HEADER RNA BINDING PROTEIN/RNA 01-NOV-12 4HT8 TITLE CRYSTAL STRUCTURE OF E COLI HFQ BOUND TO POLY(A) A7 COMPND MOL_ID: 1; COMPND 2 MOLECULE: PROTEIN HFQ; COMPND 3 CHAIN: A, B, C, D, E, F; COMPND 4 FRAGMENT: SM FOLD; COMPND 5 SYNONYM: HF-1, HOST FACTOR-I PROTEIN; COMPND 6 ENGINEERED: YES; COMPND 7 MOL_ID: 2; COMPND 8 MOLECULE: RNA (5'-R(*AP*AP*AP*AP*AP*AP*A)-3'); COMPND 9 CHAIN: I, K; COMPND 10 ENGINEERED: YES; COMPND 11 OTHER_DETAILS: A7 RNA SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 469008; SOURCE 4 STRAIN: B / BL21-DE3; SOURCE 5 GENE: B21_04001, ECBD_3862, ECD_04039, HFQ; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28A; SOURCE 11 MOL_ID: 2; SOURCE 12 SYNTHETIC: YES; SOURCE 13 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 14 ORGANISM_TAXID: 9606; SOURCE 15 OTHER_DETAILS: THIS SEQUENCE OCCURS NATURALLY IN E. COLI KEYWDS HFQ, POLY(A), SM FOLD, RNA CHAPERONE, SINGLE STRANDED RNA, KEYWDS 2 CYTOPLASMIC, RNA BINDING PROTEIN-RNA COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR W.W.WANG,L.J.WANG REVDAT 4 20-SEP-23 4HT8 1 REMARK REVDAT 3 26-JUN-13 4HT8 1 JRNL REVDAT 2 19-JUN-13 4HT8 1 JRNL REVDAT 1 17-APR-13 4HT8 0 JRNL AUTH W.WANG,L.WANG,J.WU,Q.GONG,Y.SHI JRNL TITL HFQ-BRIDGED TERNARY COMPLEX IS IMPORTANT FOR TRANSLATION JRNL TITL 2 ACTIVATION OF RPOS BY DSRA. JRNL REF NUCLEIC ACIDS RES. V. 41 5938 2013 JRNL REFN ISSN 0305-1048 JRNL PMID 23605038 JRNL DOI 10.1093/NAR/GKT276 REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 98.87 REMARK 3 DATA CUTOFF (SIGMA(F)) : 6.200 REMARK 3 COMPLETENESS FOR RANGE (%) : 98.8 REMARK 3 NUMBER OF REFLECTIONS : 32695 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.192 REMARK 3 R VALUE (WORKING SET) : 0.190 REMARK 3 FREE R VALUE : 0.231 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1651 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2294 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.92 REMARK 3 BIN R VALUE (WORKING SET) : 0.1920 REMARK 3 BIN FREE R VALUE SET COUNT : 141 REMARK 3 BIN FREE R VALUE : 0.2510 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2764 REMARK 3 NUCLEIC ACID ATOMS : 282 REMARK 3 HETEROGEN ATOMS : 0 REMARK 3 SOLVENT ATOMS : 180 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 35.00 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.15 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 1.59000 REMARK 3 B22 (A**2) : 0.13000 REMARK 3 B33 (A**2) : -1.67000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.12000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.158 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.146 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.092 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 6.709 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.952 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.929 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3197 ; 0.012 ; 0.022 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4422 ; 1.345 ; 2.086 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 375 ; 6.076 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 109 ;35.062 ;25.229 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 484 ;13.420 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 8 ;18.763 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 549 ; 0.091 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2250 ; 0.006 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1855 ; 0.611 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3029 ; 1.075 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1342 ; 1.651 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1388 ; 2.587 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 7 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 5 A 65 REMARK 3 ORIGIN FOR THE GROUP (A): 21.2948 4.3812 41.8959 REMARK 3 T TENSOR REMARK 3 T11: 0.1999 T22: 0.0093 REMARK 3 T33: 0.0880 T12: 0.0080 REMARK 3 T13: -0.0381 T23: 0.0046 REMARK 3 L TENSOR REMARK 3 L11: 1.9926 L22: 2.1649 REMARK 3 L33: 3.3403 L12: -0.5664 REMARK 3 L13: -1.4618 L23: 1.0526 REMARK 3 S TENSOR REMARK 3 S11: -0.0052 S12: -0.0688 S13: 0.0513 REMARK 3 S21: 0.2721 S22: -0.0006 S23: -0.1316 REMARK 3 S31: -0.0402 S32: 0.1435 S33: 0.0058 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 6 B 65 REMARK 3 ORIGIN FOR THE GROUP (A): 3.9691 3.1112 36.8556 REMARK 3 T TENSOR REMARK 3 T11: 0.1292 T22: 0.0923 REMARK 3 T33: 0.1215 T12: 0.0412 REMARK 3 T13: 0.0528 T23: -0.0388 REMARK 3 L TENSOR REMARK 3 L11: 4.2389 L22: 1.8210 REMARK 3 L33: 4.0071 L12: -0.9382 REMARK 3 L13: 0.0824 L23: 0.3068 REMARK 3 S TENSOR REMARK 3 S11: -0.0234 S12: -0.0209 S13: -0.0393 REMARK 3 S21: 0.2459 S22: -0.1346 S23: 0.2694 REMARK 3 S31: -0.1363 S32: -0.5153 S33: 0.1580 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : C 6 C 65 REMARK 3 ORIGIN FOR THE GROUP (A): -0.6664 -0.0199 19.3321 REMARK 3 T TENSOR REMARK 3 T11: 0.0197 T22: 0.2988 REMARK 3 T33: 0.1679 T12: 0.0353 REMARK 3 T13: -0.0078 T23: -0.1414 REMARK 3 L TENSOR REMARK 3 L11: 4.1093 L22: 2.8460 REMARK 3 L33: 6.2962 L12: -2.0239 REMARK 3 L13: 0.8036 L23: 0.9107 REMARK 3 S TENSOR REMARK 3 S11: 0.0051 S12: 0.4599 S13: -0.2758 REMARK 3 S21: 0.1026 S22: -0.4054 S23: 0.5071 REMARK 3 S31: -0.0084 S32: -0.8170 S33: 0.4003 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : D 5 D 65 REMARK 3 ORIGIN FOR THE GROUP (A): 12.3586 -3.1056 6.8276 REMARK 3 T TENSOR REMARK 3 T11: 0.0698 T22: 0.3937 REMARK 3 T33: 0.0560 T12: 0.0897 REMARK 3 T13: -0.0552 T23: -0.0724 REMARK 3 L TENSOR REMARK 3 L11: 5.0102 L22: 3.2736 REMARK 3 L33: 5.1210 L12: -0.6853 REMARK 3 L13: -2.5953 L23: 0.6876 REMARK 3 S TENSOR REMARK 3 S11: 0.0705 S12: 1.0900 S13: -0.1280 REMARK 3 S21: -0.3148 S22: -0.2329 S23: 0.2013 REMARK 3 S31: -0.0909 S32: -0.5384 S33: 0.1624 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : E 6 E 65 REMARK 3 ORIGIN FOR THE GROUP (A): 29.5797 -2.6405 11.4396 REMARK 3 T TENSOR REMARK 3 T11: 0.0503 T22: 0.2028 REMARK 3 T33: 0.0595 T12: 0.0570 REMARK 3 T13: 0.0217 T23: -0.0013 REMARK 3 L TENSOR REMARK 3 L11: 4.7186 L22: 1.7457 REMARK 3 L33: 4.1983 L12: -0.0002 REMARK 3 L13: -0.6271 L23: 0.3852 REMARK 3 S TENSOR REMARK 3 S11: 0.0991 S12: 0.5320 S13: 0.0270 REMARK 3 S21: -0.0859 S22: -0.0210 S23: -0.1408 REMARK 3 S31: -0.1353 S32: 0.3993 S33: -0.0780 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : F 6 F 65 REMARK 3 ORIGIN FOR THE GROUP (A): 34.5010 1.3479 28.9230 REMARK 3 T TENSOR REMARK 3 T11: 0.0525 T22: 0.1306 REMARK 3 T33: 0.1633 T12: 0.0102 REMARK 3 T13: -0.0361 T23: -0.0287 REMARK 3 L TENSOR REMARK 3 L11: 2.5143 L22: 3.0382 REMARK 3 L33: 6.1694 L12: 0.2683 REMARK 3 L13: 0.2049 L23: 1.4456 REMARK 3 S TENSOR REMARK 3 S11: -0.0182 S12: 0.0486 S13: 0.0538 REMARK 3 S21: 0.1018 S22: 0.2251 S23: -0.5384 REMARK 3 S31: -0.0936 S32: 0.8502 S33: -0.2069 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : I 1 I 7 REMARK 3 ORIGIN FOR THE GROUP (A): 25.2277 -12.0511 33.7127 REMARK 3 T TENSOR REMARK 3 T11: 0.2922 T22: 0.0443 REMARK 3 T33: 0.2618 T12: 0.0584 REMARK 3 T13: -0.0286 T23: -0.0149 REMARK 3 L TENSOR REMARK 3 L11: 3.4352 L22: 0.9603 REMARK 3 L33: 4.7532 L12: -0.7766 REMARK 3 L13: -2.7481 L23: 0.4430 REMARK 3 S TENSOR REMARK 3 S11: -0.1553 S12: 0.1417 S13: -0.4695 REMARK 3 S21: 0.2364 S22: -0.0824 S23: 0.0349 REMARK 3 S31: 0.5424 S32: 0.1297 S33: 0.2377 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS U VALUES : RESIDUAL ONLY REMARK 4 REMARK 4 4HT8 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 07-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000075891. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 04-FEB-10 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 7.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRF REMARK 200 BEAMLINE : BL17U REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9793 REMARK 200 MONOCHROMATOR : PLANE GRATING REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 225 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.15 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 45603 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.700 REMARK 200 RESOLUTION RANGE LOW (A) : 98.874 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 2.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.2 REMARK 200 DATA REDUNDANCY : 3.600 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05900 REMARK 200 FOR THE DATA SET : 12.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.70 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.79 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : 3.70 REMARK 200 R MERGE FOR SHELL (I) : 0.21400 REMARK 200 R SYM FOR SHELL (I) : 0.21400 REMARK 200 FOR SHELL : 3.500 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.1.4 REMARK 200 STARTING MODEL: PDB ENTRY 1HK9 REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 43.02 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.16 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 200 MM NH4AC, 100 TRIS, 26% 2 REMARK 280 -PROPANOL, PH 7.9, VAPOR DIFFUSION, HANGING DROP, TEMPERATURE REMARK 280 283K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 51.99500 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 20.35500 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 51.99500 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 20.35500 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: OCTAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: OCTAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 7550 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 16090 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -61.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B, C, D, E, F, I, K REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 ALA A 2 REMARK 465 LYS A 3 REMARK 465 GLY A 4 REMARK 465 MET B 1 REMARK 465 ALA B 2 REMARK 465 LYS B 3 REMARK 465 GLY B 4 REMARK 465 GLN B 5 REMARK 465 MET C 1 REMARK 465 ALA C 2 REMARK 465 LYS C 3 REMARK 465 GLY C 4 REMARK 465 GLN C 5 REMARK 465 MET D 1 REMARK 465 ALA D 2 REMARK 465 LYS D 3 REMARK 465 GLY D 4 REMARK 465 MET E 1 REMARK 465 ALA E 2 REMARK 465 LYS E 3 REMARK 465 GLY E 4 REMARK 465 GLN E 5 REMARK 465 MET F 1 REMARK 465 ALA F 2 REMARK 465 LYS F 3 REMARK 465 GLY F 4 REMARK 465 GLN F 5 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 5 CG CD OE1 NE2 REMARK 470 LEU A 7 CG CD1 CD2 REMARK 470 GLU A 37 CD OE1 OE2 REMARK 470 LYS A 47 CD CE NZ REMARK 470 ASN A 48 OD1 ND2 REMARK 470 THR A 49 OG1 CG2 REMARK 470 SER B 6 OG REMARK 470 LEU B 7 CD2 REMARK 470 ARG B 17 CG CD NE CZ NH1 NH2 REMARK 470 GLU B 18 CD OE1 OE2 REMARK 470 ARG B 19 CD NE CZ NH1 NH2 REMARK 470 GLN B 35 OE1 NE2 REMARK 470 LEU B 45 CD1 REMARK 470 LYS B 47 CE NZ REMARK 470 ARG C 17 NE CZ NH1 NH2 REMARK 470 ARG C 19 CD NE CZ NH1 NH2 REMARK 470 ILE C 30 CD1 REMARK 470 GLN C 35 CB CG CD OE1 NE2 REMARK 470 LEU C 45 CD2 REMARK 470 LYS C 47 CG CD CE NZ REMARK 470 ASN C 48 CG OD1 ND2 REMARK 470 THR C 49 CB OG1 CG2 REMARK 470 VAL C 50 CG1 CG2 REMARK 470 SER C 65 OG REMARK 470 GLN D 5 CG CD OE1 NE2 REMARK 470 ARG D 17 CG CD NE CZ NH1 NH2 REMARK 470 ARG D 19 CG CD NE CZ NH1 NH2 REMARK 470 LYS D 47 CG CD CE NZ REMARK 470 ASN D 48 CG OD1 ND2 REMARK 470 THR D 49 OG1 CG2 REMARK 470 VAL D 50 CB CG1 CG2 REMARK 470 SER E 6 OG REMARK 470 ARG E 17 CG CD NE CZ NH1 NH2 REMARK 470 GLU E 18 CG CD OE1 OE2 REMARK 470 ARG E 19 NE CZ NH1 NH2 REMARK 470 ARG F 17 CG CD NE CZ NH1 NH2 REMARK 470 ARG F 19 CG CD NE CZ NH1 NH2 REMARK 470 THR F 49 CB OG1 CG2 REMARK 470 VAL F 50 CG1 CG2 REMARK 470 SER F 51 OG REMARK 470 A K 2 N9 C8 N7 C5 C6 N6 N1 REMARK 470 A K 2 C2 N3 C4 REMARK 470 A K 5 N9 C8 N7 C5 C6 N6 N1 REMARK 470 A K 5 C2 N3 C4 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 101 O HOH A 114 4556 1.52 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 VAL B 50 CB - CA - C ANGL. DEV. = -13.3 DEGREES REMARK 500 A K 1 C3' - C2' - C1' ANGL. DEV. = -4.3 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 40 -157.69 -135.12 REMARK 500 ASN A 48 -106.56 -139.87 REMARK 500 ASP B 40 -158.70 -134.80 REMARK 500 ASN B 48 -105.85 -126.07 REMARK 500 ASP C 40 -155.33 -131.15 REMARK 500 ASN C 48 -135.29 -138.99 REMARK 500 ASP D 40 -156.43 -136.19 REMARK 500 ASN D 48 -117.09 -133.79 REMARK 500 ASP E 40 -157.61 -137.87 REMARK 500 ASN E 48 -105.26 -110.65 REMARK 500 ASN F 48 -100.62 -122.12 REMARK 500 REMARK 500 REMARK: NULL DBREF 4HT8 A 1 65 UNP C6ECV6 C6ECV6_ECOBD 1 65 DBREF 4HT8 B 1 65 UNP C6ECV6 C6ECV6_ECOBD 1 65 DBREF 4HT8 C 1 65 UNP C6ECV6 C6ECV6_ECOBD 1 65 DBREF 4HT8 D 1 65 UNP C6ECV6 C6ECV6_ECOBD 1 65 DBREF 4HT8 E 1 65 UNP C6ECV6 C6ECV6_ECOBD 1 65 DBREF 4HT8 F 1 65 UNP C6ECV6 C6ECV6_ECOBD 1 65 DBREF 4HT8 I 1 7 PDB 4HT8 4HT8 1 7 DBREF 4HT8 K 1 7 PDB 4HT8 4HT8 1 7 SEQRES 1 A 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 A 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 A 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 A 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 A 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 B 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 B 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 B 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 B 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 B 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 C 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 C 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 C 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 C 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 C 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 D 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 D 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 D 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 D 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 D 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 E 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 E 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 E 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 E 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 E 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 F 65 MET ALA LYS GLY GLN SER LEU GLN ASP PRO PHE LEU ASN SEQRES 2 F 65 ALA LEU ARG ARG GLU ARG VAL PRO VAL SER ILE TYR LEU SEQRES 3 F 65 VAL ASN GLY ILE LYS LEU GLN GLY GLN ILE GLU SER PHE SEQRES 4 F 65 ASP GLN PHE VAL ILE LEU LEU LYS ASN THR VAL SER GLN SEQRES 5 F 65 MET VAL TYR LYS HIS ALA ILE SER THR VAL VAL PRO SER SEQRES 1 I 7 A A A A A A A SEQRES 1 K 7 A A A A A A A FORMUL 9 HOH *180(H2 O) HELIX 1 1 LEU A 7 ARG A 19 1 13 HELIX 2 2 LEU B 7 GLU B 18 1 12 HELIX 3 3 LEU C 7 GLU C 18 1 12 HELIX 4 4 LEU D 7 GLU D 18 1 12 HELIX 5 5 LEU E 7 GLU E 18 1 12 HELIX 6 6 LEU F 7 GLU F 18 1 12 SHEET 1 A31 VAL A 22 LEU A 26 0 SHEET 2 A31 LYS A 31 PHE A 39 -1 O LEU A 32 N ILE A 24 SHEET 3 A31 VAL A 43 LYS A 47 -1 O LYS A 47 N GLN A 35 SHEET 4 A31 SER A 51 TYR A 55 -1 O VAL A 54 N ILE A 44 SHEET 5 A31 ILE F 59 PRO F 64 -1 O VAL F 62 N MET A 53 SHEET 6 A31 VAL F 22 LEU F 26 -1 N SER F 23 O VAL F 63 SHEET 7 A31 LYS F 31 PHE F 39 -1 O LEU F 32 N ILE F 24 SHEET 8 A31 VAL F 43 LYS F 47 -1 O LYS F 47 N GLN F 35 SHEET 9 A31 SER F 51 TYR F 55 -1 O VAL F 54 N ILE F 44 SHEET 10 A31 ILE E 59 PRO E 64 -1 N VAL E 62 O MET F 53 SHEET 11 A31 VAL E 22 LEU E 26 -1 N SER E 23 O VAL E 63 SHEET 12 A31 LYS E 31 PHE E 39 -1 O GLY E 34 N VAL E 22 SHEET 13 A31 VAL E 43 LYS E 47 -1 O LEU E 45 N SER E 38 SHEET 14 A31 SER E 51 TYR E 55 -1 O VAL E 54 N ILE E 44 SHEET 15 A31 ILE D 59 PRO D 64 -1 N VAL D 62 O MET E 53 SHEET 16 A31 PRO D 21 LEU D 26 -1 N TYR D 25 O SER D 60 SHEET 17 A31 LYS D 31 PHE D 39 -1 O GLY D 34 N VAL D 22 SHEET 18 A31 VAL D 43 LYS D 47 -1 O LEU D 45 N SER D 38 SHEET 19 A31 SER D 51 TYR D 55 -1 O GLN D 52 N LEU D 46 SHEET 20 A31 ILE C 59 PRO C 64 -1 N SER C 60 O TYR D 55 SHEET 21 A31 PRO C 21 LEU C 26 -1 N SER C 23 O VAL C 63 SHEET 22 A31 LYS C 31 PHE C 39 -1 O GLY C 34 N VAL C 22 SHEET 23 A31 VAL C 43 LYS C 47 -1 O LYS C 47 N GLN C 35 SHEET 24 A31 GLN C 52 TYR C 55 -1 O VAL C 54 N ILE C 44 SHEET 25 A31 ILE B 59 PRO B 64 -1 N SER B 60 O TYR C 55 SHEET 26 A31 VAL B 22 LEU B 26 -1 N SER B 23 O VAL B 63 SHEET 27 A31 LYS B 31 PHE B 39 -1 O GLY B 34 N VAL B 22 SHEET 28 A31 VAL B 43 LYS B 47 -1 O LYS B 47 N GLN B 35 SHEET 29 A31 SER B 51 TYR B 55 -1 O VAL B 54 N ILE B 44 SHEET 30 A31 ILE A 59 PRO A 64 -1 N SER A 60 O TYR B 55 SHEET 31 A31 VAL A 22 LEU A 26 -1 N SER A 23 O VAL A 63 CISPEP 1 GLN D 5 SER D 6 0 0.04 CRYST1 103.990 40.710 100.850 90.00 101.36 90.00 C 1 2 1 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009616 0.000000 0.001932 0.00000 SCALE2 0.000000 0.024564 0.000000 0.00000 SCALE3 0.000000 0.000000 0.010114 0.00000