HEADER OXIDOREDUCTASE 18-OCT-12 4HMS TITLE CRYSTAL STRUCTURE OF PHZG FROM PSEUDOMONAS FLUORESCENS 2-79 IN COMPLEX TITLE 2 WITH A SECOND FMN IN THE SUBSTRATE BINDING SITE COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENAZINE BIOSYNTHESIS PROTEIN PHZG; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.4.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 3 ORGANISM_TAXID: 294; SOURCE 4 STRAIN: 2-79; SOURCE 5 GENE: PHZG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS EXCESS FMN, SUBSTRATE MIMIC, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.N.XU,E.G.AHUJA,W.BLANKENFELDT REVDAT 3 20-MAR-24 4HMS 1 REMARK SEQADV REVDAT 2 05-FEB-14 4HMS 1 JRNL REVDAT 1 07-AUG-13 4HMS 0 JRNL AUTH N.XU,E.G.AHUJA,P.JANNING,D.V.MAVRODI,L.S.THOMASHOW, JRNL AUTH 2 W.BLANKENFELDT JRNL TITL TRAPPED INTERMEDIATES IN CRYSTALS OF THE FMN-DEPENDENT JRNL TITL 2 OXIDASE PHZG PROVIDE INSIGHT INTO THE FINAL STEPS OF JRNL TITL 3 PHENAZINE BIOSYNTHESIS JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 1403 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 23897464 JRNL DOI 10.1107/S0907444913008354 REMARK 2 REMARK 2 RESOLUTION. 1.33 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.33 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 19.28 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 3 NUMBER OF REFLECTIONS : 113326 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.122 REMARK 3 R VALUE (WORKING SET) : 0.121 REMARK 3 FREE R VALUE : 0.154 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.050 REMARK 3 FREE R VALUE TEST SET COUNT : 5718 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 19.2796 - 4.1196 0.96 3708 196 0.1730 0.2031 REMARK 3 2 4.1196 - 3.2751 0.99 3694 194 0.1268 0.1386 REMARK 3 3 3.2751 - 2.8626 0.99 3638 192 0.1282 0.1552 REMARK 3 4 2.8626 - 2.6016 1.00 3629 191 0.1200 0.1546 REMARK 3 5 2.6016 - 2.4155 1.00 3633 193 0.1061 0.1286 REMARK 3 6 2.4155 - 2.2733 1.00 3598 185 0.0971 0.1175 REMARK 3 7 2.2733 - 2.1596 1.00 3619 194 0.0905 0.1300 REMARK 3 8 2.1596 - 2.0657 1.00 3579 188 0.0920 0.1249 REMARK 3 9 2.0657 - 1.9863 1.00 3611 190 0.0916 0.1216 REMARK 3 10 1.9863 - 1.9178 1.00 3586 190 0.0898 0.1439 REMARK 3 11 1.9178 - 1.8579 1.00 3593 189 0.0886 0.1320 REMARK 3 12 1.8579 - 1.8048 1.00 3572 186 0.0841 0.1217 REMARK 3 13 1.8048 - 1.7573 1.00 3585 188 0.0862 0.1188 REMARK 3 14 1.7573 - 1.7145 1.00 3605 187 0.0915 0.1430 REMARK 3 15 1.7145 - 1.6755 1.00 3558 190 0.0918 0.1395 REMARK 3 16 1.6755 - 1.6399 1.00 3590 193 0.0908 0.1372 REMARK 3 17 1.6399 - 1.6071 1.00 3553 184 0.0938 0.1457 REMARK 3 18 1.6071 - 1.5768 1.00 3585 189 0.0975 0.1366 REMARK 3 19 1.5768 - 1.5486 1.00 3560 188 0.1063 0.1369 REMARK 3 20 1.5486 - 1.5224 1.00 3553 187 0.1131 0.1642 REMARK 3 21 1.5224 - 1.4978 1.00 3577 187 0.1264 0.1495 REMARK 3 22 1.4978 - 1.4748 1.00 3564 187 0.1477 0.1986 REMARK 3 23 1.4748 - 1.4531 1.00 3533 186 0.1537 0.2031 REMARK 3 24 1.4531 - 1.4327 1.00 3572 190 0.1641 0.1990 REMARK 3 25 1.4327 - 1.4133 1.00 3549 184 0.1711 0.1915 REMARK 3 26 1.4133 - 1.3950 1.00 3611 177 0.1842 0.2391 REMARK 3 27 1.3950 - 1.3775 1.00 3510 209 0.1962 0.2307 REMARK 3 28 1.3775 - 1.3609 1.00 3539 196 0.2057 0.2338 REMARK 3 29 1.3609 - 1.3451 1.00 3530 195 0.2246 0.2598 REMARK 3 30 1.3451 - 1.3300 1.00 3574 213 0.2301 0.2596 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.110 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.550 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 17.34 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.014 3739 REMARK 3 ANGLE : 1.575 5170 REMARK 3 CHIRALITY : 0.093 540 REMARK 3 PLANARITY : 0.010 681 REMARK 3 DIHEDRAL : 15.696 1464 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HMS COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075660. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 19-FEB-04 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2-6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ESRF REMARK 200 BEAMLINE : ID29 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9791 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 210 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : SCALA, XSCALE, AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 113420 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.271 REMARK 200 RESOLUTION RANGE LOW (A) : 19.285 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.8 REMARK 200 DATA REDUNDANCY : 3.900 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.39 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.43 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21-24% (W/V) PEG 3350, 0.2M (NH4)2SO4, REMARK 280 0.1M BISTRIS, 10MM FMN, PH 6.2-6.6, VAPOR DIFFUSION, HANGING REMARK 280 DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.87000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.75000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.84500 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.75000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.87000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.84500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8690 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17870 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -57.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 ILE A 5 REMARK 465 GLN A 6 REMARK 465 GLY A 7 REMARK 465 LYS A 8 REMARK 465 PRO A 9 REMARK 465 LEU A 10 REMARK 465 LEU A 11 REMARK 465 GLY A 12 REMARK 465 LYS A 13 REMARK 465 GLY A 14 REMARK 465 MET A 15 REMARK 465 SER A 16 REMARK 465 GLU A 17 REMARK 465 SER A 18 REMARK 465 LEU A 19 REMARK 465 THR A 20 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 GLY B 3 REMARK 465 SER B 4 REMARK 465 ILE B 5 REMARK 465 GLN B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 PRO B 9 REMARK 465 LEU B 10 REMARK 465 LEU B 11 REMARK 465 GLY B 12 REMARK 465 LYS B 13 REMARK 465 GLY B 14 REMARK 465 MET B 15 REMARK 465 SER B 16 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 173 CG CD OE1 NE2 REMARK 470 GLU A 180 CG CD OE1 OE2 REMARK 470 ASP A 212 CG OD1 OD2 REMARK 470 GLU B 17 CG CD OE1 OE2 REMARK 470 GLU B 171 CD OE1 OE2 REMARK 470 GLN B 173 CG CD OE1 NE2 REMARK 470 GLU B 180 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS B 95 HO4' FMN B 301 1.08 REMARK 500 HZ1 LYS A 95 HO4' FMN A 301 1.11 REMARK 500 H GLY B 181 O HOH B 548 1.34 REMARK 500 HE22 GLN A 199 O HOH A 515 1.44 REMARK 500 HH21 ARG A 97 O HOH A 662 1.51 REMARK 500 HH11 ARG B 210 O HOH B 475 1.52 REMARK 500 OE2 GLU B 46 HH21 ARG B 49 1.59 REMARK 500 OE2 GLU A 154 O HOH A 668 1.67 REMARK 500 O THR B 213 O HOH B 591 1.77 REMARK 500 NH2 ARG A 97 O HOH A 662 1.79 REMARK 500 O HOH B 506 O HOH B 514 1.97 REMARK 500 NH1 ARG B 210 O HOH B 475 1.98 REMARK 500 O HOH A 503 O HOH B 401 1.99 REMARK 500 NE2 GLN A 199 O HOH A 515 2.07 REMARK 500 OE2 GLU B 46 O HOH B 621 2.08 REMARK 500 OH TYR A 182 O HOH A 625 2.09 REMARK 500 OD2 ASP B 24 O HOH B 613 2.12 REMARK 500 OE1 GLN A 199 O HOH A 515 2.14 REMARK 500 N GLY B 181 O HOH B 548 2.17 REMARK 500 O HOH A 531 O HOH A 569 2.19 REMARK 500 O HOH A 635 O HOH A 636 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 502 O HOH B 626 4555 2.10 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 47 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 ARG A 47 NE - CZ - NH2 ANGL. DEV. = -3.4 DEGREES REMARK 500 ARG A 57 NE - CZ - NH2 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG B 57 NE - CZ - NH1 ANGL. DEV. = 4.2 DEGREES REMARK 500 ARG B 188 NE - CZ - NH1 ANGL. DEV. = 3.0 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 27 57.84 -141.67 REMARK 500 SER A 153 -8.27 81.85 REMARK 500 THR B 89 -169.72 -163.21 REMARK 500 SER B 153 -7.59 81.30 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HMT RELATED DB: PDB REMARK 900 RELATED ID: 4HMU RELATED DB: PDB REMARK 900 RELATED ID: 4HMV RELATED DB: PDB REMARK 900 RELATED ID: 4HMW RELATED DB: PDB REMARK 900 RELATED ID: 4HMX RELATED DB: PDB DBREF 4HMS A 1 222 UNP Q51793 PHZG_PSEFL 1 222 DBREF 4HMS B 1 222 UNP Q51793 PHZG_PSEFL 1 222 SEQADV 4HMS GLY A -2 UNP Q51793 EXPRESSION TAG SEQADV 4HMS SER A -1 UNP Q51793 EXPRESSION TAG SEQADV 4HMS HIS A 0 UNP Q51793 EXPRESSION TAG SEQADV 4HMS GLY B -2 UNP Q51793 EXPRESSION TAG SEQADV 4HMS SER B -1 UNP Q51793 EXPRESSION TAG SEQADV 4HMS HIS B 0 UNP Q51793 EXPRESSION TAG SEQRES 1 A 225 GLY SER HIS MET ASN GLY SER ILE GLN GLY LYS PRO LEU SEQRES 2 A 225 LEU GLY LYS GLY MET SER GLU SER LEU THR GLY THR LEU SEQRES 3 A 225 ASP ALA PRO PHE PRO GLU TYR GLN THR LEU PRO ALA ASP SEQRES 4 A 225 PRO MET SER VAL LEU HIS ASN TRP LEU GLU ARG ALA ARG SEQRES 5 A 225 ARG VAL GLY ILE ARG GLU PRO ARG ALA LEU ALA LEU ALA SEQRES 6 A 225 THR ALA ASP SER GLN GLY ARG PRO SER THR ARG ILE VAL SEQRES 7 A 225 VAL ILE SER GLU ILE SER ASP ALA GLY VAL VAL PHE SER SEQRES 8 A 225 THR HIS ALA GLY SER GLN LYS GLY ARG GLU LEU LEU HIS SEQRES 9 A 225 ASN PRO TRP ALA SER GLY VAL LEU TYR TRP ARG GLU THR SEQRES 10 A 225 SER GLN GLN ILE ILE LEU ASN GLY GLN ALA VAL ARG LEU SEQRES 11 A 225 PRO ASN ALA LYS ALA ASP ASP ALA TRP LEU LYS ARG PRO SEQRES 12 A 225 TYR ALA THR HIS PRO MET SER SER VAL SER ARG GLN SER SEQRES 13 A 225 GLU GLU LEU GLN ASP VAL GLN ALA MET ARG ASN ALA ALA SEQRES 14 A 225 ARG GLN LEU ALA GLU LEU GLN GLY PRO LEU PRO ARG PRO SEQRES 15 A 225 GLU GLY TYR CYS VAL PHE GLU LEU ARG LEU GLU SER LEU SEQRES 16 A 225 GLU PHE TRP GLY ASN GLY GLN GLU ARG LEU HIS GLU ARG SEQRES 17 A 225 LEU ARG TYR ASP ARG SER ASP THR GLY TRP ASN VAL ARG SEQRES 18 A 225 ARG LEU GLN PRO SEQRES 1 B 225 GLY SER HIS MET ASN GLY SER ILE GLN GLY LYS PRO LEU SEQRES 2 B 225 LEU GLY LYS GLY MET SER GLU SER LEU THR GLY THR LEU SEQRES 3 B 225 ASP ALA PRO PHE PRO GLU TYR GLN THR LEU PRO ALA ASP SEQRES 4 B 225 PRO MET SER VAL LEU HIS ASN TRP LEU GLU ARG ALA ARG SEQRES 5 B 225 ARG VAL GLY ILE ARG GLU PRO ARG ALA LEU ALA LEU ALA SEQRES 6 B 225 THR ALA ASP SER GLN GLY ARG PRO SER THR ARG ILE VAL SEQRES 7 B 225 VAL ILE SER GLU ILE SER ASP ALA GLY VAL VAL PHE SER SEQRES 8 B 225 THR HIS ALA GLY SER GLN LYS GLY ARG GLU LEU LEU HIS SEQRES 9 B 225 ASN PRO TRP ALA SER GLY VAL LEU TYR TRP ARG GLU THR SEQRES 10 B 225 SER GLN GLN ILE ILE LEU ASN GLY GLN ALA VAL ARG LEU SEQRES 11 B 225 PRO ASN ALA LYS ALA ASP ASP ALA TRP LEU LYS ARG PRO SEQRES 12 B 225 TYR ALA THR HIS PRO MET SER SER VAL SER ARG GLN SER SEQRES 13 B 225 GLU GLU LEU GLN ASP VAL GLN ALA MET ARG ASN ALA ALA SEQRES 14 B 225 ARG GLN LEU ALA GLU LEU GLN GLY PRO LEU PRO ARG PRO SEQRES 15 B 225 GLU GLY TYR CYS VAL PHE GLU LEU ARG LEU GLU SER LEU SEQRES 16 B 225 GLU PHE TRP GLY ASN GLY GLN GLU ARG LEU HIS GLU ARG SEQRES 17 B 225 LEU ARG TYR ASP ARG SER ASP THR GLY TRP ASN VAL ARG SEQRES 18 B 225 ARG LEU GLN PRO HET FMN A 301 50 HET SO4 A 302 5 HET SO4 A 303 5 HET SO4 A 304 5 HET FMN B 301 50 HET FMN B 302 50 HET SO4 B 303 5 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM SO4 SULFATE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN 3(C17 H21 N4 O9 P) FORMUL 4 SO4 4(O4 S 2-) FORMUL 10 HOH *602(H2 O) HELIX 1 1 PRO A 28 LEU A 33 1 6 HELIX 2 2 ASP A 36 GLY A 52 1 17 HELIX 3 3 SER A 93 ASN A 102 1 10 HELIX 4 4 PRO A 128 ARG A 139 1 12 HELIX 5 5 PRO A 140 ALA A 142 5 3 HELIX 6 6 THR A 143 SER A 150 1 8 HELIX 7 7 ASP A 158 GLU A 171 1 14 HELIX 8 8 PRO B 28 LEU B 33 1 6 HELIX 9 9 ASP B 36 GLY B 52 1 17 HELIX 10 10 SER B 93 ASN B 102 1 10 HELIX 11 11 PRO B 128 ARG B 139 1 12 HELIX 12 12 PRO B 140 ALA B 142 5 3 HELIX 13 13 THR B 143 SER B 150 1 8 HELIX 14 14 ASP B 158 GLU B 171 1 14 SHEET 1 A 7 PRO A 70 VAL A 76 0 SHEET 2 A 7 ALA A 58 ALA A 64 -1 N LEU A 59 O VAL A 75 SHEET 3 A 7 TRP A 104 TRP A 111 -1 O SER A 106 N ALA A 62 SHEET 4 A 7 GLN A 116 ARG A 126 -1 O GLN A 116 N TRP A 111 SHEET 5 A 7 TYR A 182 GLN A 199 -1 O GLU A 190 N ASN A 121 SHEET 6 A 7 GLY A 84 HIS A 90 -1 N VAL A 85 O LEU A 187 SHEET 7 A 7 GLU A 79 ILE A 80 -1 N GLU A 79 O VAL A 86 SHEET 1 B 7 PRO A 70 VAL A 76 0 SHEET 2 B 7 ALA A 58 ALA A 64 -1 N LEU A 59 O VAL A 75 SHEET 3 B 7 TRP A 104 TRP A 111 -1 O SER A 106 N ALA A 62 SHEET 4 B 7 GLN A 116 ARG A 126 -1 O GLN A 116 N TRP A 111 SHEET 5 B 7 TYR A 182 GLN A 199 -1 O GLU A 190 N ASN A 121 SHEET 6 B 7 LEU A 202 ARG A 210 -1 O TYR A 208 N LEU A 192 SHEET 7 B 7 TRP A 215 ARG A 219 -1 O ASN A 216 N ASP A 209 SHEET 1 C 7 PRO B 70 VAL B 76 0 SHEET 2 C 7 ALA B 58 ALA B 64 -1 N LEU B 59 O VAL B 75 SHEET 3 C 7 TRP B 104 TRP B 111 -1 O SER B 106 N ALA B 62 SHEET 4 C 7 GLN B 116 ARG B 126 -1 O LEU B 120 N GLY B 107 SHEET 5 C 7 TYR B 182 GLN B 199 -1 O GLU B 190 N ASN B 121 SHEET 6 C 7 GLY B 84 HIS B 90 -1 N VAL B 85 O LEU B 187 SHEET 7 C 7 GLU B 79 ILE B 80 -1 N GLU B 79 O VAL B 86 SHEET 1 D 7 PRO B 70 VAL B 76 0 SHEET 2 D 7 ALA B 58 ALA B 64 -1 N LEU B 59 O VAL B 75 SHEET 3 D 7 TRP B 104 TRP B 111 -1 O SER B 106 N ALA B 62 SHEET 4 D 7 GLN B 116 ARG B 126 -1 O LEU B 120 N GLY B 107 SHEET 5 D 7 TYR B 182 GLN B 199 -1 O GLU B 190 N ASN B 121 SHEET 6 D 7 LEU B 202 ARG B 210 -1 O TYR B 208 N LEU B 192 SHEET 7 D 7 TRP B 215 LEU B 220 -1 O ASN B 216 N ASP B 209 CISPEP 1 GLY A 174 PRO A 175 0 1.95 SITE 1 AC1 22 ARG A 73 ILE A 74 VAL A 75 VAL A 76 SITE 2 AC1 22 SER A 88 THR A 89 SER A 93 GLN A 94 SITE 3 AC1 22 LYS A 95 GLN A 152 SER A 153 HOH A 407 SITE 4 AC1 22 HOH A 412 HOH A 424 HOH A 456 HOH A 460 SITE 5 AC1 22 LEU B 19 TYR B 110 GLN B 117 TRP B 195 SITE 6 AC1 22 ARG B 205 HOH B 423 SITE 1 AC2 4 GLN A 67 ARG A 69 ARG A 188 HOH B 696 SITE 1 AC3 5 GLN A 31 LEU A 33 ARG A 219 HOH A 592 SITE 2 AC3 5 HOH A 678 SITE 1 AC4 5 ARG A 57 SER A 78 GLU A 79 ILE A 80 SITE 2 AC4 5 HOH A 555 SITE 1 AC5 22 TYR A 110 GLN A 117 TRP A 195 ARG A 205 SITE 2 AC5 22 HOH A 414 ARG B 73 ILE B 74 VAL B 75 SITE 3 AC5 22 VAL B 76 SER B 88 THR B 89 SER B 93 SITE 4 AC5 22 GLN B 94 LYS B 95 GLN B 152 SER B 153 SITE 5 AC5 22 FMN B 302 HOH B 417 HOH B 434 HOH B 436 SITE 6 AC5 22 HOH B 458 HOH B 492 SITE 1 AC6 10 TRP A 195 HIS A 203 ARG B 57 VAL B 76 SITE 2 AC6 10 SER B 88 ARG B 139 TYR B 182 FMN B 301 SITE 3 AC6 10 HOH B 631 HOH B 685 SITE 1 AC7 4 ARG B 57 SER B 78 GLU B 79 ILE B 80 CRYST1 57.740 63.690 133.500 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017319 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015701 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007491 0.00000 CONECT 6958 6959 6975 CONECT 6959 6958 6960 6961 CONECT 6960 6959 CONECT 6961 6959 6962 6989 CONECT 6962 6961 6963 6964 CONECT 6963 6962 CONECT 6964 6962 6965 6975 CONECT 6965 6964 6966 CONECT 6966 6965 6967 6973 CONECT 6967 6966 6968 6990 CONECT 6968 6967 6969 6970 CONECT 6969 6968 6991 6992 6993 CONECT 6970 6968 6971 6972 CONECT 6971 6970 6994 6995 6996 CONECT 6972 6970 6973 6997 CONECT 6973 6966 6972 6974 CONECT 6974 6973 6975 6976 CONECT 6975 6958 6964 6974 CONECT 6976 6974 6977 6998 6999 CONECT 6977 6976 6978 6979 7000 CONECT 6978 6977 7001 CONECT 6979 6977 6980 6981 7002 CONECT 6980 6979 7003 CONECT 6981 6979 6982 6983 7004 CONECT 6982 6981 7005 CONECT 6983 6981 6984 7006 7007 CONECT 6984 6983 6985 CONECT 6985 6984 6986 6987 6988 CONECT 6986 6985 CONECT 6987 6985 CONECT 6988 6985 CONECT 6989 6961 CONECT 6990 6967 CONECT 6991 6969 CONECT 6992 6969 CONECT 6993 6969 CONECT 6994 6971 CONECT 6995 6971 CONECT 6996 6971 CONECT 6997 6972 CONECT 6998 6976 CONECT 6999 6976 CONECT 7000 6977 CONECT 7001 6978 CONECT 7002 6979 CONECT 7003 6980 CONECT 7004 6981 CONECT 7005 6982 CONECT 7006 6983 CONECT 7007 6983 CONECT 7008 7009 7010 7011 7012 CONECT 7009 7008 CONECT 7010 7008 CONECT 7011 7008 CONECT 7012 7008 CONECT 7013 7014 7015 7016 7017 CONECT 7014 7013 CONECT 7015 7013 CONECT 7016 7013 CONECT 7017 7013 CONECT 7018 7019 7020 7021 7022 CONECT 7019 7018 CONECT 7020 7018 CONECT 7021 7018 CONECT 7022 7018 CONECT 7023 7024 7040 CONECT 7024 7023 7025 7026 CONECT 7025 7024 CONECT 7026 7024 7027 7054 CONECT 7027 7026 7028 7029 CONECT 7028 7027 CONECT 7029 7027 7030 7040 CONECT 7030 7029 7031 CONECT 7031 7030 7032 7038 CONECT 7032 7031 7033 7055 CONECT 7033 7032 7034 7035 CONECT 7034 7033 7056 7057 7058 CONECT 7035 7033 7036 7037 CONECT 7036 7035 7059 7060 7061 CONECT 7037 7035 7038 7062 CONECT 7038 7031 7037 7039 CONECT 7039 7038 7040 7041 CONECT 7040 7023 7029 7039 CONECT 7041 7039 7042 7063 7064 CONECT 7042 7041 7043 7044 7065 CONECT 7043 7042 7066 CONECT 7044 7042 7045 7046 7067 CONECT 7045 7044 7068 CONECT 7046 7044 7047 7048 7069 CONECT 7047 7046 7070 CONECT 7048 7046 7049 7071 7072 CONECT 7049 7048 7050 CONECT 7050 7049 7051 7052 7053 CONECT 7051 7050 CONECT 7052 7050 CONECT 7053 7050 CONECT 7054 7026 CONECT 7055 7032 CONECT 7056 7034 CONECT 7057 7034 CONECT 7058 7034 CONECT 7059 7036 CONECT 7060 7036 CONECT 7061 7036 CONECT 7062 7037 CONECT 7063 7041 CONECT 7064 7041 CONECT 7065 7042 CONECT 7066 7043 CONECT 7067 7044 CONECT 7068 7045 CONECT 7069 7046 CONECT 7070 7047 CONECT 7071 7048 CONECT 7072 7048 CONECT 7073 7074 7090 CONECT 7074 7073 7075 7076 CONECT 7075 7074 CONECT 7076 7074 7077 7104 CONECT 7077 7076 7078 7079 CONECT 7078 7077 CONECT 7079 7077 7080 7090 CONECT 7080 7079 7081 CONECT 7081 7080 7082 7088 CONECT 7082 7081 7083 7105 CONECT 7083 7082 7084 7085 CONECT 7084 7083 7106 7107 7108 CONECT 7085 7083 7086 7087 CONECT 7086 7085 7109 7110 7111 CONECT 7087 7085 7088 7112 CONECT 7088 7081 7087 7089 CONECT 7089 7088 7090 7091 CONECT 7090 7073 7079 7089 CONECT 7091 7089 7092 7113 7114 CONECT 7092 7091 7093 7094 7115 CONECT 7093 7092 7116 CONECT 7094 7092 7095 7096 7117 CONECT 7095 7094 7118 CONECT 7096 7094 7097 7098 7119 CONECT 7097 7096 7120 CONECT 7098 7096 7099 7121 7122 CONECT 7099 7098 7100 CONECT 7100 7099 7101 7102 7103 CONECT 7101 7100 CONECT 7102 7100 CONECT 7103 7100 CONECT 7104 7076 CONECT 7105 7082 CONECT 7106 7084 CONECT 7107 7084 CONECT 7108 7084 CONECT 7109 7086 CONECT 7110 7086 CONECT 7111 7086 CONECT 7112 7087 CONECT 7113 7091 CONECT 7114 7091 CONECT 7115 7092 CONECT 7116 7093 CONECT 7117 7094 CONECT 7118 7095 CONECT 7119 7096 CONECT 7120 7097 CONECT 7121 7098 CONECT 7122 7098 CONECT 7123 7124 7125 7126 7127 CONECT 7124 7123 CONECT 7125 7123 CONECT 7126 7123 CONECT 7127 7123 MASTER 413 0 7 14 28 0 21 6 3953 2 170 36 END