data_4HLY # _entry.id 4HLY # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.388 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4HLY pdb_00004hly 10.2210/pdb4hly/pdb NDB NA2088 ? ? RCSB RCSB075631 ? ? WWPDB D_1000075631 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-03-13 2 'Structure model' 1 1 2014-02-05 3 'Structure model' 1 2 2016-09-07 4 'Structure model' 1 3 2016-09-14 5 'Structure model' 1 4 2024-03-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Derived calculations' 3 3 'Structure model' 'Source and taxonomy' 4 4 'Structure model' 'Derived calculations' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 5 'Structure model' chem_comp_atom 2 5 'Structure model' chem_comp_bond 3 5 'Structure model' database_2 4 5 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 5 'Structure model' '_database_2.pdbx_DOI' 2 5 'Structure model' '_database_2.pdbx_database_accession' 3 5 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4HLY _pdbx_database_status.recvd_initial_deposition_date 2012-10-17 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Hew, K.' 1 'Venkatachalam, R.' 2 # _citation.id primary _citation.title ;The crystal structure of the DNA-binding domain of vIRF-1 from the oncogenic KSHV reveals a conserved fold for DNA binding and reinforces its role as a transcription factor. ; _citation.journal_abbrev 'Nucleic Acids Res.' _citation.journal_volume 41 _citation.page_first 4295 _citation.page_last 4306 _citation.year 2013 _citation.journal_id_ASTM NARHAD _citation.country UK _citation.journal_id_ISSN 0305-1048 _citation.journal_id_CSD 0389 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23435230 _citation.pdbx_database_id_DOI 10.1093/nar/gkt082 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Hew, K.' 1 ? primary 'Dahlroth, S.L.' 2 ? primary 'Venkatachalam, R.' 3 ? primary 'Nasertorabi, F.' 4 ? primary 'Lim, B.T.' 5 ? primary 'Cornvik, T.' 6 ? primary 'Nordlund, P.' 7 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man K9 15309.481 2 ? ? 'DNA binding domain, UNP RESIDUES 88-196' ? 2 polymer syn "5'-D(*GP*CP*GP*TP*CP*GP*AP*GP*AP*CP*GP*C)-3'" 3688.405 2 ? ? ? ? 3 water nat water 18.015 232 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Latent viral interferon regulatory factor, Lytic viral interferon regulatory factor, ORF K9, VIRF-1 protein' # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;MHHHHHHSSGVDLGTENLYFQSMGKASIKDWIVCQVNSGKFPGVEWEDEERTRFRIPVTPLADPCFEWRRDGELGVVYIR ERGNMPVDASFKGTRGRRRMLAALRRTRGLQEIGKGISQDGHHFLVFRVRKP ; ;MHHHHHHSSGVDLGTENLYFQSMGKASIKDWIVCQVNSGKFPGVEWEDEERTRFRIPVTPLADPCFEWRRDGELGVVYIR ERGNMPVDASFKGTRGRRRMLAALRRTRGLQEIGKGISQDGHHFLVFRVRKP ; A,B ? 2 polydeoxyribonucleotide no no '(DG)(DC)(DG)(DT)(DC)(DG)(DA)(DG)(DA)(DC)(DG)(DC)' GCGTCGAGACGC C,D ? # _pdbx_entity_nonpoly.entity_id 3 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 HIS n 1 3 HIS n 1 4 HIS n 1 5 HIS n 1 6 HIS n 1 7 HIS n 1 8 SER n 1 9 SER n 1 10 GLY n 1 11 VAL n 1 12 ASP n 1 13 LEU n 1 14 GLY n 1 15 THR n 1 16 GLU n 1 17 ASN n 1 18 LEU n 1 19 TYR n 1 20 PHE n 1 21 GLN n 1 22 SER n 1 23 MET n 1 24 GLY n 1 25 LYS n 1 26 ALA n 1 27 SER n 1 28 ILE n 1 29 LYS n 1 30 ASP n 1 31 TRP n 1 32 ILE n 1 33 VAL n 1 34 CYS n 1 35 GLN n 1 36 VAL n 1 37 ASN n 1 38 SER n 1 39 GLY n 1 40 LYS n 1 41 PHE n 1 42 PRO n 1 43 GLY n 1 44 VAL n 1 45 GLU n 1 46 TRP n 1 47 GLU n 1 48 ASP n 1 49 GLU n 1 50 GLU n 1 51 ARG n 1 52 THR n 1 53 ARG n 1 54 PHE n 1 55 ARG n 1 56 ILE n 1 57 PRO n 1 58 VAL n 1 59 THR n 1 60 PRO n 1 61 LEU n 1 62 ALA n 1 63 ASP n 1 64 PRO n 1 65 CYS n 1 66 PHE n 1 67 GLU n 1 68 TRP n 1 69 ARG n 1 70 ARG n 1 71 ASP n 1 72 GLY n 1 73 GLU n 1 74 LEU n 1 75 GLY n 1 76 VAL n 1 77 VAL n 1 78 TYR n 1 79 ILE n 1 80 ARG n 1 81 GLU n 1 82 ARG n 1 83 GLY n 1 84 ASN n 1 85 MET n 1 86 PRO n 1 87 VAL n 1 88 ASP n 1 89 ALA n 1 90 SER n 1 91 PHE n 1 92 LYS n 1 93 GLY n 1 94 THR n 1 95 ARG n 1 96 GLY n 1 97 ARG n 1 98 ARG n 1 99 ARG n 1 100 MET n 1 101 LEU n 1 102 ALA n 1 103 ALA n 1 104 LEU n 1 105 ARG n 1 106 ARG n 1 107 THR n 1 108 ARG n 1 109 GLY n 1 110 LEU n 1 111 GLN n 1 112 GLU n 1 113 ILE n 1 114 GLY n 1 115 LYS n 1 116 GLY n 1 117 ILE n 1 118 SER n 1 119 GLN n 1 120 ASP n 1 121 GLY n 1 122 HIS n 1 123 HIS n 1 124 PHE n 1 125 LEU n 1 126 VAL n 1 127 PHE n 1 128 ARG n 1 129 VAL n 1 130 ARG n 1 131 LYS n 1 132 PRO n 2 1 DG n 2 2 DC n 2 3 DG n 2 4 DT n 2 5 DC n 2 6 DG n 2 7 DA n 2 8 DG n 2 9 DA n 2 10 DC n 2 11 DG n 2 12 DC n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name HHV-8 _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'ORF K9, vIRF, vIRF-1' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Human herpesvirus 8' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 37296 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21-DE3-Rosetta _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pNIC28-Bsa4 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _pdbx_entity_src_syn.entity_id 2 _pdbx_entity_src_syn.pdbx_src_id 1 _pdbx_entity_src_syn.pdbx_alt_source_flag sample _pdbx_entity_src_syn.pdbx_beg_seq_num ? _pdbx_entity_src_syn.pdbx_end_seq_num ? _pdbx_entity_src_syn.organism_scientific 'synthetic construct' _pdbx_entity_src_syn.organism_common_name ? _pdbx_entity_src_syn.ncbi_taxonomy_id 32630 _pdbx_entity_src_syn.details ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 -21 ? ? ? A . n A 1 2 HIS 2 -20 ? ? ? A . n A 1 3 HIS 3 -19 ? ? ? A . n A 1 4 HIS 4 -18 ? ? ? A . n A 1 5 HIS 5 -17 ? ? ? A . n A 1 6 HIS 6 -16 ? ? ? A . n A 1 7 HIS 7 -15 ? ? ? A . n A 1 8 SER 8 -14 ? ? ? A . n A 1 9 SER 9 -13 ? ? ? A . n A 1 10 GLY 10 -12 ? ? ? A . n A 1 11 VAL 11 -11 ? ? ? A . n A 1 12 ASP 12 -10 ? ? ? A . n A 1 13 LEU 13 -9 ? ? ? A . n A 1 14 GLY 14 -8 ? ? ? A . n A 1 15 THR 15 -7 ? ? ? A . n A 1 16 GLU 16 -6 ? ? ? A . n A 1 17 ASN 17 -5 ? ? ? A . n A 1 18 LEU 18 -4 ? ? ? A . n A 1 19 TYR 19 -3 ? ? ? A . n A 1 20 PHE 20 -2 ? ? ? A . n A 1 21 GLN 21 -1 ? ? ? A . n A 1 22 SER 22 0 ? ? ? A . n A 1 23 MET 23 1 ? ? ? A . n A 1 24 GLY 24 2 ? ? ? A . n A 1 25 LYS 25 3 3 LYS LYS A . n A 1 26 ALA 26 4 4 ALA ALA A . n A 1 27 SER 27 5 5 SER SER A . n A 1 28 ILE 28 6 6 ILE ILE A . n A 1 29 LYS 29 7 7 LYS LYS A . n A 1 30 ASP 30 8 8 ASP ASP A . n A 1 31 TRP 31 9 9 TRP TRP A . n A 1 32 ILE 32 10 10 ILE ILE A . n A 1 33 VAL 33 11 11 VAL VAL A . n A 1 34 CYS 34 12 12 CYS CYS A . n A 1 35 GLN 35 13 13 GLN GLN A . n A 1 36 VAL 36 14 14 VAL VAL A . n A 1 37 ASN 37 15 15 ASN ASN A . n A 1 38 SER 38 16 16 SER SER A . n A 1 39 GLY 39 17 17 GLY GLY A . n A 1 40 LYS 40 18 18 LYS LYS A . n A 1 41 PHE 41 19 19 PHE PHE A . n A 1 42 PRO 42 20 20 PRO PRO A . n A 1 43 GLY 43 21 21 GLY GLY A . n A 1 44 VAL 44 22 22 VAL VAL A . n A 1 45 GLU 45 23 23 GLU GLU A . n A 1 46 TRP 46 24 24 TRP TRP A . n A 1 47 GLU 47 25 25 GLU GLU A . n A 1 48 ASP 48 26 26 ASP ASP A . n A 1 49 GLU 49 27 27 GLU GLU A . n A 1 50 GLU 50 28 28 GLU GLU A . n A 1 51 ARG 51 29 29 ARG ARG A . n A 1 52 THR 52 30 30 THR THR A . n A 1 53 ARG 53 31 31 ARG ARG A . n A 1 54 PHE 54 32 32 PHE PHE A . n A 1 55 ARG 55 33 33 ARG ARG A . n A 1 56 ILE 56 34 34 ILE ILE A . n A 1 57 PRO 57 35 35 PRO PRO A . n A 1 58 VAL 58 36 36 VAL VAL A . n A 1 59 THR 59 37 37 THR THR A . n A 1 60 PRO 60 38 38 PRO PRO A . n A 1 61 LEU 61 39 39 LEU LEU A . n A 1 62 ALA 62 40 40 ALA ALA A . n A 1 63 ASP 63 41 41 ASP ASP A . n A 1 64 PRO 64 42 42 PRO PRO A . n A 1 65 CYS 65 43 43 CYS CYS A . n A 1 66 PHE 66 44 44 PHE PHE A . n A 1 67 GLU 67 45 45 GLU GLU A . n A 1 68 TRP 68 46 46 TRP TRP A . n A 1 69 ARG 69 47 47 ARG ARG A . n A 1 70 ARG 70 48 48 ARG ARG A . n A 1 71 ASP 71 49 49 ASP ASP A . n A 1 72 GLY 72 50 50 GLY GLY A . n A 1 73 GLU 73 51 51 GLU GLU A . n A 1 74 LEU 74 52 52 LEU LEU A . n A 1 75 GLY 75 53 53 GLY GLY A . n A 1 76 VAL 76 54 54 VAL VAL A . n A 1 77 VAL 77 55 55 VAL VAL A . n A 1 78 TYR 78 56 56 TYR TYR A . n A 1 79 ILE 79 57 57 ILE ILE A . n A 1 80 ARG 80 58 58 ARG ARG A . n A 1 81 GLU 81 59 59 GLU GLU A . n A 1 82 ARG 82 60 60 ARG ARG A . n A 1 83 GLY 83 61 61 GLY GLY A . n A 1 84 ASN 84 62 62 ASN ASN A . n A 1 85 MET 85 63 63 MET MET A . n A 1 86 PRO 86 64 64 PRO PRO A . n A 1 87 VAL 87 65 65 VAL VAL A . n A 1 88 ASP 88 66 66 ASP ASP A . n A 1 89 ALA 89 67 67 ALA ALA A . n A 1 90 SER 90 68 68 SER SER A . n A 1 91 PHE 91 69 69 PHE PHE A . n A 1 92 LYS 92 70 70 LYS LYS A . n A 1 93 GLY 93 71 71 GLY GLY A . n A 1 94 THR 94 72 72 THR THR A . n A 1 95 ARG 95 73 73 ARG ARG A . n A 1 96 GLY 96 74 74 GLY GLY A . n A 1 97 ARG 97 75 75 ARG ARG A . n A 1 98 ARG 98 76 76 ARG ARG A . n A 1 99 ARG 99 77 77 ARG ARG A . n A 1 100 MET 100 78 78 MET MET A . n A 1 101 LEU 101 79 79 LEU LEU A . n A 1 102 ALA 102 80 80 ALA ALA A . n A 1 103 ALA 103 81 81 ALA ALA A . n A 1 104 LEU 104 82 82 LEU LEU A . n A 1 105 ARG 105 83 83 ARG ARG A . n A 1 106 ARG 106 84 84 ARG ARG A . n A 1 107 THR 107 85 85 THR THR A . n A 1 108 ARG 108 86 86 ARG ARG A . n A 1 109 GLY 109 87 87 GLY GLY A . n A 1 110 LEU 110 88 88 LEU LEU A . n A 1 111 GLN 111 89 89 GLN GLN A . n A 1 112 GLU 112 90 90 GLU GLU A . n A 1 113 ILE 113 91 91 ILE ILE A . n A 1 114 GLY 114 92 92 GLY GLY A . n A 1 115 LYS 115 93 93 LYS LYS A . n A 1 116 GLY 116 94 94 GLY GLY A . n A 1 117 ILE 117 95 95 ILE ILE A . n A 1 118 SER 118 96 96 SER SER A . n A 1 119 GLN 119 97 97 GLN GLN A . n A 1 120 ASP 120 98 98 ASP ASP A . n A 1 121 GLY 121 99 99 GLY GLY A . n A 1 122 HIS 122 100 100 HIS HIS A . n A 1 123 HIS 123 101 101 HIS HIS A . n A 1 124 PHE 124 102 102 PHE PHE A . n A 1 125 LEU 125 103 103 LEU LEU A . n A 1 126 VAL 126 104 104 VAL VAL A . n A 1 127 PHE 127 105 105 PHE PHE A . n A 1 128 ARG 128 106 106 ARG ARG A . n A 1 129 VAL 129 107 107 VAL VAL A . n A 1 130 ARG 130 108 108 ARG ARG A . n A 1 131 LYS 131 109 ? ? ? A . n A 1 132 PRO 132 110 ? ? ? A . n B 1 1 MET 1 -21 ? ? ? B . n B 1 2 HIS 2 -20 ? ? ? B . n B 1 3 HIS 3 -19 ? ? ? B . n B 1 4 HIS 4 -18 ? ? ? B . n B 1 5 HIS 5 -17 ? ? ? B . n B 1 6 HIS 6 -16 ? ? ? B . n B 1 7 HIS 7 -15 ? ? ? B . n B 1 8 SER 8 -14 ? ? ? B . n B 1 9 SER 9 -13 ? ? ? B . n B 1 10 GLY 10 -12 ? ? ? B . n B 1 11 VAL 11 -11 ? ? ? B . n B 1 12 ASP 12 -10 ? ? ? B . n B 1 13 LEU 13 -9 ? ? ? B . n B 1 14 GLY 14 -8 ? ? ? B . n B 1 15 THR 15 -7 ? ? ? B . n B 1 16 GLU 16 -6 ? ? ? B . n B 1 17 ASN 17 -5 ? ? ? B . n B 1 18 LEU 18 -4 ? ? ? B . n B 1 19 TYR 19 -3 ? ? ? B . n B 1 20 PHE 20 -2 ? ? ? B . n B 1 21 GLN 21 -1 ? ? ? B . n B 1 22 SER 22 0 ? ? ? B . n B 1 23 MET 23 1 ? ? ? B . n B 1 24 GLY 24 2 ? ? ? B . n B 1 25 LYS 25 3 3 LYS LYS B . n B 1 26 ALA 26 4 4 ALA ALA B . n B 1 27 SER 27 5 5 SER SER B . n B 1 28 ILE 28 6 6 ILE ILE B . n B 1 29 LYS 29 7 7 LYS LYS B . n B 1 30 ASP 30 8 8 ASP ASP B . n B 1 31 TRP 31 9 9 TRP TRP B . n B 1 32 ILE 32 10 10 ILE ILE B . n B 1 33 VAL 33 11 11 VAL VAL B . n B 1 34 CYS 34 12 12 CYS CYS B . n B 1 35 GLN 35 13 13 GLN GLN B . n B 1 36 VAL 36 14 14 VAL VAL B . n B 1 37 ASN 37 15 15 ASN ASN B . n B 1 38 SER 38 16 16 SER SER B . n B 1 39 GLY 39 17 17 GLY GLY B . n B 1 40 LYS 40 18 18 LYS LYS B . n B 1 41 PHE 41 19 19 PHE PHE B . n B 1 42 PRO 42 20 20 PRO PRO B . n B 1 43 GLY 43 21 21 GLY GLY B . n B 1 44 VAL 44 22 22 VAL VAL B . n B 1 45 GLU 45 23 23 GLU GLU B . n B 1 46 TRP 46 24 24 TRP TRP B . n B 1 47 GLU 47 25 25 GLU GLU B . n B 1 48 ASP 48 26 26 ASP ASP B . n B 1 49 GLU 49 27 27 GLU GLU B . n B 1 50 GLU 50 28 28 GLU GLU B . n B 1 51 ARG 51 29 29 ARG ARG B . n B 1 52 THR 52 30 30 THR THR B . n B 1 53 ARG 53 31 31 ARG ARG B . n B 1 54 PHE 54 32 32 PHE PHE B . n B 1 55 ARG 55 33 33 ARG ARG B . n B 1 56 ILE 56 34 34 ILE ILE B . n B 1 57 PRO 57 35 35 PRO PRO B . n B 1 58 VAL 58 36 36 VAL VAL B . n B 1 59 THR 59 37 37 THR THR B . n B 1 60 PRO 60 38 38 PRO PRO B . n B 1 61 LEU 61 39 39 LEU LEU B . n B 1 62 ALA 62 40 40 ALA ALA B . n B 1 63 ASP 63 41 41 ASP ASP B . n B 1 64 PRO 64 42 42 PRO PRO B . n B 1 65 CYS 65 43 43 CYS CYS B . n B 1 66 PHE 66 44 44 PHE PHE B . n B 1 67 GLU 67 45 45 GLU GLU B . n B 1 68 TRP 68 46 46 TRP TRP B . n B 1 69 ARG 69 47 47 ARG ARG B . n B 1 70 ARG 70 48 48 ARG ARG B . n B 1 71 ASP 71 49 49 ASP ASP B . n B 1 72 GLY 72 50 50 GLY GLY B . n B 1 73 GLU 73 51 51 GLU GLU B . n B 1 74 LEU 74 52 52 LEU LEU B . n B 1 75 GLY 75 53 53 GLY GLY B . n B 1 76 VAL 76 54 54 VAL VAL B . n B 1 77 VAL 77 55 55 VAL VAL B . n B 1 78 TYR 78 56 56 TYR TYR B . n B 1 79 ILE 79 57 57 ILE ILE B . n B 1 80 ARG 80 58 58 ARG ARG B . n B 1 81 GLU 81 59 59 GLU GLU B . n B 1 82 ARG 82 60 60 ARG ARG B . n B 1 83 GLY 83 61 61 GLY GLY B . n B 1 84 ASN 84 62 62 ASN ASN B . n B 1 85 MET 85 63 63 MET MET B . n B 1 86 PRO 86 64 64 PRO PRO B . n B 1 87 VAL 87 65 65 VAL VAL B . n B 1 88 ASP 88 66 66 ASP ASP B . n B 1 89 ALA 89 67 67 ALA ALA B . n B 1 90 SER 90 68 68 SER SER B . n B 1 91 PHE 91 69 69 PHE PHE B . n B 1 92 LYS 92 70 70 LYS LYS B . n B 1 93 GLY 93 71 71 GLY GLY B . n B 1 94 THR 94 72 72 THR THR B . n B 1 95 ARG 95 73 73 ARG ARG B . n B 1 96 GLY 96 74 74 GLY GLY B . n B 1 97 ARG 97 75 75 ARG ARG B . n B 1 98 ARG 98 76 76 ARG ARG B . n B 1 99 ARG 99 77 77 ARG ARG B . n B 1 100 MET 100 78 78 MET MET B . n B 1 101 LEU 101 79 79 LEU LEU B . n B 1 102 ALA 102 80 80 ALA ALA B . n B 1 103 ALA 103 81 81 ALA ALA B . n B 1 104 LEU 104 82 82 LEU LEU B . n B 1 105 ARG 105 83 83 ARG ARG B . n B 1 106 ARG 106 84 84 ARG ARG B . n B 1 107 THR 107 85 85 THR THR B . n B 1 108 ARG 108 86 86 ARG ARG B . n B 1 109 GLY 109 87 87 GLY GLY B . n B 1 110 LEU 110 88 88 LEU LEU B . n B 1 111 GLN 111 89 89 GLN GLN B . n B 1 112 GLU 112 90 90 GLU GLU B . n B 1 113 ILE 113 91 91 ILE ILE B . n B 1 114 GLY 114 92 92 GLY GLY B . n B 1 115 LYS 115 93 93 LYS LYS B . n B 1 116 GLY 116 94 94 GLY GLY B . n B 1 117 ILE 117 95 95 ILE ILE B . n B 1 118 SER 118 96 96 SER SER B . n B 1 119 GLN 119 97 97 GLN GLN B . n B 1 120 ASP 120 98 98 ASP ASP B . n B 1 121 GLY 121 99 99 GLY GLY B . n B 1 122 HIS 122 100 100 HIS HIS B . n B 1 123 HIS 123 101 101 HIS HIS B . n B 1 124 PHE 124 102 102 PHE PHE B . n B 1 125 LEU 125 103 103 LEU LEU B . n B 1 126 VAL 126 104 104 VAL VAL B . n B 1 127 PHE 127 105 105 PHE PHE B . n B 1 128 ARG 128 106 106 ARG ARG B . n B 1 129 VAL 129 107 107 VAL VAL B . n B 1 130 ARG 130 108 108 ARG ARG B . n B 1 131 LYS 131 109 ? ? ? B . n B 1 132 PRO 132 110 ? ? ? B . n C 2 1 DG 1 1 1 DG GD C . n C 2 2 DC 2 2 2 DC CD C . n C 2 3 DG 3 3 3 DG GD C . n C 2 4 DT 4 4 4 DT TD C . n C 2 5 DC 5 5 5 DC CD C . n C 2 6 DG 6 6 6 DG GD C . n C 2 7 DA 7 7 7 DA AD C . n C 2 8 DG 8 8 8 DG GD C . n C 2 9 DA 9 9 9 DA AD C . n C 2 10 DC 10 10 10 DC CD C . n C 2 11 DG 11 11 11 DG GD C . n C 2 12 DC 12 12 12 DC CD C . n D 2 1 DG 1 1 1 DG GD D . n D 2 2 DC 2 2 2 DC CD D . n D 2 3 DG 3 3 3 DG GD D . n D 2 4 DT 4 4 4 DT TD D . n D 2 5 DC 5 5 5 DC CD D . n D 2 6 DG 6 6 6 DG GD D . n D 2 7 DA 7 7 7 DA AD D . n D 2 8 DG 8 8 8 DG GD D . n D 2 9 DA 9 9 9 DA AD D . n D 2 10 DC 10 10 10 DC CD D . n D 2 11 DG 11 11 11 DG GD D . n D 2 12 DC 12 12 12 DC CD D . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code E 3 HOH 1 201 1 HOH HOH A . E 3 HOH 2 202 2 HOH HOH A . E 3 HOH 3 203 3 HOH HOH A . E 3 HOH 4 204 4 HOH HOH A . E 3 HOH 5 205 5 HOH HOH A . E 3 HOH 6 206 6 HOH HOH A . E 3 HOH 7 207 9 HOH HOH A . E 3 HOH 8 208 10 HOH HOH A . E 3 HOH 9 209 12 HOH HOH A . E 3 HOH 10 210 14 HOH HOH A . E 3 HOH 11 211 17 HOH HOH A . E 3 HOH 12 212 22 HOH HOH A . E 3 HOH 13 213 26 HOH HOH A . E 3 HOH 14 214 30 HOH HOH A . E 3 HOH 15 215 31 HOH HOH A . E 3 HOH 16 216 35 HOH HOH A . E 3 HOH 17 217 39 HOH HOH A . E 3 HOH 18 218 40 HOH HOH A . E 3 HOH 19 219 57 HOH HOH A . E 3 HOH 20 220 58 HOH HOH A . E 3 HOH 21 221 60 HOH HOH A . E 3 HOH 22 222 61 HOH HOH A . E 3 HOH 23 223 65 HOH HOH A . E 3 HOH 24 224 75 HOH HOH A . E 3 HOH 25 225 90 HOH HOH A . E 3 HOH 26 226 98 HOH HOH A . E 3 HOH 27 227 99 HOH HOH A . E 3 HOH 28 228 110 HOH HOH A . E 3 HOH 29 229 113 HOH HOH A . E 3 HOH 30 230 117 HOH HOH A . E 3 HOH 31 231 118 HOH HOH A . E 3 HOH 32 232 123 HOH HOH A . E 3 HOH 33 233 127 HOH HOH A . E 3 HOH 34 234 132 HOH HOH A . E 3 HOH 35 235 133 HOH HOH A . E 3 HOH 36 236 134 HOH HOH A . E 3 HOH 37 237 137 HOH HOH A . E 3 HOH 38 238 138 HOH HOH A . E 3 HOH 39 239 149 HOH HOH A . E 3 HOH 40 240 153 HOH HOH A . E 3 HOH 41 241 154 HOH HOH A . E 3 HOH 42 242 157 HOH HOH A . E 3 HOH 43 243 159 HOH HOH A . E 3 HOH 44 244 161 HOH HOH A . E 3 HOH 45 245 164 HOH HOH A . E 3 HOH 46 246 165 HOH HOH A . E 3 HOH 47 247 166 HOH HOH A . E 3 HOH 48 248 168 HOH HOH A . E 3 HOH 49 249 175 HOH HOH A . E 3 HOH 50 250 176 HOH HOH A . E 3 HOH 51 251 179 HOH HOH A . E 3 HOH 52 252 205 HOH HOH A . E 3 HOH 53 253 208 HOH HOH A . E 3 HOH 54 254 211 HOH HOH A . E 3 HOH 55 255 221 HOH HOH A . E 3 HOH 56 256 222 HOH HOH A . E 3 HOH 57 257 229 HOH HOH A . E 3 HOH 58 258 230 HOH HOH A . E 3 HOH 59 259 231 HOH HOH A . E 3 HOH 60 260 232 HOH HOH A . E 3 HOH 61 261 146 HOH HOH A . E 3 HOH 62 262 141 HOH HOH A . E 3 HOH 63 263 151 HOH HOH A . E 3 HOH 64 264 201 HOH HOH A . E 3 HOH 65 265 202 HOH HOH A . E 3 HOH 66 266 204 HOH HOH A . E 3 HOH 67 267 203 HOH HOH A . F 3 HOH 1 201 183 HOH HOH B . F 3 HOH 2 202 207 HOH HOH B . F 3 HOH 3 203 8 HOH HOH B . F 3 HOH 4 204 13 HOH HOH B . F 3 HOH 5 205 15 HOH HOH B . F 3 HOH 6 206 19 HOH HOH B . F 3 HOH 7 207 20 HOH HOH B . F 3 HOH 8 208 21 HOH HOH B . F 3 HOH 9 209 23 HOH HOH B . F 3 HOH 10 210 24 HOH HOH B . F 3 HOH 11 211 25 HOH HOH B . F 3 HOH 12 212 27 HOH HOH B . F 3 HOH 13 213 28 HOH HOH B . F 3 HOH 14 214 29 HOH HOH B . F 3 HOH 15 215 43 HOH HOH B . F 3 HOH 16 216 46 HOH HOH B . F 3 HOH 17 217 56 HOH HOH B . F 3 HOH 18 218 62 HOH HOH B . F 3 HOH 19 219 63 HOH HOH B . F 3 HOH 20 220 66 HOH HOH B . F 3 HOH 21 221 67 HOH HOH B . F 3 HOH 22 222 70 HOH HOH B . F 3 HOH 23 223 73 HOH HOH B . F 3 HOH 24 224 77 HOH HOH B . F 3 HOH 25 225 79 HOH HOH B . F 3 HOH 26 226 81 HOH HOH B . F 3 HOH 27 227 83 HOH HOH B . F 3 HOH 28 228 84 HOH HOH B . F 3 HOH 29 229 88 HOH HOH B . F 3 HOH 30 230 93 HOH HOH B . F 3 HOH 31 231 96 HOH HOH B . F 3 HOH 32 232 100 HOH HOH B . F 3 HOH 33 233 104 HOH HOH B . F 3 HOH 34 234 106 HOH HOH B . F 3 HOH 35 235 112 HOH HOH B . F 3 HOH 36 236 119 HOH HOH B . F 3 HOH 37 237 120 HOH HOH B . F 3 HOH 38 238 121 HOH HOH B . F 3 HOH 39 239 122 HOH HOH B . F 3 HOH 40 240 125 HOH HOH B . F 3 HOH 41 241 126 HOH HOH B . F 3 HOH 42 242 128 HOH HOH B . F 3 HOH 43 243 135 HOH HOH B . F 3 HOH 44 244 136 HOH HOH B . F 3 HOH 45 245 139 HOH HOH B . F 3 HOH 46 246 142 HOH HOH B . F 3 HOH 47 247 143 HOH HOH B . F 3 HOH 48 248 145 HOH HOH B . F 3 HOH 49 249 147 HOH HOH B . F 3 HOH 50 250 155 HOH HOH B . F 3 HOH 51 251 156 HOH HOH B . F 3 HOH 52 252 160 HOH HOH B . F 3 HOH 53 253 167 HOH HOH B . F 3 HOH 54 254 170 HOH HOH B . F 3 HOH 55 255 171 HOH HOH B . F 3 HOH 56 256 172 HOH HOH B . F 3 HOH 57 257 181 HOH HOH B . F 3 HOH 58 258 182 HOH HOH B . F 3 HOH 59 259 184 HOH HOH B . F 3 HOH 60 260 185 HOH HOH B . F 3 HOH 61 261 186 HOH HOH B . F 3 HOH 62 262 187 HOH HOH B . F 3 HOH 63 263 188 HOH HOH B . F 3 HOH 64 264 189 HOH HOH B . F 3 HOH 65 265 190 HOH HOH B . F 3 HOH 66 266 191 HOH HOH B . F 3 HOH 67 267 192 HOH HOH B . F 3 HOH 68 268 193 HOH HOH B . F 3 HOH 69 269 194 HOH HOH B . F 3 HOH 70 270 197 HOH HOH B . F 3 HOH 71 271 198 HOH HOH B . F 3 HOH 72 272 210 HOH HOH B . F 3 HOH 73 273 212 HOH HOH B . F 3 HOH 74 274 213 HOH HOH B . F 3 HOH 75 275 214 HOH HOH B . F 3 HOH 76 276 215 HOH HOH B . F 3 HOH 77 277 216 HOH HOH B . F 3 HOH 78 278 217 HOH HOH B . F 3 HOH 79 279 218 HOH HOH B . F 3 HOH 80 280 219 HOH HOH B . F 3 HOH 81 281 220 HOH HOH B . F 3 HOH 82 282 223 HOH HOH B . F 3 HOH 83 283 224 HOH HOH B . F 3 HOH 84 284 225 HOH HOH B . F 3 HOH 85 285 226 HOH HOH B . F 3 HOH 86 286 227 HOH HOH B . F 3 HOH 87 287 228 HOH HOH B . F 3 HOH 88 288 150 HOH HOH B . G 3 HOH 1 101 103 HOH HOH C . G 3 HOH 2 102 7 HOH HOH C . G 3 HOH 3 103 16 HOH HOH C . G 3 HOH 4 104 32 HOH HOH C . G 3 HOH 5 105 42 HOH HOH C . G 3 HOH 6 106 48 HOH HOH C . G 3 HOH 7 107 49 HOH HOH C . G 3 HOH 8 108 51 HOH HOH C . G 3 HOH 9 109 52 HOH HOH C . G 3 HOH 10 110 53 HOH HOH C . G 3 HOH 11 111 54 HOH HOH C . G 3 HOH 12 112 72 HOH HOH C . G 3 HOH 13 113 74 HOH HOH C . G 3 HOH 14 114 80 HOH HOH C . G 3 HOH 15 115 82 HOH HOH C . G 3 HOH 16 116 85 HOH HOH C . G 3 HOH 17 117 87 HOH HOH C . G 3 HOH 18 118 91 HOH HOH C . G 3 HOH 19 119 97 HOH HOH C . G 3 HOH 20 120 101 HOH HOH C . G 3 HOH 21 121 105 HOH HOH C . G 3 HOH 22 122 107 HOH HOH C . G 3 HOH 23 123 109 HOH HOH C . G 3 HOH 24 124 111 HOH HOH C . G 3 HOH 25 125 114 HOH HOH C . G 3 HOH 26 126 115 HOH HOH C . G 3 HOH 27 127 116 HOH HOH C . G 3 HOH 28 128 124 HOH HOH C . G 3 HOH 29 129 131 HOH HOH C . G 3 HOH 30 130 140 HOH HOH C . G 3 HOH 31 131 148 HOH HOH C . G 3 HOH 32 132 152 HOH HOH C . G 3 HOH 33 133 158 HOH HOH C . G 3 HOH 34 134 162 HOH HOH C . G 3 HOH 35 135 169 HOH HOH C . G 3 HOH 36 136 178 HOH HOH C . G 3 HOH 37 137 196 HOH HOH C . G 3 HOH 38 138 199 HOH HOH C . G 3 HOH 39 139 200 HOH HOH C . H 3 HOH 1 101 11 HOH HOH D . H 3 HOH 2 102 18 HOH HOH D . H 3 HOH 3 103 33 HOH HOH D . H 3 HOH 4 104 34 HOH HOH D . H 3 HOH 5 105 36 HOH HOH D . H 3 HOH 6 106 37 HOH HOH D . H 3 HOH 7 107 38 HOH HOH D . H 3 HOH 8 108 41 HOH HOH D . H 3 HOH 9 109 44 HOH HOH D . H 3 HOH 10 110 45 HOH HOH D . H 3 HOH 11 111 47 HOH HOH D . H 3 HOH 12 112 50 HOH HOH D . H 3 HOH 13 113 55 HOH HOH D . H 3 HOH 14 114 59 HOH HOH D . H 3 HOH 15 115 64 HOH HOH D . H 3 HOH 16 116 68 HOH HOH D . H 3 HOH 17 117 69 HOH HOH D . H 3 HOH 18 118 71 HOH HOH D . H 3 HOH 19 119 76 HOH HOH D . H 3 HOH 20 120 78 HOH HOH D . H 3 HOH 21 121 86 HOH HOH D . H 3 HOH 22 122 89 HOH HOH D . H 3 HOH 23 123 92 HOH HOH D . H 3 HOH 24 124 94 HOH HOH D . H 3 HOH 25 125 95 HOH HOH D . H 3 HOH 26 126 102 HOH HOH D . H 3 HOH 27 127 108 HOH HOH D . H 3 HOH 28 128 129 HOH HOH D . H 3 HOH 29 129 130 HOH HOH D . H 3 HOH 30 130 144 HOH HOH D . H 3 HOH 31 131 163 HOH HOH D . H 3 HOH 32 132 173 HOH HOH D . H 3 HOH 33 133 174 HOH HOH D . H 3 HOH 34 134 177 HOH HOH D . H 3 HOH 35 135 180 HOH HOH D . H 3 HOH 36 136 195 HOH HOH D . H 3 HOH 37 137 206 HOH HOH D . H 3 HOH 38 138 209 HOH HOH D . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal HKL-2000 'data collection' . ? 1 PHASER phasing . ? 2 REFMAC refinement 5.7.0029 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 # _cell.entry_id 4HLY _cell.length_a 38.536 _cell.length_b 38.577 _cell.length_c 48.562 _cell.angle_alpha 91.32 _cell.angle_beta 88.48 _cell.angle_gamma 63.13 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4HLY _symmetry.space_group_name_H-M 'P 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 1 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4HLY _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 1.69 _exptl_crystal.density_percent_sol 27.35 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 298 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 4.2 _exptl_crystal_grow.pdbx_details '0.1M phosphate citrate pH 4.2, 40% PEG 300, VAPOR DIFFUSION, HANGING DROP, temperature 298K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 110 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'RAYONIX MX300HE' _diffrn_detector.pdbx_collection_date 2010-09-29 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Rh Coated Mirror' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.96722 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'NSRRC BEAMLINE BL13C1' _diffrn_source.pdbx_synchrotron_site NSRRC _diffrn_source.pdbx_synchrotron_beamline BL13C1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.96722 # _reflns.entry_id 4HLY _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.48 _reflns.number_obs 41661 _reflns.number_all 41661 _reflns.percent_possible_obs 99.5 _reflns.pdbx_Rmerge_I_obs 0.106 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.48 _reflns_shell.d_res_low ? _reflns_shell.percent_possible_all 92.8 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.507 _reflns_shell.meanI_over_sigI_obs 2.3 _reflns_shell.pdbx_redundancy 3.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 41661 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4HLY _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 37481 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F ? _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 19.53 _refine.ls_d_res_high 1.48 _refine.ls_percent_reflns_obs 94.05 _refine.ls_R_factor_obs 0.19792 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19640 _refine.ls_R_factor_R_free 0.22788 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.9 _refine.ls_number_reflns_R_free 1941 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.959 _refine.correlation_coeff_Fo_to_Fc_free 0.942 _refine.B_iso_mean 21.589 _refine.aniso_B[1][1] 7.03 _refine.aniso_B[2][2] -5.23 _refine.aniso_B[3][3] -1.80 _refine.aniso_B[1][2] 7.63 _refine.aniso_B[1][3] -4.00 _refine.aniso_B[2][3] -0.42 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN USED IF PRESENT IN THE INPUT' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.019 _refine.pdbx_overall_ESU_R_Free 0.019 _refine.overall_SU_ML 0.050 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 1.216 _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1734 _refine_hist.pdbx_number_atoms_nucleic_acid 490 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 232 _refine_hist.number_atoms_total 2456 _refine_hist.d_res_high 1.48 _refine_hist.d_res_low 19.53 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function r_bond_refined_d 0.005 0.017 ? 2368 'X-RAY DIFFRACTION' ? r_bond_other_d ? ? ? ? 'X-RAY DIFFRACTION' ? r_angle_refined_deg 1.107 1.739 ? 3292 'X-RAY DIFFRACTION' ? r_angle_other_deg ? ? ? ? 'X-RAY DIFFRACTION' ? r_dihedral_angle_1_deg 4.950 5.000 ? 220 'X-RAY DIFFRACTION' ? r_dihedral_angle_2_deg 25.754 20.625 ? 96 'X-RAY DIFFRACTION' ? r_dihedral_angle_3_deg 13.224 15.000 ? 329 'X-RAY DIFFRACTION' ? r_dihedral_angle_4_deg 18.118 15.000 ? 33 'X-RAY DIFFRACTION' ? r_chiral_restr 0.083 0.200 ? 317 'X-RAY DIFFRACTION' ? r_gen_planes_refined 0.005 0.021 ? 1681 'X-RAY DIFFRACTION' ? r_gen_planes_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_nbtor_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_xyhbond_nbd_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_vdw_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_hbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_refined ? ? ? ? 'X-RAY DIFFRACTION' ? r_symmetry_metal_ion_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcbond_other ? ? ? ? 'X-RAY DIFFRACTION' ? r_mcangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scbond_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_scangle_it ? ? ? ? 'X-RAY DIFFRACTION' ? r_rigid_bond_restr ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_free ? ? ? ? 'X-RAY DIFFRACTION' ? r_sphericity_bonded ? ? ? ? 'X-RAY DIFFRACTION' ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.476 _refine_ls_shell.d_res_low 1.514 _refine_ls_shell.number_reflns_R_work 2514 _refine_ls_shell.R_factor_R_work 0.282 _refine_ls_shell.percent_reflns_obs 85.50 _refine_ls_shell.R_factor_R_free 0.305 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 127 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.number_reflns_obs ? # _database_PDB_matrix.entry_id 4HLY _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4HLY _struct.title 'The complex crystal structure of the DNA binding domain of vIRF-1 from the oncogenic KSHV with DNA' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4HLY _struct_keywords.pdbx_keywords 'DNA BINDING PROTEIN/DNA' _struct_keywords.text 'helix-turn-helix, DNA BINDING PROTEIN-DNA complex' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q77Q82_HHV8 Q77Q82 1 ;GKASIKDWIVCQVNSGKFPGVEWEDEERTRFRIPVTPLADPCFEWRRDGELGVVYIRERGNMPVDASFKGTRGRRRMLAA LRRTRGLQEIGKGISQDGHHFLVFRVRKP ; 88 ? 2 PDB 4HLY 4HLY 2 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4HLY A 24 ? 132 ? Q77Q82 88 ? 196 ? 2 110 2 1 4HLY B 24 ? 132 ? Q77Q82 88 ? 196 ? 2 110 3 2 4HLY C 1 ? 12 ? 4HLY 1 ? 12 ? 1 12 4 2 4HLY D 1 ? 12 ? 4HLY 1 ? 12 ? 1 12 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4HLY MET A 1 ? UNP Q77Q82 ? ? 'expression tag' -21 1 1 4HLY HIS A 2 ? UNP Q77Q82 ? ? 'expression tag' -20 2 1 4HLY HIS A 3 ? UNP Q77Q82 ? ? 'expression tag' -19 3 1 4HLY HIS A 4 ? UNP Q77Q82 ? ? 'expression tag' -18 4 1 4HLY HIS A 5 ? UNP Q77Q82 ? ? 'expression tag' -17 5 1 4HLY HIS A 6 ? UNP Q77Q82 ? ? 'expression tag' -16 6 1 4HLY HIS A 7 ? UNP Q77Q82 ? ? 'expression tag' -15 7 1 4HLY SER A 8 ? UNP Q77Q82 ? ? 'expression tag' -14 8 1 4HLY SER A 9 ? UNP Q77Q82 ? ? 'expression tag' -13 9 1 4HLY GLY A 10 ? UNP Q77Q82 ? ? 'expression tag' -12 10 1 4HLY VAL A 11 ? UNP Q77Q82 ? ? 'expression tag' -11 11 1 4HLY ASP A 12 ? UNP Q77Q82 ? ? 'expression tag' -10 12 1 4HLY LEU A 13 ? UNP Q77Q82 ? ? 'expression tag' -9 13 1 4HLY GLY A 14 ? UNP Q77Q82 ? ? 'expression tag' -8 14 1 4HLY THR A 15 ? UNP Q77Q82 ? ? 'expression tag' -7 15 1 4HLY GLU A 16 ? UNP Q77Q82 ? ? 'expression tag' -6 16 1 4HLY ASN A 17 ? UNP Q77Q82 ? ? 'expression tag' -5 17 1 4HLY LEU A 18 ? UNP Q77Q82 ? ? 'expression tag' -4 18 1 4HLY TYR A 19 ? UNP Q77Q82 ? ? 'expression tag' -3 19 1 4HLY PHE A 20 ? UNP Q77Q82 ? ? 'expression tag' -2 20 1 4HLY GLN A 21 ? UNP Q77Q82 ? ? 'expression tag' -1 21 1 4HLY SER A 22 ? UNP Q77Q82 ? ? 'expression tag' 0 22 1 4HLY MET A 23 ? UNP Q77Q82 ? ? 'expression tag' 1 23 2 4HLY MET B 1 ? UNP Q77Q82 ? ? 'expression tag' -21 24 2 4HLY HIS B 2 ? UNP Q77Q82 ? ? 'expression tag' -20 25 2 4HLY HIS B 3 ? UNP Q77Q82 ? ? 'expression tag' -19 26 2 4HLY HIS B 4 ? UNP Q77Q82 ? ? 'expression tag' -18 27 2 4HLY HIS B 5 ? UNP Q77Q82 ? ? 'expression tag' -17 28 2 4HLY HIS B 6 ? UNP Q77Q82 ? ? 'expression tag' -16 29 2 4HLY HIS B 7 ? UNP Q77Q82 ? ? 'expression tag' -15 30 2 4HLY SER B 8 ? UNP Q77Q82 ? ? 'expression tag' -14 31 2 4HLY SER B 9 ? UNP Q77Q82 ? ? 'expression tag' -13 32 2 4HLY GLY B 10 ? UNP Q77Q82 ? ? 'expression tag' -12 33 2 4HLY VAL B 11 ? UNP Q77Q82 ? ? 'expression tag' -11 34 2 4HLY ASP B 12 ? UNP Q77Q82 ? ? 'expression tag' -10 35 2 4HLY LEU B 13 ? UNP Q77Q82 ? ? 'expression tag' -9 36 2 4HLY GLY B 14 ? UNP Q77Q82 ? ? 'expression tag' -8 37 2 4HLY THR B 15 ? UNP Q77Q82 ? ? 'expression tag' -7 38 2 4HLY GLU B 16 ? UNP Q77Q82 ? ? 'expression tag' -6 39 2 4HLY ASN B 17 ? UNP Q77Q82 ? ? 'expression tag' -5 40 2 4HLY LEU B 18 ? UNP Q77Q82 ? ? 'expression tag' -4 41 2 4HLY TYR B 19 ? UNP Q77Q82 ? ? 'expression tag' -3 42 2 4HLY PHE B 20 ? UNP Q77Q82 ? ? 'expression tag' -2 43 2 4HLY GLN B 21 ? UNP Q77Q82 ? ? 'expression tag' -1 44 2 4HLY SER B 22 ? UNP Q77Q82 ? ? 'expression tag' 0 45 2 4HLY MET B 23 ? UNP Q77Q82 ? ? 'expression tag' 1 46 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details hexameric _pdbx_struct_assembly.oligomeric_count 6 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,E 1 2 C,D,G,H 1 3 B,C,D,F,G,H # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'crystal symmetry operation' 1_556 x,y,z+1 1.0000000000 0.0000000000 0.0000000000 1.2881504130 0.0000000000 1.0000000000 0.0000000000 -1.9067558038 0.0000000000 0.0000000000 1.0000000000 48.5074509206 2 'crystal symmetry operation' 1_645 x+1,y-1,z 1.0000000000 0.0000000000 0.0000000000 21.1004419129 0.0000000000 1.0000000000 0.0000000000 -34.4120072532 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 SER A 27 ? GLY A 39 ? SER A 5 GLY A 17 1 ? 13 HELX_P HELX_P2 2 GLU A 67 ? GLY A 72 ? GLU A 45 GLY A 50 1 ? 6 HELX_P HELX_P3 3 GLY A 72 ? ARG A 82 ? GLY A 50 ARG A 60 1 ? 11 HELX_P HELX_P4 4 ASP A 88 ? LYS A 92 ? ASP A 66 LYS A 70 5 ? 5 HELX_P HELX_P5 5 THR A 94 ? ARG A 106 ? THR A 72 ARG A 84 1 ? 13 HELX_P HELX_P6 6 SER B 27 ? GLY B 39 ? SER B 5 GLY B 17 1 ? 13 HELX_P HELX_P7 7 GLU B 67 ? GLY B 72 ? GLU B 45 GLY B 50 1 ? 6 HELX_P HELX_P8 8 GLY B 72 ? GLY B 83 ? GLY B 50 GLY B 61 1 ? 12 HELX_P HELX_P9 9 ASP B 88 ? LYS B 92 ? ASP B 66 LYS B 70 5 ? 5 HELX_P HELX_P10 10 THR B 94 ? THR B 107 ? THR B 72 THR B 85 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DG 1 N1 ? ? ? 1_555 D DC 12 N3 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DG 1 N2 ? ? ? 1_555 D DC 12 O2 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 1 O6 ? ? ? 1_555 D DC 12 N4 ? ? C DG 1 D DC 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DC 2 N3 ? ? ? 1_555 D DG 11 N1 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DC 2 N4 ? ? ? 1_555 D DG 11 O6 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DC 2 O2 ? ? ? 1_555 D DG 11 N2 ? ? C DC 2 D DG 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DG 3 N1 ? ? ? 1_555 D DC 10 N3 ? ? C DG 3 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DG 3 N2 ? ? ? 1_555 D DC 10 O2 ? ? C DG 3 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DG 3 O6 ? ? ? 1_555 D DC 10 N4 ? ? C DG 3 D DC 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 9 N1 ? ? C DT 4 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 9 N6 ? ? C DT 4 D DA 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DC 5 N3 ? ? ? 1_555 D DG 8 N1 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DC 5 N4 ? ? ? 1_555 D DG 8 O6 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog14 hydrog ? ? C DC 5 O2 ? ? ? 1_555 D DG 8 N2 ? ? C DC 5 D DG 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DG 6 N2 ? ? ? 1_555 D DA 7 N7 ? ? C DG 6 D DA 7 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog16 hydrog ? ? C DG 6 N3 ? ? ? 1_555 D DA 7 N6 ? ? C DG 6 D DA 7 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog17 hydrog ? ? C DA 7 N6 ? ? ? 1_555 D DG 6 N3 ? ? C DA 7 D DG 6 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog18 hydrog ? ? C DA 7 N7 ? ? ? 1_555 D DG 6 N2 ? ? C DA 7 D DG 6 1_555 ? ? ? ? ? ? TYPE_11_PAIR ? ? ? hydrog19 hydrog ? ? C DG 8 N1 ? ? ? 1_555 D DC 5 N3 ? ? C DG 8 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DG 8 N2 ? ? ? 1_555 D DC 5 O2 ? ? C DG 8 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DG 8 O6 ? ? ? 1_555 D DC 5 N4 ? ? C DG 8 D DC 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 4 N3 ? ? C DA 9 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 4 O4 ? ? C DA 9 D DT 4 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog24 hydrog ? ? C DC 10 N3 ? ? ? 1_555 D DG 3 N1 ? ? C DC 10 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DC 10 N4 ? ? ? 1_555 D DG 3 O6 ? ? C DC 10 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DC 10 O2 ? ? ? 1_555 D DG 3 N2 ? ? C DC 10 D DG 3 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DG 11 N1 ? ? ? 1_555 D DC 2 N3 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DG 11 N2 ? ? ? 1_555 D DC 2 O2 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DG 11 O6 ? ? ? 1_555 D DC 2 N4 ? ? C DG 11 D DC 2 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 12 N3 ? ? ? 1_555 D DG 1 N1 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 12 N4 ? ? ? 1_555 D DG 1 O6 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 12 O2 ? ? ? 1_555 D DG 1 N2 ? ? C DC 12 D DG 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 4 ? B ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 45 ? TRP A 46 ? GLU A 23 TRP A 24 A 2 ARG A 53 ? PRO A 57 ? ARG A 31 PRO A 35 A 3 HIS A 123 ? VAL A 129 ? HIS A 101 VAL A 107 A 4 LEU A 110 ? ILE A 117 ? LEU A 88 ILE A 95 B 1 GLU B 45 ? TRP B 46 ? GLU B 23 TRP B 24 B 2 ARG B 53 ? PRO B 57 ? ARG B 31 PRO B 35 B 3 HIS B 123 ? VAL B 129 ? HIS B 101 VAL B 107 B 4 LEU B 110 ? ILE B 117 ? LEU B 88 ILE B 95 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 45 ? N GLU A 23 O ARG A 55 ? O ARG A 33 A 2 3 N ILE A 56 ? N ILE A 34 O LEU A 125 ? O LEU A 103 A 3 4 O VAL A 126 ? O VAL A 104 N ILE A 113 ? N ILE A 91 B 1 2 N GLU B 45 ? N GLU B 23 O ARG B 55 ? O ARG B 33 B 2 3 N PHE B 54 ? N PHE B 32 O PHE B 127 ? O PHE B 105 B 3 4 O VAL B 126 ? O VAL B 104 N ILE B 113 ? N ILE B 91 # _pdbx_validate_symm_contact.id 1 _pdbx_validate_symm_contact.PDB_model_num 1 _pdbx_validate_symm_contact.auth_atom_id_1 NH2 _pdbx_validate_symm_contact.auth_asym_id_1 B _pdbx_validate_symm_contact.auth_comp_id_1 ARG _pdbx_validate_symm_contact.auth_seq_id_1 76 _pdbx_validate_symm_contact.PDB_ins_code_1 ? _pdbx_validate_symm_contact.label_alt_id_1 ? _pdbx_validate_symm_contact.site_symmetry_1 1_555 _pdbx_validate_symm_contact.auth_atom_id_2 O6 _pdbx_validate_symm_contact.auth_asym_id_2 D _pdbx_validate_symm_contact.auth_comp_id_2 DG _pdbx_validate_symm_contact.auth_seq_id_2 11 _pdbx_validate_symm_contact.PDB_ins_code_2 ? _pdbx_validate_symm_contact.label_alt_id_2 ? _pdbx_validate_symm_contact.site_symmetry_2 1_645 _pdbx_validate_symm_contact.dist 2.18 # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "C1'" C DT 4 ? ? "O4'" C DT 4 ? ? "C4'" C DT 4 ? ? 97.87 110.10 -12.23 1.00 N 2 1 N1 C DT 4 ? ? "C1'" C DT 4 ? ? "C2'" C DT 4 ? ? 125.01 114.30 10.71 1.40 N # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A MET -21 ? A MET 1 2 1 Y 1 A HIS -20 ? A HIS 2 3 1 Y 1 A HIS -19 ? A HIS 3 4 1 Y 1 A HIS -18 ? A HIS 4 5 1 Y 1 A HIS -17 ? A HIS 5 6 1 Y 1 A HIS -16 ? A HIS 6 7 1 Y 1 A HIS -15 ? A HIS 7 8 1 Y 1 A SER -14 ? A SER 8 9 1 Y 1 A SER -13 ? A SER 9 10 1 Y 1 A GLY -12 ? A GLY 10 11 1 Y 1 A VAL -11 ? A VAL 11 12 1 Y 1 A ASP -10 ? A ASP 12 13 1 Y 1 A LEU -9 ? A LEU 13 14 1 Y 1 A GLY -8 ? A GLY 14 15 1 Y 1 A THR -7 ? A THR 15 16 1 Y 1 A GLU -6 ? A GLU 16 17 1 Y 1 A ASN -5 ? A ASN 17 18 1 Y 1 A LEU -4 ? A LEU 18 19 1 Y 1 A TYR -3 ? A TYR 19 20 1 Y 1 A PHE -2 ? A PHE 20 21 1 Y 1 A GLN -1 ? A GLN 21 22 1 Y 1 A SER 0 ? A SER 22 23 1 Y 1 A MET 1 ? A MET 23 24 1 Y 1 A GLY 2 ? A GLY 24 25 1 Y 1 A LYS 109 ? A LYS 131 26 1 Y 1 A PRO 110 ? A PRO 132 27 1 Y 1 B MET -21 ? B MET 1 28 1 Y 1 B HIS -20 ? B HIS 2 29 1 Y 1 B HIS -19 ? B HIS 3 30 1 Y 1 B HIS -18 ? B HIS 4 31 1 Y 1 B HIS -17 ? B HIS 5 32 1 Y 1 B HIS -16 ? B HIS 6 33 1 Y 1 B HIS -15 ? B HIS 7 34 1 Y 1 B SER -14 ? B SER 8 35 1 Y 1 B SER -13 ? B SER 9 36 1 Y 1 B GLY -12 ? B GLY 10 37 1 Y 1 B VAL -11 ? B VAL 11 38 1 Y 1 B ASP -10 ? B ASP 12 39 1 Y 1 B LEU -9 ? B LEU 13 40 1 Y 1 B GLY -8 ? B GLY 14 41 1 Y 1 B THR -7 ? B THR 15 42 1 Y 1 B GLU -6 ? B GLU 16 43 1 Y 1 B ASN -5 ? B ASN 17 44 1 Y 1 B LEU -4 ? B LEU 18 45 1 Y 1 B TYR -3 ? B TYR 19 46 1 Y 1 B PHE -2 ? B PHE 20 47 1 Y 1 B GLN -1 ? B GLN 21 48 1 Y 1 B SER 0 ? B SER 22 49 1 Y 1 B MET 1 ? B MET 23 50 1 Y 1 B GLY 2 ? B GLY 24 51 1 Y 1 B LYS 109 ? B LYS 131 52 1 Y 1 B PRO 110 ? B PRO 132 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CYS N N N N 74 CYS CA C N R 75 CYS C C N N 76 CYS O O N N 77 CYS CB C N N 78 CYS SG S N N 79 CYS OXT O N N 80 CYS H H N N 81 CYS H2 H N N 82 CYS HA H N N 83 CYS HB2 H N N 84 CYS HB3 H N N 85 CYS HG H N N 86 CYS HXT H N N 87 DA OP3 O N N 88 DA P P N N 89 DA OP1 O N N 90 DA OP2 O N N 91 DA "O5'" O N N 92 DA "C5'" C N N 93 DA "C4'" C N R 94 DA "O4'" O N N 95 DA "C3'" C N S 96 DA "O3'" O N N 97 DA "C2'" C N N 98 DA "C1'" C N R 99 DA N9 N Y N 100 DA C8 C Y N 101 DA N7 N Y N 102 DA C5 C Y N 103 DA C6 C Y N 104 DA N6 N N N 105 DA N1 N Y N 106 DA C2 C Y N 107 DA N3 N Y N 108 DA C4 C Y N 109 DA HOP3 H N N 110 DA HOP2 H N N 111 DA "H5'" H N N 112 DA "H5''" H N N 113 DA "H4'" H N N 114 DA "H3'" H N N 115 DA "HO3'" H N N 116 DA "H2'" H N N 117 DA "H2''" H N N 118 DA "H1'" H N N 119 DA H8 H N N 120 DA H61 H N N 121 DA H62 H N N 122 DA H2 H N N 123 DC OP3 O N N 124 DC P P N N 125 DC OP1 O N N 126 DC OP2 O N N 127 DC "O5'" O N N 128 DC "C5'" C N N 129 DC "C4'" C N R 130 DC "O4'" O N N 131 DC "C3'" C N S 132 DC "O3'" O N N 133 DC "C2'" C N N 134 DC "C1'" C N R 135 DC N1 N N N 136 DC C2 C N N 137 DC O2 O N N 138 DC N3 N N N 139 DC C4 C N N 140 DC N4 N N N 141 DC C5 C N N 142 DC C6 C N N 143 DC HOP3 H N N 144 DC HOP2 H N N 145 DC "H5'" H N N 146 DC "H5''" H N N 147 DC "H4'" H N N 148 DC "H3'" H N N 149 DC "HO3'" H N N 150 DC "H2'" H N N 151 DC "H2''" H N N 152 DC "H1'" H N N 153 DC H41 H N N 154 DC H42 H N N 155 DC H5 H N N 156 DC H6 H N N 157 DG OP3 O N N 158 DG P P N N 159 DG OP1 O N N 160 DG OP2 O N N 161 DG "O5'" O N N 162 DG "C5'" C N N 163 DG "C4'" C N R 164 DG "O4'" O N N 165 DG "C3'" C N S 166 DG "O3'" O N N 167 DG "C2'" C N N 168 DG "C1'" C N R 169 DG N9 N Y N 170 DG C8 C Y N 171 DG N7 N Y N 172 DG C5 C Y N 173 DG C6 C N N 174 DG O6 O N N 175 DG N1 N N N 176 DG C2 C N N 177 DG N2 N N N 178 DG N3 N N N 179 DG C4 C Y N 180 DG HOP3 H N N 181 DG HOP2 H N N 182 DG "H5'" H N N 183 DG "H5''" H N N 184 DG "H4'" H N N 185 DG "H3'" H N N 186 DG "HO3'" H N N 187 DG "H2'" H N N 188 DG "H2''" H N N 189 DG "H1'" H N N 190 DG H8 H N N 191 DG H1 H N N 192 DG H21 H N N 193 DG H22 H N N 194 DT OP3 O N N 195 DT P P N N 196 DT OP1 O N N 197 DT OP2 O N N 198 DT "O5'" O N N 199 DT "C5'" C N N 200 DT "C4'" C N R 201 DT "O4'" O N N 202 DT "C3'" C N S 203 DT "O3'" O N N 204 DT "C2'" C N N 205 DT "C1'" C N R 206 DT N1 N N N 207 DT C2 C N N 208 DT O2 O N N 209 DT N3 N N N 210 DT C4 C N N 211 DT O4 O N N 212 DT C5 C N N 213 DT C7 C N N 214 DT C6 C N N 215 DT HOP3 H N N 216 DT HOP2 H N N 217 DT "H5'" H N N 218 DT "H5''" H N N 219 DT "H4'" H N N 220 DT "H3'" H N N 221 DT "HO3'" H N N 222 DT "H2'" H N N 223 DT "H2''" H N N 224 DT "H1'" H N N 225 DT H3 H N N 226 DT H71 H N N 227 DT H72 H N N 228 DT H73 H N N 229 DT H6 H N N 230 GLN N N N N 231 GLN CA C N S 232 GLN C C N N 233 GLN O O N N 234 GLN CB C N N 235 GLN CG C N N 236 GLN CD C N N 237 GLN OE1 O N N 238 GLN NE2 N N N 239 GLN OXT O N N 240 GLN H H N N 241 GLN H2 H N N 242 GLN HA H N N 243 GLN HB2 H N N 244 GLN HB3 H N N 245 GLN HG2 H N N 246 GLN HG3 H N N 247 GLN HE21 H N N 248 GLN HE22 H N N 249 GLN HXT H N N 250 GLU N N N N 251 GLU CA C N S 252 GLU C C N N 253 GLU O O N N 254 GLU CB C N N 255 GLU CG C N N 256 GLU CD C N N 257 GLU OE1 O N N 258 GLU OE2 O N N 259 GLU OXT O N N 260 GLU H H N N 261 GLU H2 H N N 262 GLU HA H N N 263 GLU HB2 H N N 264 GLU HB3 H N N 265 GLU HG2 H N N 266 GLU HG3 H N N 267 GLU HE2 H N N 268 GLU HXT H N N 269 GLY N N N N 270 GLY CA C N N 271 GLY C C N N 272 GLY O O N N 273 GLY OXT O N N 274 GLY H H N N 275 GLY H2 H N N 276 GLY HA2 H N N 277 GLY HA3 H N N 278 GLY HXT H N N 279 HIS N N N N 280 HIS CA C N S 281 HIS C C N N 282 HIS O O N N 283 HIS CB C N N 284 HIS CG C Y N 285 HIS ND1 N Y N 286 HIS CD2 C Y N 287 HIS CE1 C Y N 288 HIS NE2 N Y N 289 HIS OXT O N N 290 HIS H H N N 291 HIS H2 H N N 292 HIS HA H N N 293 HIS HB2 H N N 294 HIS HB3 H N N 295 HIS HD1 H N N 296 HIS HD2 H N N 297 HIS HE1 H N N 298 HIS HE2 H N N 299 HIS HXT H N N 300 HOH O O N N 301 HOH H1 H N N 302 HOH H2 H N N 303 ILE N N N N 304 ILE CA C N S 305 ILE C C N N 306 ILE O O N N 307 ILE CB C N S 308 ILE CG1 C N N 309 ILE CG2 C N N 310 ILE CD1 C N N 311 ILE OXT O N N 312 ILE H H N N 313 ILE H2 H N N 314 ILE HA H N N 315 ILE HB H N N 316 ILE HG12 H N N 317 ILE HG13 H N N 318 ILE HG21 H N N 319 ILE HG22 H N N 320 ILE HG23 H N N 321 ILE HD11 H N N 322 ILE HD12 H N N 323 ILE HD13 H N N 324 ILE HXT H N N 325 LEU N N N N 326 LEU CA C N S 327 LEU C C N N 328 LEU O O N N 329 LEU CB C N N 330 LEU CG C N N 331 LEU CD1 C N N 332 LEU CD2 C N N 333 LEU OXT O N N 334 LEU H H N N 335 LEU H2 H N N 336 LEU HA H N N 337 LEU HB2 H N N 338 LEU HB3 H N N 339 LEU HG H N N 340 LEU HD11 H N N 341 LEU HD12 H N N 342 LEU HD13 H N N 343 LEU HD21 H N N 344 LEU HD22 H N N 345 LEU HD23 H N N 346 LEU HXT H N N 347 LYS N N N N 348 LYS CA C N S 349 LYS C C N N 350 LYS O O N N 351 LYS CB C N N 352 LYS CG C N N 353 LYS CD C N N 354 LYS CE C N N 355 LYS NZ N N N 356 LYS OXT O N N 357 LYS H H N N 358 LYS H2 H N N 359 LYS HA H N N 360 LYS HB2 H N N 361 LYS HB3 H N N 362 LYS HG2 H N N 363 LYS HG3 H N N 364 LYS HD2 H N N 365 LYS HD3 H N N 366 LYS HE2 H N N 367 LYS HE3 H N N 368 LYS HZ1 H N N 369 LYS HZ2 H N N 370 LYS HZ3 H N N 371 LYS HXT H N N 372 MET N N N N 373 MET CA C N S 374 MET C C N N 375 MET O O N N 376 MET CB C N N 377 MET CG C N N 378 MET SD S N N 379 MET CE C N N 380 MET OXT O N N 381 MET H H N N 382 MET H2 H N N 383 MET HA H N N 384 MET HB2 H N N 385 MET HB3 H N N 386 MET HG2 H N N 387 MET HG3 H N N 388 MET HE1 H N N 389 MET HE2 H N N 390 MET HE3 H N N 391 MET HXT H N N 392 PHE N N N N 393 PHE CA C N S 394 PHE C C N N 395 PHE O O N N 396 PHE CB C N N 397 PHE CG C Y N 398 PHE CD1 C Y N 399 PHE CD2 C Y N 400 PHE CE1 C Y N 401 PHE CE2 C Y N 402 PHE CZ C Y N 403 PHE OXT O N N 404 PHE H H N N 405 PHE H2 H N N 406 PHE HA H N N 407 PHE HB2 H N N 408 PHE HB3 H N N 409 PHE HD1 H N N 410 PHE HD2 H N N 411 PHE HE1 H N N 412 PHE HE2 H N N 413 PHE HZ H N N 414 PHE HXT H N N 415 PRO N N N N 416 PRO CA C N S 417 PRO C C N N 418 PRO O O N N 419 PRO CB C N N 420 PRO CG C N N 421 PRO CD C N N 422 PRO OXT O N N 423 PRO H H N N 424 PRO HA H N N 425 PRO HB2 H N N 426 PRO HB3 H N N 427 PRO HG2 H N N 428 PRO HG3 H N N 429 PRO HD2 H N N 430 PRO HD3 H N N 431 PRO HXT H N N 432 SER N N N N 433 SER CA C N S 434 SER C C N N 435 SER O O N N 436 SER CB C N N 437 SER OG O N N 438 SER OXT O N N 439 SER H H N N 440 SER H2 H N N 441 SER HA H N N 442 SER HB2 H N N 443 SER HB3 H N N 444 SER HG H N N 445 SER HXT H N N 446 THR N N N N 447 THR CA C N S 448 THR C C N N 449 THR O O N N 450 THR CB C N R 451 THR OG1 O N N 452 THR CG2 C N N 453 THR OXT O N N 454 THR H H N N 455 THR H2 H N N 456 THR HA H N N 457 THR HB H N N 458 THR HG1 H N N 459 THR HG21 H N N 460 THR HG22 H N N 461 THR HG23 H N N 462 THR HXT H N N 463 TRP N N N N 464 TRP CA C N S 465 TRP C C N N 466 TRP O O N N 467 TRP CB C N N 468 TRP CG C Y N 469 TRP CD1 C Y N 470 TRP CD2 C Y N 471 TRP NE1 N Y N 472 TRP CE2 C Y N 473 TRP CE3 C Y N 474 TRP CZ2 C Y N 475 TRP CZ3 C Y N 476 TRP CH2 C Y N 477 TRP OXT O N N 478 TRP H H N N 479 TRP H2 H N N 480 TRP HA H N N 481 TRP HB2 H N N 482 TRP HB3 H N N 483 TRP HD1 H N N 484 TRP HE1 H N N 485 TRP HE3 H N N 486 TRP HZ2 H N N 487 TRP HZ3 H N N 488 TRP HH2 H N N 489 TRP HXT H N N 490 TYR N N N N 491 TYR CA C N S 492 TYR C C N N 493 TYR O O N N 494 TYR CB C N N 495 TYR CG C Y N 496 TYR CD1 C Y N 497 TYR CD2 C Y N 498 TYR CE1 C Y N 499 TYR CE2 C Y N 500 TYR CZ C Y N 501 TYR OH O N N 502 TYR OXT O N N 503 TYR H H N N 504 TYR H2 H N N 505 TYR HA H N N 506 TYR HB2 H N N 507 TYR HB3 H N N 508 TYR HD1 H N N 509 TYR HD2 H N N 510 TYR HE1 H N N 511 TYR HE2 H N N 512 TYR HH H N N 513 TYR HXT H N N 514 VAL N N N N 515 VAL CA C N S 516 VAL C C N N 517 VAL O O N N 518 VAL CB C N N 519 VAL CG1 C N N 520 VAL CG2 C N N 521 VAL OXT O N N 522 VAL H H N N 523 VAL H2 H N N 524 VAL HA H N N 525 VAL HB H N N 526 VAL HG11 H N N 527 VAL HG12 H N N 528 VAL HG13 H N N 529 VAL HG21 H N N 530 VAL HG22 H N N 531 VAL HG23 H N N 532 VAL HXT H N N 533 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 DA OP3 P sing N N 83 DA OP3 HOP3 sing N N 84 DA P OP1 doub N N 85 DA P OP2 sing N N 86 DA P "O5'" sing N N 87 DA OP2 HOP2 sing N N 88 DA "O5'" "C5'" sing N N 89 DA "C5'" "C4'" sing N N 90 DA "C5'" "H5'" sing N N 91 DA "C5'" "H5''" sing N N 92 DA "C4'" "O4'" sing N N 93 DA "C4'" "C3'" sing N N 94 DA "C4'" "H4'" sing N N 95 DA "O4'" "C1'" sing N N 96 DA "C3'" "O3'" sing N N 97 DA "C3'" "C2'" sing N N 98 DA "C3'" "H3'" sing N N 99 DA "O3'" "HO3'" sing N N 100 DA "C2'" "C1'" sing N N 101 DA "C2'" "H2'" sing N N 102 DA "C2'" "H2''" sing N N 103 DA "C1'" N9 sing N N 104 DA "C1'" "H1'" sing N N 105 DA N9 C8 sing Y N 106 DA N9 C4 sing Y N 107 DA C8 N7 doub Y N 108 DA C8 H8 sing N N 109 DA N7 C5 sing Y N 110 DA C5 C6 sing Y N 111 DA C5 C4 doub Y N 112 DA C6 N6 sing N N 113 DA C6 N1 doub Y N 114 DA N6 H61 sing N N 115 DA N6 H62 sing N N 116 DA N1 C2 sing Y N 117 DA C2 N3 doub Y N 118 DA C2 H2 sing N N 119 DA N3 C4 sing Y N 120 DC OP3 P sing N N 121 DC OP3 HOP3 sing N N 122 DC P OP1 doub N N 123 DC P OP2 sing N N 124 DC P "O5'" sing N N 125 DC OP2 HOP2 sing N N 126 DC "O5'" "C5'" sing N N 127 DC "C5'" "C4'" sing N N 128 DC "C5'" "H5'" sing N N 129 DC "C5'" "H5''" sing N N 130 DC "C4'" "O4'" sing N N 131 DC "C4'" "C3'" sing N N 132 DC "C4'" "H4'" sing N N 133 DC "O4'" "C1'" sing N N 134 DC "C3'" "O3'" sing N N 135 DC "C3'" "C2'" sing N N 136 DC "C3'" "H3'" sing N N 137 DC "O3'" "HO3'" sing N N 138 DC "C2'" "C1'" sing N N 139 DC "C2'" "H2'" sing N N 140 DC "C2'" "H2''" sing N N 141 DC "C1'" N1 sing N N 142 DC "C1'" "H1'" sing N N 143 DC N1 C2 sing N N 144 DC N1 C6 sing N N 145 DC C2 O2 doub N N 146 DC C2 N3 sing N N 147 DC N3 C4 doub N N 148 DC C4 N4 sing N N 149 DC C4 C5 sing N N 150 DC N4 H41 sing N N 151 DC N4 H42 sing N N 152 DC C5 C6 doub N N 153 DC C5 H5 sing N N 154 DC C6 H6 sing N N 155 DG OP3 P sing N N 156 DG OP3 HOP3 sing N N 157 DG P OP1 doub N N 158 DG P OP2 sing N N 159 DG P "O5'" sing N N 160 DG OP2 HOP2 sing N N 161 DG "O5'" "C5'" sing N N 162 DG "C5'" "C4'" sing N N 163 DG "C5'" "H5'" sing N N 164 DG "C5'" "H5''" sing N N 165 DG "C4'" "O4'" sing N N 166 DG "C4'" "C3'" sing N N 167 DG "C4'" "H4'" sing N N 168 DG "O4'" "C1'" sing N N 169 DG "C3'" "O3'" sing N N 170 DG "C3'" "C2'" sing N N 171 DG "C3'" "H3'" sing N N 172 DG "O3'" "HO3'" sing N N 173 DG "C2'" "C1'" sing N N 174 DG "C2'" "H2'" sing N N 175 DG "C2'" "H2''" sing N N 176 DG "C1'" N9 sing N N 177 DG "C1'" "H1'" sing N N 178 DG N9 C8 sing Y N 179 DG N9 C4 sing Y N 180 DG C8 N7 doub Y N 181 DG C8 H8 sing N N 182 DG N7 C5 sing Y N 183 DG C5 C6 sing N N 184 DG C5 C4 doub Y N 185 DG C6 O6 doub N N 186 DG C6 N1 sing N N 187 DG N1 C2 sing N N 188 DG N1 H1 sing N N 189 DG C2 N2 sing N N 190 DG C2 N3 doub N N 191 DG N2 H21 sing N N 192 DG N2 H22 sing N N 193 DG N3 C4 sing N N 194 DT OP3 P sing N N 195 DT OP3 HOP3 sing N N 196 DT P OP1 doub N N 197 DT P OP2 sing N N 198 DT P "O5'" sing N N 199 DT OP2 HOP2 sing N N 200 DT "O5'" "C5'" sing N N 201 DT "C5'" "C4'" sing N N 202 DT "C5'" "H5'" sing N N 203 DT "C5'" "H5''" sing N N 204 DT "C4'" "O4'" sing N N 205 DT "C4'" "C3'" sing N N 206 DT "C4'" "H4'" sing N N 207 DT "O4'" "C1'" sing N N 208 DT "C3'" "O3'" sing N N 209 DT "C3'" "C2'" sing N N 210 DT "C3'" "H3'" sing N N 211 DT "O3'" "HO3'" sing N N 212 DT "C2'" "C1'" sing N N 213 DT "C2'" "H2'" sing N N 214 DT "C2'" "H2''" sing N N 215 DT "C1'" N1 sing N N 216 DT "C1'" "H1'" sing N N 217 DT N1 C2 sing N N 218 DT N1 C6 sing N N 219 DT C2 O2 doub N N 220 DT C2 N3 sing N N 221 DT N3 C4 sing N N 222 DT N3 H3 sing N N 223 DT C4 O4 doub N N 224 DT C4 C5 sing N N 225 DT C5 C7 sing N N 226 DT C5 C6 doub N N 227 DT C7 H71 sing N N 228 DT C7 H72 sing N N 229 DT C7 H73 sing N N 230 DT C6 H6 sing N N 231 GLN N CA sing N N 232 GLN N H sing N N 233 GLN N H2 sing N N 234 GLN CA C sing N N 235 GLN CA CB sing N N 236 GLN CA HA sing N N 237 GLN C O doub N N 238 GLN C OXT sing N N 239 GLN CB CG sing N N 240 GLN CB HB2 sing N N 241 GLN CB HB3 sing N N 242 GLN CG CD sing N N 243 GLN CG HG2 sing N N 244 GLN CG HG3 sing N N 245 GLN CD OE1 doub N N 246 GLN CD NE2 sing N N 247 GLN NE2 HE21 sing N N 248 GLN NE2 HE22 sing N N 249 GLN OXT HXT sing N N 250 GLU N CA sing N N 251 GLU N H sing N N 252 GLU N H2 sing N N 253 GLU CA C sing N N 254 GLU CA CB sing N N 255 GLU CA HA sing N N 256 GLU C O doub N N 257 GLU C OXT sing N N 258 GLU CB CG sing N N 259 GLU CB HB2 sing N N 260 GLU CB HB3 sing N N 261 GLU CG CD sing N N 262 GLU CG HG2 sing N N 263 GLU CG HG3 sing N N 264 GLU CD OE1 doub N N 265 GLU CD OE2 sing N N 266 GLU OE2 HE2 sing N N 267 GLU OXT HXT sing N N 268 GLY N CA sing N N 269 GLY N H sing N N 270 GLY N H2 sing N N 271 GLY CA C sing N N 272 GLY CA HA2 sing N N 273 GLY CA HA3 sing N N 274 GLY C O doub N N 275 GLY C OXT sing N N 276 GLY OXT HXT sing N N 277 HIS N CA sing N N 278 HIS N H sing N N 279 HIS N H2 sing N N 280 HIS CA C sing N N 281 HIS CA CB sing N N 282 HIS CA HA sing N N 283 HIS C O doub N N 284 HIS C OXT sing N N 285 HIS CB CG sing N N 286 HIS CB HB2 sing N N 287 HIS CB HB3 sing N N 288 HIS CG ND1 sing Y N 289 HIS CG CD2 doub Y N 290 HIS ND1 CE1 doub Y N 291 HIS ND1 HD1 sing N N 292 HIS CD2 NE2 sing Y N 293 HIS CD2 HD2 sing N N 294 HIS CE1 NE2 sing Y N 295 HIS CE1 HE1 sing N N 296 HIS NE2 HE2 sing N N 297 HIS OXT HXT sing N N 298 HOH O H1 sing N N 299 HOH O H2 sing N N 300 ILE N CA sing N N 301 ILE N H sing N N 302 ILE N H2 sing N N 303 ILE CA C sing N N 304 ILE CA CB sing N N 305 ILE CA HA sing N N 306 ILE C O doub N N 307 ILE C OXT sing N N 308 ILE CB CG1 sing N N 309 ILE CB CG2 sing N N 310 ILE CB HB sing N N 311 ILE CG1 CD1 sing N N 312 ILE CG1 HG12 sing N N 313 ILE CG1 HG13 sing N N 314 ILE CG2 HG21 sing N N 315 ILE CG2 HG22 sing N N 316 ILE CG2 HG23 sing N N 317 ILE CD1 HD11 sing N N 318 ILE CD1 HD12 sing N N 319 ILE CD1 HD13 sing N N 320 ILE OXT HXT sing N N 321 LEU N CA sing N N 322 LEU N H sing N N 323 LEU N H2 sing N N 324 LEU CA C sing N N 325 LEU CA CB sing N N 326 LEU CA HA sing N N 327 LEU C O doub N N 328 LEU C OXT sing N N 329 LEU CB CG sing N N 330 LEU CB HB2 sing N N 331 LEU CB HB3 sing N N 332 LEU CG CD1 sing N N 333 LEU CG CD2 sing N N 334 LEU CG HG sing N N 335 LEU CD1 HD11 sing N N 336 LEU CD1 HD12 sing N N 337 LEU CD1 HD13 sing N N 338 LEU CD2 HD21 sing N N 339 LEU CD2 HD22 sing N N 340 LEU CD2 HD23 sing N N 341 LEU OXT HXT sing N N 342 LYS N CA sing N N 343 LYS N H sing N N 344 LYS N H2 sing N N 345 LYS CA C sing N N 346 LYS CA CB sing N N 347 LYS CA HA sing N N 348 LYS C O doub N N 349 LYS C OXT sing N N 350 LYS CB CG sing N N 351 LYS CB HB2 sing N N 352 LYS CB HB3 sing N N 353 LYS CG CD sing N N 354 LYS CG HG2 sing N N 355 LYS CG HG3 sing N N 356 LYS CD CE sing N N 357 LYS CD HD2 sing N N 358 LYS CD HD3 sing N N 359 LYS CE NZ sing N N 360 LYS CE HE2 sing N N 361 LYS CE HE3 sing N N 362 LYS NZ HZ1 sing N N 363 LYS NZ HZ2 sing N N 364 LYS NZ HZ3 sing N N 365 LYS OXT HXT sing N N 366 MET N CA sing N N 367 MET N H sing N N 368 MET N H2 sing N N 369 MET CA C sing N N 370 MET CA CB sing N N 371 MET CA HA sing N N 372 MET C O doub N N 373 MET C OXT sing N N 374 MET CB CG sing N N 375 MET CB HB2 sing N N 376 MET CB HB3 sing N N 377 MET CG SD sing N N 378 MET CG HG2 sing N N 379 MET CG HG3 sing N N 380 MET SD CE sing N N 381 MET CE HE1 sing N N 382 MET CE HE2 sing N N 383 MET CE HE3 sing N N 384 MET OXT HXT sing N N 385 PHE N CA sing N N 386 PHE N H sing N N 387 PHE N H2 sing N N 388 PHE CA C sing N N 389 PHE CA CB sing N N 390 PHE CA HA sing N N 391 PHE C O doub N N 392 PHE C OXT sing N N 393 PHE CB CG sing N N 394 PHE CB HB2 sing N N 395 PHE CB HB3 sing N N 396 PHE CG CD1 doub Y N 397 PHE CG CD2 sing Y N 398 PHE CD1 CE1 sing Y N 399 PHE CD1 HD1 sing N N 400 PHE CD2 CE2 doub Y N 401 PHE CD2 HD2 sing N N 402 PHE CE1 CZ doub Y N 403 PHE CE1 HE1 sing N N 404 PHE CE2 CZ sing Y N 405 PHE CE2 HE2 sing N N 406 PHE CZ HZ sing N N 407 PHE OXT HXT sing N N 408 PRO N CA sing N N 409 PRO N CD sing N N 410 PRO N H sing N N 411 PRO CA C sing N N 412 PRO CA CB sing N N 413 PRO CA HA sing N N 414 PRO C O doub N N 415 PRO C OXT sing N N 416 PRO CB CG sing N N 417 PRO CB HB2 sing N N 418 PRO CB HB3 sing N N 419 PRO CG CD sing N N 420 PRO CG HG2 sing N N 421 PRO CG HG3 sing N N 422 PRO CD HD2 sing N N 423 PRO CD HD3 sing N N 424 PRO OXT HXT sing N N 425 SER N CA sing N N 426 SER N H sing N N 427 SER N H2 sing N N 428 SER CA C sing N N 429 SER CA CB sing N N 430 SER CA HA sing N N 431 SER C O doub N N 432 SER C OXT sing N N 433 SER CB OG sing N N 434 SER CB HB2 sing N N 435 SER CB HB3 sing N N 436 SER OG HG sing N N 437 SER OXT HXT sing N N 438 THR N CA sing N N 439 THR N H sing N N 440 THR N H2 sing N N 441 THR CA C sing N N 442 THR CA CB sing N N 443 THR CA HA sing N N 444 THR C O doub N N 445 THR C OXT sing N N 446 THR CB OG1 sing N N 447 THR CB CG2 sing N N 448 THR CB HB sing N N 449 THR OG1 HG1 sing N N 450 THR CG2 HG21 sing N N 451 THR CG2 HG22 sing N N 452 THR CG2 HG23 sing N N 453 THR OXT HXT sing N N 454 TRP N CA sing N N 455 TRP N H sing N N 456 TRP N H2 sing N N 457 TRP CA C sing N N 458 TRP CA CB sing N N 459 TRP CA HA sing N N 460 TRP C O doub N N 461 TRP C OXT sing N N 462 TRP CB CG sing N N 463 TRP CB HB2 sing N N 464 TRP CB HB3 sing N N 465 TRP CG CD1 doub Y N 466 TRP CG CD2 sing Y N 467 TRP CD1 NE1 sing Y N 468 TRP CD1 HD1 sing N N 469 TRP CD2 CE2 doub Y N 470 TRP CD2 CE3 sing Y N 471 TRP NE1 CE2 sing Y N 472 TRP NE1 HE1 sing N N 473 TRP CE2 CZ2 sing Y N 474 TRP CE3 CZ3 doub Y N 475 TRP CE3 HE3 sing N N 476 TRP CZ2 CH2 doub Y N 477 TRP CZ2 HZ2 sing N N 478 TRP CZ3 CH2 sing Y N 479 TRP CZ3 HZ3 sing N N 480 TRP CH2 HH2 sing N N 481 TRP OXT HXT sing N N 482 TYR N CA sing N N 483 TYR N H sing N N 484 TYR N H2 sing N N 485 TYR CA C sing N N 486 TYR CA CB sing N N 487 TYR CA HA sing N N 488 TYR C O doub N N 489 TYR C OXT sing N N 490 TYR CB CG sing N N 491 TYR CB HB2 sing N N 492 TYR CB HB3 sing N N 493 TYR CG CD1 doub Y N 494 TYR CG CD2 sing Y N 495 TYR CD1 CE1 sing Y N 496 TYR CD1 HD1 sing N N 497 TYR CD2 CE2 doub Y N 498 TYR CD2 HD2 sing N N 499 TYR CE1 CZ doub Y N 500 TYR CE1 HE1 sing N N 501 TYR CE2 CZ sing Y N 502 TYR CE2 HE2 sing N N 503 TYR CZ OH sing N N 504 TYR OH HH sing N N 505 TYR OXT HXT sing N N 506 VAL N CA sing N N 507 VAL N H sing N N 508 VAL N H2 sing N N 509 VAL CA C sing N N 510 VAL CA CB sing N N 511 VAL CA HA sing N N 512 VAL C O doub N N 513 VAL C OXT sing N N 514 VAL CB CG1 sing N N 515 VAL CB CG2 sing N N 516 VAL CB HB sing N N 517 VAL CG1 HG11 sing N N 518 VAL CG1 HG12 sing N N 519 VAL CG1 HG13 sing N N 520 VAL CG2 HG21 sing N N 521 VAL CG2 HG22 sing N N 522 VAL CG2 HG23 sing N N 523 VAL OXT HXT sing N N 524 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4HLY 'double helix' 4HLY 'b-form double helix' 4HLY 'mismatched base pair' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DG 1 1_555 D DC 12 1_555 -0.407 -0.001 0.297 12.647 -5.462 0.984 1 C_DG1:DC12_D C 1 ? D 12 ? 19 1 1 C DC 2 1_555 D DG 11 1_555 0.008 -0.190 0.079 4.272 -9.256 -2.294 2 C_DC2:DG11_D C 2 ? D 11 ? 19 1 1 C DG 3 1_555 D DC 10 1_555 -0.391 -0.128 -0.040 -10.747 -7.854 2.843 3 C_DG3:DC10_D C 3 ? D 10 ? 19 1 1 C DT 4 1_555 D DA 9 1_555 -0.208 -0.092 0.135 -4.363 -6.585 -2.218 4 C_DT4:DA9_D C 4 ? D 9 ? 20 1 1 C DC 5 1_555 D DG 8 1_555 0.334 -0.035 -0.064 2.560 -4.176 0.158 5 C_DC5:DG8_D C 5 ? D 8 ? 19 1 1 C DG 6 1_555 D DA 7 1_555 6.530 -4.216 0.571 27.371 0.614 5.863 6 C_DG6:DA7_D C 6 ? D 7 ? 11 9 1 C DA 7 1_555 D DG 6 1_555 -6.504 -4.301 0.634 -26.316 3.150 5.185 7 C_DA7:DG6_D C 7 ? D 6 ? 11 9 1 C DG 8 1_555 D DC 5 1_555 -0.207 -0.159 -0.396 1.108 6.706 -2.072 8 C_DG8:DC5_D C 8 ? D 5 ? 19 1 1 C DA 9 1_555 D DT 4 1_555 0.197 -0.108 0.624 19.398 -10.713 -2.106 9 C_DA9:DT4_D C 9 ? D 4 ? 20 1 1 C DC 10 1_555 D DG 3 1_555 0.568 -0.285 0.342 5.760 -14.299 0.848 10 C_DC10:DG3_D C 10 ? D 3 ? 19 1 1 C DG 11 1_555 D DC 2 1_555 -0.264 -0.299 -0.378 -5.467 -0.413 -3.590 11 C_DG11:DC2_D C 11 ? D 2 ? 19 1 1 C DC 12 1_555 D DG 1 1_555 0.152 -0.260 -0.200 7.711 -1.773 -0.801 12 C_DC12:DG1_D C 12 ? D 1 ? 19 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DG 1 1_555 D DC 12 1_555 C DC 2 1_555 D DG 11 1_555 -0.705 -0.468 3.498 0.124 -4.370 37.267 -0.112 1.114 3.526 -6.810 -0.194 37.514 1 CC_DG1DC2:DG11DC12_DD C 1 ? D 12 ? C 2 ? D 11 ? 1 C DC 2 1_555 D DG 11 1_555 C DG 3 1_555 D DC 10 1_555 0.370 0.059 3.576 -0.816 5.632 42.489 -0.533 -0.596 3.548 7.730 1.120 42.851 2 CC_DC2DG3:DC10DG11_DD C 2 ? D 11 ? C 3 ? D 10 ? 1 C DG 3 1_555 D DC 10 1_555 C DT 4 1_555 D DA 9 1_555 -0.926 -0.591 3.121 -2.152 2.931 28.944 -1.784 1.390 3.107 5.836 4.284 29.166 3 CC_DG3DT4:DA9DC10_DD C 3 ? D 10 ? C 4 ? D 9 ? 1 C DT 4 1_555 D DA 9 1_555 C DC 5 1_555 D DG 8 1_555 0.960 -0.069 3.115 1.920 1.479 35.407 -0.320 -1.306 3.155 2.428 -3.153 35.487 4 CC_DT4DC5:DG8DA9_DD C 4 ? D 9 ? C 5 ? D 8 ? 1 C DC 5 1_555 D DG 8 1_555 C DG 6 1_555 D DA 7 1_555 0.712 1.804 3.116 -1.688 8.738 59.722 1.373 -0.790 3.307 8.722 1.685 60.320 5 CC_DC5DG6:DA7DG8_DD C 5 ? D 8 ? C 6 ? D 7 ? 1 C DG 6 1_555 D DA 7 1_555 C DA 7 1_555 D DG 6 1_555 0.141 -1.779 4.639 2.544 0.674 -5.378 11.961 20.510 4.308 -6.678 25.220 -5.987 6 CC_DG6DA7:DG6DA7_DD C 6 ? D 7 ? C 7 ? D 6 ? 1 C DA 7 1_555 D DG 6 1_555 C DG 8 1_555 D DC 5 1_555 -0.279 1.494 2.934 2.257 7.558 56.711 1.178 0.406 3.082 7.914 -2.363 57.212 7 CC_DA7DG8:DC5DG6_DD C 7 ? D 6 ? C 8 ? D 5 ? 1 C DG 8 1_555 D DC 5 1_555 C DA 9 1_555 D DT 4 1_555 -0.804 0.063 3.091 -11.114 3.654 34.548 -0.400 -0.237 3.181 5.945 18.084 36.418 8 CC_DG8DA9:DT4DC5_DD C 8 ? D 5 ? C 9 ? D 4 ? 1 C DA 9 1_555 D DT 4 1_555 C DC 10 1_555 D DG 3 1_555 0.499 -1.267 3.661 1.294 -1.039 36.051 -1.879 -0.599 3.710 -1.678 -2.090 36.088 9 CC_DA9DC10:DG3DT4_DD C 9 ? D 4 ? C 10 ? D 3 ? 1 C DC 10 1_555 D DG 3 1_555 C DG 11 1_555 D DC 2 1_555 -0.315 -0.313 3.494 8.419 7.663 35.412 -1.566 1.675 3.205 12.214 -13.420 37.141 10 CC_DC10DG11:DC2DG3_DD C 10 ? D 3 ? C 11 ? D 2 ? 1 C DG 11 1_555 D DC 2 1_555 C DC 12 1_555 D DG 1 1_555 -0.123 -0.382 3.060 -1.824 5.382 24.959 -2.275 -0.202 2.915 12.252 4.152 25.588 11 CC_DG11DC12:DG1DC2_DD C 11 ? D 2 ? C 12 ? D 1 ? # loop_ _pdbx_reflns_twin.domain_id _pdbx_reflns_twin.crystal_id _pdbx_reflns_twin.diffrn_id _pdbx_reflns_twin.type _pdbx_reflns_twin.operator _pdbx_reflns_twin.fraction 1 1 1 ? 'H, K, L' 0.598 2 1 1 ? 'K, H, -L' 0.402 # _atom_sites.entry_id 4HLY _atom_sites.fract_transf_matrix[1][1] 0.025950 _atom_sites.fract_transf_matrix[1][2] -0.013149 _atom_sites.fract_transf_matrix[1][3] -0.001206 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029060 _atom_sites.fract_transf_matrix[2][3] 0.001143 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.020615 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_