HEADER HYDROLASE 18-OCT-12 4HME TITLE CRYSTAL STRUCTURE OF COLD-ADAPTED CHITINASE FROM MORITELLA MARINA WITH TITLE 2 A REACTION PRODUCT - NAG2 COMPND MOL_ID: 1; COMPND 2 MOLECULE: CHITINASE 60; COMPND 3 CHAIN: A; COMPND 4 EC: 3.2.1.14; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: VIBRIO MARINUS; SOURCE 3 ORGANISM_COMMON: MORITELLA MARINA; SOURCE 4 ORGANISM_TAXID: 90736; SOURCE 5 GENE: CHI60; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 9 EXPRESSION_SYSTEM_PLASMID: PET-11A KEYWDS CHITINASE, HYDROLAZE, TIM-BARREL, IG-LIKE, IMMUNOGLOBULIN LIKE KEYWDS 2 DOMAIN, CHBD, CHITIN BINDING DOMAIN, HYDROLASE EXPDTA X-RAY DIFFRACTION AUTHOR P.H.MALECKI,C.E.VORGIAS,J.E.RACZYNSKA,W.RYPNIEWSKI REVDAT 6 16-OCT-24 4HME 1 REMARK REVDAT 5 08-NOV-23 4HME 1 REMARK REVDAT 4 10-MAY-23 4HME 1 REMARK HETSYN REVDAT 3 29-JUL-20 4HME 1 COMPND REMARK HETNAM LINK REVDAT 3 2 1 SITE ATOM REVDAT 2 15-MAY-13 4HME 1 JRNL REVDAT 1 01-MAY-13 4HME 0 JRNL AUTH P.H.MALECKI,J.E.RACZYNSKA,C.E.VORGIAS,W.RYPNIEWSKI JRNL TITL STRUCTURE OF A COMPLETE FOUR-DOMAIN CHITINASE FROM MORITELLA JRNL TITL 2 MARINA, A MARINE PSYCHROPHILIC BACTERIUM JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 821 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 23633591 JRNL DOI 10.1107/S0907444913002011 REMARK 2 REMARK 2 RESOLUTION. 2.07 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : ENGH & HUBER REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.07 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 34.32 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 39524 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.213 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 2.600 REMARK 3 FREE R VALUE TEST SET COUNT : 1015 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.07 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.12 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2626 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 96.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.2740 REMARK 3 BIN FREE R VALUE SET COUNT : 51 REMARK 3 BIN FREE R VALUE : 0.4160 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 4137 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 292 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 40.44 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.36000 REMARK 3 B22 (A**2) : 0.36000 REMARK 3 B33 (A**2) : -0.54000 REMARK 3 B12 (A**2) : 0.18000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.170 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.152 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.121 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 9.013 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.967 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.956 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 4299 ; 0.020 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 2725 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5875 ; 1.850 ; 1.920 REMARK 3 BOND ANGLES OTHERS (DEGREES): 6666 ; 1.046 ; 3.001 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 529 ; 6.227 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 214 ;39.008 ;25.654 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 647 ;15.073 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 13 ;16.458 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 658 ; 0.120 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4862 ; 0.009 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 851 ; 0.001 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 23 A 349 REMARK 3 ORIGIN FOR THE GROUP (A): 1.4089 24.2711 23.0550 REMARK 3 T TENSOR REMARK 3 T11: 0.0764 T22: 0.0386 REMARK 3 T33: 0.0946 T12: -0.0359 REMARK 3 T13: 0.0337 T23: -0.0201 REMARK 3 L TENSOR REMARK 3 L11: 0.9130 L22: 0.5548 REMARK 3 L33: 1.1577 L12: -0.2329 REMARK 3 L13: 0.0000 L23: -0.1518 REMARK 3 S TENSOR REMARK 3 S11: -0.0394 S12: -0.0737 S13: -0.0330 REMARK 3 S21: 0.0913 S22: 0.0235 S23: 0.0677 REMARK 3 S31: -0.0655 S32: -0.0582 S33: 0.0160 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 350 A 501 REMARK 3 ORIGIN FOR THE GROUP (A): -19.0961 -1.4726 59.2488 REMARK 3 T TENSOR REMARK 3 T11: 0.2316 T22: 0.1005 REMARK 3 T33: 0.1923 T12: -0.0675 REMARK 3 T13: 0.0601 T23: -0.0292 REMARK 3 L TENSOR REMARK 3 L11: 0.6568 L22: 0.1425 REMARK 3 L33: 3.6831 L12: 0.2144 REMARK 3 L13: -1.2081 L23: -0.1588 REMARK 3 S TENSOR REMARK 3 S11: -0.2054 S12: 0.0668 S13: -0.1540 REMARK 3 S21: -0.1045 S22: 0.0847 S23: -0.1206 REMARK 3 S31: 0.1227 S32: -0.0275 S33: 0.1207 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 502 A 550 REMARK 3 ORIGIN FOR THE GROUP (A): -26.9547 21.7046 114.1248 REMARK 3 T TENSOR REMARK 3 T11: 0.1231 T22: 0.1018 REMARK 3 T33: 0.1634 T12: 0.0160 REMARK 3 T13: -0.0007 T23: 0.0022 REMARK 3 L TENSOR REMARK 3 L11: 4.1976 L22: 3.0843 REMARK 3 L33: 9.7359 L12: -1.7008 REMARK 3 L13: 4.7123 L23: 0.3970 REMARK 3 S TENSOR REMARK 3 S11: -0.2225 S12: -0.0272 S13: 0.4098 REMARK 3 S21: 0.0442 S22: -0.1746 S23: 0.0823 REMARK 3 S31: -0.5741 S32: -0.0204 S33: 0.3971 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4HME COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 26-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075647. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-MAR-11 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5.5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : BESSY REMARK 200 BEAMLINE : 14.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.91841 REMARK 200 MONOCHROMATOR : DOUBLE-CRYSTAL REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : RAYONIX MX-225 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 39600 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.070 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 9.100 REMARK 200 R MERGE (I) : 0.11400 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 7.5000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.07 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.14 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.1 REMARK 200 DATA REDUNDANCY IN SHELL : 7.30 REMARK 200 R MERGE FOR SHELL (I) : 0.94000 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: PDB ENTRY 4HMC REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 55.47 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.76 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 23% PEG 4000 W/V, 0.16M AMMONIUM REMARK 280 SULPHATE, 0.1M CITRATE BUFFER, PH 5.5, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 31 1 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z+1/3 REMARK 290 3555 -X+Y,-X,Z+2/3 REMARK 290 4555 -Y,-X,-Z+2/3 REMARK 290 5555 -X+Y,Y,-Z+1/3 REMARK 290 6555 X,X-Y,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 85.84567 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 171.69133 REMARK 290 SMTRY1 4 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 171.69133 REMARK 290 SMTRY1 5 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 85.84567 REMARK 290 SMTRY1 6 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: AUTHOR DETERMINED BIOLOGICAL UNIT: UNKNOWN. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7320 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 45330 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -16.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 2 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 85.84567 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 30 -165.58 -103.84 REMARK 500 ASN A 39 47.94 -81.07 REMARK 500 GLN A 154 -126.75 50.72 REMARK 500 LYS A 160 -118.68 26.69 REMARK 500 ALA A 189 58.36 -117.28 REMARK 500 PHE A 219 51.86 -97.78 REMARK 500 ILE A 431 79.39 -103.23 REMARK 500 ASP A 487 21.64 48.79 REMARK 500 ASP A 519 -5.42 77.27 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 NA A 603 NA REMARK 620 N RES CSSEQI ATOM REMARK 620 1 THR A 24 O REMARK 620 2 ASN A 105 OD1 87.0 REMARK 620 3 GLY A 144 O 160.6 100.9 REMARK 620 4 ASP A 146 OD1 82.3 108.6 111.3 REMARK 620 5 HOH A 968 O 75.5 131.3 86.1 113.3 REMARK 620 N 1 2 3 4 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HMC RELATED DB: PDB REMARK 900 RELATED ID: 4HMD RELATED DB: PDB REMARK 999 REMARK 999 SEQUENCE REMARK 999 THE SEQUENCE DISCREPANCIES (R452H, A470T) WERE NOT INTENTIONAL REMARK 999 MUTATIONS, AND COULD BE THE CORRECT SEQUENCE OF THE NATIVE GENE. DBREF 4HME A 23 550 UNP B1VBB0 B1VBB0_VIBMA 23 550 SEQADV 4HME HIS A 452 UNP B1VBB0 ARG 452 SEE REMARK 999 SEQADV 4HME THR A 470 UNP B1VBB0 ALA 470 SEE REMARK 999 SEQRES 1 A 528 GLY THR ILE THR SER GLN ASP ASP ASN VAL VAL VAL GLY SEQRES 2 A 528 TYR TRP HIS ASN TRP CYS ASP GLY ARG GLY TYR GLN GLY SEQRES 3 A 528 GLY ASN ALA PRO CYS VAL GLU LEU LYS THR VAL ASN PRO SEQRES 4 A 528 GLN TYR ASN VAL VAL ASN ILE SER PHE MET LYS VAL TYR SEQRES 5 A 528 ASP ILE ALA GLU GLY ARG ILE PRO THR PHE LYS LEU ASP SEQRES 6 A 528 PRO THR ILE ALA LEU SER GLU ALA GLU PHE ILE ALA GLN SEQRES 7 A 528 ILE ASP THR LEU ASN SER GLN GLY ARG SER VAL LEU ILE SEQRES 8 A 528 ALA LEU GLY GLY ALA ASP ALA HIS ILE GLU LEU THR ARG SEQRES 9 A 528 GLY ASP GLU ASP ALA LEU ALA ALA GLU ILE ILE ARG LEU SEQRES 10 A 528 THR ASP LEU TYR GLY PHE ASP GLY LEU ASP ILE ASP LEU SEQRES 11 A 528 GLU GLN ALA ALA ILE THR ALA LYS ASP ASN GLN PHE VAL SEQRES 12 A 528 ILE PRO ALA ALA LEU LYS MET VAL LYS GLU HIS TYR ARG SEQRES 13 A 528 LYS THR GLY ASP ASN PHE MET ILE THR MET ALA PRO GLU SEQRES 14 A 528 PHE PRO TYR LEU THR ALA ASN GLY ALA TYR THR PRO TYR SEQRES 15 A 528 LEU THR GLU LEU ASP GLY TYR TYR ASP PHE ILE ASN PRO SEQRES 16 A 528 GLN PHE TYR ASN GLN GLY GLY ASP GLY LEU TRP ILE GLU SEQRES 17 A 528 GLY VAL GLY TRP ILE ALA GLN ASN ASN ASP ALA LEU LYS SEQRES 18 A 528 GLU GLU PHE ILE TYR TYR ILE ALA ASP SER LEU ILE ASN SEQRES 19 A 528 GLY THR ARG ASN TYR HIS LYS ILE PRO HIS ASP LYS LEU SEQRES 20 A 528 VAL PHE GLY LEU PRO SER ASN ILE ASP ALA ALA ALA THR SEQRES 21 A 528 GLY TYR ILE GLN ASP PRO GLN ASP LEU TYR LYS ALA PHE SEQRES 22 A 528 ASP ARG LEU LYS ALA GLN GLY GLN PRO LEU ARG GLY VAL SEQRES 23 A 528 MET THR TRP SER VAL ASN TRP ASP MET GLY THR ASP ALA SEQRES 24 A 528 ALA ASN ASN SER TYR ASN GLN GLN PHE ILE LYS ASP TYR SEQRES 25 A 528 GLY ASN PHE ILE HIS ASN GLN LEU PRO PRO VAL THR ASP SEQRES 26 A 528 MET THR PRO THR LEU SER GLY ILE VAL ASP THR ARG VAL SEQRES 27 A 528 GLU LEU ASP SER HIS PHE ASP PRO LEU ILE GLY ILE THR SEQRES 28 A 528 ALA LYS ASP TYR GLN GLY ASN ASP ILE THR ALA ASP VAL SEQRES 29 A 528 THR VAL SER GLY SER VAL ASN THR ASN GLN VAL GLY ASP SEQRES 30 A 528 TYR LEU LEU THR TYR SER VAL SER SER ASP ASP GLU THR SEQRES 31 A 528 THR ASN GLN PRO ARG LYS ILE THR VAL TYR GLU ILE LEU SEQRES 32 A 528 PRO ALA PHE THR GLY ILE THR ASP THR THR VAL VAL ILE SEQRES 33 A 528 ASP SER GLU PHE ASP PRO MET GLN GLY VAL SER ALA SER SEQRES 34 A 528 HIS PRO THR GLN GLY ASP LEU THR ALA ASN ILE THR VAL SEQRES 35 A 528 THR GLY GLU VAL ASP THR ASN VAL VAL GLY VAL TYR GLU SEQRES 36 A 528 LEU THR TYR GLN LEU PHE TYR GLY GLN ASP ASN GLN GLN SEQRES 37 A 528 ASN MET THR ASP LYS ARG ILE VAL THR VAL VAL THR ASP SEQRES 38 A 528 ALA VAL SER ASP ASP ASP TRP GLN VAL GLY SER THR TYR SEQRES 39 A 528 VAL LYS ASP ASP LYS VAL THR HIS ASN GLY ALA THR TRP SEQRES 40 A 528 THR ALA GLN TRP TRP THR LYS GLY GLU GLU PRO GLY THR SEQRES 41 A 528 THR GLY GLU TRP GLY VAL TRP ARG HET NAG B 1 15 HET NAG B 2 14 HET NA A 603 1 HET GOL A 604 6 HET GOL A 605 6 HET GOL A 606 6 HET GOL A 607 6 HETNAM NAG 2-ACETAMIDO-2-DEOXY-BETA-D-GLUCOPYRANOSE HETNAM NA SODIUM ION HETNAM GOL GLYCEROL HETSYN NAG N-ACETYL-BETA-D-GLUCOSAMINE; 2-ACETAMIDO-2-DEOXY-BETA- HETSYN 2 NAG D-GLUCOSE; 2-ACETAMIDO-2-DEOXY-D-GLUCOSE; 2-ACETAMIDO- HETSYN 3 NAG 2-DEOXY-GLUCOSE; N-ACETYL-D-GLUCOSAMINE HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 NAG 2(C8 H15 N O6) FORMUL 3 NA NA 1+ FORMUL 4 GOL 4(C3 H8 O3) FORMUL 8 HOH *292(H2 O) HELIX 1 1 GLU A 55 VAL A 59 5 5 HELIX 2 2 ASP A 75 GLY A 79 5 5 HELIX 3 3 ASP A 87 ALA A 91 5 5 HELIX 4 4 SER A 93 GLN A 107 1 15 HELIX 5 5 ASP A 128 GLY A 144 1 17 HELIX 6 6 GLU A 153 THR A 158 5 6 HELIX 7 7 ASP A 161 LYS A 179 1 19 HELIX 8 8 GLU A 191 THR A 196 5 6 HELIX 9 9 TYR A 201 ASP A 209 1 9 HELIX 10 10 ASN A 239 ALA A 241 5 3 HELIX 11 11 LEU A 242 GLY A 257 1 16 HELIX 12 12 PRO A 265 LYS A 268 5 4 HELIX 13 13 PRO A 288 GLN A 301 1 14 HELIX 14 14 SER A 312 MET A 317 1 6 HELIX 15 15 GLN A 328 ASN A 340 1 13 HELIX 16 16 ILE A 382 VAL A 386 5 5 HELIX 17 17 GLY A 485 GLN A 489 5 5 SHEET 1 A 8 PHE A 214 ILE A 215 0 SHEET 2 A 8 MET A 185 MET A 188 1 O ILE A 186 N PHE A 214 SHEET 3 A 8 GLY A 147 ASP A 151 1 N ILE A 150 O THR A 187 SHEET 4 A 8 SER A 110 GLY A 116 1 N LEU A 115 O ASP A 149 SHEET 5 A 8 VAL A 65 MET A 71 1 N ILE A 68 O LEU A 112 SHEET 6 A 8 VAL A 32 HIS A 38 1 N TRP A 37 O ASN A 67 SHEET 7 A 8 GLY A 307 TRP A 311 1 O VAL A 308 N VAL A 34 SHEET 8 A 8 VAL A 270 PRO A 274 1 N LEU A 273 O MET A 309 SHEET 1 B 2 GLY A 43 ARG A 44 0 SHEET 2 B 2 ASN A 50 ALA A 51 -1 O ALA A 51 N GLY A 43 SHEET 1 C 2 GLY A 226 ILE A 229 0 SHEET 2 C 2 GLY A 233 ALA A 236 -1 O GLY A 233 N ILE A 229 SHEET 1 D 2 THR A 351 SER A 353 0 SHEET 2 D 2 THR A 373 LYS A 375 -1 O LYS A 375 N THR A 351 SHEET 1 E 4 THR A 358 GLU A 361 0 SHEET 2 E 4 GLU A 411 TYR A 422 1 O THR A 420 N VAL A 360 SHEET 3 E 4 GLY A 398 SER A 408 -1 N GLY A 398 O VAL A 421 SHEET 4 E 4 THR A 387 SER A 389 -1 N THR A 387 O SER A 405 SHEET 1 F 3 ALA A 427 THR A 429 0 SHEET 2 F 3 SER A 449 HIS A 452 -1 O SER A 449 N THR A 429 SHEET 3 F 3 GLY A 456 ASP A 457 -1 O GLY A 456 N HIS A 452 SHEET 1 G 4 THR A 434 VAL A 437 0 SHEET 2 G 4 GLN A 490 VAL A 501 1 O THR A 499 N VAL A 436 SHEET 3 G 4 GLY A 474 TYR A 484 -1 N LEU A 482 O MET A 492 SHEET 4 G 4 ILE A 462 THR A 465 -1 N THR A 465 O THR A 479 SHEET 1 H 2 THR A 515 TYR A 516 0 SHEET 2 H 2 THR A 535 LYS A 536 -1 O THR A 535 N TYR A 516 SHEET 1 I 2 LYS A 521 HIS A 524 0 SHEET 2 I 2 ALA A 527 THR A 530 -1 O ALA A 527 N HIS A 524 SSBOND 1 CYS A 41 CYS A 53 1555 1555 2.24 LINK O4 NAG B 1 C1 NAG B 2 1555 1555 1.45 LINK O THR A 24 NA NA A 603 1555 1555 2.72 LINK OD1 ASN A 105 NA NA A 603 1555 1555 2.34 LINK O GLY A 144 NA NA A 603 1555 1555 2.34 LINK OD1 ASP A 146 NA NA A 603 1555 1555 2.20 LINK NA NA A 603 O AHOH A 968 1555 1555 2.21 CISPEP 1 SER A 69 PHE A 70 0 16.20 CISPEP 2 TRP A 311 SER A 312 0 6.14 CRYST1 65.998 65.998 257.537 90.00 90.00 120.00 P 31 1 2 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.015152 0.008748 0.000000 0.00000 SCALE2 0.000000 0.017496 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003883 0.00000