data_4HSP # _entry.id 4HSP # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.365 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4HSP pdb_00004hsp 10.2210/pdb4hsp/pdb RCSB RCSB075872 ? ? WWPDB D_1000075872 ? ? # _pdbx_database_related.db_name TargetTrack _pdbx_database_related.db_id JCSG-417355 _pdbx_database_related.details . _pdbx_database_related.content_type unspecified # _pdbx_database_status.SG_entry Y _pdbx_database_status.entry_id 4HSP _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-10-30 _pdbx_database_status.status_code REL _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # _audit_author.name 'Joint Center for Structural Genomics (JCSG)' _audit_author.pdbx_ordinal 1 # _citation.id primary _citation.title 'Crystal structure of a hypothetical protein (PA4066) from Pseudomonas aeruginosa PAO1 at 2.45 A resolution' _citation.journal_abbrev 'To be published' _citation.journal_volume ? _citation.page_first ? _citation.page_last ? _citation.year ? _citation.journal_id_ASTM ? _citation.country ? _citation.journal_id_ISSN ? _citation.journal_id_CSD 0353 _citation.book_publisher ? _citation.pdbx_database_id_PubMed ? _citation.pdbx_database_id_DOI ? # _citation_author.citation_id primary _citation_author.name 'Joint Center for Structural Genomics (JCSG)' _citation_author.ordinal 1 _citation_author.identifier_ORCID ? # _cell.entry_id 4HSP _cell.length_a 119.033 _cell.length_b 119.033 _cell.length_c 60.972 _cell.angle_alpha 90.000 _cell.angle_beta 90.000 _cell.angle_gamma 120.000 _cell.pdbx_unique_axis ? _cell.Z_PDB 12 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4HSP _symmetry.Int_Tables_number 180 _symmetry.space_group_name_H-M 'P 62 2 2' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'hypothetical protein' 15974.759 1 ? ? ? ? 2 non-polymer syn 'SULFATE ION' 96.063 1 ? ? ? ? 3 non-polymer syn 1,2-ETHANEDIOL 62.068 10 ? ? ? ? 4 water nat water 18.015 69 ? ? ? ? # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer yes _entity_poly.pdbx_seq_one_letter_code ;GAPRELTWSQLIPAGAPPAPAPLPIHDLANALSEAGPAASQQSPNAPVVKALDGIEAKLPGYIVPLEISEAGLVTEFLLV PYYGACIHVPPPPSNQIVYVKTAKGVQ(MSE)DELYQPFWVEGTFKVENASSELAAAGYR(MSE)QASKVTPYEYEGG ; _entity_poly.pdbx_seq_one_letter_code_can ;GAPRELTWSQLIPAGAPPAPAPLPIHDLANALSEAGPAASQQSPNAPVVKALDGIEAKLPGYIVPLEISEAGLVTEFLLV PYYGACIHVPPPPSNQIVYVKTAKGVQMDELYQPFWVEGTFKVENASSELAAAGYRMQASKVTPYEYEGG ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier JCSG-417355 # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ALA n 1 3 PRO n 1 4 ARG n 1 5 GLU n 1 6 LEU n 1 7 THR n 1 8 TRP n 1 9 SER n 1 10 GLN n 1 11 LEU n 1 12 ILE n 1 13 PRO n 1 14 ALA n 1 15 GLY n 1 16 ALA n 1 17 PRO n 1 18 PRO n 1 19 ALA n 1 20 PRO n 1 21 ALA n 1 22 PRO n 1 23 LEU n 1 24 PRO n 1 25 ILE n 1 26 HIS n 1 27 ASP n 1 28 LEU n 1 29 ALA n 1 30 ASN n 1 31 ALA n 1 32 LEU n 1 33 SER n 1 34 GLU n 1 35 ALA n 1 36 GLY n 1 37 PRO n 1 38 ALA n 1 39 ALA n 1 40 SER n 1 41 GLN n 1 42 GLN n 1 43 SER n 1 44 PRO n 1 45 ASN n 1 46 ALA n 1 47 PRO n 1 48 VAL n 1 49 VAL n 1 50 LYS n 1 51 ALA n 1 52 LEU n 1 53 ASP n 1 54 GLY n 1 55 ILE n 1 56 GLU n 1 57 ALA n 1 58 LYS n 1 59 LEU n 1 60 PRO n 1 61 GLY n 1 62 TYR n 1 63 ILE n 1 64 VAL n 1 65 PRO n 1 66 LEU n 1 67 GLU n 1 68 ILE n 1 69 SER n 1 70 GLU n 1 71 ALA n 1 72 GLY n 1 73 LEU n 1 74 VAL n 1 75 THR n 1 76 GLU n 1 77 PHE n 1 78 LEU n 1 79 LEU n 1 80 VAL n 1 81 PRO n 1 82 TYR n 1 83 TYR n 1 84 GLY n 1 85 ALA n 1 86 CYS n 1 87 ILE n 1 88 HIS n 1 89 VAL n 1 90 PRO n 1 91 PRO n 1 92 PRO n 1 93 PRO n 1 94 SER n 1 95 ASN n 1 96 GLN n 1 97 ILE n 1 98 VAL n 1 99 TYR n 1 100 VAL n 1 101 LYS n 1 102 THR n 1 103 ALA n 1 104 LYS n 1 105 GLY n 1 106 VAL n 1 107 GLN n 1 108 MSE n 1 109 ASP n 1 110 GLU n 1 111 LEU n 1 112 TYR n 1 113 GLN n 1 114 PRO n 1 115 PHE n 1 116 TRP n 1 117 VAL n 1 118 GLU n 1 119 GLY n 1 120 THR n 1 121 PHE n 1 122 LYS n 1 123 VAL n 1 124 GLU n 1 125 ASN n 1 126 ALA n 1 127 SER n 1 128 SER n 1 129 GLU n 1 130 LEU n 1 131 ALA n 1 132 ALA n 1 133 ALA n 1 134 GLY n 1 135 TYR n 1 136 ARG n 1 137 MSE n 1 138 GLN n 1 139 ALA n 1 140 SER n 1 141 LYS n 1 142 VAL n 1 143 THR n 1 144 PRO n 1 145 TYR n 1 146 GLU n 1 147 TYR n 1 148 GLU n 1 149 GLY n 1 150 GLY n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'NP_252755.1, PA4066' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain 'ATCC 15692 / PAO1 / 1C / PRS 101 / LMG 12228' _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Pseudomonas aeruginosa' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 208964 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia Coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain PB1 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name SpeedET _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code Q9HWW2_PSEAE _struct_ref.pdbx_db_accession Q9HWW2 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;APRELTWSQLIPAGAPPAPAPLPIHDLANALSEAGPAASQQSPNAPVVKALDGIEAKLPGYIVPLEISEAGLVTEFLLVP YYGACIHVPPPPSNQIVYVKTAKGVQMDELYQPFWVEGTFKVENASSELAAAGYRMQASKVTPYEYEGG ; _struct_ref.pdbx_align_begin 24 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4HSP _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 150 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q9HWW2 _struct_ref_seq.db_align_beg 24 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 172 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 24 _struct_ref_seq.pdbx_auth_seq_align_end 172 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4HSP _struct_ref_seq_dif.mon_id GLY _struct_ref_seq_dif.pdbx_pdb_strand_id A _struct_ref_seq_dif.seq_num 1 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q9HWW2 _struct_ref_seq_dif.db_mon_id ? _struct_ref_seq_dif.pdbx_seq_db_seq_num ? _struct_ref_seq_dif.details 'expression tag' _struct_ref_seq_dif.pdbx_auth_seq_num 0 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 EDO non-polymer . 1,2-ETHANEDIOL 'ETHYLENE GLYCOL' 'C2 H6 O2' 62.068 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MSE 'L-peptide linking' n SELENOMETHIONINE ? 'C5 H11 N O2 Se' 196.106 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 SO4 non-polymer . 'SULFATE ION' ? 'O4 S -2' 96.063 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.method 'X-RAY DIFFRACTION' _exptl.entry_id 4HSP # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 3.90 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 68.48 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.pdbx_details ;0.2M sodium chloride, 2.0M ammonium sulfate, 0.1M sodium cacodylate pH 6.5, NANODROP, VAPOR DIFFUSION, SITTING DROP, temperature 277K ; _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.temp 277 _exptl_crystal_grow.method 'VAPOR DIFFUSION, SITTING DROP' _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.pH 6.5 # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details 'KOHZU: Double Crystal Si(111)' _diffrn_detector.type 'ADSC Q315' _diffrn_detector.pdbx_collection_date 2012-09-20 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Double Crystal Si(111)' _diffrn_radiation.pdbx_diffrn_protocol MAD _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_scattering_type x-ray # loop_ _diffrn_radiation_wavelength.id _diffrn_radiation_wavelength.wavelength _diffrn_radiation_wavelength.wt 1 0.979111 1.0 2 0.979338 1.0 3 0.918401 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.pdbx_synchrotron_beamline 8.2.2 _diffrn_source.type 'ALS BEAMLINE 8.2.2' _diffrn_source.pdbx_wavelength_list 0.979111,0.979338,0.918401 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_synchrotron_site ALS # _reflns.entry_id 4HSP _reflns.d_resolution_high 2.45 _reflns.d_resolution_low 29.234 _reflns.number_obs 9810 _reflns.pdbx_Rmerge_I_obs 0.086 _reflns.pdbx_netI_over_sigmaI 17.370 _reflns.percent_possible_obs 99.400 _reflns.B_iso_Wilson_estimate 69.284 _reflns.observed_criterion_sigma_I -3.000 _reflns.observed_criterion_sigma_F ? _reflns.number_all ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # loop_ _reflns_shell.d_res_high _reflns_shell.d_res_low _reflns_shell.number_measured_obs _reflns_shell.number_measured_all _reflns_shell.number_unique_obs _reflns_shell.Rmerge_I_obs _reflns_shell.meanI_over_sigI_obs _reflns_shell.pdbx_Rsym_value _reflns_shell.pdbx_chi_squared _reflns_shell.pdbx_redundancy _reflns_shell.percent_possible_obs _reflns_shell.number_unique_all _reflns_shell.percent_possible_all _reflns_shell.pdbx_ordinal _reflns_shell.pdbx_diffrn_id 2.450 2.540 11402 ? 1784 0.014 1.6 ? ? ? ? ? 96.300 1 1 2.540 2.640 13330 ? 1727 0.014 1.9 ? ? ? ? ? 99.000 2 1 2.640 2.760 13827 ? 1776 0.014 3.8 ? ? ? ? ? 99.800 3 1 2.760 2.900 13421 ? 1727 0.014 5.4 ? ? ? ? ? 99.900 4 1 2.900 3.080 13763 ? 1768 0.014 9.2 ? ? ? ? ? 100.000 5 1 3.080 3.320 14086 ? 1811 0.014 14.8 ? ? ? ? ? 100.000 6 1 3.320 3.650 13806 ? 1774 0.014 21.4 ? ? ? ? ? 100.000 7 1 3.650 4.180 14093 ? 1818 0.014 31.8 ? ? ? ? ? 100.000 8 1 4.180 5.250 13664 ? 1779 0.014 39.0 ? ? ? ? ? 100.000 9 1 5.250 ? 13932 ? 1826 0.014 43.1 ? ? ? ? ? 99.200 10 1 # _refine.ls_percent_reflns_R_free 4.8000 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4HSP _refine.aniso_B[2][3] 0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML ? _refine.pdbx_ls_sigma_I ? _refine.aniso_B[1][3] 0.0000 _refine.pdbx_stereochemistry_target_values ? _refine.aniso_B[3][3] 4.1584 _refine.occupancy_max 1.000 _refine.ls_number_restraints ? _refine.aniso_B[1][1] -2.0792 _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.1749 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct MAD _refine.solvent_model_param_ksol ? _refine.pdbx_solvent_shrinkage_radii ? _refine.correlation_coeff_Fo_to_Fc 0.9609 _refine.ls_number_reflns_R_free 469 _refine.correlation_coeff_Fo_to_Fc_free 0.9378 _refine.pdbx_ls_sigma_F 0.000 _refine.ls_percent_reflns_obs 99.8500 _refine.ls_R_factor_R_work 0.1730 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.4500 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min 34.630 _refine.occupancy_min 0.370 _refine.B_iso_mean 66.2655 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] -2.0792 _refine.B_iso_max 159.930 _refine.ls_d_res_low 29.234 _refine.pdbx_overall_phase_error ? _refine.solvent_model_details ? _refine.aniso_B[1][2] 0.0000 _refine.ls_R_factor_R_free 0.2130 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 9776 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ;1. ATOM RECORD CONTAINS SUM OF TLS AND RESIDUAL B FACTORS. 2. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U FACTORS. 3. A MET-INHIBITION PROTOCOL WAS USED FOR SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET INCORPORATION 4. EXPERIMENTAL (MAD) PHASE RESTRAINTS WERE USED DURING REFINEMENT. 5. SULFATE (SO4) AND 1,2-ETHANEDIOL (EDO) MOLECULES FROM THE CRYSTALLIZATION AND CRYOPROTECTANT SOLUTION ARE MODELED. ; _refine.ls_number_reflns_all ? _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4HSP _refine_analyze.Luzzati_coordinate_error_obs 0.386 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1117 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 45 _refine_hist.number_atoms_solvent 69 _refine_hist.number_atoms_total 1231 _refine_hist.d_res_high 2.4500 _refine_hist.d_res_low 29.234 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_dihedral_angle_d 510 ? ? 2.000 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes 26 ? ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes 167 ? ? 5.000 HARMONIC 'X-RAY DIFFRACTION' t_it 1192 ? ? 20.000 HARMONIC 'X-RAY DIFFRACTION' t_nbd ? ? ? ? ? 'X-RAY DIFFRACTION' t_improper_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_pseud_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion 151 ? ? 5.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_sum_occupancies ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_distance ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_angle ? ? ? ? ? 'X-RAY DIFFRACTION' t_utility_torsion ? ? ? ? ? 'X-RAY DIFFRACTION' t_ideal_dist_contact 1329 ? ? 4.000 SEMIHARMONIC 'X-RAY DIFFRACTION' t_bond_d 1192 0.010 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 1619 1.190 ? 2.000 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion ? 3.690 ? ? ? 'X-RAY DIFFRACTION' t_other_torsion ? 2.780 ? ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 2.4500 _refine_ls_shell.d_res_low 2.7400 _refine_ls_shell.pdbx_total_number_of_bins_used 5 _refine_ls_shell.percent_reflns_obs 99.8500 _refine_ls_shell.number_reflns_R_work 2552 _refine_ls_shell.R_factor_all 0.2211 _refine_ls_shell.R_factor_R_work 0.2173 _refine_ls_shell.R_factor_R_free 0.2981 _refine_ls_shell.percent_reflns_R_free 5.0600 _refine_ls_shell.number_reflns_R_free 136 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2688 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.title 'Crystal structure of a DUF3299 family protein (PA4066) from Pseudomonas aeruginosa PAO1 at 2.45 A resolution' _struct.entry_id 4HSP _struct.pdbx_model_type_details ? _struct.pdbx_model_details ? _struct.pdbx_CASP_flag Y # _struct_keywords.pdbx_keywords 'STRUCTURAL GENOMICS, UNKNOWN FUNCTION' _struct_keywords.text ;PF11736 family protein, DUF3299, Structural Genomics, Joint Center for Structural Genomics, JCSG, Protein Structure Initiative, PSI-BIOLOGY, UNKNOWN FUNCTION, STRUCTURAL GENOMICS UNKNOWN FUNCTION ; _struct_keywords.entry_id 4HSP # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 3 ? E N N 3 ? F N N 3 ? G N N 3 ? H N N 3 ? I N N 3 ? J N N 3 ? K N N 3 ? L N N 3 ? M N N 4 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 THR A 7 ? ILE A 12 ? THR A 29 ILE A 34 5 ? 6 HELX_P HELX_P2 2 ILE A 25 ? ALA A 35 ? ILE A 47 ALA A 57 1 ? 11 HELX_P HELX_P3 3 VAL A 49 ? ASP A 53 ? VAL A 71 ASP A 75 5 ? 5 HELX_P HELX_P4 4 PRO A 93 ? GLN A 96 ? PRO A 115 GLN A 118 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role covale1 covale both ? A GLN 107 C ? ? ? 1_555 A MSE 108 N ? ? A GLN 129 A MSE 130 1_555 ? ? ? ? ? ? ? 1.363 ? ? covale2 covale both ? A MSE 108 C ? ? ? 1_555 A ASP 109 N ? ? A MSE 130 A ASP 131 1_555 ? ? ? ? ? ? ? 1.355 ? ? covale3 covale both ? A ARG 136 C ? ? ? 1_555 A MSE 137 N ? ? A ARG 158 A MSE 159 1_555 ? ? ? ? ? ? ? 1.327 ? ? covale4 covale both ? A MSE 137 C ? ? ? 1_555 A GLN 138 N ? ? A MSE 159 A GLN 160 1_555 ? ? ? ? ? ? ? 1.322 ? ? # _struct_conn_type.id covale _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 2 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 ARG A 4 ? GLU A 5 ? ARG A 26 GLU A 27 A 2 ILE A 55 ? ILE A 68 ? ILE A 77 ILE A 90 A 3 PHE A 115 ? LYS A 122 ? PHE A 137 LYS A 144 A 4 TYR A 135 ? PRO A 144 ? TYR A 157 PRO A 166 A 5 VAL A 98 ? GLN A 107 ? VAL A 120 GLN A 129 A 6 LEU A 73 ? VAL A 80 ? LEU A 95 VAL A 102 A 7 ILE A 55 ? ILE A 68 ? ILE A 77 ILE A 90 B 1 ALA A 126 ? SER A 127 ? ALA A 148 SER A 149 B 2 ALA A 132 ? ALA A 133 ? ALA A 154 ALA A 155 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N ARG A 4 ? N ARG A 26 O GLU A 56 ? O GLU A 78 A 2 3 N ILE A 55 ? N ILE A 77 O PHE A 121 ? O PHE A 143 A 3 4 N TRP A 116 ? N TRP A 138 O THR A 143 ? O THR A 165 A 4 5 O TYR A 135 ? O TYR A 157 N TYR A 99 ? N TYR A 121 A 5 6 O VAL A 106 ? O VAL A 128 N VAL A 74 ? N VAL A 96 A 6 7 O GLU A 76 ? O GLU A 98 N LEU A 66 ? N LEU A 88 B 1 2 N ALA A 126 ? N ALA A 148 O ALA A 133 ? O ALA A 155 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software A SO4 201 ? 8 'BINDING SITE FOR RESIDUE SO4 A 201' AC2 Software A EDO 202 ? 4 'BINDING SITE FOR RESIDUE EDO A 202' AC3 Software A EDO 203 ? 2 'BINDING SITE FOR RESIDUE EDO A 203' AC4 Software A EDO 204 ? 3 'BINDING SITE FOR RESIDUE EDO A 204' AC5 Software A EDO 205 ? 4 'BINDING SITE FOR RESIDUE EDO A 205' AC6 Software A EDO 206 ? 4 'BINDING SITE FOR RESIDUE EDO A 206' AC7 Software A EDO 207 ? 4 'BINDING SITE FOR RESIDUE EDO A 207' AC8 Software A EDO 208 ? 3 'BINDING SITE FOR RESIDUE EDO A 208' AC9 Software A EDO 209 ? 4 'BINDING SITE FOR RESIDUE EDO A 209' BC1 Software A EDO 210 ? 6 'BINDING SITE FOR RESIDUE EDO A 210' BC2 Software A EDO 211 ? 3 'BINDING SITE FOR RESIDUE EDO A 211' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 8 ARG A 4 ? ARG A 26 . ? 1_555 ? 2 AC1 8 ARG A 4 ? ARG A 26 . ? 10_665 ? 3 AC1 8 ILE A 55 ? ILE A 77 . ? 10_665 ? 4 AC1 8 ILE A 55 ? ILE A 77 . ? 1_555 ? 5 AC1 8 GLU A 56 ? GLU A 78 . ? 1_555 ? 6 AC1 8 GLU A 56 ? GLU A 78 . ? 10_665 ? 7 AC1 8 HOH M . ? HOH A 356 . ? 10_665 ? 8 AC1 8 HOH M . ? HOH A 356 . ? 1_555 ? 9 AC2 4 ARG A 4 ? ARG A 26 . ? 1_555 ? 10 AC2 4 GLU A 5 ? GLU A 27 . ? 1_555 ? 11 AC2 4 GLN A 10 ? GLN A 32 . ? 1_555 ? 12 AC2 4 HOH M . ? HOH A 365 . ? 1_555 ? 13 AC3 2 GLU A 5 ? GLU A 27 . ? 1_555 ? 14 AC3 2 GLN A 10 ? GLN A 32 . ? 1_555 ? 15 AC4 3 PRO A 13 ? PRO A 35 . ? 1_555 ? 16 AC4 3 ALA A 14 ? ALA A 36 . ? 1_555 ? 17 AC4 3 HOH M . ? HOH A 324 . ? 1_555 ? 18 AC5 4 TYR A 99 ? TYR A 121 . ? 1_555 ? 19 AC5 4 ALA A 126 ? ALA A 148 . ? 1_555 ? 20 AC5 4 SER A 127 ? SER A 149 . ? 1_555 ? 21 AC5 4 ARG A 136 ? ARG A 158 . ? 1_555 ? 22 AC6 4 SER A 9 ? SER A 31 . ? 1_555 ? 23 AC6 4 GLN A 10 ? GLN A 32 . ? 1_555 ? 24 AC6 4 ILE A 12 ? ILE A 34 . ? 1_555 ? 25 AC6 4 EDO L . ? EDO A 211 . ? 1_555 ? 26 AC7 4 ALA A 14 ? ALA A 36 . ? 1_555 ? 27 AC7 4 GLY A 15 ? GLY A 37 . ? 1_555 ? 28 AC7 4 HOH M . ? HOH A 306 . ? 1_555 ? 29 AC7 4 HOH M . ? HOH A 369 . ? 1_555 ? 30 AC8 3 PRO A 17 ? PRO A 39 . ? 10_664 ? 31 AC8 3 GLN A 42 ? GLN A 64 . ? 1_555 ? 32 AC8 3 HOH M . ? HOH A 313 . ? 1_555 ? 33 AC9 4 TYR A 99 ? TYR A 121 . ? 1_555 ? 34 AC9 4 LYS A 101 ? LYS A 123 . ? 1_555 ? 35 AC9 4 ARG A 136 ? ARG A 158 . ? 1_555 ? 36 AC9 4 GLN A 138 ? GLN A 160 . ? 1_555 ? 37 BC1 6 ALA A 38 ? ALA A 60 . ? 10_664 ? 38 BC1 6 ASN A 45 ? ASN A 67 . ? 1_555 ? 39 BC1 6 ALA A 46 ? ALA A 68 . ? 1_555 ? 40 BC1 6 ASN A 125 ? ASN A 147 . ? 1_555 ? 41 BC1 6 HOH M . ? HOH A 323 . ? 1_555 ? 42 BC1 6 HOH M . ? HOH A 364 . ? 1_555 ? 43 BC2 3 THR A 7 ? THR A 29 . ? 1_555 ? 44 BC2 3 SER A 9 ? SER A 31 . ? 1_555 ? 45 BC2 3 EDO G . ? EDO A 206 . ? 1_555 ? # _atom_sites.entry_id 4HSP _atom_sites.fract_transf_matrix[1][1] 0.008401 _atom_sites.fract_transf_matrix[1][2] 0.004850 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.009701 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.016401 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S SE # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 0 0 GLY GLY A . n A 1 2 ALA 2 24 24 ALA ALA A . n A 1 3 PRO 3 25 25 PRO PRO A . n A 1 4 ARG 4 26 26 ARG ARG A . n A 1 5 GLU 5 27 27 GLU GLU A . n A 1 6 LEU 6 28 28 LEU LEU A . n A 1 7 THR 7 29 29 THR THR A . n A 1 8 TRP 8 30 30 TRP TRP A . n A 1 9 SER 9 31 31 SER SER A . n A 1 10 GLN 10 32 32 GLN GLN A . n A 1 11 LEU 11 33 33 LEU LEU A . n A 1 12 ILE 12 34 34 ILE ILE A . n A 1 13 PRO 13 35 35 PRO PRO A . n A 1 14 ALA 14 36 36 ALA ALA A . n A 1 15 GLY 15 37 37 GLY GLY A . n A 1 16 ALA 16 38 38 ALA ALA A . n A 1 17 PRO 17 39 39 PRO PRO A . n A 1 18 PRO 18 40 40 PRO PRO A . n A 1 19 ALA 19 41 41 ALA ALA A . n A 1 20 PRO 20 42 42 PRO PRO A . n A 1 21 ALA 21 43 43 ALA ALA A . n A 1 22 PRO 22 44 44 PRO PRO A . n A 1 23 LEU 23 45 45 LEU LEU A . n A 1 24 PRO 24 46 46 PRO PRO A . n A 1 25 ILE 25 47 47 ILE ILE A . n A 1 26 HIS 26 48 48 HIS HIS A . n A 1 27 ASP 27 49 49 ASP ASP A . n A 1 28 LEU 28 50 50 LEU LEU A . n A 1 29 ALA 29 51 51 ALA ALA A . n A 1 30 ASN 30 52 52 ASN ASN A . n A 1 31 ALA 31 53 53 ALA ALA A . n A 1 32 LEU 32 54 54 LEU LEU A . n A 1 33 SER 33 55 55 SER SER A . n A 1 34 GLU 34 56 56 GLU GLU A . n A 1 35 ALA 35 57 57 ALA ALA A . n A 1 36 GLY 36 58 58 GLY GLY A . n A 1 37 PRO 37 59 59 PRO PRO A . n A 1 38 ALA 38 60 60 ALA ALA A . n A 1 39 ALA 39 61 61 ALA ALA A . n A 1 40 SER 40 62 62 SER SER A . n A 1 41 GLN 41 63 63 GLN GLN A . n A 1 42 GLN 42 64 64 GLN GLN A . n A 1 43 SER 43 65 65 SER SER A . n A 1 44 PRO 44 66 66 PRO PRO A . n A 1 45 ASN 45 67 67 ASN ASN A . n A 1 46 ALA 46 68 68 ALA ALA A . n A 1 47 PRO 47 69 69 PRO PRO A . n A 1 48 VAL 48 70 70 VAL VAL A . n A 1 49 VAL 49 71 71 VAL VAL A . n A 1 50 LYS 50 72 72 LYS LYS A . n A 1 51 ALA 51 73 73 ALA ALA A . n A 1 52 LEU 52 74 74 LEU LEU A . n A 1 53 ASP 53 75 75 ASP ASP A . n A 1 54 GLY 54 76 76 GLY GLY A . n A 1 55 ILE 55 77 77 ILE ILE A . n A 1 56 GLU 56 78 78 GLU GLU A . n A 1 57 ALA 57 79 79 ALA ALA A . n A 1 58 LYS 58 80 80 LYS LYS A . n A 1 59 LEU 59 81 81 LEU LEU A . n A 1 60 PRO 60 82 82 PRO PRO A . n A 1 61 GLY 61 83 83 GLY GLY A . n A 1 62 TYR 62 84 84 TYR TYR A . n A 1 63 ILE 63 85 85 ILE ILE A . n A 1 64 VAL 64 86 86 VAL VAL A . n A 1 65 PRO 65 87 87 PRO PRO A . n A 1 66 LEU 66 88 88 LEU LEU A . n A 1 67 GLU 67 89 89 GLU GLU A . n A 1 68 ILE 68 90 90 ILE ILE A . n A 1 69 SER 69 91 91 SER SER A . n A 1 70 GLU 70 92 92 GLU GLU A . n A 1 71 ALA 71 93 93 ALA ALA A . n A 1 72 GLY 72 94 94 GLY GLY A . n A 1 73 LEU 73 95 95 LEU LEU A . n A 1 74 VAL 74 96 96 VAL VAL A . n A 1 75 THR 75 97 97 THR THR A . n A 1 76 GLU 76 98 98 GLU GLU A . n A 1 77 PHE 77 99 99 PHE PHE A . n A 1 78 LEU 78 100 100 LEU LEU A . n A 1 79 LEU 79 101 101 LEU LEU A . n A 1 80 VAL 80 102 102 VAL VAL A . n A 1 81 PRO 81 103 103 PRO PRO A . n A 1 82 TYR 82 104 104 TYR TYR A . n A 1 83 TYR 83 105 105 TYR TYR A . n A 1 84 GLY 84 106 106 GLY GLY A . n A 1 85 ALA 85 107 107 ALA ALA A . n A 1 86 CYS 86 108 108 CYS CYS A . n A 1 87 ILE 87 109 109 ILE ILE A . n A 1 88 HIS 88 110 110 HIS HIS A . n A 1 89 VAL 89 111 111 VAL VAL A . n A 1 90 PRO 90 112 112 PRO PRO A . n A 1 91 PRO 91 113 113 PRO PRO A . n A 1 92 PRO 92 114 114 PRO PRO A . n A 1 93 PRO 93 115 115 PRO PRO A . n A 1 94 SER 94 116 116 SER SER A . n A 1 95 ASN 95 117 117 ASN ASN A . n A 1 96 GLN 96 118 118 GLN GLN A . n A 1 97 ILE 97 119 119 ILE ILE A . n A 1 98 VAL 98 120 120 VAL VAL A . n A 1 99 TYR 99 121 121 TYR TYR A . n A 1 100 VAL 100 122 122 VAL VAL A . n A 1 101 LYS 101 123 123 LYS LYS A . n A 1 102 THR 102 124 124 THR THR A . n A 1 103 ALA 103 125 125 ALA ALA A . n A 1 104 LYS 104 126 126 LYS LYS A . n A 1 105 GLY 105 127 127 GLY GLY A . n A 1 106 VAL 106 128 128 VAL VAL A . n A 1 107 GLN 107 129 129 GLN GLN A . n A 1 108 MSE 108 130 130 MSE MSE A . n A 1 109 ASP 109 131 131 ASP ASP A . n A 1 110 GLU 110 132 132 GLU GLU A . n A 1 111 LEU 111 133 133 LEU LEU A . n A 1 112 TYR 112 134 134 TYR TYR A . n A 1 113 GLN 113 135 135 GLN GLN A . n A 1 114 PRO 114 136 136 PRO PRO A . n A 1 115 PHE 115 137 137 PHE PHE A . n A 1 116 TRP 116 138 138 TRP TRP A . n A 1 117 VAL 117 139 139 VAL VAL A . n A 1 118 GLU 118 140 140 GLU GLU A . n A 1 119 GLY 119 141 141 GLY GLY A . n A 1 120 THR 120 142 142 THR THR A . n A 1 121 PHE 121 143 143 PHE PHE A . n A 1 122 LYS 122 144 144 LYS LYS A . n A 1 123 VAL 123 145 145 VAL VAL A . n A 1 124 GLU 124 146 146 GLU GLU A . n A 1 125 ASN 125 147 147 ASN ASN A . n A 1 126 ALA 126 148 148 ALA ALA A . n A 1 127 SER 127 149 149 SER SER A . n A 1 128 SER 128 150 150 SER SER A . n A 1 129 GLU 129 151 151 GLU GLU A . n A 1 130 LEU 130 152 152 LEU LEU A . n A 1 131 ALA 131 153 153 ALA ALA A . n A 1 132 ALA 132 154 154 ALA ALA A . n A 1 133 ALA 133 155 155 ALA ALA A . n A 1 134 GLY 134 156 156 GLY GLY A . n A 1 135 TYR 135 157 157 TYR TYR A . n A 1 136 ARG 136 158 158 ARG ARG A . n A 1 137 MSE 137 159 159 MSE MSE A . n A 1 138 GLN 138 160 160 GLN GLN A . n A 1 139 ALA 139 161 161 ALA ALA A . n A 1 140 SER 140 162 162 SER SER A . n A 1 141 LYS 141 163 163 LYS LYS A . n A 1 142 VAL 142 164 164 VAL VAL A . n A 1 143 THR 143 165 165 THR THR A . n A 1 144 PRO 144 166 166 PRO PRO A . n A 1 145 TYR 145 167 167 TYR TYR A . n A 1 146 GLU 146 168 168 GLU GLU A . n A 1 147 TYR 147 169 169 TYR TYR A . n A 1 148 GLU 148 170 170 GLU GLU A . n A 1 149 GLY 149 171 171 GLY GLY A . n A 1 150 GLY 150 172 ? ? ? A . n # _pdbx_SG_project.project_name PSI:Biology _pdbx_SG_project.full_name_of_center 'Joint Center for Structural Genomics' _pdbx_SG_project.initial_of_center JCSG _pdbx_SG_project.id 1 # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 SO4 1 201 200 SO4 SO4 A . C 3 EDO 1 202 201 EDO EDO A . D 3 EDO 1 203 202 EDO EDO A . E 3 EDO 1 204 203 EDO EDO A . F 3 EDO 1 205 204 EDO EDO A . G 3 EDO 1 206 205 EDO EDO A . H 3 EDO 1 207 206 EDO EDO A . I 3 EDO 1 208 207 EDO EDO A . J 3 EDO 1 209 208 EDO EDO A . K 3 EDO 1 210 209 EDO EDO A . L 3 EDO 1 211 211 EDO EDO A . M 4 HOH 1 301 212 HOH HOH A . M 4 HOH 2 302 213 HOH HOH A . M 4 HOH 3 303 214 HOH HOH A . M 4 HOH 4 304 215 HOH HOH A . M 4 HOH 5 305 216 HOH HOH A . M 4 HOH 6 306 217 HOH HOH A . M 4 HOH 7 307 218 HOH HOH A . M 4 HOH 8 308 219 HOH HOH A . M 4 HOH 9 309 220 HOH HOH A . M 4 HOH 10 310 221 HOH HOH A . M 4 HOH 11 311 222 HOH HOH A . M 4 HOH 12 312 223 HOH HOH A . M 4 HOH 13 313 224 HOH HOH A . M 4 HOH 14 314 225 HOH HOH A . M 4 HOH 15 315 226 HOH HOH A . M 4 HOH 16 316 227 HOH HOH A . M 4 HOH 17 317 228 HOH HOH A . M 4 HOH 18 318 229 HOH HOH A . M 4 HOH 19 319 230 HOH HOH A . M 4 HOH 20 320 231 HOH HOH A . M 4 HOH 21 321 232 HOH HOH A . M 4 HOH 22 322 233 HOH HOH A . M 4 HOH 23 323 234 HOH HOH A . M 4 HOH 24 324 235 HOH HOH A . M 4 HOH 25 325 236 HOH HOH A . M 4 HOH 26 326 237 HOH HOH A . M 4 HOH 27 327 238 HOH HOH A . M 4 HOH 28 328 239 HOH HOH A . M 4 HOH 29 329 240 HOH HOH A . M 4 HOH 30 330 241 HOH HOH A . M 4 HOH 31 331 242 HOH HOH A . M 4 HOH 32 332 243 HOH HOH A . M 4 HOH 33 333 244 HOH HOH A . M 4 HOH 34 334 245 HOH HOH A . M 4 HOH 35 335 246 HOH HOH A . M 4 HOH 36 336 247 HOH HOH A . M 4 HOH 37 337 248 HOH HOH A . M 4 HOH 38 338 249 HOH HOH A . M 4 HOH 39 339 250 HOH HOH A . M 4 HOH 40 340 251 HOH HOH A . M 4 HOH 41 341 252 HOH HOH A . M 4 HOH 42 342 253 HOH HOH A . M 4 HOH 43 343 254 HOH HOH A . M 4 HOH 44 344 255 HOH HOH A . M 4 HOH 45 345 256 HOH HOH A . M 4 HOH 46 346 257 HOH HOH A . M 4 HOH 47 347 258 HOH HOH A . M 4 HOH 48 348 259 HOH HOH A . M 4 HOH 49 349 260 HOH HOH A . M 4 HOH 50 350 261 HOH HOH A . M 4 HOH 51 351 262 HOH HOH A . M 4 HOH 52 352 263 HOH HOH A . M 4 HOH 53 353 264 HOH HOH A . M 4 HOH 54 354 265 HOH HOH A . M 4 HOH 55 355 266 HOH HOH A . M 4 HOH 56 356 267 HOH HOH A . M 4 HOH 57 357 268 HOH HOH A . M 4 HOH 58 358 269 HOH HOH A . M 4 HOH 59 359 270 HOH HOH A . M 4 HOH 60 360 271 HOH HOH A . M 4 HOH 61 361 272 HOH HOH A . M 4 HOH 62 362 273 HOH HOH A . M 4 HOH 63 363 274 HOH HOH A . M 4 HOH 64 364 275 HOH HOH A . M 4 HOH 65 365 276 HOH HOH A . M 4 HOH 66 366 277 HOH HOH A . M 4 HOH 67 367 278 HOH HOH A . M 4 HOH 68 368 279 HOH HOH A . M 4 HOH 69 369 280 HOH HOH A . # loop_ _pdbx_struct_mod_residue.id _pdbx_struct_mod_residue.label_asym_id _pdbx_struct_mod_residue.label_comp_id _pdbx_struct_mod_residue.label_seq_id _pdbx_struct_mod_residue.auth_asym_id _pdbx_struct_mod_residue.auth_comp_id _pdbx_struct_mod_residue.auth_seq_id _pdbx_struct_mod_residue.PDB_ins_code _pdbx_struct_mod_residue.parent_comp_id _pdbx_struct_mod_residue.details 1 A MSE 108 A MSE 130 ? MET SELENOMETHIONINE 2 A MSE 137 A MSE 159 ? MET SELENOMETHIONINE # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1,2,3,4 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I,J,K,L,M # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 14050 ? 1 MORE 28 ? 1 'SSA (A^2)' 27070 ? # loop_ _pdbx_struct_oper_list.id _pdbx_struct_oper_list.type _pdbx_struct_oper_list.name _pdbx_struct_oper_list.symmetry_operation _pdbx_struct_oper_list.matrix[1][1] _pdbx_struct_oper_list.matrix[1][2] _pdbx_struct_oper_list.matrix[1][3] _pdbx_struct_oper_list.vector[1] _pdbx_struct_oper_list.matrix[2][1] _pdbx_struct_oper_list.matrix[2][2] _pdbx_struct_oper_list.matrix[2][3] _pdbx_struct_oper_list.vector[2] _pdbx_struct_oper_list.matrix[3][1] _pdbx_struct_oper_list.matrix[3][2] _pdbx_struct_oper_list.matrix[3][3] _pdbx_struct_oper_list.vector[3] 1 'identity operation' 1_555 x,y,z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 2 'crystal symmetry operation' 4_655 -x+1,-y,z -1.0000000000 0.0000000000 0.0000000000 119.0330000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 1.0000000000 0.0000000000 3 'crystal symmetry operation' 8_555 x-y,-y,-z 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 4 'crystal symmetry operation' 11_655 -x+y+1,y,-z -1.0000000000 0.0000000000 0.0000000000 119.0330000000 0.0000000000 1.0000000000 0.0000000000 0.0000000000 0.0000000000 0.0000000000 -1.0000000000 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-26 2 'Structure model' 1 1 2014-12-24 3 'Structure model' 1 2 2017-11-15 4 'Structure model' 1 3 2018-01-24 5 'Structure model' 1 4 2023-02-01 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Structure summary' 2 3 'Structure model' 'Refinement description' 3 4 'Structure model' 'Database references' 4 5 'Structure model' 'Database references' 5 5 'Structure model' 'Derived calculations' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 3 'Structure model' software 2 4 'Structure model' citation_author 3 5 'Structure model' database_2 4 5 'Structure model' struct_conn 5 5 'Structure model' struct_ref_seq_dif 6 5 'Structure model' struct_site # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_citation_author.name' 2 5 'Structure model' '_database_2.pdbx_DOI' 3 5 'Structure model' '_database_2.pdbx_database_accession' 4 5 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 5 5 'Structure model' '_struct_ref_seq_dif.details' 6 5 'Structure model' '_struct_site.pdbx_auth_asym_id' 7 5 'Structure model' '_struct_site.pdbx_auth_comp_id' 8 5 'Structure model' '_struct_site.pdbx_auth_seq_id' # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 71.0428 _pdbx_refine_tls.origin_y 15.1423 _pdbx_refine_tls.origin_z 3.0875 _pdbx_refine_tls.T[1][1] 0.1530 _pdbx_refine_tls.T[2][2] -0.1731 _pdbx_refine_tls.T[3][3] -0.0551 _pdbx_refine_tls.T[1][2] 0.0861 _pdbx_refine_tls.T[1][3] -0.1574 _pdbx_refine_tls.T[2][3] -0.1196 _pdbx_refine_tls.L[1][1] 1.9790 _pdbx_refine_tls.L[2][2] 1.6508 _pdbx_refine_tls.L[3][3] 2.9795 _pdbx_refine_tls.L[1][2] -0.0732 _pdbx_refine_tls.L[1][3] -0.7740 _pdbx_refine_tls.L[2][3] 0.0638 _pdbx_refine_tls.S[1][1] -0.2712 _pdbx_refine_tls.S[2][2] 0.4828 _pdbx_refine_tls.S[3][3] -0.2116 _pdbx_refine_tls.S[1][2] -0.1791 _pdbx_refine_tls.S[1][3] -0.1735 _pdbx_refine_tls.S[2][3] -0.2601 _pdbx_refine_tls.S[2][1] 0.1265 _pdbx_refine_tls.S[3][1] 0.4982 _pdbx_refine_tls.S[3][2] 0.3689 # _pdbx_refine_tls_group.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls_group.id 1 _pdbx_refine_tls_group.refine_tls_id 1 _pdbx_refine_tls_group.beg_auth_asym_id A _pdbx_refine_tls_group.beg_auth_seq_id 0 _pdbx_refine_tls_group.end_auth_asym_id A _pdbx_refine_tls_group.end_auth_seq_id 171 _pdbx_refine_tls_group.selection_details '{ A|0 - A|171 }' _pdbx_refine_tls_group.beg_label_asym_id ? _pdbx_refine_tls_group.beg_label_seq_id ? _pdbx_refine_tls_group.end_label_asym_id ? _pdbx_refine_tls_group.end_label_seq_id ? _pdbx_refine_tls_group.selection ? # _phasing.method MAD # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MolProbity 3beta29 ? package 'D.C. & J.S. Richardson lab' molprobity@kinemage.biochem.duke.edu 'model building' http://kinemage.biochem.duke.edu/molprobity/ ? ? 2 PDB_EXTRACT 3.10 'June 10, 2010' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 SHELX . ? package 'George M. Sheldrick' gsheldr@shelx.uni-ac.gwdg.de phasing http://shelx.uni-ac.gwdg.de/SHELX/ Fortran_77 ? 4 SHARP . ? package 'Eric de La Fortelle' sharp-develop@globalphasing.com phasing http://www.globalphasing.com/sharp/ ? ? 5 XSCALE 'March 15, 2012' ? package 'Wolfgang Kabsch' ? 'data scaling' http://www.mpimf-heidelberg.mpg.de/~kabsch/xds/html_doc/xscale_program.html ? ? 6 BUSTER-TNT 2.10.0 ? program 'Gerard Bricogne' buster-develop@GlobalPhasing.com refinement http://www.globalphasing.com/buster/ ? ? 7 XDS . ? ? ? ? 'data reduction' ? ? ? 8 SHELXD . ? ? ? ? phasing ? ? ? 9 BUSTER 2.10.0 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.compound_details ? _pdbx_entry_details.sequence_details ;THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 24-172 OF THE TARGET SEQUENCE. ; _pdbx_entry_details.entry_id 4HSP _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.has_ligand_of_interest ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 ASN A 67 ? ? -141.49 48.02 2 1 CYS A 108 ? ? 86.86 -19.52 3 1 ILE A 109 ? ? -105.86 -61.58 4 1 GLU A 132 ? ? -81.44 35.14 # _pdbx_unobs_or_zero_occ_residues.id 1 _pdbx_unobs_or_zero_occ_residues.PDB_model_num 1 _pdbx_unobs_or_zero_occ_residues.polymer_flag Y _pdbx_unobs_or_zero_occ_residues.occupancy_flag 1 _pdbx_unobs_or_zero_occ_residues.auth_asym_id A _pdbx_unobs_or_zero_occ_residues.auth_comp_id GLY _pdbx_unobs_or_zero_occ_residues.auth_seq_id 172 _pdbx_unobs_or_zero_occ_residues.PDB_ins_code ? _pdbx_unobs_or_zero_occ_residues.label_asym_id A _pdbx_unobs_or_zero_occ_residues.label_comp_id GLY _pdbx_unobs_or_zero_occ_residues.label_seq_id 150 # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 'SULFATE ION' SO4 3 1,2-ETHANEDIOL EDO 4 water HOH #