HEADER LIGASE/LIGASE INHIBITOR 08-NOV-12 4HWR TITLE CRYSTAL STRUCTURE OF E. COLI THREONYL-TRNA SYNTHETASE BOUND TO A NOVEL TITLE 2 INHIBITOR COMPND MOL_ID: 1; COMPND 2 MOLECULE: THREONINE--TRNA LIGASE; COMPND 3 CHAIN: A, B; COMPND 4 FRAGMENT: UNP RESIDUES 242-642; COMPND 5 SYNONYM: THREONYL-TRNA SYNTHETASE, THRRS; COMPND 6 EC: 6.1.1.3; COMPND 7 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ESCHERICHIA COLI; SOURCE 3 ORGANISM_TAXID: 83333; SOURCE 4 STRAIN: K12; SOURCE 5 GENE: THRS, B1719, JW1709; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21-AI; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET28 KEYWDS AMINOACYL-TRNA SYNTHETASE, PROTEIN-INHIBITOR COMPLEX, ANTIBACTERIAL, KEYWDS 2 LIGASE-LIGASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR M.T.HILGERS REVDAT 2 28-FEB-24 4HWR 1 REMARK SEQADV LINK REVDAT 1 18-SEP-13 4HWR 0 JRNL AUTH M.TENG,M.T.HILGERS,M.L.CUNNINGHAM,A.BORCHARDT,J.B.LOCKE, JRNL AUTH 2 S.ABRAHAM,G.HALEY,B.P.KWAN,C.HALL,G.W.HOUGH,K.J.SHAW,J.FINN JRNL TITL IDENTIFICATION OF BACTERIA-SELECTIVE THREONYL-TRNA JRNL TITL 2 SYNTHETASE SUBSTRATE INHIBITORS BY STRUCTURE-BASED DESIGN. JRNL REF J.MED.CHEM. V. 56 1748 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 23362938 JRNL DOI 10.1021/JM301756M REMARK 2 REMARK 2 RESOLUTION. 1.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.6.0117 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 43.50 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 96015 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.267 REMARK 3 R VALUE (WORKING SET) : 0.266 REMARK 3 FREE R VALUE : 0.303 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 4806 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.95 REMARK 3 REFLECTION IN BIN (WORKING SET) : 6639 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.99 REMARK 3 BIN R VALUE (WORKING SET) : 0.4500 REMARK 3 BIN FREE R VALUE SET COUNT : 346 REMARK 3 BIN FREE R VALUE : 0.4780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 6541 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 54 REMARK 3 SOLVENT ATOMS : 444 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 32.60 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.07000 REMARK 3 B22 (A**2) : -0.05000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.01000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.172 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.163 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.128 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 7.936 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.908 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.879 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 6739 ; 0.014 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 9081 ; 1.576 ; 1.959 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 799 ; 6.500 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 350 ;33.594 ;23.543 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 1222 ;16.782 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 62 ;17.289 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 947 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 5170 ; 0.008 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 24 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 241 A 274 REMARK 3 ORIGIN FOR THE GROUP (A): 39.5034 -39.9736 10.5695 REMARK 3 T TENSOR REMARK 3 T11: 0.0951 T22: 0.0822 REMARK 3 T33: 0.0688 T12: 0.0065 REMARK 3 T13: -0.0083 T23: -0.0088 REMARK 3 L TENSOR REMARK 3 L11: 0.0078 L22: 0.5561 REMARK 3 L33: 0.1089 L12: 0.0529 REMARK 3 L13: 0.0044 L23: 0.1496 REMARK 3 S TENSOR REMARK 3 S11: -0.0149 S12: -0.0023 S13: -0.0093 REMARK 3 S21: -0.0137 S22: 0.0025 S23: 0.0003 REMARK 3 S31: -0.0013 S32: 0.0367 S33: 0.0124 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 275 A 312 REMARK 3 ORIGIN FOR THE GROUP (A): 29.5164 -29.6363 29.1209 REMARK 3 T TENSOR REMARK 3 T11: 0.0668 T22: 0.0950 REMARK 3 T33: 0.0631 T12: 0.0003 REMARK 3 T13: -0.0046 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.4019 L22: 0.4471 REMARK 3 L33: 0.2850 L12: 0.1406 REMARK 3 L13: 0.2896 L23: -0.0711 REMARK 3 S TENSOR REMARK 3 S11: 0.0096 S12: -0.0336 S13: 0.0132 REMARK 3 S21: 0.0220 S22: -0.0219 S23: 0.0211 REMARK 3 S31: -0.0119 S32: -0.0140 S33: 0.0122 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 313 A 326 REMARK 3 ORIGIN FOR THE GROUP (A): 47.1729 -28.5683 36.0209 REMARK 3 T TENSOR REMARK 3 T11: 0.1156 T22: 0.0965 REMARK 3 T33: 0.0634 T12: -0.0240 REMARK 3 T13: -0.0295 T23: -0.0164 REMARK 3 L TENSOR REMARK 3 L11: 0.1001 L22: 1.7152 REMARK 3 L33: 0.3186 L12: 0.2421 REMARK 3 L13: -0.1237 L23: 0.0453 REMARK 3 S TENSOR REMARK 3 S11: 0.0533 S12: 0.0126 S13: 0.0017 REMARK 3 S21: -0.0177 S22: -0.0914 S23: -0.0241 REMARK 3 S31: 0.0050 S32: -0.1151 S33: 0.0381 REMARK 3 REMARK 3 TLS GROUP : 4 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 327 A 413 REMARK 3 ORIGIN FOR THE GROUP (A): 26.1368 -33.9588 30.7624 REMARK 3 T TENSOR REMARK 3 T11: 0.1024 T22: 0.0857 REMARK 3 T33: 0.0650 T12: -0.0037 REMARK 3 T13: 0.0001 T23: -0.0143 REMARK 3 L TENSOR REMARK 3 L11: 0.0292 L22: 0.1739 REMARK 3 L33: 0.0556 L12: 0.0141 REMARK 3 L13: -0.0193 L23: -0.0764 REMARK 3 S TENSOR REMARK 3 S11: 0.0076 S12: -0.0097 S13: -0.0275 REMARK 3 S21: 0.0629 S22: -0.0044 S23: 0.0328 REMARK 3 S31: 0.0077 S32: 0.0050 S33: -0.0032 REMARK 3 REMARK 3 TLS GROUP : 5 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 414 A 466 REMARK 3 ORIGIN FOR THE GROUP (A): 23.5095 -47.4691 40.0201 REMARK 3 T TENSOR REMARK 3 T11: 0.0787 T22: 0.0798 REMARK 3 T33: 0.0606 T12: -0.0260 REMARK 3 T13: 0.0102 T23: 0.0087 REMARK 3 L TENSOR REMARK 3 L11: 0.3235 L22: 0.4288 REMARK 3 L33: 0.6854 L12: 0.2853 REMARK 3 L13: 0.2528 L23: 0.0502 REMARK 3 S TENSOR REMARK 3 S11: 0.0415 S12: -0.0288 S13: -0.0601 REMARK 3 S21: 0.0466 S22: -0.0374 S23: -0.0246 REMARK 3 S31: 0.0729 S32: 0.0147 S33: -0.0040 REMARK 3 REMARK 3 TLS GROUP : 6 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 467 A 501 REMARK 3 ORIGIN FOR THE GROUP (A): 24.5034 -40.1370 34.0907 REMARK 3 T TENSOR REMARK 3 T11: 0.0964 T22: 0.0925 REMARK 3 T33: 0.0723 T12: -0.0055 REMARK 3 T13: 0.0122 T23: 0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.0564 L22: 0.3349 REMARK 3 L33: 0.7142 L12: 0.1008 REMARK 3 L13: 0.0072 L23: 0.2538 REMARK 3 S TENSOR REMARK 3 S11: 0.0008 S12: -0.0357 S13: -0.0158 REMARK 3 S21: 0.0402 S22: -0.0333 S23: 0.0485 REMARK 3 S31: 0.0296 S32: 0.0399 S33: 0.0325 REMARK 3 REMARK 3 TLS GROUP : 7 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 502 A 516 REMARK 3 ORIGIN FOR THE GROUP (A): 21.1796 -31.3454 39.4422 REMARK 3 T TENSOR REMARK 3 T11: 0.0823 T22: 0.0878 REMARK 3 T33: 0.0861 T12: -0.0238 REMARK 3 T13: 0.0560 T23: 0.0133 REMARK 3 L TENSOR REMARK 3 L11: 1.0107 L22: 1.6306 REMARK 3 L33: 4.3407 L12: -1.0621 REMARK 3 L13: -1.1794 L23: 2.4289 REMARK 3 S TENSOR REMARK 3 S11: 0.0667 S12: -0.0832 S13: -0.0354 REMARK 3 S21: 0.0580 S22: 0.0480 S23: 0.0258 REMARK 3 S31: 0.1269 S32: -0.0403 S33: -0.1147 REMARK 3 REMARK 3 TLS GROUP : 8 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 517 A 576 REMARK 3 ORIGIN FOR THE GROUP (A): 27.3235 -35.8870 -2.5351 REMARK 3 T TENSOR REMARK 3 T11: 0.1120 T22: 0.0704 REMARK 3 T33: 0.0621 T12: 0.0211 REMARK 3 T13: -0.0179 T23: -0.0238 REMARK 3 L TENSOR REMARK 3 L11: 0.2269 L22: 0.3362 REMARK 3 L33: 0.5598 L12: -0.0346 REMARK 3 L13: 0.2465 L23: -0.2410 REMARK 3 S TENSOR REMARK 3 S11: -0.0256 S12: 0.0190 S13: -0.0225 REMARK 3 S21: -0.0614 S22: -0.0435 S23: 0.0015 REMARK 3 S31: -0.0218 S32: -0.0263 S33: 0.0691 REMARK 3 REMARK 3 TLS GROUP : 9 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 577 A 596 REMARK 3 ORIGIN FOR THE GROUP (A): 30.0443 -42.1487 -9.2987 REMARK 3 T TENSOR REMARK 3 T11: 0.1137 T22: 0.0772 REMARK 3 T33: 0.0542 T12: 0.0249 REMARK 3 T13: -0.0276 T23: -0.0070 REMARK 3 L TENSOR REMARK 3 L11: 0.4692 L22: 1.6047 REMARK 3 L33: 0.7095 L12: -0.8641 REMARK 3 L13: 0.0351 L23: 0.0240 REMARK 3 S TENSOR REMARK 3 S11: 0.0686 S12: -0.0002 S13: 0.0101 REMARK 3 S21: -0.1578 S22: -0.0272 S23: -0.0212 REMARK 3 S31: 0.0346 S32: 0.0170 S33: -0.0414 REMARK 3 REMARK 3 TLS GROUP : 10 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 597 A 611 REMARK 3 ORIGIN FOR THE GROUP (A): 19.5870 -37.7804 -16.5454 REMARK 3 T TENSOR REMARK 3 T11: 0.1334 T22: 0.1232 REMARK 3 T33: 0.0747 T12: 0.0397 REMARK 3 T13: -0.0630 T23: -0.0391 REMARK 3 L TENSOR REMARK 3 L11: 0.6939 L22: 1.9659 REMARK 3 L33: 0.7158 L12: -0.2074 REMARK 3 L13: 0.1057 L23: -0.8901 REMARK 3 S TENSOR REMARK 3 S11: 0.0939 S12: 0.1848 S13: -0.1817 REMARK 3 S21: -0.2134 S22: 0.0640 S23: 0.2304 REMARK 3 S31: 0.1056 S32: -0.0122 S33: -0.1579 REMARK 3 REMARK 3 TLS GROUP : 11 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 612 A 619 REMARK 3 ORIGIN FOR THE GROUP (A): 18.1777 -45.6873 -10.0411 REMARK 3 T TENSOR REMARK 3 T11: 0.1146 T22: 0.1274 REMARK 3 T33: 0.0977 T12: -0.0176 REMARK 3 T13: -0.0718 T23: -0.0040 REMARK 3 L TENSOR REMARK 3 L11: 7.2607 L22: 6.9914 REMARK 3 L33: 7.4388 L12: -6.5370 REMARK 3 L13: 4.9671 L23: -6.5607 REMARK 3 S TENSOR REMARK 3 S11: 0.0337 S12: 0.1659 S13: -0.5445 REMARK 3 S21: 0.0432 S22: 0.0435 S23: 0.3772 REMARK 3 S31: -0.0851 S32: -0.0439 S33: -0.0772 REMARK 3 REMARK 3 TLS GROUP : 12 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 620 A 643 REMARK 3 ORIGIN FOR THE GROUP (A): 14.0349 -38.7576 -0.5155 REMARK 3 T TENSOR REMARK 3 T11: 0.0903 T22: 0.0959 REMARK 3 T33: 0.0849 T12: 0.0455 REMARK 3 T13: -0.0685 T23: -0.0391 REMARK 3 L TENSOR REMARK 3 L11: 0.6347 L22: 1.1249 REMARK 3 L33: 2.2156 L12: 0.3289 REMARK 3 L13: 0.1465 L23: -1.3538 REMARK 3 S TENSOR REMARK 3 S11: 0.0079 S12: -0.0896 S13: -0.0045 REMARK 3 S21: -0.1673 S22: 0.0337 S23: 0.0530 REMARK 3 S31: 0.2121 S32: -0.1968 S33: -0.0416 REMARK 3 REMARK 3 TLS GROUP : 13 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 242 B 274 REMARK 3 ORIGIN FOR THE GROUP (A): 29.6564 -13.3276 29.3857 REMARK 3 T TENSOR REMARK 3 T11: 0.0932 T22: 0.0776 REMARK 3 T33: 0.0677 T12: 0.0040 REMARK 3 T13: -0.0068 T23: -0.0091 REMARK 3 L TENSOR REMARK 3 L11: 0.5295 L22: 0.7311 REMARK 3 L33: 0.1368 L12: -0.0158 REMARK 3 L13: -0.2216 L23: -0.1529 REMARK 3 S TENSOR REMARK 3 S11: 0.0278 S12: -0.0653 S13: 0.0017 REMARK 3 S21: 0.0446 S22: -0.0391 S23: 0.0619 REMARK 3 S31: -0.0360 S32: 0.0284 S33: 0.0112 REMARK 3 REMARK 3 TLS GROUP : 14 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 275 B 289 REMARK 3 ORIGIN FOR THE GROUP (A): 28.6516 -19.0814 6.8987 REMARK 3 T TENSOR REMARK 3 T11: 0.0740 T22: 0.0898 REMARK 3 T33: 0.0746 T12: 0.0072 REMARK 3 T13: -0.0321 T23: -0.0106 REMARK 3 L TENSOR REMARK 3 L11: 0.3161 L22: 0.3682 REMARK 3 L33: 5.1420 L12: -0.2348 REMARK 3 L13: 0.3832 L23: 0.6622 REMARK 3 S TENSOR REMARK 3 S11: -0.0918 S12: 0.0745 S13: -0.0447 REMARK 3 S21: 0.0745 S22: -0.0405 S23: 0.0831 REMARK 3 S31: -0.0152 S32: 0.1790 S33: 0.1324 REMARK 3 REMARK 3 TLS GROUP : 15 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 290 B 313 REMARK 3 ORIGIN FOR THE GROUP (A): 50.8752 -26.1009 15.7916 REMARK 3 T TENSOR REMARK 3 T11: 0.0854 T22: 0.0743 REMARK 3 T33: 0.0585 T12: 0.0116 REMARK 3 T13: -0.0117 T23: 0.0099 REMARK 3 L TENSOR REMARK 3 L11: 1.0948 L22: 0.1967 REMARK 3 L33: 0.6673 L12: -0.1902 REMARK 3 L13: 0.5054 L23: -0.2865 REMARK 3 S TENSOR REMARK 3 S11: 0.0220 S12: -0.0528 S13: -0.0026 REMARK 3 S21: -0.0052 S22: -0.0771 S23: -0.0327 REMARK 3 S31: 0.0410 S32: 0.0259 S33: 0.0551 REMARK 3 REMARK 3 TLS GROUP : 16 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 314 B 359 REMARK 3 ORIGIN FOR THE GROUP (A): 47.9394 -28.0961 11.7392 REMARK 3 T TENSOR REMARK 3 T11: 0.0868 T22: 0.0812 REMARK 3 T33: 0.0681 T12: 0.0143 REMARK 3 T13: -0.0041 T23: 0.0100 REMARK 3 L TENSOR REMARK 3 L11: 0.0480 L22: 0.3293 REMARK 3 L33: 0.1909 L12: 0.0506 REMARK 3 L13: -0.0954 L23: -0.1110 REMARK 3 S TENSOR REMARK 3 S11: 0.0047 S12: 0.0034 S13: -0.0090 REMARK 3 S21: -0.0201 S22: -0.0239 S23: -0.0630 REMARK 3 S31: -0.0141 S32: -0.0005 S33: 0.0193 REMARK 3 REMARK 3 TLS GROUP : 17 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 360 B 400 REMARK 3 ORIGIN FOR THE GROUP (A): 43.8977 -15.3802 12.4872 REMARK 3 T TENSOR REMARK 3 T11: 0.0882 T22: 0.0915 REMARK 3 T33: 0.0645 T12: 0.0103 REMARK 3 T13: -0.0155 T23: 0.0089 REMARK 3 L TENSOR REMARK 3 L11: 0.0130 L22: 0.2741 REMARK 3 L33: 0.1450 L12: -0.0507 REMARK 3 L13: 0.0115 L23: -0.0008 REMARK 3 S TENSOR REMARK 3 S11: -0.0097 S12: 0.0076 S13: 0.0203 REMARK 3 S21: 0.0013 S22: -0.0243 S23: -0.0349 REMARK 3 S31: 0.0012 S32: 0.0037 S33: 0.0340 REMARK 3 REMARK 3 TLS GROUP : 18 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 401 B 467 REMARK 3 ORIGIN FOR THE GROUP (A): 47.7670 -6.1879 5.4799 REMARK 3 T TENSOR REMARK 3 T11: 0.0892 T22: 0.0632 REMARK 3 T33: 0.0701 T12: -0.0067 REMARK 3 T13: -0.0142 T23: 0.0266 REMARK 3 L TENSOR REMARK 3 L11: 0.2528 L22: 0.3367 REMARK 3 L33: 0.3334 L12: -0.0925 REMARK 3 L13: 0.1801 L23: -0.1177 REMARK 3 S TENSOR REMARK 3 S11: -0.0234 S12: 0.0303 S13: -0.0112 REMARK 3 S21: -0.0160 S22: -0.0352 S23: -0.0112 REMARK 3 S31: -0.0410 S32: 0.0475 S33: 0.0587 REMARK 3 REMARK 3 TLS GROUP : 19 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 468 B 501 REMARK 3 ORIGIN FOR THE GROUP (A): 46.9987 -13.6886 7.8967 REMARK 3 T TENSOR REMARK 3 T11: 0.0830 T22: 0.0766 REMARK 3 T33: 0.0606 T12: -0.0004 REMARK 3 T13: -0.0099 T23: 0.0188 REMARK 3 L TENSOR REMARK 3 L11: 0.2642 L22: 0.4217 REMARK 3 L33: 0.5050 L12: -0.2739 REMARK 3 L13: -0.2582 L23: 0.1704 REMARK 3 S TENSOR REMARK 3 S11: 0.0362 S12: 0.0021 S13: 0.0425 REMARK 3 S21: -0.0538 S22: -0.0401 S23: -0.0609 REMARK 3 S31: -0.0607 S32: 0.0564 S33: 0.0040 REMARK 3 REMARK 3 TLS GROUP : 20 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 502 B 516 REMARK 3 ORIGIN FOR THE GROUP (A): 48.4909 -21.5609 0.6771 REMARK 3 T TENSOR REMARK 3 T11: 0.0690 T22: 0.0938 REMARK 3 T33: 0.0708 T12: 0.0088 REMARK 3 T13: 0.0134 T23: 0.0329 REMARK 3 L TENSOR REMARK 3 L11: 0.8147 L22: 0.8025 REMARK 3 L33: 1.6238 L12: -0.4607 REMARK 3 L13: -0.4721 L23: 1.0637 REMARK 3 S TENSOR REMARK 3 S11: -0.0805 S12: 0.0363 S13: 0.1303 REMARK 3 S21: 0.0162 S22: 0.0845 S23: -0.0829 REMARK 3 S31: 0.0073 S32: 0.1576 S33: -0.0039 REMARK 3 REMARK 3 TLS GROUP : 21 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 517 B 568 REMARK 3 ORIGIN FOR THE GROUP (A): 13.9887 -13.5971 21.0429 REMARK 3 T TENSOR REMARK 3 T11: 0.0743 T22: 0.0713 REMARK 3 T33: 0.1028 T12: 0.0121 REMARK 3 T13: 0.0037 T23: -0.0337 REMARK 3 L TENSOR REMARK 3 L11: 0.9012 L22: 0.2100 REMARK 3 L33: 0.1833 L12: 0.2152 REMARK 3 L13: -0.0879 L23: -0.1769 REMARK 3 S TENSOR REMARK 3 S11: 0.0046 S12: 0.0160 S13: -0.0079 REMARK 3 S21: 0.0192 S22: -0.0060 S23: 0.0442 REMARK 3 S31: -0.0183 S32: -0.0088 S33: 0.0014 REMARK 3 REMARK 3 TLS GROUP : 22 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 569 B 600 REMARK 3 ORIGIN FOR THE GROUP (A): 6.3602 -9.7356 28.7292 REMARK 3 T TENSOR REMARK 3 T11: 0.0763 T22: 0.0672 REMARK 3 T33: 0.0987 T12: 0.0192 REMARK 3 T13: 0.0169 T23: -0.0115 REMARK 3 L TENSOR REMARK 3 L11: 1.5994 L22: 0.8928 REMARK 3 L33: 0.8257 L12: 0.1876 REMARK 3 L13: -0.7733 L23: 0.5348 REMARK 3 S TENSOR REMARK 3 S11: 0.0218 S12: -0.0107 S13: -0.0025 REMARK 3 S21: 0.0955 S22: -0.0612 S23: 0.0661 REMARK 3 S31: 0.0384 S32: -0.0297 S33: 0.0393 REMARK 3 REMARK 3 TLS GROUP : 23 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 601 B 627 REMARK 3 ORIGIN FOR THE GROUP (A): 1.9806 -8.0581 16.7883 REMARK 3 T TENSOR REMARK 3 T11: 0.0636 T22: 0.1303 REMARK 3 T33: 0.1490 T12: -0.0183 REMARK 3 T13: -0.0572 T23: 0.0314 REMARK 3 L TENSOR REMARK 3 L11: 1.0957 L22: 0.5731 REMARK 3 L33: 1.2121 L12: -0.5989 REMARK 3 L13: -0.4027 L23: -0.0471 REMARK 3 S TENSOR REMARK 3 S11: -0.0285 S12: 0.1498 S13: 0.0298 REMARK 3 S21: -0.0259 S22: 0.0285 S23: 0.1088 REMARK 3 S31: -0.1353 S32: -0.1267 S33: 0.0000 REMARK 3 REMARK 3 TLS GROUP : 24 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 628 B 639 REMARK 3 ORIGIN FOR THE GROUP (A): 14.7696 -9.9699 8.8818 REMARK 3 T TENSOR REMARK 3 T11: 0.0710 T22: 0.1599 REMARK 3 T33: 0.0703 T12: 0.0296 REMARK 3 T13: -0.0184 T23: -0.0076 REMARK 3 L TENSOR REMARK 3 L11: 0.5433 L22: 4.6060 REMARK 3 L33: 0.9311 L12: -1.1290 REMARK 3 L13: 0.4319 L23: -2.0495 REMARK 3 S TENSOR REMARK 3 S11: 0.0574 S12: 0.2011 S13: 0.0342 REMARK 3 S21: 0.0874 S22: -0.0500 S23: 0.0452 REMARK 3 S31: -0.0474 S32: -0.0158 S33: -0.0075 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN USED IF PRESENT IN REMARK 3 THE INPUT U VALUES: RESIDUAL ONLY REMARK 4 REMARK 4 4HWR COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 19-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076016. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : NULL REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 5.9 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : N REMARK 200 RADIATION SOURCE : ROTATING ANODE REMARK 200 BEAMLINE : NULL REMARK 200 X-RAY GENERATOR MODEL : RIGAKU RU300 REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 1.54 REMARK 200 MONOCHROMATOR : NULL REMARK 200 OPTICS : MAR345 REMARK 200 REMARK 200 DETECTOR TYPE : IMAGE PLATE REMARK 200 DETECTOR MANUFACTURER : MAR SCANNER 300 MM PLATE REMARK 200 INTENSITY-INTEGRATION SOFTWARE : NULL REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 96015 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.900 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : NULL REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : NULL REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : NULL REMARK 200 COMPLETENESS FOR SHELL (%) : NULL REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER 2.3.0 REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 62.84 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 3.31 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PEG 4000, MPD, SODIUM CITRATE, PH 5.9, REMARK 280 VAPOR DIFFUSION, HANGING DROP, TEMPERATURE 298K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: C 1 2 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y,-Z REMARK 290 3555 X+1/2,Y+1/2,Z REMARK 290 4555 -X+1/2,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 3 1.000000 0.000000 0.000000 78.44950 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 54.88850 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 78.44950 REMARK 290 SMTRY2 4 0.000000 1.000000 0.000000 54.88850 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: DIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: DIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 4090 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33180 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -18.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 966 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 240 REMARK 465 GLU A 644 REMARK 465 HIS A 645 REMARK 465 HIS A 646 REMARK 465 HIS A 647 REMARK 465 HIS A 648 REMARK 465 HIS A 649 REMARK 465 HIS A 650 REMARK 465 MET B 240 REMARK 465 ALA B 241 REMARK 465 LEU B 640 REMARK 465 GLU B 641 REMARK 465 GLU B 642 REMARK 465 LEU B 643 REMARK 465 GLU B 644 REMARK 465 HIS B 645 REMARK 465 HIS B 646 REMARK 465 HIS B 647 REMARK 465 HIS B 648 REMARK 465 HIS B 649 REMARK 465 HIS B 650 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS IN SAME ASYMMETRIC UNIT REMARK 500 REMARK 500 THE FOLLOWING ATOMS ARE IN CLOSE CONTACT. REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI DISTANCE REMARK 500 OE1 GLU B 447 O HOH B 1019 2.08 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: CLOSE CONTACTS REMARK 500 REMARK 500 THE FOLLOWING ATOMS THAT ARE RELATED BY CRYSTALLOGRAPHIC REMARK 500 SYMMETRY ARE IN CLOSE CONTACT. AN ATOM LOCATED WITHIN 0.15 REMARK 500 ANGSTROMS OF A SYMMETRY RELATED ATOM IS ASSUMED TO BE ON A REMARK 500 SPECIAL POSITION AND IS, THEREFORE, LISTED IN REMARK 375 REMARK 500 INSTEAD OF REMARK 500. ATOMS WITH NON-BLANK ALTERNATE REMARK 500 LOCATION INDICATORS ARE NOT INCLUDED IN THE CALCULATIONS. REMARK 500 REMARK 500 DISTANCE CUTOFF: REMARK 500 2.2 ANGSTROMS FOR CONTACTS NOT INVOLVING HYDROGEN ATOMS REMARK 500 1.6 ANGSTROMS FOR CONTACTS INVOLVING HYDROGEN ATOMS REMARK 500 REMARK 500 ATM1 RES C SSEQI ATM2 RES C SSEQI SSYMOP DISTANCE REMARK 500 O HOH A 955 O HOH A 1001 2656 1.26 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND LENGTHS REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,2(A3,1X,A1,I4,A1,1X,A4,3X),1X,F6.3) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 RES CSSEQI ATM2 DEVIATION REMARK 500 HIS A 337 CG HIS A 337 CD2 0.060 REMARK 500 HIS A 511 CG HIS A 511 CD2 0.055 REMARK 500 SER A 550 CB SER A 550 OG 0.098 REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 407 CG - SD - CE ANGL. DEV. = 10.7 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 TYR A 313 -0.27 -141.10 REMARK 500 HIS A 371 108.03 -161.05 REMARK 500 ARG A 423 123.06 -39.07 REMARK 500 CYS A 480 -63.20 -125.67 REMARK 500 ASP A 549 -32.64 -38.82 REMARK 500 GLN A 639 -164.20 -73.19 REMARK 500 GLU A 641 -17.57 81.88 REMARK 500 ARG B 301 -35.22 -39.68 REMARK 500 TYR B 313 18.56 -151.92 REMARK 500 CYS B 480 -91.30 -123.36 REMARK 500 PRO B 534 150.77 -49.85 REMARK 500 ASN B 575 49.93 -72.66 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN A 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS A 334 SG REMARK 620 2 HIS A 385 NE2 98.6 REMARK 620 3 HIS A 511 ND1 101.1 93.5 REMARK 620 4 1B2 A 702 N7 90.5 152.6 110.1 REMARK 620 5 1B2 A 702 O6 149.6 84.4 108.9 75.2 REMARK 620 N 1 2 3 4 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 ZN B 701 ZN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 CYS B 334 SG REMARK 620 2 HIS B 385 NE2 96.2 REMARK 620 3 HIS B 511 ND1 102.0 98.4 REMARK 620 4 1B2 B 702 N7 91.0 156.9 101.6 REMARK 620 5 1B2 B 702 O6 145.5 85.0 112.0 76.8 REMARK 620 N 1 2 3 4 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN A 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1B2 A 702 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ZN B 701 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE 1B2 B 702 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HWO RELATED DB: PDB REMARK 900 RELATED ID: 4HWP RELATED DB: PDB REMARK 900 RELATED ID: 4HWS RELATED DB: PDB REMARK 900 RELATED ID: 4HWT RELATED DB: PDB DBREF 4HWR A 242 642 UNP P0A8M3 SYT_ECOLI 242 642 DBREF 4HWR B 242 642 UNP P0A8M3 SYT_ECOLI 242 642 SEQADV 4HWR MET A 240 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR ALA A 241 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR LEU A 643 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR GLU A 644 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS A 645 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS A 646 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS A 647 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS A 648 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS A 649 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS A 650 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR MET B 240 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR ALA B 241 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR LEU B 643 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR GLU B 644 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS B 645 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS B 646 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS B 647 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS B 648 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS B 649 UNP P0A8M3 EXPRESSION TAG SEQADV 4HWR HIS B 650 UNP P0A8M3 EXPRESSION TAG SEQRES 1 A 411 MET ALA ARG ASP HIS ARG LYS ILE GLY LYS GLN LEU ASP SEQRES 2 A 411 LEU TYR HIS MET GLN GLU GLU ALA PRO GLY MET VAL PHE SEQRES 3 A 411 TRP HIS ASN ASP GLY TRP THR ILE PHE ARG GLU LEU GLU SEQRES 4 A 411 VAL PHE VAL ARG SER LYS LEU LYS GLU TYR GLN TYR GLN SEQRES 5 A 411 GLU VAL LYS GLY PRO PHE MET MET ASP ARG VAL LEU TRP SEQRES 6 A 411 GLU LYS THR GLY HIS TRP ASP ASN TYR LYS ASP ALA MET SEQRES 7 A 411 PHE THR THR SER SER GLU ASN ARG GLU TYR CYS ILE LYS SEQRES 8 A 411 PRO MET ASN CYS PRO GLY HIS VAL GLN ILE PHE ASN GLN SEQRES 9 A 411 GLY LEU LYS SER TYR ARG ASP LEU PRO LEU ARG MET ALA SEQRES 10 A 411 GLU PHE GLY SER CYS HIS ARG ASN GLU PRO SER GLY SER SEQRES 11 A 411 LEU HIS GLY LEU MET ARG VAL ARG GLY PHE THR GLN ASP SEQRES 12 A 411 ASP ALA HIS ILE PHE CYS THR GLU GLU GLN ILE ARG ASP SEQRES 13 A 411 GLU VAL ASN GLY CYS ILE ARG LEU VAL TYR ASP MET TYR SEQRES 14 A 411 SER THR PHE GLY PHE GLU LYS ILE VAL VAL LYS LEU SER SEQRES 15 A 411 THR ARG PRO GLU LYS ARG ILE GLY SER ASP GLU MET TRP SEQRES 16 A 411 ASP ARG ALA GLU ALA ASP LEU ALA VAL ALA LEU GLU GLU SEQRES 17 A 411 ASN ASN ILE PRO PHE GLU TYR GLN LEU GLY GLU GLY ALA SEQRES 18 A 411 PHE TYR GLY PRO LYS ILE GLU PHE THR LEU TYR ASP CYS SEQRES 19 A 411 LEU ASP ARG ALA TRP GLN CYS GLY THR VAL GLN LEU ASP SEQRES 20 A 411 PHE SER LEU PRO SER ARG LEU SER ALA SER TYR VAL GLY SEQRES 21 A 411 GLU ASP ASN GLU ARG LYS VAL PRO VAL MET ILE HIS ARG SEQRES 22 A 411 ALA ILE LEU GLY SER MET GLU ARG PHE ILE GLY ILE LEU SEQRES 23 A 411 THR GLU GLU PHE ALA GLY PHE PHE PRO THR TRP LEU ALA SEQRES 24 A 411 PRO VAL GLN VAL VAL ILE MET ASN ILE THR ASP SER GLN SEQRES 25 A 411 SER GLU TYR VAL ASN GLU LEU THR GLN LYS LEU SER ASN SEQRES 26 A 411 ALA GLY ILE ARG VAL LYS ALA ASP LEU ARG ASN GLU LYS SEQRES 27 A 411 ILE GLY PHE LYS ILE ARG GLU HIS THR LEU ARG ARG VAL SEQRES 28 A 411 PRO TYR MET LEU VAL CYS GLY ASP LYS GLU VAL GLU SER SEQRES 29 A 411 GLY LYS VAL ALA VAL ARG THR ARG ARG GLY LYS ASP LEU SEQRES 30 A 411 GLY SER MET ASP VAL ASN GLU VAL ILE GLU LYS LEU GLN SEQRES 31 A 411 GLN GLU ILE ARG SER ARG SER LEU LYS GLN LEU GLU GLU SEQRES 32 A 411 LEU GLU HIS HIS HIS HIS HIS HIS SEQRES 1 B 411 MET ALA ARG ASP HIS ARG LYS ILE GLY LYS GLN LEU ASP SEQRES 2 B 411 LEU TYR HIS MET GLN GLU GLU ALA PRO GLY MET VAL PHE SEQRES 3 B 411 TRP HIS ASN ASP GLY TRP THR ILE PHE ARG GLU LEU GLU SEQRES 4 B 411 VAL PHE VAL ARG SER LYS LEU LYS GLU TYR GLN TYR GLN SEQRES 5 B 411 GLU VAL LYS GLY PRO PHE MET MET ASP ARG VAL LEU TRP SEQRES 6 B 411 GLU LYS THR GLY HIS TRP ASP ASN TYR LYS ASP ALA MET SEQRES 7 B 411 PHE THR THR SER SER GLU ASN ARG GLU TYR CYS ILE LYS SEQRES 8 B 411 PRO MET ASN CYS PRO GLY HIS VAL GLN ILE PHE ASN GLN SEQRES 9 B 411 GLY LEU LYS SER TYR ARG ASP LEU PRO LEU ARG MET ALA SEQRES 10 B 411 GLU PHE GLY SER CYS HIS ARG ASN GLU PRO SER GLY SER SEQRES 11 B 411 LEU HIS GLY LEU MET ARG VAL ARG GLY PHE THR GLN ASP SEQRES 12 B 411 ASP ALA HIS ILE PHE CYS THR GLU GLU GLN ILE ARG ASP SEQRES 13 B 411 GLU VAL ASN GLY CYS ILE ARG LEU VAL TYR ASP MET TYR SEQRES 14 B 411 SER THR PHE GLY PHE GLU LYS ILE VAL VAL LYS LEU SER SEQRES 15 B 411 THR ARG PRO GLU LYS ARG ILE GLY SER ASP GLU MET TRP SEQRES 16 B 411 ASP ARG ALA GLU ALA ASP LEU ALA VAL ALA LEU GLU GLU SEQRES 17 B 411 ASN ASN ILE PRO PHE GLU TYR GLN LEU GLY GLU GLY ALA SEQRES 18 B 411 PHE TYR GLY PRO LYS ILE GLU PHE THR LEU TYR ASP CYS SEQRES 19 B 411 LEU ASP ARG ALA TRP GLN CYS GLY THR VAL GLN LEU ASP SEQRES 20 B 411 PHE SER LEU PRO SER ARG LEU SER ALA SER TYR VAL GLY SEQRES 21 B 411 GLU ASP ASN GLU ARG LYS VAL PRO VAL MET ILE HIS ARG SEQRES 22 B 411 ALA ILE LEU GLY SER MET GLU ARG PHE ILE GLY ILE LEU SEQRES 23 B 411 THR GLU GLU PHE ALA GLY PHE PHE PRO THR TRP LEU ALA SEQRES 24 B 411 PRO VAL GLN VAL VAL ILE MET ASN ILE THR ASP SER GLN SEQRES 25 B 411 SER GLU TYR VAL ASN GLU LEU THR GLN LYS LEU SER ASN SEQRES 26 B 411 ALA GLY ILE ARG VAL LYS ALA ASP LEU ARG ASN GLU LYS SEQRES 27 B 411 ILE GLY PHE LYS ILE ARG GLU HIS THR LEU ARG ARG VAL SEQRES 28 B 411 PRO TYR MET LEU VAL CYS GLY ASP LYS GLU VAL GLU SER SEQRES 29 B 411 GLY LYS VAL ALA VAL ARG THR ARG ARG GLY LYS ASP LEU SEQRES 30 B 411 GLY SER MET ASP VAL ASN GLU VAL ILE GLU LYS LEU GLN SEQRES 31 B 411 GLN GLU ILE ARG SER ARG SER LEU LYS GLN LEU GLU GLU SEQRES 32 B 411 LEU GLU HIS HIS HIS HIS HIS HIS HET ZN A 701 1 HET 1B2 A 702 26 HET ZN B 701 1 HET 1B2 B 702 26 HETNAM ZN ZINC ION HETNAM 1B2 N-{[3-(2H-INDAZOL-5-YL)PHENYL]SULFONYL}-L-THREONINAMIDE FORMUL 3 ZN 2(ZN 2+) FORMUL 4 1B2 2(C17 H18 N4 O4 S) FORMUL 7 HOH *444(H2 O) HELIX 1 1 ASP A 243 LEU A 251 1 9 HELIX 2 2 HIS A 267 TYR A 288 1 22 HELIX 3 3 ARG A 301 THR A 307 1 7 HELIX 4 4 GLY A 308 LYS A 314 1 7 HELIX 5 5 ASP A 315 MET A 317 5 3 HELIX 6 6 ASN A 333 ASN A 342 1 10 HELIX 7 7 SER A 347 LEU A 351 5 5 HELIX 8 8 PRO A 366 LEU A 370 5 5 HELIX 9 9 THR A 389 GLU A 391 5 3 HELIX 10 10 GLN A 392 PHE A 411 1 20 HELIX 11 11 SER A 430 ASN A 448 1 19 HELIX 12 12 SER A 488 LEU A 493 1 6 HELIX 13 13 MET A 518 PHE A 529 1 12 HELIX 14 14 THR A 548 SER A 550 5 3 HELIX 15 15 GLN A 551 ALA A 565 1 15 HELIX 16 16 LYS A 577 ARG A 588 1 12 HELIX 17 17 GLY A 597 GLY A 604 1 8 HELIX 18 18 VAL A 621 SER A 634 1 14 HELIX 19 19 ASP B 243 LEU B 251 1 9 HELIX 20 20 HIS B 267 GLU B 287 1 21 HELIX 21 21 ARG B 301 THR B 307 1 7 HELIX 22 22 GLY B 308 TYR B 313 1 6 HELIX 23 23 LYS B 314 MET B 317 5 4 HELIX 24 24 ASN B 333 ASN B 342 1 10 HELIX 25 25 SER B 347 LEU B 351 5 5 HELIX 26 26 PRO B 366 LEU B 370 5 5 HELIX 27 27 THR B 389 GLU B 391 5 3 HELIX 28 28 GLN B 392 GLY B 412 1 21 HELIX 29 29 SER B 430 ASN B 448 1 19 HELIX 30 30 SER B 488 LEU B 493 1 6 HELIX 31 31 MET B 518 PHE B 529 1 12 HELIX 32 32 THR B 548 SER B 550 5 3 HELIX 33 33 GLN B 551 ALA B 565 1 15 HELIX 34 34 LYS B 577 ARG B 588 1 12 HELIX 35 35 GLY B 597 GLY B 604 1 8 HELIX 36 36 VAL B 621 SER B 634 1 14 SHEET 1 A 2 TYR A 254 HIS A 255 0 SHEET 2 A 2 PHE A 265 TRP A 266 -1 O PHE A 265 N HIS A 255 SHEET 1 B 8 GLN A 291 GLU A 292 0 SHEET 2 B 8 LEU A 353 HIS A 362 1 O ARG A 354 N GLN A 291 SHEET 3 B 8 GLY A 378 CYS A 388 -1 O PHE A 379 N CYS A 361 SHEET 4 B 8 VAL A 508 SER A 517 -1 O ILE A 510 N ILE A 386 SHEET 5 B 8 ALA A 477 ASP A 486 -1 N GLN A 484 O HIS A 511 SHEET 6 B 8 LYS A 465 TYR A 471 -1 N ILE A 466 O VAL A 483 SHEET 7 B 8 ILE A 416 SER A 421 -1 N SER A 421 O LYS A 465 SHEET 8 B 8 PHE A 452 GLN A 455 1 O GLN A 455 N LEU A 420 SHEET 1 C 3 MET A 298 ASP A 300 0 SHEET 2 C 3 ARG A 325 ILE A 329 -1 O CYS A 328 N MET A 299 SHEET 3 C 3 THR A 319 SER A 322 -1 N THR A 320 O TYR A 327 SHEET 1 D 2 TYR A 497 VAL A 498 0 SHEET 2 D 2 ARG A 504 LYS A 505 -1 O LYS A 505 N TYR A 497 SHEET 1 E 5 VAL A 569 ASP A 572 0 SHEET 2 E 5 VAL A 542 ASN A 546 1 N ILE A 544 O ASP A 572 SHEET 3 E 5 TYR A 592 CYS A 596 1 O LEU A 594 N VAL A 543 SHEET 4 E 5 LYS A 605 THR A 610 -1 O ALA A 607 N VAL A 595 SHEET 5 E 5 ASP A 615 ASP A 620 -1 O GLY A 617 N VAL A 608 SHEET 1 F 2 TYR B 254 HIS B 255 0 SHEET 2 F 2 PHE B 265 TRP B 266 -1 O PHE B 265 N HIS B 255 SHEET 1 G 8 GLN B 291 GLU B 292 0 SHEET 2 G 8 LEU B 353 HIS B 362 1 O ARG B 354 N GLN B 291 SHEET 3 G 8 GLY B 378 CYS B 388 -1 O HIS B 385 N MET B 355 SHEET 4 G 8 VAL B 508 SER B 517 -1 O VAL B 508 N CYS B 388 SHEET 5 G 8 ALA B 477 ASP B 486 -1 N GLN B 484 O HIS B 511 SHEET 6 G 8 LYS B 465 TYR B 471 -1 N ILE B 466 O VAL B 483 SHEET 7 G 8 VAL B 417 SER B 421 -1 N SER B 421 O LYS B 465 SHEET 8 G 8 GLU B 453 GLN B 455 1 O GLN B 455 N LEU B 420 SHEET 1 H 3 MET B 298 ASP B 300 0 SHEET 2 H 3 ARG B 325 ILE B 329 -1 O CYS B 328 N MET B 299 SHEET 3 H 3 THR B 319 SER B 322 -1 N THR B 320 O TYR B 327 SHEET 1 I 2 TYR B 497 VAL B 498 0 SHEET 2 I 2 ARG B 504 LYS B 505 -1 O LYS B 505 N TYR B 497 SHEET 1 J 5 VAL B 569 ASP B 572 0 SHEET 2 J 5 VAL B 542 ASN B 546 1 N ILE B 544 O ASP B 572 SHEET 3 J 5 TYR B 592 CYS B 596 1 O LEU B 594 N VAL B 543 SHEET 4 J 5 LYS B 605 THR B 610 -1 O ARG B 609 N MET B 593 SHEET 5 J 5 ASP B 615 ASP B 620 -1 O LEU B 616 N VAL B 608 LINK SG CYS A 334 ZN ZN A 701 1555 1555 2.41 LINK NE2 HIS A 385 ZN ZN A 701 1555 1555 1.95 LINK ND1 HIS A 511 ZN ZN A 701 1555 1555 2.16 LINK ZN ZN A 701 N7 1B2 A 702 1555 1555 2.06 LINK ZN ZN A 701 O6 1B2 A 702 1555 1555 2.31 LINK SG CYS B 334 ZN ZN B 701 1555 1555 2.40 LINK NE2 HIS B 385 ZN ZN B 701 1555 1555 2.16 LINK ND1 HIS B 511 ZN ZN B 701 1555 1555 2.24 LINK ZN ZN B 701 N7 1B2 B 702 1555 1555 2.11 LINK ZN ZN B 701 O6 1B2 B 702 1555 1555 2.29 CISPEP 1 LEU A 351 PRO A 352 0 1.68 CISPEP 2 LEU B 351 PRO B 352 0 -4.01 SITE 1 AC1 4 CYS A 334 HIS A 385 HIS A 511 1B2 A 702 SITE 1 AC2 17 MET A 332 CYS A 334 ARG A 363 MET A 374 SITE 2 AC2 17 ARG A 375 VAL A 376 PHE A 379 GLN A 381 SITE 3 AC2 17 ASP A 383 HIS A 385 TYR A 462 LYS A 465 SITE 4 AC2 17 THR A 482 GLN A 484 HIS A 511 ZN A 701 SITE 5 AC2 17 HOH A 847 SITE 1 AC3 4 CYS B 334 HIS B 385 HIS B 511 1B2 B 702 SITE 1 AC4 18 MET B 332 CYS B 334 ARG B 363 GLU B 365 SITE 2 AC4 18 MET B 374 ARG B 375 VAL B 376 PHE B 379 SITE 3 AC4 18 GLN B 381 ASP B 383 HIS B 385 TYR B 462 SITE 4 AC4 18 LYS B 465 GLN B 479 GLN B 484 HIS B 511 SITE 5 AC4 18 ARG B 520 ZN B 701 CRYST1 156.899 109.777 86.995 90.00 123.76 90.00 C 1 2 1 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.006374 0.000000 0.004261 0.00000 SCALE2 0.000000 0.009109 0.000000 0.00000 SCALE3 0.000000 0.000000 0.013827 0.00000