data_4HRZ # _entry.id 4HRZ # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4HRZ RCSB RCSB075846 WWPDB D_1000075846 # _pdbx_database_PDB_obs_spr.id OBSLTE _pdbx_database_PDB_obs_spr.date 2016-05-18 _pdbx_database_PDB_obs_spr.pdb_id 5IW9 _pdbx_database_PDB_obs_spr.replace_pdb_id 4HRZ _pdbx_database_PDB_obs_spr.details ? # _pdbx_database_status.status_code OBS _pdbx_database_status.entry_id 4HRZ _pdbx_database_status.recvd_initial_deposition_date 2012-10-29 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site PDBJ _pdbx_database_status.methods_development_category ? _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Browning, C.B.' 1 'Shneider, M.M.' 2 'Leiman, P.G.' 3 # _citation.id primary _citation.title 'Gp25 initiates polymerization of the T4 contractile tail sheath' _citation.journal_abbrev 'To be Published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Leiman, P.G.' 1 primary 'Browning, C.B.' 2 primary 'Kanamaru, S.' 3 primary 'Basler, M.' 4 primary 'Aksyuk, A.A.' 5 primary 'Miroshnikov, K.A.' 6 primary 'Shneider, M.M.' 7 # _cell.entry_id 4HRZ _cell.length_a 69.930 _cell.length_b 69.930 _cell.length_c 222.240 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 16 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4HRZ _symmetry.space_group_name_H-M 'P 41 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 91 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Tail lysozyme' 15255.230 2 3.2.1.17 ? ? ? 2 water nat water 18.015 74 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Sheath polymerization initiator protein gp25, Outer wedge of baseplate protein, Protein Gp25' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GSMANINKLYSDIDPEMKMDWNKDVSRSLGLRSIKNSLLGIITTRKGSRPFDPEFGCDLSDQLFENMTPLTADTVERNIE SAVRNYEPRIDKLAVNVIPVYDDYTLIVEIRFSVIDNPDDIEQIKLQLASSNRV ; _entity_poly.pdbx_seq_one_letter_code_can ;GSMANINKLYSDIDPEMKMDWNKDVSRSLGLRSIKNSLLGIITTRKGSRPFDPEFGCDLSDQLFENMTPLTADTVERNIE SAVRNYEPRIDKLAVNVIPVYDDYTLIVEIRFSVIDNPDDIEQIKLQLASSNRV ; _entity_poly.pdbx_strand_id A,B _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 MET n 1 4 ALA n 1 5 ASN n 1 6 ILE n 1 7 ASN n 1 8 LYS n 1 9 LEU n 1 10 TYR n 1 11 SER n 1 12 ASP n 1 13 ILE n 1 14 ASP n 1 15 PRO n 1 16 GLU n 1 17 MET n 1 18 LYS n 1 19 MET n 1 20 ASP n 1 21 TRP n 1 22 ASN n 1 23 LYS n 1 24 ASP n 1 25 VAL n 1 26 SER n 1 27 ARG n 1 28 SER n 1 29 LEU n 1 30 GLY n 1 31 LEU n 1 32 ARG n 1 33 SER n 1 34 ILE n 1 35 LYS n 1 36 ASN n 1 37 SER n 1 38 LEU n 1 39 LEU n 1 40 GLY n 1 41 ILE n 1 42 ILE n 1 43 THR n 1 44 THR n 1 45 ARG n 1 46 LYS n 1 47 GLY n 1 48 SER n 1 49 ARG n 1 50 PRO n 1 51 PHE n 1 52 ASP n 1 53 PRO n 1 54 GLU n 1 55 PHE n 1 56 GLY n 1 57 CYS n 1 58 ASP n 1 59 LEU n 1 60 SER n 1 61 ASP n 1 62 GLN n 1 63 LEU n 1 64 PHE n 1 65 GLU n 1 66 ASN n 1 67 MET n 1 68 THR n 1 69 PRO n 1 70 LEU n 1 71 THR n 1 72 ALA n 1 73 ASP n 1 74 THR n 1 75 VAL n 1 76 GLU n 1 77 ARG n 1 78 ASN n 1 79 ILE n 1 80 GLU n 1 81 SER n 1 82 ALA n 1 83 VAL n 1 84 ARG n 1 85 ASN n 1 86 TYR n 1 87 GLU n 1 88 PRO n 1 89 ARG n 1 90 ILE n 1 91 ASP n 1 92 LYS n 1 93 LEU n 1 94 ALA n 1 95 VAL n 1 96 ASN n 1 97 VAL n 1 98 ILE n 1 99 PRO n 1 100 VAL n 1 101 TYR n 1 102 ASP n 1 103 ASP n 1 104 TYR n 1 105 THR n 1 106 LEU n 1 107 ILE n 1 108 VAL n 1 109 GLU n 1 110 ILE n 1 111 ARG n 1 112 PHE n 1 113 SER n 1 114 VAL n 1 115 ILE n 1 116 ASP n 1 117 ASN n 1 118 PRO n 1 119 ASP n 1 120 ASP n 1 121 ILE n 1 122 GLU n 1 123 GLN n 1 124 ILE n 1 125 LYS n 1 126 LEU n 1 127 GLN n 1 128 LEU n 1 129 ALA n 1 130 SER n 1 131 SER n 1 132 ASN n 1 133 ARG n 1 134 VAL n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 25 _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacteria phage T4' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 10665 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain B834 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name 'pET-28 based' _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code VG25_BPT4 _struct_ref.pdbx_db_accession P09425 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;MANINKLYSDIDPEMKMDWNKDVSRSLGLRSIKNSLLGIITTRKGSRPFDPEFGCDLSDQLFENMTPLTADTVERNIESA VRNYEPRIDKLAVNVIPVYDDYTLIVEIRFSVIDNPDDIEQIKLQLASSNRV ; _struct_ref.pdbx_align_begin 1 _struct_ref.pdbx_db_isoform ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4HRZ A 3 ? 134 ? P09425 1 ? 132 ? 1 132 2 1 4HRZ B 3 ? 134 ? P09425 1 ? 132 ? 1 132 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4HRZ GLY A 1 ? UNP P09425 ? ? 'EXPRESSION TAG' -1 1 1 4HRZ SER A 2 ? UNP P09425 ? ? 'EXPRESSION TAG' 0 2 2 4HRZ GLY B 1 ? UNP P09425 ? ? 'EXPRESSION TAG' -1 3 2 4HRZ SER B 2 ? UNP P09425 ? ? 'EXPRESSION TAG' 0 4 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4HRZ _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 4.45 _exptl_crystal.density_percent_sol 72.38 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 291 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 6.2 _exptl_crystal_grow.pdbx_details '0.9M-1.0M MgSO4, 0.1M MES, pH 6.2, VAPOR DIFFUSION, HANGING DROP, temperature 291K' _exptl_crystal_grow.pdbx_pH_range . # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector PIXEL _diffrn_detector.type 'PSI PILATUS 6M' _diffrn_detector.pdbx_collection_date 2009-09-09 _diffrn_detector.details 'Dynamically bendable mirror' # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) monochromator' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.979 1.0 2 0.98 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'SLS BEAMLINE X06SA' _diffrn_source.pdbx_synchrotron_site SLS _diffrn_source.pdbx_synchrotron_beamline X06SA _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list '0.979, 0.98' # _reflns.entry_id 4HRZ _reflns.observed_criterion_sigma_I 2.0 _reflns.observed_criterion_sigma_F 0.0 _reflns.d_resolution_low 74.11 _reflns.d_resolution_high 2.47 _reflns.number_obs 20629 _reflns.number_all 20665 _reflns.percent_possible_obs 99.9 _reflns.pdbx_Rmerge_I_obs 0.115 _reflns.pdbx_Rsym_value 0.121 _reflns.pdbx_netI_over_sigmaI 22.6 _reflns.B_iso_Wilson_estimate 55.788 _reflns.pdbx_redundancy 22.8 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.48 _reflns_shell.d_res_low 2.6 _reflns_shell.percent_possible_all 100.0 _reflns_shell.Rmerge_I_obs 0.02189 _reflns_shell.pdbx_Rsym_value 0.02189 _reflns_shell.meanI_over_sigI_obs 2.1 _reflns_shell.pdbx_redundancy 24.8 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 2949 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_rejects ? _reflns_shell.pdbx_netI_over_sigmaI_obs ? _reflns_shell.number_possible ? _reflns_shell.Rmerge_F_all ? _reflns_shell.Rmerge_F_obs ? _reflns_shell.Rmerge_I_all ? _reflns_shell.meanI_over_sigI_all ? _reflns_shell.pdbx_Rrim_I_all ? _reflns_shell.pdbx_Rpim_I_all ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4HRZ _refine.ls_number_reflns_obs 19231 _refine.ls_number_reflns_all 20265 _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 0.10 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 69.93 _refine.ls_d_res_high 2.47 _refine.ls_percent_reflns_obs 98.18 _refine.ls_R_factor_obs 0.18247 _refine.ls_R_factor_all 0.18247 _refine.ls_R_factor_R_work 0.18079 _refine.ls_R_factor_R_free 0.21380 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.1 _refine.ls_number_reflns_R_free 1036 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.954 _refine.correlation_coeff_Fo_to_Fc_free 0.944 _refine.B_iso_mean 81.476 _refine.aniso_B[1][1] 0.17 _refine.aniso_B[2][2] 0.17 _refine.aniso_B[3][3] -0.33 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] -0.00 _refine.solvent_model_details MASK _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details 'HYDROGENS HAVE BEEN ADDED IN THE RIDING POSITIONS' _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct MAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'Engh & Huber' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.200 _refine.pdbx_overall_ESU_R_Free 0.178 _refine.overall_SU_ML 0.126 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 11.177 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1989 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 74 _refine_hist.number_atoms_total 2063 _refine_hist.d_res_high 2.47 _refine_hist.d_res_low 69.93 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.019 0.020 ? 2048 ? 'X-RAY DIFFRACTION' r_bond_other_d 0.005 0.020 ? 1961 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.997 1.986 ? 2785 ? 'X-RAY DIFFRACTION' r_angle_other_deg 1.235 3.000 ? 4533 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 6.766 5.000 ? 254 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 41.725 25.146 ? 103 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 20.786 15.000 ? 376 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20.928 15.000 ? 16 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.100 0.200 ? 320 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.009 0.021 ? 2318 ? 'X-RAY DIFFRACTION' r_gen_planes_other 0.004 0.020 ? 434 ? 'X-RAY DIFFRACTION' r_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_nbtor_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_vdw_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_hbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_refined ? ? ? ? ? 'X-RAY DIFFRACTION' r_symmetry_metal_ion_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcbond_other ? ? ? ? ? 'X-RAY DIFFRACTION' r_mcangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scbond_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_scangle_it ? ? ? ? ? 'X-RAY DIFFRACTION' r_rigid_bond_restr ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_free ? ? ? ? ? 'X-RAY DIFFRACTION' r_sphericity_bonded ? ? ? ? ? 'X-RAY DIFFRACTION' # loop_ _refine_ls_restr_ncs.dom_id _refine_ls_restr_ncs.pdbx_auth_asym_id _refine_ls_restr_ncs.pdbx_number _refine_ls_restr_ncs.rms_dev_position _refine_ls_restr_ncs.weight_position _refine_ls_restr_ncs.pdbx_type _refine_ls_restr_ncs.pdbx_ens_id _refine_ls_restr_ncs.pdbx_ordinal _refine_ls_restr_ncs.pdbx_refine_id _refine_ls_restr_ncs.ncs_model_details _refine_ls_restr_ncs.rms_dev_B_iso _refine_ls_restr_ncs.weight_B_iso 1 A 6652 0.16 0.05 'interatomic distance' 1 1 'X-RAY DIFFRACTION' ? ? ? 2 B 6652 0.16 0.05 'interatomic distance' 1 2 'X-RAY DIFFRACTION' ? ? ? # _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 2.473 _refine_ls_shell.d_res_low 2.537 _refine_ls_shell.number_reflns_R_work 1241 _refine_ls_shell.R_factor_R_work 0.227 _refine_ls_shell.percent_reflns_obs 89.12 _refine_ls_shell.R_factor_R_free 0.235 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 69 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? # loop_ _struct_ncs_dom.id _struct_ncs_dom.details _struct_ncs_dom.pdbx_ens_id 1 A 1 2 B 1 # loop_ _struct_ncs_dom_lim.dom_id _struct_ncs_dom_lim.beg_auth_asym_id _struct_ncs_dom_lim.beg_auth_seq_id _struct_ncs_dom_lim.end_auth_asym_id _struct_ncs_dom_lim.end_auth_seq_id _struct_ncs_dom_lim.pdbx_component_id _struct_ncs_dom_lim.pdbx_refine_code _struct_ncs_dom_lim.beg_label_asym_id _struct_ncs_dom_lim.beg_label_comp_id _struct_ncs_dom_lim.beg_label_seq_id _struct_ncs_dom_lim.beg_label_alt_id _struct_ncs_dom_lim.end_label_asym_id _struct_ncs_dom_lim.end_label_comp_id _struct_ncs_dom_lim.end_label_seq_id _struct_ncs_dom_lim.end_label_alt_id _struct_ncs_dom_lim.pdbx_ens_id _struct_ncs_dom_lim.selection_details 1 A 7 A 128 0 0 ? ? ? ? ? ? ? ? 1 ? 2 B 7 B 128 0 0 ? ? ? ? ? ? ? ? 1 ? # _struct_ncs_ens.id 1 _struct_ncs_ens.details ? # _struct.entry_id 4HRZ _struct.title 'Phage T4 Sheath Initiation Protein gp25' _struct.pdbx_descriptor 'Tail lysozyme (E.C.3.2.1.17)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4HRZ _struct_keywords.pdbx_keywords HYDROLASE _struct_keywords.text 'gp25-like fold, Initiation of sheath polymerization, baseplate component, T4 gp18, T4 gp53, T4 gp6, HYDROLASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 22 ? THR A 43 ? ASN A 20 THR A 41 1 ? 22 HELX_P HELX_P2 2 ASP A 61 ? ASN A 66 ? ASP A 59 ASN A 64 1 ? 6 HELX_P HELX_P3 3 LEU A 70 ? GLU A 87 ? LEU A 68 GLU A 85 1 ? 18 HELX_P HELX_P4 4 ASN B 22 ? THR B 43 ? ASN B 20 THR B 41 1 ? 22 HELX_P HELX_P5 5 SER B 60 ? ASN B 66 ? SER B 58 ASN B 64 1 ? 7 HELX_P HELX_P6 6 LEU B 70 ? GLU B 87 ? LEU B 68 GLU B 85 1 ? 18 HELX_P HELX_P7 7 TYR B 101 ? TYR B 104 ? TYR B 99 TYR B 102 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASP 14 A . ? ASP 12 A PRO 15 A ? PRO 13 A 1 -25.47 2 ASP 14 B . ? ASP 12 B PRO 15 B ? PRO 13 B 1 -9.58 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 3 ? B ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ILE A 90 ? VAL A 100 ? ILE A 88 VAL A 98 A 2 THR A 105 ? VAL A 114 ? THR A 103 VAL A 112 A 3 ASN A 117 ? LEU A 128 ? ASN A 115 LEU A 126 B 1 ILE B 90 ? VAL B 100 ? ILE B 88 VAL B 98 B 2 THR B 105 ? VAL B 114 ? THR B 103 VAL B 112 B 3 ASN B 117 ? LEU B 128 ? ASN B 115 LEU B 126 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ASN A 96 ? N ASN A 94 O GLU A 109 ? O GLU A 107 A 2 3 N PHE A 112 ? N PHE A 110 O GLU A 122 ? O GLU A 120 B 1 2 N ASN B 96 ? N ASN B 94 O GLU B 109 ? O GLU B 107 B 2 3 N PHE B 112 ? N PHE B 110 O GLU B 122 ? O GLU B 120 # _database_PDB_matrix.entry_id 4HRZ _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4HRZ _atom_sites.fract_transf_matrix[1][1] 0.014300 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] -0.000000 _atom_sites.fract_transf_matrix[2][2] 0.014300 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] -0.000000 _atom_sites.fract_transf_matrix[3][3] 0.004500 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -1 ? ? ? A . n A 1 2 SER 2 0 ? ? ? A . n A 1 3 MET 3 1 ? ? ? A . n A 1 4 ALA 4 2 ? ? ? A . n A 1 5 ASN 5 3 ? ? ? A . n A 1 6 ILE 6 4 ? ? ? A . n A 1 7 ASN 7 5 5 ASN ASN A . n A 1 8 LYS 8 6 6 LYS LYS A . n A 1 9 LEU 9 7 7 LEU LEU A . n A 1 10 TYR 10 8 8 TYR TYR A . n A 1 11 SER 11 9 9 SER SER A . n A 1 12 ASP 12 10 10 ASP ASP A . n A 1 13 ILE 13 11 11 ILE ILE A . n A 1 14 ASP 14 12 12 ASP ASP A . n A 1 15 PRO 15 13 13 PRO PRO A . n A 1 16 GLU 16 14 14 GLU GLU A . n A 1 17 MET 17 15 15 MET MET A . n A 1 18 LYS 18 16 16 LYS LYS A . n A 1 19 MET 19 17 17 MET MET A . n A 1 20 ASP 20 18 18 ASP ASP A . n A 1 21 TRP 21 19 19 TRP TRP A . n A 1 22 ASN 22 20 20 ASN ASN A . n A 1 23 LYS 23 21 21 LYS LYS A . n A 1 24 ASP 24 22 22 ASP ASP A . n A 1 25 VAL 25 23 23 VAL VAL A . n A 1 26 SER 26 24 24 SER SER A . n A 1 27 ARG 27 25 25 ARG ARG A . n A 1 28 SER 28 26 26 SER SER A . n A 1 29 LEU 29 27 27 LEU LEU A . n A 1 30 GLY 30 28 28 GLY GLY A . n A 1 31 LEU 31 29 29 LEU LEU A . n A 1 32 ARG 32 30 30 ARG ARG A . n A 1 33 SER 33 31 31 SER SER A . n A 1 34 ILE 34 32 32 ILE ILE A . n A 1 35 LYS 35 33 33 LYS LYS A . n A 1 36 ASN 36 34 34 ASN ASN A . n A 1 37 SER 37 35 35 SER SER A . n A 1 38 LEU 38 36 36 LEU LEU A . n A 1 39 LEU 39 37 37 LEU LEU A . n A 1 40 GLY 40 38 38 GLY GLY A . n A 1 41 ILE 41 39 39 ILE ILE A . n A 1 42 ILE 42 40 40 ILE ILE A . n A 1 43 THR 43 41 41 THR THR A . n A 1 44 THR 44 42 42 THR THR A . n A 1 45 ARG 45 43 43 ARG ARG A . n A 1 46 LYS 46 44 44 LYS LYS A . n A 1 47 GLY 47 45 45 GLY GLY A . n A 1 48 SER 48 46 46 SER SER A . n A 1 49 ARG 49 47 47 ARG ARG A . n A 1 50 PRO 50 48 48 PRO PRO A . n A 1 51 PHE 51 49 49 PHE PHE A . n A 1 52 ASP 52 50 50 ASP ASP A . n A 1 53 PRO 53 51 51 PRO PRO A . n A 1 54 GLU 54 52 52 GLU GLU A . n A 1 55 PHE 55 53 53 PHE PHE A . n A 1 56 GLY 56 54 54 GLY GLY A . n A 1 57 CYS 57 55 55 CYS CYS A . n A 1 58 ASP 58 56 56 ASP ASP A . n A 1 59 LEU 59 57 57 LEU LEU A . n A 1 60 SER 60 58 58 SER SER A . n A 1 61 ASP 61 59 59 ASP ASP A . n A 1 62 GLN 62 60 60 GLN GLN A . n A 1 63 LEU 63 61 61 LEU LEU A . n A 1 64 PHE 64 62 62 PHE PHE A . n A 1 65 GLU 65 63 63 GLU GLU A . n A 1 66 ASN 66 64 64 ASN ASN A . n A 1 67 MET 67 65 65 MET MET A . n A 1 68 THR 68 66 66 THR THR A . n A 1 69 PRO 69 67 67 PRO PRO A . n A 1 70 LEU 70 68 68 LEU LEU A . n A 1 71 THR 71 69 69 THR THR A . n A 1 72 ALA 72 70 70 ALA ALA A . n A 1 73 ASP 73 71 71 ASP ASP A . n A 1 74 THR 74 72 72 THR THR A . n A 1 75 VAL 75 73 73 VAL VAL A . n A 1 76 GLU 76 74 74 GLU GLU A . n A 1 77 ARG 77 75 75 ARG ARG A . n A 1 78 ASN 78 76 76 ASN ASN A . n A 1 79 ILE 79 77 77 ILE ILE A . n A 1 80 GLU 80 78 78 GLU GLU A . n A 1 81 SER 81 79 79 SER SER A . n A 1 82 ALA 82 80 80 ALA ALA A . n A 1 83 VAL 83 81 81 VAL VAL A . n A 1 84 ARG 84 82 82 ARG ARG A . n A 1 85 ASN 85 83 83 ASN ASN A . n A 1 86 TYR 86 84 84 TYR TYR A . n A 1 87 GLU 87 85 85 GLU GLU A . n A 1 88 PRO 88 86 86 PRO PRO A . n A 1 89 ARG 89 87 87 ARG ARG A . n A 1 90 ILE 90 88 88 ILE ILE A . n A 1 91 ASP 91 89 89 ASP ASP A . n A 1 92 LYS 92 90 90 LYS LYS A . n A 1 93 LEU 93 91 91 LEU LEU A . n A 1 94 ALA 94 92 92 ALA ALA A . n A 1 95 VAL 95 93 93 VAL VAL A . n A 1 96 ASN 96 94 94 ASN ASN A . n A 1 97 VAL 97 95 95 VAL VAL A . n A 1 98 ILE 98 96 96 ILE ILE A . n A 1 99 PRO 99 97 97 PRO PRO A . n A 1 100 VAL 100 98 98 VAL VAL A . n A 1 101 TYR 101 99 99 TYR TYR A . n A 1 102 ASP 102 100 100 ASP ASP A . n A 1 103 ASP 103 101 101 ASP ASP A . n A 1 104 TYR 104 102 102 TYR TYR A . n A 1 105 THR 105 103 103 THR THR A . n A 1 106 LEU 106 104 104 LEU LEU A . n A 1 107 ILE 107 105 105 ILE ILE A . n A 1 108 VAL 108 106 106 VAL VAL A . n A 1 109 GLU 109 107 107 GLU GLU A . n A 1 110 ILE 110 108 108 ILE ILE A . n A 1 111 ARG 111 109 109 ARG ARG A . n A 1 112 PHE 112 110 110 PHE PHE A . n A 1 113 SER 113 111 111 SER SER A . n A 1 114 VAL 114 112 112 VAL VAL A . n A 1 115 ILE 115 113 113 ILE ILE A . n A 1 116 ASP 116 114 114 ASP ASP A . n A 1 117 ASN 117 115 115 ASN ASN A . n A 1 118 PRO 118 116 116 PRO PRO A . n A 1 119 ASP 119 117 117 ASP ASP A . n A 1 120 ASP 120 118 118 ASP ASP A . n A 1 121 ILE 121 119 119 ILE ILE A . n A 1 122 GLU 122 120 120 GLU GLU A . n A 1 123 GLN 123 121 121 GLN GLN A . n A 1 124 ILE 124 122 122 ILE ILE A . n A 1 125 LYS 125 123 123 LYS LYS A . n A 1 126 LEU 126 124 124 LEU LEU A . n A 1 127 GLN 127 125 125 GLN GLN A . n A 1 128 LEU 128 126 126 LEU LEU A . n A 1 129 ALA 129 127 127 ALA ALA A . n A 1 130 SER 130 128 128 SER SER A . n A 1 131 SER 131 129 129 SER SER A . n A 1 132 ASN 132 130 ? ? ? A . n A 1 133 ARG 133 131 ? ? ? A . n A 1 134 VAL 134 132 ? ? ? A . n B 1 1 GLY 1 -1 ? ? ? B . n B 1 2 SER 2 0 ? ? ? B . n B 1 3 MET 3 1 ? ? ? B . n B 1 4 ALA 4 2 ? ? ? B . n B 1 5 ASN 5 3 ? ? ? B . n B 1 6 ILE 6 4 ? ? ? B . n B 1 7 ASN 7 5 ? ? ? B . n B 1 8 LYS 8 6 ? ? ? B . n B 1 9 LEU 9 7 7 LEU LEU B . n B 1 10 TYR 10 8 8 TYR TYR B . n B 1 11 SER 11 9 9 SER SER B . n B 1 12 ASP 12 10 10 ASP ASP B . n B 1 13 ILE 13 11 11 ILE ILE B . n B 1 14 ASP 14 12 12 ASP ASP B . n B 1 15 PRO 15 13 13 PRO PRO B . n B 1 16 GLU 16 14 14 GLU GLU B . n B 1 17 MET 17 15 15 MET MET B . n B 1 18 LYS 18 16 16 LYS LYS B . n B 1 19 MET 19 17 17 MET MET B . n B 1 20 ASP 20 18 18 ASP ASP B . n B 1 21 TRP 21 19 19 TRP TRP B . n B 1 22 ASN 22 20 20 ASN ASN B . n B 1 23 LYS 23 21 21 LYS LYS B . n B 1 24 ASP 24 22 22 ASP ASP B . n B 1 25 VAL 25 23 23 VAL VAL B . n B 1 26 SER 26 24 24 SER SER B . n B 1 27 ARG 27 25 25 ARG ARG B . n B 1 28 SER 28 26 26 SER SER B . n B 1 29 LEU 29 27 27 LEU LEU B . n B 1 30 GLY 30 28 28 GLY GLY B . n B 1 31 LEU 31 29 29 LEU LEU B . n B 1 32 ARG 32 30 30 ARG ARG B . n B 1 33 SER 33 31 31 SER SER B . n B 1 34 ILE 34 32 32 ILE ILE B . n B 1 35 LYS 35 33 33 LYS LYS B . n B 1 36 ASN 36 34 34 ASN ASN B . n B 1 37 SER 37 35 35 SER SER B . n B 1 38 LEU 38 36 36 LEU LEU B . n B 1 39 LEU 39 37 37 LEU LEU B . n B 1 40 GLY 40 38 38 GLY GLY B . n B 1 41 ILE 41 39 39 ILE ILE B . n B 1 42 ILE 42 40 40 ILE ILE B . n B 1 43 THR 43 41 41 THR THR B . n B 1 44 THR 44 42 42 THR THR B . n B 1 45 ARG 45 43 43 ARG ARG B . n B 1 46 LYS 46 44 44 LYS LYS B . n B 1 47 GLY 47 45 45 GLY GLY B . n B 1 48 SER 48 46 46 SER SER B . n B 1 49 ARG 49 47 47 ARG ARG B . n B 1 50 PRO 50 48 48 PRO PRO B . n B 1 51 PHE 51 49 49 PHE PHE B . n B 1 52 ASP 52 50 50 ASP ASP B . n B 1 53 PRO 53 51 51 PRO PRO B . n B 1 54 GLU 54 52 52 GLU GLU B . n B 1 55 PHE 55 53 53 PHE PHE B . n B 1 56 GLY 56 54 54 GLY GLY B . n B 1 57 CYS 57 55 55 CYS CYS B . n B 1 58 ASP 58 56 56 ASP ASP B . n B 1 59 LEU 59 57 57 LEU LEU B . n B 1 60 SER 60 58 58 SER SER B . n B 1 61 ASP 61 59 59 ASP ASP B . n B 1 62 GLN 62 60 60 GLN GLN B . n B 1 63 LEU 63 61 61 LEU LEU B . n B 1 64 PHE 64 62 62 PHE PHE B . n B 1 65 GLU 65 63 63 GLU GLU B . n B 1 66 ASN 66 64 64 ASN ASN B . n B 1 67 MET 67 65 65 MET MET B . n B 1 68 THR 68 66 66 THR THR B . n B 1 69 PRO 69 67 67 PRO PRO B . n B 1 70 LEU 70 68 68 LEU LEU B . n B 1 71 THR 71 69 69 THR THR B . n B 1 72 ALA 72 70 70 ALA ALA B . n B 1 73 ASP 73 71 71 ASP ASP B . n B 1 74 THR 74 72 72 THR THR B . n B 1 75 VAL 75 73 73 VAL VAL B . n B 1 76 GLU 76 74 74 GLU GLU B . n B 1 77 ARG 77 75 75 ARG ARG B . n B 1 78 ASN 78 76 76 ASN ASN B . n B 1 79 ILE 79 77 77 ILE ILE B . n B 1 80 GLU 80 78 78 GLU GLU B . n B 1 81 SER 81 79 79 SER SER B . n B 1 82 ALA 82 80 80 ALA ALA B . n B 1 83 VAL 83 81 81 VAL VAL B . n B 1 84 ARG 84 82 82 ARG ARG B . n B 1 85 ASN 85 83 83 ASN ASN B . n B 1 86 TYR 86 84 84 TYR TYR B . n B 1 87 GLU 87 85 85 GLU GLU B . n B 1 88 PRO 88 86 86 PRO PRO B . n B 1 89 ARG 89 87 87 ARG ARG B . n B 1 90 ILE 90 88 88 ILE ILE B . n B 1 91 ASP 91 89 89 ASP ASP B . n B 1 92 LYS 92 90 90 LYS LYS B . n B 1 93 LEU 93 91 91 LEU LEU B . n B 1 94 ALA 94 92 92 ALA ALA B . n B 1 95 VAL 95 93 93 VAL VAL B . n B 1 96 ASN 96 94 94 ASN ASN B . n B 1 97 VAL 97 95 95 VAL VAL B . n B 1 98 ILE 98 96 96 ILE ILE B . n B 1 99 PRO 99 97 97 PRO PRO B . n B 1 100 VAL 100 98 98 VAL VAL B . n B 1 101 TYR 101 99 99 TYR TYR B . n B 1 102 ASP 102 100 100 ASP ASP B . n B 1 103 ASP 103 101 101 ASP ASP B . n B 1 104 TYR 104 102 102 TYR TYR B . n B 1 105 THR 105 103 103 THR THR B . n B 1 106 LEU 106 104 104 LEU LEU B . n B 1 107 ILE 107 105 105 ILE ILE B . n B 1 108 VAL 108 106 106 VAL VAL B . n B 1 109 GLU 109 107 107 GLU GLU B . n B 1 110 ILE 110 108 108 ILE ILE B . n B 1 111 ARG 111 109 109 ARG ARG B . n B 1 112 PHE 112 110 110 PHE PHE B . n B 1 113 SER 113 111 111 SER SER B . n B 1 114 VAL 114 112 112 VAL VAL B . n B 1 115 ILE 115 113 113 ILE ILE B . n B 1 116 ASP 116 114 114 ASP ASP B . n B 1 117 ASN 117 115 115 ASN ASN B . n B 1 118 PRO 118 116 116 PRO PRO B . n B 1 119 ASP 119 117 117 ASP ASP B . n B 1 120 ASP 120 118 118 ASP ASP B . n B 1 121 ILE 121 119 119 ILE ILE B . n B 1 122 GLU 122 120 120 GLU GLU B . n B 1 123 GLN 123 121 121 GLN GLN B . n B 1 124 ILE 124 122 122 ILE ILE B . n B 1 125 LYS 125 123 123 LYS LYS B . n B 1 126 LEU 126 124 124 LEU LEU B . n B 1 127 GLN 127 125 125 GLN GLN B . n B 1 128 LEU 128 126 126 LEU LEU B . n B 1 129 ALA 129 127 127 ALA ALA B . n B 1 130 SER 130 128 128 SER SER B . n B 1 131 SER 131 129 129 SER SER B . n B 1 132 ASN 132 130 ? ? ? B . n B 1 133 ARG 133 131 ? ? ? B . n B 1 134 VAL 134 132 ? ? ? B . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code C 2 HOH 1 201 4 HOH HOH A . C 2 HOH 2 202 5 HOH HOH A . C 2 HOH 3 203 6 HOH HOH A . C 2 HOH 4 204 7 HOH HOH A . C 2 HOH 5 205 12 HOH HOH A . C 2 HOH 6 206 15 HOH HOH A . C 2 HOH 7 207 21 HOH HOH A . C 2 HOH 8 208 24 HOH HOH A . C 2 HOH 9 209 27 HOH HOH A . C 2 HOH 10 210 28 HOH HOH A . C 2 HOH 11 211 29 HOH HOH A . C 2 HOH 12 212 30 HOH HOH A . C 2 HOH 13 213 32 HOH HOH A . C 2 HOH 14 214 36 HOH HOH A . C 2 HOH 15 215 41 HOH HOH A . C 2 HOH 16 216 45 HOH HOH A . C 2 HOH 17 217 46 HOH HOH A . C 2 HOH 18 218 49 HOH HOH A . C 2 HOH 19 219 60 HOH HOH A . C 2 HOH 20 220 66 HOH HOH A . C 2 HOH 21 221 67 HOH HOH A . C 2 HOH 22 222 69 HOH HOH A . C 2 HOH 23 223 70 HOH HOH A . C 2 HOH 24 224 71 HOH HOH A . C 2 HOH 25 225 75 HOH HOH A . C 2 HOH 26 226 78 HOH HOH A . C 2 HOH 27 227 79 HOH HOH A . C 2 HOH 28 228 81 HOH HOH A . C 2 HOH 29 229 82 HOH HOH A . C 2 HOH 30 230 86 HOH HOH A . C 2 HOH 31 231 90 HOH HOH A . C 2 HOH 32 232 92 HOH HOH A . D 2 HOH 1 201 1 HOH HOH B . D 2 HOH 2 202 2 HOH HOH B . D 2 HOH 3 203 3 HOH HOH B . D 2 HOH 4 204 8 HOH HOH B . D 2 HOH 5 205 9 HOH HOH B . D 2 HOH 6 206 10 HOH HOH B . D 2 HOH 7 207 13 HOH HOH B . D 2 HOH 8 208 14 HOH HOH B . D 2 HOH 9 209 16 HOH HOH B . D 2 HOH 10 210 17 HOH HOH B . D 2 HOH 11 211 18 HOH HOH B . D 2 HOH 12 212 19 HOH HOH B . D 2 HOH 13 213 20 HOH HOH B . D 2 HOH 14 214 25 HOH HOH B . D 2 HOH 15 215 31 HOH HOH B . D 2 HOH 16 216 33 HOH HOH B . D 2 HOH 17 217 34 HOH HOH B . D 2 HOH 18 218 35 HOH HOH B . D 2 HOH 19 219 42 HOH HOH B . D 2 HOH 20 220 43 HOH HOH B . D 2 HOH 21 221 44 HOH HOH B . D 2 HOH 22 222 47 HOH HOH B . D 2 HOH 23 223 48 HOH HOH B . D 2 HOH 24 224 52 HOH HOH B . D 2 HOH 25 225 53 HOH HOH B . D 2 HOH 26 226 54 HOH HOH B . D 2 HOH 27 227 56 HOH HOH B . D 2 HOH 28 228 59 HOH HOH B . D 2 HOH 29 229 61 HOH HOH B . D 2 HOH 30 230 64 HOH HOH B . D 2 HOH 31 231 68 HOH HOH B . D 2 HOH 32 232 72 HOH HOH B . D 2 HOH 33 233 73 HOH HOH B . D 2 HOH 34 234 74 HOH HOH B . D 2 HOH 35 235 76 HOH HOH B . D 2 HOH 36 236 77 HOH HOH B . D 2 HOH 37 237 85 HOH HOH B . D 2 HOH 38 238 87 HOH HOH B . D 2 HOH 39 239 88 HOH HOH B . D 2 HOH 40 240 89 HOH HOH B . D 2 HOH 41 241 91 HOH HOH B . D 2 HOH 42 242 94 HOH HOH B . # loop_ _pdbx_struct_assembly.id _pdbx_struct_assembly.details _pdbx_struct_assembly.method_details _pdbx_struct_assembly.oligomeric_details _pdbx_struct_assembly.oligomeric_count 1 author_defined_assembly ? dimeric 2 2 software_defined_assembly PISA dimeric 2 3 software_defined_assembly PISA dimeric 2 # loop_ _pdbx_struct_assembly_gen.assembly_id _pdbx_struct_assembly_gen.oper_expression _pdbx_struct_assembly_gen.asym_id_list 1 1 A,B,C,D 2 1,2 A,C 3 1,3 B,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 2 'ABSA (A^2)' 3080 ? 2 MORE -24 ? 2 'SSA (A^2)' 14260 ? 3 'ABSA (A^2)' 2760 ? 3 MORE -20 ? 3 'SSA (A^2)' 13900 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 8_555 -y,-x,-z+1/4 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 55.5600000000 3 'crystal symmetry operation' 5_655 -x+1,y,-z -1.0000000000 0.0000000000 0.0000000000 69.9300000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_struct_special_symmetry.id _pdbx_struct_special_symmetry.PDB_model_num _pdbx_struct_special_symmetry.auth_asym_id _pdbx_struct_special_symmetry.auth_comp_id _pdbx_struct_special_symmetry.auth_seq_id _pdbx_struct_special_symmetry.PDB_ins_code _pdbx_struct_special_symmetry.label_asym_id _pdbx_struct_special_symmetry.label_comp_id _pdbx_struct_special_symmetry.label_seq_id 1 1 B HOH 236 ? D HOH . 2 1 B HOH 240 ? D HOH . # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-10-30 2 'Structure model' 1 1 2016-05-18 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group Other # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined 4.0470 -35.8120 25.1750 0.0981 0.5381 0.3381 -0.0734 0.0432 0.0419 7.6902 12.4802 4.4219 5.1289 -2.0634 2.5690 -0.3127 1.1078 -0.4940 0.2747 0.4520 0.4378 0.2202 -0.4191 -0.1393 'X-RAY DIFFRACTION' 2 ? refined 33.7100 -12.3990 18.6880 0.1508 0.1577 0.1091 -0.0523 0.0448 0.0394 3.6240 1.9136 3.4700 0.7362 -3.0153 -0.4757 0.3919 0.1725 0.3864 0.1780 0.0779 0.0507 -0.4260 -0.0614 -0.4698 'X-RAY DIFFRACTION' 3 ? refined 35.6770 2.6020 17.3010 0.4504 0.1226 0.4258 0.0456 0.2687 0.1338 4.1598 7.2022 3.6285 1.5634 0.3533 4.6158 0.3609 0.4190 0.6085 -0.4689 0.4033 -0.6434 -0.5365 0.0203 -0.7642 'X-RAY DIFFRACTION' 4 ? refined 26.1730 -4.2910 20.7310 0.4822 0.2171 0.3313 0.2291 0.2749 0.2547 11.5520 5.0060 4.6797 4.0187 3.9558 2.9433 0.4841 0.7548 0.4641 0.4322 0.1776 0.2246 -0.6870 -0.4191 -0.6616 'X-RAY DIFFRACTION' 5 ? refined 19.7880 -20.8630 -13.8090 0.1710 0.3876 0.4263 0.0996 -0.0421 -0.1843 7.4424 0.6518 1.7829 -1.2793 1.6084 -0.6568 0.0679 -0.0265 -0.1979 -0.0844 -0.3466 0.2023 -0.0464 0.0032 0.2787 'X-RAY DIFFRACTION' 6 ? refined 36.1890 -18.3050 18.6800 0.1769 0.1804 0.1132 -0.0634 0.0144 0.0354 1.2948 0.9679 7.2413 -0.7835 -0.2219 -1.1658 0.0522 0.0177 0.0897 0.0777 -0.0625 0.0281 0.1563 0.3566 0.0102 'X-RAY DIFFRACTION' 7 ? refined 43.0210 -29.5640 25.1060 0.1101 0.1862 0.2454 -0.0577 -0.0442 0.1612 6.2321 1.4500 1.7613 -1.1523 1.0189 -1.1969 -0.0303 -0.4039 -0.5601 0.2186 -0.0563 -0.1328 -0.1922 0.1045 0.0866 'X-RAY DIFFRACTION' 8 ? refined 39.1540 -27.6300 13.6350 0.1211 0.1322 0.1717 -0.0069 -0.0248 0.0623 11.8165 1.5035 5.4692 1.6069 5.1686 0.0089 0.2138 0.0367 -0.6880 -0.1663 -0.2690 -0.2622 -0.0073 -0.0093 0.0552 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 5 ? ? A 20 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 21 ? ? A 56 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 57 ? ? A 106 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 107 ? ? A 129 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 B 7 ? ? B 20 ? ? ? ? 'X-RAY DIFFRACTION' 6 6 B 21 ? ? B 57 ? ? ? ? 'X-RAY DIFFRACTION' 7 7 B 58 ? ? B 106 ? ? ? ? 'X-RAY DIFFRACTION' 8 8 B 107 ? ? B 129 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal SHELXS 'model building' . ? 1 REFMAC refinement 5.7.0029 ? 2 MOSFLM 'data reduction' . ? 3 SCALA 'data scaling' . ? 4 SHELXS phasing . ? 5 # loop_ _pdbx_validate_close_contact.id _pdbx_validate_close_contact.PDB_model_num _pdbx_validate_close_contact.auth_atom_id_1 _pdbx_validate_close_contact.auth_asym_id_1 _pdbx_validate_close_contact.auth_comp_id_1 _pdbx_validate_close_contact.auth_seq_id_1 _pdbx_validate_close_contact.PDB_ins_code_1 _pdbx_validate_close_contact.label_alt_id_1 _pdbx_validate_close_contact.auth_atom_id_2 _pdbx_validate_close_contact.auth_asym_id_2 _pdbx_validate_close_contact.auth_comp_id_2 _pdbx_validate_close_contact.auth_seq_id_2 _pdbx_validate_close_contact.PDB_ins_code_2 _pdbx_validate_close_contact.label_alt_id_2 _pdbx_validate_close_contact.dist 1 1 O A HOH 210 ? ? O A HOH 217 ? ? 1.96 2 1 O B HOH 239 ? ? O B HOH 241 ? ? 2.19 # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASP A 50 ? ? -155.29 82.83 2 1 ASP A 89 ? ? -93.85 -86.30 3 1 ASN A 115 ? ? -118.81 75.48 4 1 SER B 9 ? ? -154.76 20.22 5 1 ASP B 50 ? ? -153.72 84.21 6 1 LEU B 57 ? ? -119.32 70.98 7 1 ASP B 89 ? ? -94.28 -87.29 8 1 ASN B 115 ? ? -119.60 78.98 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -1 ? A GLY 1 2 1 Y 1 A SER 0 ? A SER 2 3 1 Y 1 A MET 1 ? A MET 3 4 1 Y 1 A ALA 2 ? A ALA 4 5 1 Y 1 A ASN 3 ? A ASN 5 6 1 Y 1 A ILE 4 ? A ILE 6 7 1 Y 1 A ASN 130 ? A ASN 132 8 1 Y 1 A ARG 131 ? A ARG 133 9 1 Y 1 A VAL 132 ? A VAL 134 10 1 Y 1 B GLY -1 ? B GLY 1 11 1 Y 1 B SER 0 ? B SER 2 12 1 Y 1 B MET 1 ? B MET 3 13 1 Y 1 B ALA 2 ? B ALA 4 14 1 Y 1 B ASN 3 ? B ASN 5 15 1 Y 1 B ILE 4 ? B ILE 6 16 1 Y 1 B ASN 5 ? B ASN 7 17 1 Y 1 B LYS 6 ? B LYS 8 18 1 Y 1 B ASN 130 ? B ASN 132 19 1 Y 1 B ARG 131 ? B ARG 133 20 1 Y 1 B VAL 132 ? B VAL 134 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #