HEADER LIGASE/LIGASE INHIBITOR 08-NOV-12 4HWO TITLE CRYSTAL STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE BOUND TO A NOVEL TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: THREONINE--TRNA LIGASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 242-642; COMPND 5 SYNONYM: THREONYL-TRNA SYNTHETASE, THRRS; COMPND 6 EC: 6.1.1.3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: THRS, B1719, JW1709; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS AMINOACYL-TRNA SYNTHETASE, PROTEIN-INHIBITOR COMPLEX, ANTIBACTERIAL, KEYWDS 2 LIGASE-LIGASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.T.HILGERS REVDAT 2 28-FEB-24 4HWO 1 REMARK SEQADV LINK REVDAT 1 18-SEP-13 4HWO 0 JRNL AUTH M.TENG,M.T.HILGERS,M.L.CUNNINGHAM,A.BORCHARDT,J.B.LOCKE, JRNL AUTH 2 S.ABRAHAM,G.HALEY,B.P.KWAN,C.HALL,G.W.HOUGH,K.J.SHAW,J.FINN JRNL TITL IDENTIFICATION OF BACTERIA-SELECTIVE THREONYL-TRNA JRNL TITL 2 SYNTHETASE SUBSTRATE INHIBITORS BY STRUCTURE-BASED DESIGN. JRNL REF J.MED.CHEM. V. 56 1748 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 23362938 JRNL DOI 10.1021/JM301756M REMARK 2 REMARK 2 RESOLUTION. 1.91 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.91 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 37.78 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 96.5 REMARK 3 NUMBER OF REFLECTIONS : 82237 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.185 REMARK 3 R VALUE (WORKING SET) : 0.184 REMARK 3 FREE R VALUE : 0.200 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4111 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.91 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.96 REMARK 3 REFLECTION IN BIN (WORKING SET) : 5065 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 89.40 REMARK 3 BIN R VALUE (WORKING SET) : 0.3060 REMARK 3 BIN FREE R VALUE SET COUNT : 242 REMARK 3 BIN FREE R VALUE : 0.3620 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6605 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 58 REMARK 3 SOLVENT ATOMS : 545 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 24.40 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.03000 REMARK 3 B22 (A**2) : -0.09000 REMARK 3 B33 (A**2) : 0.12000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.138 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.119 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.073 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.802 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.943 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6813 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9182 ; 1.527 ; 1.956 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 805 ; 6.208 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 357 ;32.696 ;23.501 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1230 ;15.447 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 62 ;16.930 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 953 ; 0.106 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5238 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 242 638 B 242 638 486 0.120 0.050 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 242 A 357 REMARK 3 ORIGIN FOR THE GROUP (A): -18.0503 -27.9927 17.3104 REMARK 3 T TENSOR REMARK 3 T11: 0.1264 T22: 0.1232 REMARK 3 T33: 0.1114 T12: 0.0020 REMARK 3 T13: -0.0040 T23: 0.0124 REMARK 3 L TENSOR REMARK 3 L11: 0.9735 L22: 0.4884 REMARK 3 L33: 0.3495 L12: 0.0736 REMARK 3 L13: -0.2117 L23: 0.0186 REMARK 3 S TENSOR REMARK 3 S11: 0.0239 S12: 0.1043 S13: 0.0417 REMARK 3 S21: -0.0018 S22: -0.0024 S23: -0.0302 REMARK 3 S31: 0.0224 S32: 0.0122 S33: -0.0215 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 358 A 373 REMARK 3 ORIGIN FOR THE GROUP (A): -23.6810 -36.6436 13.1039 REMARK 3 T TENSOR REMARK 3 T11: 0.1137 T22: 0.1406 REMARK 3 T33: 0.1255 T12: 0.0071 REMARK 3 T13: -0.0216 T23: -0.0285 REMARK 3 L TENSOR REMARK 3 L11: 2.0687 L22: 0.7967 REMARK 3 L33: 2.5080 L12: 1.1311 REMARK 3 L13: -0.7782 L23: 0.1988 REMARK 3 S TENSOR REMARK 3 S11: -0.1452 S12: 0.2281 S13: -0.1016 REMARK 3 S21: -0.0811 S22: 0.1209 S23: -0.0635 REMARK 3 S31: 0.0731 S32: -0.1582 S33: 0.0243 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 374 A 389 REMARK 3 ORIGIN FOR THE GROUP (A): -14.6023 -32.5912 19.1859 REMARK 3 T TENSOR REMARK 3 T11: 0.1237 T22: 0.1236 REMARK 3 T33: 0.1277 T12: 0.0138 REMARK 3 T13: -0.0072 T23: 0.0064 REMARK 3 L TENSOR REMARK 3 L11: 4.1017 L22: 0.7398 REMARK 3 L33: 0.5281 L12: 1.1838 REMARK 3 L13: 0.9219 L23: 0.4596 REMARK 3 S TENSOR REMARK 3 S11: -0.0159 S12: 0.0074 S13: -0.0786 REMARK 3 S21: -0.0355 S22: -0.0128 S23: -0.0454 REMARK 3 S31: -0.0003 S32: 0.0485 S33: 0.0287 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 390 A 418 REMARK 3 ORIGIN FOR THE GROUP (A): -8.0630 -38.8830 32.1223 REMARK 3 T TENSOR REMARK 3 T11: 0.1306 T22: 0.1669 REMARK 3 T33: 0.1266 T12: 0.0204 REMARK 3 T13: -0.0306 T23: 0.0350 REMARK 3 L TENSOR REMARK 3 L11: 1.5552 L22: 1.1522 REMARK 3 L33: 0.8417 L12: 1.1139 REMARK 3 L13: -1.0186 L23: -0.4951 REMARK 3 S TENSOR REMARK 3 S11: 0.0494 S12: -0.2236 S13: -0.0901 REMARK 3 S21: 0.1326 S22: -0.0936 S23: -0.1166 REMARK 3 S31: 0.0234 S32: 0.1535 S33: 0.0442 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 419 A 432 REMARK 3 ORIGIN FOR THE GROUP (A): -1.2705 -44.6280 11.5161 REMARK 3 T TENSOR REMARK 3 T11: 0.1617 T22: 0.1000 REMARK 3 T33: 0.1445 T12: 0.0325 REMARK 3 T13: 0.0081 T23: 0.0003 REMARK 3 L TENSOR REMARK 3 L11: 3.1989 L22: 1.6736 REMARK 3 L33: 2.9943 L12: 0.9786 REMARK 3 L13: -0.2409 L23: -0.8546 REMARK 3 S TENSOR REMARK 3 S11: -0.0911 S12: 0.2169 S13: -0.1664 REMARK 3 S21: -0.2428 S22: 0.1120 S23: -0.0383 REMARK 3 S31: 0.1683 S32: -0.0275 S33: -0.0209 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 433 A 465 REMARK 3 ORIGIN FOR THE GROUP (A): -1.9144 -44.9925 21.4060 REMARK 3 T TENSOR REMARK 3 T11: 0.1261 T22: 0.1270 REMARK 3 T33: 0.1365 T12: 0.0525 REMARK 3 T13: -0.0107 T23: 0.0301 REMARK 3 L TENSOR REMARK 3 L11: 0.8986 L22: 1.3372 REMARK 3 L33: 2.4406 L12: 0.0830 REMARK 3 L13: -1.1497 L23: 0.2653 REMARK 3 S TENSOR REMARK 3 S11: -0.0256 S12: -0.0672 S13: -0.0633 REMARK 3 S21: -0.0404 S22: 0.0303 S23: -0.0009 REMARK 3 S31: -0.0864 S32: 0.0710 S33: -0.0047 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 466 A 499 REMARK 3 ORIGIN FOR THE GROUP (A): -9.1747 -38.3296 19.7514 REMARK 3 T TENSOR REMARK 3 T11: 0.1258 T22: 0.1323 REMARK 3 T33: 0.1482 T12: 0.0177 REMARK 3 T13: 0.0012 T23: 0.0176 REMARK 3 L TENSOR REMARK 3 L11: 0.7730 L22: 0.6480 REMARK 3 L33: 0.3934 L12: 0.3144 REMARK 3 L13: -0.3306 L23: -0.0285 REMARK 3 S TENSOR REMARK 3 S11: -0.0143 S12: 0.0359 S13: -0.0667 REMARK 3 S21: -0.0185 S22: -0.0333 S23: -0.0792 REMARK 3 S31: 0.1088 S32: 0.0719 S33: 0.0476 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 500 A 507 REMARK 3 ORIGIN FOR THE GROUP (A): 11.6745 -22.6772 19.2435 REMARK 3 T TENSOR REMARK 3 T11: 0.0544 T22: 0.2448 REMARK 3 T33: 0.2266 T12: 0.0293 REMARK 3 T13: 0.0224 T23: 0.0338 REMARK 3 L TENSOR REMARK 3 L11: 12.6464 L22: 4.0327 REMARK 3 L33: 10.8086 L12: 6.8103 REMARK 3 L13: -0.8867 L23: 1.5033 REMARK 3 S TENSOR REMARK 3 S11: -0.2218 S12: -0.2301 S13: -0.4071 REMARK 3 S21: -0.1229 S22: 0.0880 S23: -0.1968 REMARK 3 S31: 0.0198 S32: 1.1162 S33: 0.1338 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 508 A 582 REMARK 3 ORIGIN FOR THE GROUP (A): -36.9375 -31.8797 36.7429 REMARK 3 T TENSOR REMARK 3 T11: 0.1674 T22: 0.1089 REMARK 3 T33: 0.1416 T12: -0.0049 REMARK 3 T13: 0.0311 T23: -0.0117 REMARK 3 L TENSOR REMARK 3 L11: 0.6595 L22: 0.4548 REMARK 3 L33: 0.3694 L12: -0.0296 REMARK 3 L13: -0.4705 L23: 0.0101 REMARK 3 S TENSOR REMARK 3 S11: 0.0251 S12: -0.0262 S13: -0.0091 REMARK 3 S21: 0.1237 S22: -0.0454 S23: 0.1129 REMARK 3 S31: -0.0254 S32: 0.0343 S33: 0.0203 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 583 A 601 REMARK 3 ORIGIN FOR THE GROUP (A): -45.6214 -35.2354 43.0325 REMARK 3 T TENSOR REMARK 3 T11: 0.1789 T22: 0.0941 REMARK 3 T33: 0.2023 T12: -0.0093 REMARK 3 T13: 0.1101 T23: 0.0202 REMARK 3 L TENSOR REMARK 3 L11: 2.2796 L22: 3.1722 REMARK 3 L33: 3.7411 L12: 0.1880 REMARK 3 L13: -1.4639 L23: 2.0604 REMARK 3 S TENSOR REMARK 3 S11: -0.0252 S12: -0.0106 S13: -0.0912 REMARK 3 S21: 0.3578 S22: -0.0902 S23: 0.5504 REMARK 3 S31: 0.0307 S32: -0.1212 S33: 0.1154 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 602 A 619 REMARK 3 ORIGIN FOR THE GROUP (A): -42.6595 -36.5951 50.5913 REMARK 3 T TENSOR REMARK 3 T11: 0.6116 T22: 0.1600 REMARK 3 T33: 0.2626 T12: 0.1407 REMARK 3 T13: 0.3920 T23: 0.1153 REMARK 3 L TENSOR REMARK 3 L11: 3.7808 L22: 8.0085 REMARK 3 L33: 8.5351 L12: -2.4703 REMARK 3 L13: -4.2585 L23: 7.5440 REMARK 3 S TENSOR REMARK 3 S11: -0.4977 S12: -0.5223 S13: -0.4920 REMARK 3 S21: 0.3793 S22: 0.1383 S23: 0.3744 REMARK 3 S31: 0.2491 S32: 0.4168 S33: 0.3595 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 620 A 642 REMARK 3 ORIGIN FOR THE GROUP (A): -30.9891 -32.2764 48.3900 REMARK 3 T TENSOR REMARK 3 T11: 0.2462 T22: 0.1589 REMARK 3 T33: 0.0574 T12: -0.0167 REMARK 3 T13: 0.0005 T23: -0.0116 REMARK 3 L TENSOR REMARK 3 L11: 3.8765 L22: 4.4643 REMARK 3 L33: 2.1476 L12: -2.4297 REMARK 3 L13: -1.2055 L23: 0.3036 REMARK 3 S TENSOR REMARK 3 S11: -0.1844 S12: -0.4434 S13: -0.1183 REMARK 3 S21: 0.5934 S22: 0.1167 S23: 0.1256 REMARK 3 S31: 0.0034 S32: 0.2821 S33: 0.0677 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 242 B 312 REMARK 3 ORIGIN FOR THE GROUP (A): -23.8488 -15.0415 17.4423 REMARK 3 T TENSOR REMARK 3 T11: 0.1203 T22: 0.1013 REMARK 3 T33: 0.1136 T12: 0.0077 REMARK 3 T13: 0.0139 T23: -0.0094 REMARK 3 L TENSOR REMARK 3 L11: 1.0164 L22: 0.4442 REMARK 3 L33: 0.6506 L12: -0.0122 REMARK 3 L13: 0.2419 L23: -0.1204 REMARK 3 S TENSOR REMARK 3 S11: 0.0581 S12: 0.0583 S13: -0.0293 REMARK 3 S21: 0.0348 S22: -0.0325 S23: -0.0716 REMARK 3 S31: 0.0091 S32: 0.0141 S33: -0.0257 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 313 B 326 REMARK 3 ORIGIN FOR THE GROUP (A): -29.2887 -24.7718 0.1677 REMARK 3 T TENSOR REMARK 3 T11: 0.1829 T22: 0.2219 REMARK 3 T33: 0.0807 T12: -0.0064 REMARK 3 T13: 0.0017 T23: -0.0305 REMARK 3 L TENSOR REMARK 3 L11: 2.1251 L22: 5.5494 REMARK 3 L33: 1.6914 L12: -0.1465 REMARK 3 L13: 0.6622 L23: 1.2981 REMARK 3 S TENSOR REMARK 3 S11: 0.1069 S12: 0.2885 S13: -0.1340 REMARK 3 S21: -0.5402 S22: -0.0846 S23: -0.0220 REMARK 3 S31: 0.0009 S32: -0.0880 S33: -0.0223 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 327 B 360 REMARK 3 ORIGIN FOR THE GROUP (A): -40.9319 -22.6659 17.8695 REMARK 3 T TENSOR REMARK 3 T11: 0.1279 T22: 0.1197 REMARK 3 T33: 0.1246 T12: -0.0083 REMARK 3 T13: 0.0043 T23: 0.0047 REMARK 3 L TENSOR REMARK 3 L11: 2.4538 L22: 0.2936 REMARK 3 L33: 1.3857 L12: 0.1397 REMARK 3 L13: -0.7521 L23: -0.2100 REMARK 3 S TENSOR REMARK 3 S11: 0.0154 S12: 0.0831 S13: -0.0254 REMARK 3 S21: 0.0297 S22: 0.0233 S23: 0.0782 REMARK 3 S31: 0.0967 S32: -0.1209 S33: -0.0386 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 361 B 380 REMARK 3 ORIGIN FOR THE GROUP (A): -22.3330 -10.1866 8.1912 REMARK 3 T TENSOR REMARK 3 T11: 0.1134 T22: 0.1476 REMARK 3 T33: 0.1200 T12: 0.0160 REMARK 3 T13: 0.0301 T23: 0.0227 REMARK 3 L TENSOR REMARK 3 L11: 3.0336 L22: 2.5888 REMARK 3 L33: 3.3552 L12: 2.0823 REMARK 3 L13: 1.2051 L23: 0.4994 REMARK 3 S TENSOR REMARK 3 S11: -0.1246 S12: 0.2552 S13: 0.1259 REMARK 3 S21: -0.0765 S22: 0.1337 S23: -0.0316 REMARK 3 S31: -0.1739 S32: 0.1087 S33: -0.0090 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 381 B 418 REMARK 3 ORIGIN FOR THE GROUP (A): -39.3212 -5.7127 23.8036 REMARK 3 T TENSOR REMARK 3 T11: 0.1682 T22: 0.1464 REMARK 3 T33: 0.1212 T12: 0.0348 REMARK 3 T13: 0.0280 T23: -0.0049 REMARK 3 L TENSOR REMARK 3 L11: 0.7319 L22: 1.0199 REMARK 3 L33: 0.0836 L12: 0.2211 REMARK 3 L13: -0.1587 L23: -0.1719 REMARK 3 S TENSOR REMARK 3 S11: 0.0094 S12: -0.0363 S13: 0.0500 REMARK 3 S21: 0.1399 S22: 0.0179 S23: 0.0800 REMARK 3 S31: -0.0737 S32: -0.0503 S33: -0.0273 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 419 B 445 REMARK 3 ORIGIN FOR THE GROUP (A): -47.3788 -3.6979 8.1666 REMARK 3 T TENSOR REMARK 3 T11: 0.1301 T22: 0.1435 REMARK 3 T33: 0.0861 T12: 0.0663 REMARK 3 T13: 0.0001 T23: 0.0004 REMARK 3 L TENSOR REMARK 3 L11: 1.3645 L22: 3.6890 REMARK 3 L33: 5.7279 L12: 1.0027 REMARK 3 L13: 0.8434 L23: 3.6242 REMARK 3 S TENSOR REMARK 3 S11: 0.0488 S12: 0.0668 S13: 0.0735 REMARK 3 S21: -0.2306 S22: -0.1849 S23: 0.1355 REMARK 3 S31: -0.2337 S32: -0.3684 S33: 0.1361 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 446 B 466 REMARK 3 ORIGIN FOR THE GROUP (A): -41.8854 0.4511 13.1152 REMARK 3 T TENSOR REMARK 3 T11: 0.1274 T22: 0.1108 REMARK 3 T33: 0.1157 T12: 0.0329 REMARK 3 T13: 0.0276 T23: 0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.3367 L22: 4.5412 REMARK 3 L33: 5.4073 L12: -0.4432 REMARK 3 L13: -0.2876 L23: 3.6237 REMARK 3 S TENSOR REMARK 3 S11: 0.0235 S12: 0.0133 S13: -0.0102 REMARK 3 S21: -0.1608 S22: 0.0204 S23: -0.0674 REMARK 3 S31: -0.1528 S32: 0.0570 S33: -0.0439 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 467 B 498 REMARK 3 ORIGIN FOR THE GROUP (A): -37.4423 -7.5852 13.9017 REMARK 3 T TENSOR REMARK 3 T11: 0.1208 T22: 0.1510 REMARK 3 T33: 0.1297 T12: 0.0130 REMARK 3 T13: 0.0176 T23: 0.0158 REMARK 3 L TENSOR REMARK 3 L11: 0.7731 L22: 1.0371 REMARK 3 L33: 0.3871 L12: 0.2908 REMARK 3 L13: -0.0813 L23: -0.2813 REMARK 3 S TENSOR REMARK 3 S11: 0.0073 S12: 0.1459 S13: 0.1791 REMARK 3 S21: -0.0253 S22: -0.0005 S23: 0.0787 REMARK 3 S31: -0.0795 S32: -0.1051 S33: -0.0068 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 499 B 505 REMARK 3 ORIGIN FOR THE GROUP (A): -60.8051 -22.3215 19.6731 REMARK 3 T TENSOR REMARK 3 T11: 0.1951 T22: 1.2423 REMARK 3 T33: 0.4588 T12: 0.3377 REMARK 3 T13: 0.1708 T23: 0.5361 REMARK 3 L TENSOR REMARK 3 L11: 53.2307 L22: 35.9481 REMARK 3 L33: 34.8916 L12: -18.5380 REMARK 3 L13: -38.0357 L23: 0.4969 REMARK 3 S TENSOR REMARK 3 S11: 0.4033 S12: 0.6275 S13: -0.0338 REMARK 3 S21: -0.9065 S22: 1.2035 S23: 1.9793 REMARK 3 S31: -0.5890 S32: -2.6457 S33: -1.6068 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 506 B 531 REMARK 3 ORIGIN FOR THE GROUP (A): -29.0675 -7.2209 20.1079 REMARK 3 T TENSOR REMARK 3 T11: 0.1506 T22: 0.1123 REMARK 3 T33: 0.1333 T12: 0.0175 REMARK 3 T13: 0.0142 T23: 0.0050 REMARK 3 L TENSOR REMARK 3 L11: 2.3580 L22: 0.6691 REMARK 3 L33: 0.2610 L12: 0.7644 REMARK 3 L13: -0.0581 L23: -0.1031 REMARK 3 S TENSOR REMARK 3 S11: 0.0173 S12: -0.0183 S13: 0.1292 REMARK 3 S21: -0.0045 S22: -0.0422 S23: 0.0141 REMARK 3 S31: -0.0904 S32: -0.0385 S33: 0.0249 REMARK 3 REMARK 3 TLS GROUP : 23 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 532 B 632 REMARK 3 ORIGIN FOR THE GROUP (A): -5.3678 -7.3776 41.5731 REMARK 3 T TENSOR REMARK 3 T11: 0.1606 T22: 0.1100 REMARK 3 T33: 0.1222 T12: -0.0284 REMARK 3 T13: -0.0311 T23: -0.0084 REMARK 3 L TENSOR REMARK 3 L11: 0.6967 L22: 1.4370 REMARK 3 L33: 0.7253 L12: -0.0086 REMARK 3 L13: 0.1700 L23: 0.1803 REMARK 3 S TENSOR REMARK 3 S11: -0.0148 S12: -0.0193 S13: 0.0487 REMARK 3 S21: 0.1558 S22: 0.0050 S23: -0.1073 REMARK 3 S31: 0.0484 S32: -0.0317 S33: 0.0098 REMARK 3 REMARK 3 TLS GROUP : 24 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 633 B 639 REMARK 3 ORIGIN FOR THE GROUP (A): -22.0881 -2.8963 38.6953 REMARK 3 T TENSOR REMARK 3 T11: 0.2417 T22: 0.1768 REMARK 3 T33: 0.1787 T12: -0.0776 REMARK 3 T13: 0.0663 T23: -0.0761 REMARK 3 L TENSOR REMARK 3 L11: 8.1616 L22: 4.4829 REMARK 3 L33: 12.9806 L12: -1.7585 REMARK 3 L13: 5.3281 L23: 5.0854 REMARK 3 S TENSOR REMARK 3 S11: -0.4413 S12: -0.6127 S13: -0.0867 REMARK 3 S21: -0.3592 S22: 0.3010 S23: 0.2017 REMARK 3 S31: -1.0116 S32: -0.1021 S33: 0.1403 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 4HWO COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076013. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MAR345 REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 345 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.16 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 82308 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.907 REMARK 200 RESOLUTION RANGE LOW (A) : 79.390 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 95.3 REMARK 200 DATA REDUNDANCY : 7.500 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.05500 REMARK 200 FOR THE DATA SET : 24.7000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.91 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.00 REMARK 200 COMPLETENESS FOR SHELL (%) : 82.7 REMARK 200 DATA REDUNDANCY IN SHELL : 6.50 REMARK 200 R MERGE FOR SHELL (I) : 0.22600 REMARK 200 R SYM FOR SHELL (I) : 0.22600 REMARK 200 FOR SHELL : 3.400 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: NULL REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 56.41 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.82 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, MPD, SODIUM CITRATE, PH 5.9, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 21 21 21 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X+1/2,-Y,Z+1/2 REMARK 290 3555 -X,Y+1/2,-Z+1/2 REMARK 290 4555 X+1/2,-Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 42.95000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 57.18000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 55.15000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 57.18000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 42.95000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 55.15000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4030 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 32640 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -17.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 240 REMARK 465 ALA A 241 REMARK 465 MET B 240 REMARK 465 ALA B 241 REMARK 465 LEU B 640 REMARK 465 GLU B 641 REMARK 465 GLU B 642 REMARK 465 LEU B 643 REMARK 465 GLU B 644 REMARK 465 HIS B 645 REMARK 465 HIS B 646 REMARK 465 HIS B 647 REMARK 465 HIS B 648 REMARK 465 HIS B 649 REMARK 465 HIS B 650 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLN A 639 O HOH A 1060 1.97 REMARK 500 O HOH A 973 O HOH A 1059 1.99 REMARK 500 O HOH B 1078 O HOH B 1079 2.19 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 TRP A 266 CE2 TRP A 266 CD2 0.074 REMARK 500 HIS A 337 CG HIS A 337 CD2 0.060 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ARG A 611 NE - CZ - NH1 ANGL. DEV. = 3.9 DEGREES REMARK 500 ARG A 611 NE - CZ - NH2 ANGL. DEV. = -3.2 DEGREES REMARK 500 MET B 518 CG - SD - CE ANGL. DEV. = -9.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ALA A 260 68.75 -156.91 REMARK 500 TYR A 313 11.89 -143.03 REMARK 500 CYS A 480 -88.13 -116.72 REMARK 500 ALA B 260 73.02 -159.80 REMARK 500 TYR B 313 13.54 -146.45 REMARK 500 CYS B 480 -88.40 -114.83 REMARK 500 ASN B 502 -8.87 73.29 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 334 SG REMARK 620 2 HIS A 385 NE2 99.0 REMARK 620 3 HIS A 511 ND1 104.8 92.1 REMARK 620 4 409 A 702 N7 90.2 153.8 109.3 REMARK 620 5 409 A 702 O6 149.7 82.6 105.3 77.3 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 334 SG REMARK 620 2 HIS B 385 NE2 97.8 REMARK 620 3 HIS B 511 ND1 103.5 96.7 REMARK 620 4 409 B 702 O6 145.1 85.1 110.7 REMARK 620 5 409 B 702 N7 88.2 152.5 108.0 75.1 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 409 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 409 B 702 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HWP RELATED DB: PDB REMARK 900 RELATED ID: 4HWR RELATED DB: PDB REMARK 900 RELATED ID: 4HWS RELATED DB: PDB REMARK 900 RELATED ID: 4HWT RELATED DB: PDB DBREF 4HWO A 242 642 UNP P0A8M3 SYT_ECOLI 242 642 DBREF 4HWO B 242 642 UNP P0A8M3 SYT_ECOLI 242 642 SEQADV 4HWO MET A 240 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO ALA A 241 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO LEU A 643 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO GLU A 644 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS A 645 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS A 646 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS A 647 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS A 648 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS A 649 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS A 650 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO MET B 240 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO ALA B 241 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO LEU B 643 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO GLU B 644 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS B 645 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS B 646 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS B 647 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS B 648 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS B 649 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWO HIS B 650 UNP P0A8M3 EXPRESSION TAG SEQRES 1 A 411 MET ALA ARG ASP HIS ARG LYS ILE GLY LYS GLN LEU ASP SEQRES 2 A 411 LEU TYR HIS MET GLN GLU GLU ALA PRO GLY MET VAL PHE SEQRES 3 A 411 TRP HIS ASN ASP GLY TRP THR ILE PHE ARG GLU LEU GLU SEQRES 4 A 411 VAL PHE VAL ARG SER LYS LEU LYS GLU TYR GLN TYR GLN SEQRES 5 A 411 GLU VAL LYS GLY PRO PHE MET MET ASP ARG VAL LEU TRP SEQRES 6 A 411 GLU LYS THR GLY HIS TRP ASP ASN TYR LYS ASP ALA MET SEQRES 7 A 411 PHE THR THR SER SER GLU ASN ARG GLU TYR CYS ILE LYS SEQRES 8 A 411 PRO MET ASN CYS PRO GLY HIS VAL GLN ILE PHE ASN GLN SEQRES 9 A 411 GLY LEU LYS SER TYR ARG ASP LEU PRO LEU ARG MET ALA SEQRES 10 A 411 GLU PHE GLY SER CYS HIS ARG ASN GLU PRO SER GLY SER SEQRES 11 A 411 LEU HIS GLY LEU MET ARG VAL ARG GLY PHE THR GLN ASP SEQRES 12 A 411 ASP ALA HIS ILE PHE CYS THR GLU GLU GLN ILE ARG ASP SEQRES 13 A 411 GLU VAL ASN GLY CYS ILE ARG LEU VAL TYR ASP MET TYR SEQRES 14 A 411 SER THR PHE GLY PHE GLU LYS ILE VAL VAL LYS LEU SER SEQRES 15 A 411 THR ARG PRO GLU LYS ARG ILE GLY SER ASP GLU MET TRP SEQRES 16 A 411 ASP ARG ALA GLU ALA ASP LEU ALA VAL ALA LEU GLU GLU SEQRES 17 A 411 ASN ASN ILE PRO PHE GLU TYR GLN LEU GLY GLU GLY ALA SEQRES 18 A 411 PHE TYR GLY PRO LYS ILE GLU PHE THR LEU TYR ASP CYS SEQRES 19 A 411 LEU ASP ARG ALA TRP GLN CYS GLY THR VAL GLN LEU ASP SEQRES 20 A 411 PHE SER LEU PRO SER ARG LEU SER ALA SER TYR VAL GLY SEQRES 21 A 411 GLU ASP ASN GLU ARG LYS VAL PRO VAL MET ILE HIS ARG SEQRES 22 A 411 ALA ILE LEU GLY SER MET GLU ARG PHE ILE GLY ILE LEU SEQRES 23 A 411 THR GLU GLU PHE ALA GLY PHE PHE PRO THR TRP LEU ALA SEQRES 24 A 411 PRO VAL GLN VAL VAL ILE MET ASN ILE THR ASP SER GLN SEQRES 25 A 411 SER GLU TYR VAL ASN GLU LEU THR GLN LYS LEU SER ASN SEQRES 26 A 411 ALA GLY ILE ARG VAL LYS ALA ASP LEU ARG ASN GLU LYS SEQRES 27 A 411 ILE GLY PHE LYS ILE ARG GLU HIS THR LEU ARG ARG VAL SEQRES 28 A 411 PRO TYR MET LEU VAL CYS GLY ASP LYS GLU VAL GLU SER SEQRES 29 A 411 GLY LYS VAL ALA VAL ARG THR ARG ARG GLY LYS ASP LEU SEQRES 30 A 411 GLY SER MET ASP VAL ASN GLU VAL ILE GLU LYS LEU GLN SEQRES 31 A 411 GLN GLU ILE ARG SER ARG SER LEU LYS GLN LEU GLU GLU SEQRES 32 A 411 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 411 MET ALA ARG ASP HIS ARG LYS ILE GLY LYS GLN LEU ASP SEQRES 2 B 411 LEU TYR HIS MET GLN GLU GLU ALA PRO GLY MET VAL PHE SEQRES 3 B 411 TRP HIS ASN ASP GLY TRP THR ILE PHE ARG GLU LEU GLU SEQRES 4 B 411 VAL PHE VAL ARG SER LYS LEU LYS GLU TYR GLN TYR GLN SEQRES 5 B 411 GLU VAL LYS GLY PRO PHE MET MET ASP ARG VAL LEU TRP SEQRES 6 B 411 GLU LYS THR GLY HIS TRP ASP ASN TYR LYS ASP ALA MET SEQRES 7 B 411 PHE THR THR SER SER GLU ASN ARG GLU TYR CYS ILE LYS SEQRES 8 B 411 PRO MET ASN CYS PRO GLY HIS VAL GLN ILE PHE ASN GLN SEQRES 9 B 411 GLY LEU LYS SER TYR ARG ASP LEU PRO LEU ARG MET ALA SEQRES 10 B 411 GLU PHE GLY SER CYS HIS ARG ASN GLU PRO SER GLY SER SEQRES 11 B 411 LEU HIS GLY LEU MET ARG VAL ARG GLY PHE THR GLN ASP SEQRES 12 B 411 ASP ALA HIS ILE PHE CYS THR GLU GLU GLN ILE ARG ASP SEQRES 13 B 411 GLU VAL ASN GLY CYS ILE ARG LEU VAL TYR ASP MET TYR SEQRES 14 B 411 SER THR PHE GLY PHE GLU LYS ILE VAL VAL LYS LEU SER SEQRES 15 B 411 THR ARG PRO GLU LYS ARG ILE GLY SER ASP GLU MET TRP SEQRES 16 B 411 ASP ARG ALA GLU ALA ASP LEU ALA VAL ALA LEU GLU GLU SEQRES 17 B 411 ASN ASN ILE PRO PHE GLU TYR GLN LEU GLY GLU GLY ALA SEQRES 18 B 411 PHE TYR GLY PRO LYS ILE GLU PHE THR LEU TYR ASP CYS SEQRES 19 B 411 LEU ASP ARG ALA TRP GLN CYS GLY THR VAL GLN LEU ASP SEQRES 20 B 411 PHE SER LEU PRO SER ARG LEU SER ALA SER TYR VAL GLY SEQRES 21 B 411 GLU ASP ASN GLU ARG LYS VAL PRO VAL MET ILE HIS ARG SEQRES 22 B 411 ALA ILE LEU GLY SER MET GLU ARG PHE ILE GLY ILE LEU SEQRES 23 B 411 THR GLU GLU PHE ALA GLY PHE PHE PRO THR TRP LEU ALA SEQRES 24 B 411 PRO VAL GLN VAL VAL ILE MET ASN ILE THR ASP SER GLN SEQRES 25 B 411 SER GLU TYR VAL ASN GLU LEU THR GLN LYS LEU SER ASN SEQRES 26 B 411 ALA GLY ILE ARG VAL LYS ALA ASP LEU ARG ASN GLU LYS SEQRES 27 B 411 ILE GLY PHE LYS ILE ARG GLU HIS THR LEU ARG ARG VAL SEQRES 28 B 411 PRO TYR MET LEU VAL CYS GLY ASP LYS GLU VAL GLU SER SEQRES 29 B 411 GLY LYS VAL ALA VAL ARG THR ARG ARG GLY LYS ASP LEU SEQRES 30 B 411 GLY SER MET ASP VAL ASN GLU VAL ILE GLU LYS LEU GLN SEQRES 31 B 411 GLN GLU ILE ARG SER ARG SER LEU LYS GLN LEU GLU GLU SEQRES 32 B 411 LEU GLU HIS HIS HIS HIS HIS HIS HET ZN A 701 1 HET 409 A 702 28 HET ZN B 701 1 HET 409 B 702 28 HETNAM ZN ZINC ION HETNAM 409 N-{[3-(4-AMINOQUINAZOLIN-7-YL)PHENYL]SULFONYL}-L- HETNAM 2 409 THREONINAMIDE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 409 2(C18 H19 N5 O4 S) FORMUL 7 HOH *545(H2 O) HELIX 1 1 ASP A 243 LEU A 251 1 9 HELIX 2 2 HIS A 267 TYR A 288 1 22 HELIX 3 3 ARG A 301 THR A 307 1 7 HELIX 4 4 GLY A 308 LYS A 314 1 7 HELIX 5 5 ASP A 315 MET A 317 5 3 HELIX 6 6 ASN A 333 ASN A 342 1 10 HELIX 7 7 SER A 347 LEU A 351 5 5 HELIX 8 8 PRO A 366 LEU A 370 5 5 HELIX 9 9 THR A 389 GLU A 391 5 3 HELIX 10 10 GLN A 392 PHE A 411 1 20 HELIX 11 11 SER A 430 ASN A 448 1 19 HELIX 12 12 SER A 488 LEU A 493 1 6 HELIX 13 13 MET A 518 PHE A 529 1 12 HELIX 14 14 PRO A 534 ALA A 538 5 5 HELIX 15 15 THR A 548 SER A 550 5 3 HELIX 16 16 GLN A 551 ALA A 565 1 15 HELIX 17 17 LYS A 577 ARG A 588 1 12 HELIX 18 18 GLY A 597 GLY A 604 1 8 HELIX 19 19 VAL A 621 SER A 634 1 14 HELIX 20 20 ASP B 243 LEU B 251 1 9 HELIX 21 21 HIS B 267 TYR B 288 1 22 HELIX 22 22 ARG B 301 THR B 307 1 7 HELIX 23 23 GLY B 308 LYS B 314 1 7 HELIX 24 24 ASP B 315 MET B 317 5 3 HELIX 25 25 ASN B 333 ASN B 342 1 10 HELIX 26 26 SER B 347 LEU B 351 5 5 HELIX 27 27 PRO B 366 LEU B 370 5 5 HELIX 28 28 THR B 389 GLU B 391 5 3 HELIX 29 29 GLN B 392 PHE B 411 1 20 HELIX 30 30 SER B 430 ASN B 448 1 19 HELIX 31 31 SER B 488 LEU B 493 1 6 HELIX 32 32 MET B 518 ALA B 530 1 13 HELIX 33 33 PRO B 534 ALA B 538 5 5 HELIX 34 34 THR B 548 SER B 550 5 3 HELIX 35 35 GLN B 551 ALA B 565 1 15 HELIX 36 36 LYS B 577 ARG B 588 1 12 HELIX 37 37 GLY B 597 GLY B 604 1 8 HELIX 38 38 VAL B 621 SER B 634 1 14 SHEET 1 A 2 TYR A 254 HIS A 255 0 SHEET 2 A 2 PHE A 265 TRP A 266 -1 O PHE A 265 N HIS A 255 SHEET 1 B 8 GLN A 291 GLU A 292 0 SHEET 2 B 8 LEU A 353 HIS A 362 1 O ARG A 354 N GLN A 291 SHEET 3 B 8 GLY A 378 CYS A 388 -1 O PHE A 379 N CYS A 361 SHEET 4 B 8 VAL A 508 SER A 517 -1 O VAL A 508 N CYS A 388 SHEET 5 B 8 ALA A 477 ASP A 486 -1 N ASP A 486 O MET A 509 SHEET 6 B 8 LYS A 465 TYR A 471 -1 N ILE A 466 O VAL A 483 SHEET 7 B 8 VAL A 417 SER A 421 -1 N SER A 421 O LYS A 465 SHEET 8 B 8 GLU A 453 GLN A 455 1 O GLN A 455 N LEU A 420 SHEET 1 C 3 MET A 298 ASP A 300 0 SHEET 2 C 3 ARG A 325 ILE A 329 -1 O CYS A 328 N MET A 299 SHEET 3 C 3 THR A 319 SER A 322 -1 N THR A 320 O TYR A 327 SHEET 1 D 2 TYR A 497 VAL A 498 0 SHEET 2 D 2 ARG A 504 LYS A 505 -1 O LYS A 505 N TYR A 497 SHEET 1 E 5 VAL A 569 ASP A 572 0 SHEET 2 E 5 VAL A 542 ASN A 546 1 N ILE A 544 O ASP A 572 SHEET 3 E 5 TYR A 592 CYS A 596 1 O LEU A 594 N MET A 545 SHEET 4 E 5 LYS A 605 THR A 610 -1 O ALA A 607 N VAL A 595 SHEET 5 E 5 ASP A 615 ASP A 620 -1 O GLY A 617 N VAL A 608 SHEET 1 F 2 TYR B 254 HIS B 255 0 SHEET 2 F 2 PHE B 265 TRP B 266 -1 O PHE B 265 N HIS B 255 SHEET 1 G 8 GLN B 291 GLU B 292 0 SHEET 2 G 8 LEU B 353 HIS B 362 1 O ARG B 354 N GLN B 291 SHEET 3 G 8 GLY B 378 CYS B 388 -1 O PHE B 379 N CYS B 361 SHEET 4 G 8 VAL B 508 SER B 517 -1 O VAL B 508 N CYS B 388 SHEET 5 G 8 ALA B 477 ASP B 486 -1 N GLN B 484 O HIS B 511 SHEET 6 G 8 LYS B 465 TYR B 471 -1 N ILE B 466 O VAL B 483 SHEET 7 G 8 VAL B 417 SER B 421 -1 N SER B 421 O LYS B 465 SHEET 8 G 8 GLU B 453 GLN B 455 1 O GLN B 455 N LEU B 420 SHEET 1 H 3 MET B 298 ASP B 300 0 SHEET 2 H 3 ARG B 325 ILE B 329 -1 O CYS B 328 N MET B 299 SHEET 3 H 3 THR B 319 SER B 322 -1 N THR B 320 O TYR B 327 SHEET 1 I 2 TYR B 497 VAL B 498 0 SHEET 2 I 2 ARG B 504 LYS B 505 -1 O LYS B 505 N TYR B 497 SHEET 1 J 5 VAL B 569 ASP B 572 0 SHEET 2 J 5 VAL B 542 ASN B 546 1 N ILE B 544 O ASP B 572 SHEET 3 J 5 TYR B 592 CYS B 596 1 O LEU B 594 N MET B 545 SHEET 4 J 5 LYS B 605 THR B 610 -1 O ARG B 609 N MET B 593 SHEET 5 J 5 ASP B 615 ASP B 620 -1 O MET B 619 N VAL B 606 LINK SG CYS A 334 ZN ZN A 701 1555 1555 2.38 LINK NE2 HIS A 385 ZN ZN A 701 1555 1555 2.13 LINK ND1 HIS A 511 ZN ZN A 701 1555 1555 2.18 LINK ZN ZN A 701 N7 409 A 702 1555 1555 2.12 LINK ZN ZN A 701 O6 409 A 702 1555 1555 2.16 LINK SG CYS B 334 ZN ZN B 701 1555 1555 2.40 LINK NE2 HIS B 385 ZN ZN B 701 1555 1555 2.09 LINK ND1 HIS B 511 ZN ZN B 701 1555 1555 2.16 LINK ZN ZN B 701 O6 409 B 702 1555 1555 2.15 LINK ZN ZN B 701 N7 409 B 702 1555 1555 2.20 CISPEP 1 LEU A 351 PRO A 352 0 4.48 CISPEP 2 LEU B 351 PRO B 352 0 -1.26 SITE 1 AC1 4 CYS A 334 HIS A 385 HIS A 511 409 A 702 SITE 1 AC2 21 MET A 332 CYS A 334 ARG A 363 GLU A 365 SITE 2 AC2 21 MET A 374 ARG A 375 VAL A 376 PHE A 379 SITE 3 AC2 21 GLN A 381 ASP A 383 HIS A 385 TYR A 462 SITE 4 AC2 21 LYS A 465 GLN A 479 GLN A 484 HIS A 511 SITE 5 AC2 21 GLY A 516 SER A 517 ARG A 520 ZN A 701 SITE 6 AC2 21 HOH A 829 SITE 1 AC3 4 CYS B 334 HIS B 385 HIS B 511 409 B 702 SITE 1 AC4 21 MET B 332 CYS B 334 ARG B 363 GLU B 365 SITE 2 AC4 21 MET B 374 ARG B 375 VAL B 376 PHE B 379 SITE 3 AC4 21 GLN B 381 ASP B 383 HIS B 385 TYR B 462 SITE 4 AC4 21 LYS B 465 GLN B 479 GLN B 484 HIS B 511 SITE 5 AC4 21 GLY B 516 SER B 517 ZN B 701 HOH B 826 SITE 6 AC4 21 HOH B1081 CRYST1 85.900 110.300 114.360 90.00 90.00 90.00 P 21 21 21 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011641 0.000000 0.000000 0.00000 SCALE2 0.000000 0.009066 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008744 0.00000