQRES 8 B 132 THR THR THR THR LYS GLY GLU ASN PHE THR GLU THR ASP SEQRES 9 B 132 ILE LYS ILE MET GLU ARG VAL VAL GLU GLN MET CYS ILE SEQRES 10 B 132 THR GLN TYR GLN GLN GLU SER GLN ALA ALA TYR GLN ARG SEQRES 11 B 132 ALA ALA HET CL A 301 1 HET NA A 302 1 HET NA A 303 1 HET CL B 301 1 HET NA B 302 1 HET NA B 303 1 HET NA B 304 1 HET NA B 305 1 HET GOL B 306 6 HET GOL B 307 6 HET GOL B 308 6 HETNAM CL CHLORIDE ION HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 CL 2(CL 1-) FORMUL 4 NA 6(NA 1+) FORMUL 11 GOL 3(C3 H8 O3) FORMUL 14 HOH *181(H2 O) HELIX 1 1 ASN A 143 MET A 154 1 12 HELIX 2 2 TYR A 155 TYR A 157 5 3 HELIX 3 3 PRO A 165 TYR A 169 5 5 HELIX 4 4 ASN A 171 THR A 193 1 23 HELIX 5 5 THR A 199 SER A 222 1 24 HELIX 6 6 ASN B 143 MET B 154 1 12 HELIX 7 7 TYR B 155 TYR B 157 5 3 HELIX 8 8 PRO B 165 TYR B 169 5 5 HELIX 9 9 ASN B 171 LYS B 194 1 24 HELIX 10 10 THR B 199 ALA B 230 1 32 SHEET 1 A 2 MET A 129 LEU A 130 0 SHEET 2 A 2 TYR A 162 TYR A 163 -1 O TYR A 163 N MET A 129 SHEET 1 B 2 MET B 129 LEU B 130 0 SHEET 2 B 2 TYR B 162 TYR B 163 -1 O TYR B 163 N MET B 129 SSBOND 1 CYS A 179 CYS A 214 1555 1555 2.07 SSBOND 2 CYS B 179 CYS B 214 1555 1555 2.08 LINK O GLY A 142 NA NA A 302 1555 1555 2.29 LINK OD1 ASP A 144 NA NA A 302 1555 1555 2.43 LINK OG1 THR A 192 NA NA A 303 1555 1555 2.72 LINK O GLU A 196 NA NA A 303 1555 1555 2.77 LINK OD1 ASN A 197 NA NA A 303 1555 1555 3.17 LINK NA NA A 302 O HOH A 418 1555 1555 2.43 LINK NA NA A 302 O HOH A 420 1555 1555 2.38 LINK NA NA A 303 OG1 THR B 192 1555 1555 2.72 LINK NA NA A 303 O GLU B 196 1555 1555 2.75 LINK O SER B 132 NA NA B 303 1555 1555 2.84 LINK O GLU B 152 NA NA B 302 1555 1555 2.42 LINK OE1 GLN B 217 NA NA B 303 1555 1555 3.02 LINK O ARG B 228 NA NA B 304 1555 1555 2.29 LINK OXT ALA B 230 NA NA B 305 1555 1555 2.64 LINK NA NA B 302 O HOH B 412 1555 1555 2.46 LINK NA NA B 302 O HOH B 495 1555 1555 2.25 LINK NA NA B 304 O HOH B 409 1555 1555 2.44 LINK NA NA B 304 O HOH B 431 1555 1555 2.35 LINK NA NA B 304 O HOH B 446 1555 1555 2.44 LINK NA NA B 304 O HOH B 448 1555 1555 2.41 LINK NA NA B 305 O2 GOL B 308 1555 1555 2.72 CISPEP 1 GLY B 126 GLY B 127 0 0.00 SITE 1 AC1 2 ARG A 136 ARG A 148 SITE 1 AC2 6 GLY A 142 ASP A 144 GLU A 152 HOH A 402 SITE 2 AC2 6 HOH A 418 HOH A 420 SITE 1 AC3 6 THR A 192 GLU A 196 ASN A 197 THR B 192 SITE 2 AC3 6 GLU B 196 ASN B 197 SITE 1 AC4 2 ARG B 136 ARG B 148 SITE 1 AC5 6 GLY B 142 ASP B 144 GLU B 152 HOH B 412 SITE 2 AC5 6 HOH B 495 HOH B 497 SITE 1 AC6 6 GLY B 131 SER B 132 MET B 134 GLN B 160 SITE 2 AC6 6 VAL B 161 GLN B 217 SITE 1 AC7 6 HOH A 415 ARG B 228 HOH B 409 HOH B 431 SITE 2 AC7 6 HOH B 446 HOH B 448 SITE 1 AC8 5 TYR A 145 TYR A 149 THR A 201 ALA B 230 SITE 2 AC8 5 GOL B 308 SITE 1 AC9 7 HIS A 177 ASP A 178 ASN A 181 TYR B 128 SITE 2 AC9 7 ARG B 164 ASP B 178 ASN B 181 SITE 1 BC1 5 LEU B 138 ILE B 139 ASP B 147 TYR B 150 SITE 2 BC1 5 ARG B 151 SITE 1 BC2 9 TYR A 145 ARG A 151 HOH A 407 TYR B 226 SITE 2 BC2 9 ALA B 229 ALA B 230 NA B 305 HOH B 465 SITE 3 BC2 9 HOH B 489 CRYST1 29.520 86.080 86.950 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.033875 0.000000 0.000000 0.00000 SCALE2 0.000000 0.011617 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011501 0.00000 MTRIX1 1 1.000000 0.000000 0.000000 0.00000 1 MTRIX2 1 0.000000 1.000000 0.000000 0.00000 1 MTRIX3 1 0.000000 0.000000 1.000000 0.00000 1 MTRIX1 2 -0.999760 0.010517 -0.019202 40.66257 1 MTRIX2 2 -0.010447 -0.999938 -0.003775 0.06694 1 MTRIX3 2 -0.019241 -0.003573 0.999808 0.42022 1