HEADER OXIDOREDUCTASE 18-OCT-12 4HMT TITLE CRYSTAL STRUCTURE OF PHZG FROM PSEUDOMONAS FLUORESCENS 2-79 IN COMPLEX TITLE 2 WITH HEXAHYDROPHENAZINE-1,6-DICARBOXYLIC ACID COMPND MOL_ID: 1; COMPND 2 MOLECULE: PHENAZINE BIOSYNTHESIS PROTEIN PHZG; COMPND 3 CHAIN: A, B; COMPND 4 EC: 1.4.-.-; COMPND 5 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: PSEUDOMONAS FLUORESCENS; SOURCE 3 ORGANISM_TAXID: 294; SOURCE 4 STRAIN: 2-79; SOURCE 5 GENE: PHZG; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA 2 PLYSS; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET15B KEYWDS PHENAZINE BIOSYNTHESIS, TRAPPING, INTERMEDIATE, OXIDOREDUCTASE EXPDTA X-RAY DIFFRACTION AUTHOR N.N.XU,E.G.AHUJA,W.BLANKENFELDT REVDAT 3 20-MAR-24 4HMT 1 REMARK SEQADV REVDAT 2 05-FEB-14 4HMT 1 JRNL REVDAT 1 07-AUG-13 4HMT 0 JRNL AUTH N.XU,E.G.AHUJA,P.JANNING,D.V.MAVRODI,L.S.THOMASHOW, JRNL AUTH 2 W.BLANKENFELDT JRNL TITL TRAPPED INTERMEDIATES IN CRYSTALS OF THE FMN-DEPENDENT JRNL TITL 2 OXIDASE PHZG PROVIDE INSIGHT INTO THE FINAL STEPS OF JRNL TITL 3 PHENAZINE BIOSYNTHESIS JRNL REF ACTA CRYSTALLOGR.,SECT.D V. 69 1403 2013 JRNL REFN ISSN 0907-4449 JRNL PMID 23897464 JRNL DOI 10.1107/S0907444913008354 REMARK 2 REMARK 2 RESOLUTION. 1.42 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8.1_1168 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : ML REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.42 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.61 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 1.910 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 89814 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.118 REMARK 3 R VALUE (WORKING SET) : 0.116 REMARK 3 FREE R VALUE : 0.153 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4492 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 43.6324 - 4.4108 0.97 3085 158 0.1809 0.2042 REMARK 3 2 4.4108 - 3.5015 0.99 3014 160 0.1183 0.1294 REMARK 3 3 3.5015 - 3.0590 0.98 2950 154 0.1174 0.1480 REMARK 3 4 3.0590 - 2.7794 0.98 2943 158 0.1171 0.1514 REMARK 3 5 2.7794 - 2.5802 0.98 2933 156 0.1114 0.1548 REMARK 3 6 2.5802 - 2.4281 0.98 2896 151 0.0994 0.1533 REMARK 3 7 2.4281 - 2.3065 0.98 2913 151 0.0938 0.1234 REMARK 3 8 2.3065 - 2.2061 0.97 2850 151 0.0899 0.1281 REMARK 3 9 2.2061 - 2.1211 0.98 2897 149 0.0821 0.1311 REMARK 3 10 2.1211 - 2.0479 0.97 2855 150 0.0791 0.1175 REMARK 3 11 2.0479 - 1.9839 0.98 2870 155 0.0788 0.1121 REMARK 3 12 1.9839 - 1.9272 0.97 2855 147 0.0775 0.1246 REMARK 3 13 1.9272 - 1.8765 0.97 2839 152 0.0778 0.1267 REMARK 3 14 1.8765 - 1.8307 0.97 2867 149 0.0807 0.1240 REMARK 3 15 1.8307 - 1.7891 0.97 2816 156 0.0808 0.1311 REMARK 3 16 1.7891 - 1.7510 0.97 2807 148 0.0851 0.1387 REMARK 3 17 1.7510 - 1.7160 0.97 2845 149 0.0921 0.1382 REMARK 3 18 1.7160 - 1.6836 0.96 2814 148 0.0988 0.1611 REMARK 3 19 1.6836 - 1.6535 0.97 2803 153 0.1019 0.1517 REMARK 3 20 1.6535 - 1.6255 0.96 2802 146 0.1100 0.1768 REMARK 3 21 1.6255 - 1.5993 0.97 2815 143 0.1140 0.1742 REMARK 3 22 1.5993 - 1.5747 0.95 2776 149 0.1210 0.1668 REMARK 3 23 1.5747 - 1.5515 0.96 2762 144 0.1362 0.1960 REMARK 3 24 1.5515 - 1.5296 0.95 2775 139 0.1443 0.2001 REMARK 3 25 1.5296 - 1.5090 0.96 2777 148 0.1493 0.1934 REMARK 3 26 1.5090 - 1.4894 0.94 2776 147 0.1846 0.2287 REMARK 3 27 1.4894 - 1.4708 0.95 2741 139 0.1771 0.2198 REMARK 3 28 1.4708 - 1.4530 0.95 2746 145 0.1934 0.2615 REMARK 3 29 1.4530 - 1.4361 0.94 2747 150 0.1968 0.2574 REMARK 3 30 1.4361 - 1.4200 0.94 2753 147 0.2088 0.2611 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : 0.120 REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 12.840 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 23.32 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: NULL REMARK 3 OPERATOR: NULL REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.017 3687 REMARK 3 ANGLE : 1.667 5080 REMARK 3 CHIRALITY : 0.114 538 REMARK 3 PLANARITY : 0.011 671 REMARK 3 DIHEDRAL : 17.021 1496 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HMT COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY PDBJ ON 24-OCT-12. REMARK 100 THE DEPOSITION ID IS D_1000075661. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-FEB-09 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.2-6.6 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X10SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.98004 REMARK 200 MONOCHROMATOR : SI(111) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XSCALE REMARK 200 DATA SCALING SOFTWARE : XSCALE, AIMLESS REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 89891 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.420 REMARK 200 RESOLUTION RANGE LOW (A) : 45.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: FOURIER SYNTHESIS REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.07 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 21-24% (W/V) PEG 3350, 0.2M (NH4)2SO4, REMARK 280 0.1M BISTRIS, 15UM PHZF, 30UM PHZA/B, 0.2M TRIS-HCL PH 7.5, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 28.79650 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 66.77300 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 31.71250 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 66.77300 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 28.79650 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 31.71250 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 8560 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 17650 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A -2 REMARK 465 SER A -1 REMARK 465 HIS A 0 REMARK 465 MET A 1 REMARK 465 ASN A 2 REMARK 465 GLY A 3 REMARK 465 SER A 4 REMARK 465 ILE A 5 REMARK 465 GLN A 6 REMARK 465 GLY A 7 REMARK 465 LYS A 8 REMARK 465 PRO A 9 REMARK 465 LEU A 10 REMARK 465 LEU A 11 REMARK 465 GLY A 12 REMARK 465 LYS A 13 REMARK 465 GLY A 14 REMARK 465 MET A 15 REMARK 465 SER A 16 REMARK 465 GLU A 17 REMARK 465 GLY B -2 REMARK 465 SER B -1 REMARK 465 HIS B 0 REMARK 465 MET B 1 REMARK 465 ASN B 2 REMARK 465 GLY B 3 REMARK 465 SER B 4 REMARK 465 ILE B 5 REMARK 465 GLN B 6 REMARK 465 GLY B 7 REMARK 465 LYS B 8 REMARK 465 PRO B 9 REMARK 465 LEU B 10 REMARK 465 LEU B 11 REMARK 465 GLY B 12 REMARK 465 LYS B 13 REMARK 465 GLY B 14 REMARK 465 MET B 15 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 173 CG CD OE1 NE2 REMARK 470 GLU A 180 CG CD OE1 OE2 REMARK 470 ASP A 212 CG OD1 OD2 REMARK 470 SER B 16 OG REMARK 470 GLN B 173 CG CD OE1 NE2 REMARK 470 GLU B 180 CG CD OE1 OE2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 HZ1 LYS B 95 HO4' FMN B 301 1.06 REMARK 500 HZ1 LYS A 95 HO4' FMN A 301 1.10 REMARK 500 HG1 THR A 22 O HOH A 609 1.33 REMARK 500 OG1 THR A 20 HE ARG B 54 1.36 REMARK 500 HH11 ARG B 210 O HOH B 471 1.46 REMARK 500 NH2 ARG B 54 O HOH B 527 1.82 REMARK 500 O HOH B 526 O HOH B 586 2.00 REMARK 500 O HOH B 475 O HOH B 602 2.00 REMARK 500 NH1 ARG B 210 O HOH B 471 2.02 REMARK 500 O HOH A 538 O HOH A 576 2.09 REMARK 500 OG1 THR A 20 NE ARG B 54 2.11 REMARK 500 O THR A 20 NH2 ARG B 54 2.13 REMARK 500 OG1 THR A 22 O HOH A 609 2.14 REMARK 500 OD2 ASP A 24 O HOH A 591 2.15 REMARK 500 O HOH A 505 O HOH A 611 2.17 REMARK 500 CZ ARG B 54 O HOH B 527 2.19 REMARK 500 O HOH B 449 O HOH B 489 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 GLN B 117 CB GLN B 117 CG -0.264 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG B 57 NE - CZ - NH1 ANGL. DEV. = 3.2 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 153 -4.13 80.11 REMARK 500 SER B 153 -5.26 80.63 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NNV A 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE FMN B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE NNV B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE SO4 B 303 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HMS RELATED DB: PDB REMARK 900 RELATED ID: 4HMU RELATED DB: PDB REMARK 900 RELATED ID: 4HMV RELATED DB: PDB REMARK 900 RELATED ID: 4HMW RELATED DB: PDB REMARK 900 RELATED ID: 4HMX RELATED DB: PDB DBREF 4HMT A 1 222 UNP Q51793 PHZG_PSEFL 1 222 DBREF 4HMT B 1 222 UNP Q51793 PHZG_PSEFL 1 222 SEQADV 4HMT GLY A -2 UNP Q51793 EXPRESSION TAG SEQADV 4HMT SER A -1 UNP Q51793 EXPRESSION TAG SEQADV 4HMT HIS A 0 UNP Q51793 EXPRESSION TAG SEQADV 4HMT GLY B -2 UNP Q51793 EXPRESSION TAG SEQADV 4HMT SER B -1 UNP Q51793 EXPRESSION TAG SEQADV 4HMT HIS B 0 UNP Q51793 EXPRESSION TAG SEQRES 1 A 225 GLY SER HIS MET ASN GLY SER ILE GLN GLY LYS PRO LEU SEQRES 2 A 225 LEU GLY LYS GLY MET SER GLU SER LEU THR GLY THR LEU SEQRES 3 A 225 ASP ALA PRO PHE PRO GLU TYR GLN THR LEU PRO ALA ASP SEQRES 4 A 225 PRO MET SER VAL LEU HIS ASN TRP LEU GLU ARG ALA ARG SEQRES 5 A 225 ARG VAL GLY ILE ARG GLU PRO ARG ALA LEU ALA LEU ALA SEQRES 6 A 225 THR ALA ASP SER GLN GLY ARG PRO SER THR ARG ILE VAL SEQRES 7 A 225 VAL ILE SER GLU ILE SER ASP ALA GLY VAL VAL PHE SER SEQRES 8 A 225 THR HIS ALA GLY SER GLN LYS GLY ARG GLU LEU LEU HIS SEQRES 9 A 225 ASN PRO TRP ALA SER GLY VAL LEU TYR TRP ARG GLU THR SEQRES 10 A 225 SER GLN GLN ILE ILE LEU ASN GLY GLN ALA VAL ARG LEU SEQRES 11 A 225 PRO ASN ALA LYS ALA ASP ASP ALA TRP LEU LYS ARG PRO SEQRES 12 A 225 TYR ALA THR HIS PRO MET SER SER VAL SER ARG GLN SER SEQRES 13 A 225 GLU GLU LEU GLN ASP VAL GLN ALA MET ARG ASN ALA ALA SEQRES 14 A 225 ARG GLN LEU ALA GLU LEU GLN GLY PRO LEU PRO ARG PRO SEQRES 15 A 225 GLU GLY TYR CYS VAL PHE GLU LEU ARG LEU GLU SER LEU SEQRES 16 A 225 GLU PHE TRP GLY ASN GLY GLN GLU ARG LEU HIS GLU ARG SEQRES 17 A 225 LEU ARG TYR ASP ARG SER ASP THR GLY TRP ASN VAL ARG SEQRES 18 A 225 ARG LEU GLN PRO SEQRES 1 B 225 GLY SER HIS MET ASN GLY SER ILE GLN GLY LYS PRO LEU SEQRES 2 B 225 LEU GLY LYS GLY MET SER GLU SER LEU THR GLY THR LEU SEQRES 3 B 225 ASP ALA PRO PHE PRO GLU TYR GLN THR LEU PRO ALA ASP SEQRES 4 B 225 PRO MET SER VAL LEU HIS ASN TRP LEU GLU ARG ALA ARG SEQRES 5 B 225 ARG VAL GLY ILE ARG GLU PRO ARG ALA LEU ALA LEU ALA SEQRES 6 B 225 THR ALA ASP SER GLN GLY ARG PRO SER THR ARG ILE VAL SEQRES 7 B 225 VAL ILE SER GLU ILE SER ASP ALA GLY VAL VAL PHE SER SEQRES 8 B 225 THR HIS ALA GLY SER GLN LYS GLY ARG GLU LEU LEU HIS SEQRES 9 B 225 ASN PRO TRP ALA SER GLY VAL LEU TYR TRP ARG GLU THR SEQRES 10 B 225 SER GLN GLN ILE ILE LEU ASN GLY GLN ALA VAL ARG LEU SEQRES 11 B 225 PRO ASN ALA LYS ALA ASP ASP ALA TRP LEU LYS ARG PRO SEQRES 12 B 225 TYR ALA THR HIS PRO MET SER SER VAL SER ARG GLN SER SEQRES 13 B 225 GLU GLU LEU GLN ASP VAL GLN ALA MET ARG ASN ALA ALA SEQRES 14 B 225 ARG GLN LEU ALA GLU LEU GLN GLY PRO LEU PRO ARG PRO SEQRES 15 B 225 GLU GLY TYR CYS VAL PHE GLU LEU ARG LEU GLU SER LEU SEQRES 16 B 225 GLU PHE TRP GLY ASN GLY GLN GLU ARG LEU HIS GLU ARG SEQRES 17 B 225 LEU ARG TYR ASP ARG SER ASP THR GLY TRP ASN VAL ARG SEQRES 18 B 225 ARG LEU GLN PRO HET FMN A 301 50 HET NNV A 302 32 HET SO4 A 303 5 HET SO4 A 304 5 HET SO4 A 305 5 HET FMN B 301 50 HET NNV B 302 32 HET SO4 B 303 5 HETNAM FMN FLAVIN MONONUCLEOTIDE HETNAM NNV (1R,5AS,6R)-1,2,5,5A,6,7-HEXAHYDROPHENAZINE-1,6- HETNAM 2 NNV DICARBOXYLIC ACID HETNAM SO4 SULFATE ION HETSYN FMN RIBOFLAVIN MONOPHOSPHATE FORMUL 3 FMN 2(C17 H21 N4 O9 P) FORMUL 4 NNV 2(C14 H14 N2 O4) FORMUL 5 SO4 4(O4 S 2-) FORMUL 11 HOH *471(H2 O) HELIX 1 1 PRO A 28 LEU A 33 1 6 HELIX 2 2 ASP A 36 GLY A 52 1 17 HELIX 3 3 SER A 93 ASN A 102 1 10 HELIX 4 4 PRO A 128 ARG A 139 1 12 HELIX 5 5 PRO A 140 ALA A 142 5 3 HELIX 6 6 THR A 143 SER A 150 1 8 HELIX 7 7 ASP A 158 GLU A 171 1 14 HELIX 8 8 PHE B 27 LEU B 33 1 7 HELIX 9 9 ASP B 36 GLY B 52 1 17 HELIX 10 10 SER B 93 ASN B 102 1 10 HELIX 11 11 PRO B 128 ARG B 139 1 12 HELIX 12 12 PRO B 140 ALA B 142 5 3 HELIX 13 13 THR B 143 SER B 150 1 8 HELIX 14 14 ASP B 158 ALA B 170 1 13 HELIX 15 15 GLU B 171 GLN B 173 5 3 SHEET 1 A 7 PRO A 70 VAL A 76 0 SHEET 2 A 7 ALA A 58 ALA A 64 -1 N LEU A 59 O VAL A 75 SHEET 3 A 7 TRP A 104 TRP A 111 -1 O SER A 106 N ALA A 62 SHEET 4 A 7 GLN A 116 ARG A 126 -1 O LEU A 120 N GLY A 107 SHEET 5 A 7 TYR A 182 GLN A 199 -1 O GLU A 190 N ASN A 121 SHEET 6 A 7 GLY A 84 HIS A 90 -1 N VAL A 85 O LEU A 187 SHEET 7 A 7 GLU A 79 ILE A 80 -1 N GLU A 79 O VAL A 86 SHEET 1 B 7 PRO A 70 VAL A 76 0 SHEET 2 B 7 ALA A 58 ALA A 64 -1 N LEU A 59 O VAL A 75 SHEET 3 B 7 TRP A 104 TRP A 111 -1 O SER A 106 N ALA A 62 SHEET 4 B 7 GLN A 116 ARG A 126 -1 O LEU A 120 N GLY A 107 SHEET 5 B 7 TYR A 182 GLN A 199 -1 O GLU A 190 N ASN A 121 SHEET 6 B 7 LEU A 202 ARG A 210 -1 O TYR A 208 N LEU A 192 SHEET 7 B 7 TRP A 215 ARG A 219 -1 O ARG A 218 N ARG A 207 SHEET 1 C 7 PRO B 70 VAL B 76 0 SHEET 2 C 7 ALA B 58 ALA B 64 -1 N LEU B 59 O VAL B 75 SHEET 3 C 7 TRP B 104 TRP B 111 -1 O SER B 106 N ALA B 62 SHEET 4 C 7 GLN B 116 ARG B 126 -1 O LEU B 120 N GLY B 107 SHEET 5 C 7 TYR B 182 GLN B 199 -1 O ARG B 188 N GLN B 123 SHEET 6 C 7 GLY B 84 HIS B 90 -1 N VAL B 85 O LEU B 187 SHEET 7 C 7 GLU B 79 ILE B 80 -1 N GLU B 79 O VAL B 86 SHEET 1 D 7 PRO B 70 VAL B 76 0 SHEET 2 D 7 ALA B 58 ALA B 64 -1 N LEU B 59 O VAL B 75 SHEET 3 D 7 TRP B 104 TRP B 111 -1 O SER B 106 N ALA B 62 SHEET 4 D 7 GLN B 116 ARG B 126 -1 O LEU B 120 N GLY B 107 SHEET 5 D 7 TYR B 182 GLN B 199 -1 O ARG B 188 N GLN B 123 SHEET 6 D 7 LEU B 202 ARG B 210 -1 O TYR B 208 N LEU B 192 SHEET 7 D 7 TRP B 215 LEU B 220 -1 O ASN B 216 N ASP B 209 CISPEP 1 GLY A 174 PRO A 175 0 -1.11 SITE 1 AC1 22 ARG A 73 ILE A 74 VAL A 75 VAL A 76 SITE 2 AC1 22 SER A 88 THR A 89 SER A 93 GLN A 94 SITE 3 AC1 22 LYS A 95 GLN A 152 SER A 153 NNV A 302 SITE 4 AC1 22 HOH A 407 HOH A 412 HOH A 424 HOH A 460 SITE 5 AC1 22 LEU B 19 TYR B 110 GLN B 117 TRP B 195 SITE 6 AC1 22 ARG B 205 HOH B 422 SITE 1 AC2 13 SER A 88 HIS A 90 ARG A 139 SER A 147 SITE 2 AC2 13 TYR A 182 FMN A 301 HOH A 530 HOH A 617 SITE 3 AC2 13 HOH A 619 SER B 18 HIS B 203 HOH B 485 SITE 4 AC2 13 HOH B 585 SITE 1 AC3 3 GLN A 67 ARG A 69 ARG A 188 SITE 1 AC4 2 GLN A 31 ARG A 219 SITE 1 AC5 5 ARG A 57 SER A 78 GLU A 79 ILE A 80 SITE 2 AC5 5 HOH A 560 SITE 1 AC6 23 LEU A 19 TYR A 110 GLN A 117 TRP A 195 SITE 2 AC6 23 ARG A 205 HOH A 414 ARG B 73 ILE B 74 SITE 3 AC6 23 VAL B 75 VAL B 76 SER B 88 THR B 89 SITE 4 AC6 23 SER B 93 GLN B 94 LYS B 95 GLN B 152 SITE 5 AC6 23 SER B 153 NNV B 302 HOH B 416 HOH B 432 SITE 6 AC6 23 HOH B 434 HOH B 453 HOH B 488 SITE 1 AC7 10 SER A 18 LEU A 19 HIS A 203 HOH A 607 SITE 2 AC7 10 HOH A 635 SER B 88 HIS B 90 ARG B 139 SITE 3 AC7 10 SER B 147 FMN B 301 SITE 1 AC8 6 ARG B 126 ASN B 129 ARG B 178 GLU B 180 SITE 2 AC8 6 GLY B 181 HOH B 493 CRYST1 57.593 63.425 133.546 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.017363 0.000000 0.000000 0.00000 SCALE2 0.000000 0.015767 0.000000 0.00000 SCALE3 0.000000 0.000000 0.007488 0.00000