HEADER HYDROLASE/HYDROLASE INHIBITOR 12-NOV-12 4HXQ TITLE CRYSTAL STRUCTURE OF HUMAN ARGINASE-1 COMPLEXED WITH INHIBITOR 14 COMPND MOL_ID: 1; COMPND 2 MOLECULE: ARGINASE-1; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: LIVER-TYPE ARGINASE, TYPE I ARGINASE; COMPND 5 EC: 3.5.3.1; COMPND 6 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HOMO SAPIENS; SOURCE 3 ORGANISM_COMMON: HUMAN; SOURCE 4 ORGANISM_TAXID: 9606; SOURCE 5 GENE: ARG1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 469008; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: BL21(DE3); SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: PET24A KEYWDS METALLOENZYME, ALPHA/BETA FOLD, HYDROLASE, ARGININE METABOLISM, KEYWDS 2 MANGANESE, HYDROLASE-HYDROLASE INHIBITOR COMPLEX EXPDTA X-RAY DIFFRACTION AUTHOR A.COUSIDO-SIAH,A.MITSCHLER,F.X.RUIZ,D.L.WHITEHOUSE,A.GOLEBIOWSKI, AUTHOR 2 M.JI,M.ZHANG,P.BECKETT,R.SHEELER,M.ANDREOLI,B.CONWAY,K.MAHBOUBI, AUTHOR 3 H.SCHROETER,M.C.VAN ZANDT,A.PODJARNY REVDAT 6 20-SEP-23 4HXQ 1 REMARK LINK REVDAT 5 17-JUL-19 4HXQ 1 REMARK REVDAT 4 24-JAN-18 4HXQ 1 AUTHOR REVDAT 3 15-NOV-17 4HXQ 1 REMARK REVDAT 2 10-APR-13 4HXQ 1 JRNL REVDAT 1 20-MAR-13 4HXQ 0 JRNL AUTH M.C.VAN ZANDT,D.L.WHITEHOUSE,A.GOLEBIOWSKI,M.K.JI,M.ZHANG, JRNL AUTH 2 R.P.BECKETT,G.E.JAGDMANN,T.R.RYDER,R.SHEELER,M.ANDREOLI, JRNL AUTH 3 B.CONWAY,K.MAHBOUBI,G.D'ANGELO,A.MITSCHLER,A.COUSIDO-SIAH, JRNL AUTH 4 F.X.RUIZ,E.I.HOWARD,A.D.PODJARNY,H.SCHROETER JRNL TITL DISCOVERY OF JRNL TITL 2 (R)-2-AMINO-6-BORONO-2-(2-(PIPERIDIN-1-YL)ETHYL)HEXANOIC JRNL TITL 3 ACID AND CONGENERS AS HIGHLY POTENT INHIBITORS OF HUMAN JRNL TITL 4 ARGINASES I AND II FOR TREATMENT OF MYOCARDIAL REPERFUSION JRNL TITL 5 INJURY. JRNL REF J.MED.CHEM. V. 56 2568 2013 JRNL REFN ISSN 0022-2623 JRNL PMID 23472952 JRNL DOI 10.1021/JM400014C REMARK 2 REMARK 2 RESOLUTION. 1.45 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : PHENIX 1.8_1069 REMARK 3 AUTHORS : PAUL ADAMS,PAVEL AFONINE,VINCENT CHEN,IAN REMARK 3 : DAVIS,KRESHNA GOPAL,RALF GROSSE-KUNSTLEVE, REMARK 3 : LI-WEI HUNG,ROBERT IMMORMINO,TOM IOERGER, REMARK 3 : AIRLIE MCCOY,ERIK MCKEE,NIGEL MORIARTY, REMARK 3 : REETAL PAI,RANDY READ,JANE RICHARDSON, REMARK 3 : DAVID RICHARDSON,TOD ROMO,JIM SACCHETTINI, REMARK 3 : NICHOLAS SAUTER,JACOB SMITH,LAURENT REMARK 3 : STORONI,TOM TERWILLIGER,PETER ZWART REMARK 3 REMARK 3 REFINEMENT TARGET : TWIN_LSQ_F REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.45 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 39.11 REMARK 3 MIN(FOBS/SIGMA_FOBS) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.4 REMARK 3 NUMBER OF REFLECTIONS : 111988 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 R VALUE (WORKING + TEST SET) : 0.194 REMARK 3 R VALUE (WORKING SET) : 0.188 REMARK 3 FREE R VALUE : 0.202 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.010 REMARK 3 FREE R VALUE TEST SET COUNT : 5614 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT (IN BINS). REMARK 3 BIN RESOLUTION RANGE COMPL. NWORK NFREE RWORK RFREE REMARK 3 1 1.4746 - 1.4496 0.93 0 286 0.3135 0.3692 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : FLAT BULK SOLVENT MODEL REMARK 3 SOLVENT RADIUS : 1.11 REMARK 3 SHRINKAGE RADIUS : 0.90 REMARK 3 K_SOL : NULL REMARK 3 B_SOL : NULL REMARK 3 REMARK 3 ERROR ESTIMATES. REMARK 3 COORDINATE ERROR (MAXIMUM-LIKELIHOOD BASED) : NULL REMARK 3 PHASE ERROR (DEGREES, MAXIMUM-LIKELIHOOD BASED) : 18.330 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 9.66 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : NULL REMARK 3 B22 (A**2) : NULL REMARK 3 B33 (A**2) : NULL REMARK 3 B12 (A**2) : NULL REMARK 3 B13 (A**2) : NULL REMARK 3 B23 (A**2) : NULL REMARK 3 REMARK 3 TWINNING INFORMATION. REMARK 3 FRACTION: 0.5000 REMARK 3 OPERATOR: -H,-K,L REMARK 3 REMARK 3 DEVIATIONS FROM IDEAL VALUES. REMARK 3 RMSD COUNT REMARK 3 BOND : 0.009 NULL REMARK 3 ANGLE : 1.347 NULL REMARK 3 CHIRALITY : 0.120 NULL REMARK 3 PLANARITY : 0.007 NULL REMARK 3 DIHEDRAL : 15.645 NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 NCS DETAILS REMARK 3 NUMBER OF NCS GROUPS : NULL REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: NULL REMARK 4 REMARK 4 4HXQ COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 16-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076051. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 5 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SLS REMARK 200 BEAMLINE : X06SA REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.70849 REMARK 200 MONOCHROMATOR : BARTELS MONOCHROMATOR REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : PSI PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : HKL-2000, DENZO REMARK 200 DATA SCALING SOFTWARE : SCALEPACK, HKL-2000 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 111989 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.450 REMARK 200 RESOLUTION RANGE LOW (A) : 50.000 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 99.5 REMARK 200 DATA REDUNDANCY : 4.900 REMARK 200 R MERGE (I) : 0.05300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 9.3000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.45 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.50 REMARK 200 COMPLETENESS FOR SHELL (%) : 98.5 REMARK 200 DATA REDUNDANCY IN SHELL : 4.10 REMARK 200 R MERGE FOR SHELL (I) : 0.46900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: AMORE REMARK 200 STARTING MODEL: PDB ENTRY 1D3V REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 49.04 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.41 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 100 MM MALONIC ACID, IMIDAZOL, BORIC REMARK 280 SYSTEM, 25% POLYETHYLENE GLYCOL (PEG) 1500, VAPOR DIFFUSION, REMARK 280 HANGING DROP, TEMPERATURE 277K, PH 5 REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 3 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: BIOLOGICAL ASSEMBLY IS A TRIMER GENERATED FROM MONOMER A IN REMARK 300 THE ASYMMETRIC UNIT BY THE OPERATIONS: -X+Y, -X, Z-L; -Y, X-Y, Z+1; REMARK 300 OR FROM MONOMER B IN THE ASYMMETRIC UNIT BY THE OPERATIONS: -X+Y, - REMARK 300 X, Z; -Y, X-Y, Z REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5590 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33190 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 -45.16050 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 78.22028 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 -90.32100 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TRIMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TRIMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 5480 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 33270 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -19.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 3 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH B 627 LIES ON A SPECIAL POSITION. REMARK 375 HOH B 654 LIES ON A SPECIAL POSITION. REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 GLU A 44 -0.01 -58.31 REMARK 500 ASP A 61 74.01 -155.42 REMARK 500 GLN A 65 -112.67 60.01 REMARK 500 ARG A 180 10.10 -151.10 REMARK 500 ARG B 6 92.25 -165.53 REMARK 500 GLN B 43 -164.06 -102.16 REMARK 500 GLN B 65 -113.73 56.03 REMARK 500 ASP B 124 149.92 -174.75 REMARK 500 ARG B 180 18.49 -154.47 REMARK 500 ASP B 181 78.51 -154.25 REMARK 500 REMARK 500 REMARK: NULL REMARK 620 REMARK 620 METAL COORDINATION REMARK 620 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 620 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE): REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 903 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS A 101 ND1 REMARK 620 2 ASP A 124 OD2 96.2 REMARK 620 3 ASP A 128 OD1 88.2 88.8 REMARK 620 4 ASP A 232 OD2 98.0 87.9 173.3 REMARK 620 5 X8A A 901 O21 107.4 156.4 90.6 90.1 REMARK 620 6 X8A A 901 O22 164.0 99.2 87.8 87.0 57.2 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN A 902 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP A 124 OD1 REMARK 620 2 HIS A 126 ND1 96.4 REMARK 620 3 ASP A 232 OD2 84.9 171.4 REMARK 620 4 ASP A 234 OD2 128.0 97.8 87.9 REMARK 620 5 ASP A 234 OD1 72.5 103.2 85.3 55.6 REMARK 620 6 X8A A 901 O22 99.6 86.0 85.5 131.0 168.4 REMARK 620 7 X8A A 901 O20 151.1 95.4 79.8 76.0 129.7 55.1 REMARK 620 N 1 2 3 4 5 6 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 403 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 HIS B 101 ND1 REMARK 620 2 ASP B 124 OD2 93.9 REMARK 620 3 ASP B 128 OD1 89.9 86.8 REMARK 620 4 ASP B 232 OD2 98.2 89.2 171.2 REMARK 620 5 X8A B 401 O21 109.7 156.2 90.4 90.1 REMARK 620 6 X8A B 401 O22 167.1 98.4 87.1 85.7 57.8 REMARK 620 N 1 2 3 4 5 REMARK 620 REMARK 620 COORDINATION ANGLES FOR: M RES CSSEQI METAL REMARK 620 MN B 402 MN REMARK 620 N RES CSSEQI ATOM REMARK 620 1 ASP B 124 OD1 REMARK 620 2 HIS B 126 ND1 91.2 REMARK 620 3 ASP B 232 OD2 85.4 175.1 REMARK 620 4 ASP B 234 OD2 121.7 90.9 93.9 REMARK 620 5 ASP B 234 OD1 67.8 100.8 81.2 54.7 REMARK 620 6 X8A B 401 O22 97.5 86.1 90.9 140.7 163.7 REMARK 620 7 X8A B 401 O20 153.4 98.1 83.6 83.2 133.6 58.6 REMARK 620 N 1 2 3 4 5 6 REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE X8A A 901 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 902 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN A 903 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE X8A B 401 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 402 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE MN B 403 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 1D3V RELATED DB: PDB REMARK 900 RELATED ID: 2AEB RELATED DB: PDB REMARK 900 RELATED ID: 4HWW RELATED DB: PDB REMARK 900 RELATED ID: 4HZE RELATED DB: PDB DBREF 4HXQ A 5 318 UNP P05089 ARGI1_HUMAN 5 318 DBREF 4HXQ B 5 318 UNP P05089 ARGI1_HUMAN 5 318 SEQRES 1 A 314 SER ARG THR ILE GLY ILE ILE GLY ALA PRO PHE SER LYS SEQRES 2 A 314 GLY GLN PRO ARG GLY GLY VAL GLU GLU GLY PRO THR VAL SEQRES 3 A 314 LEU ARG LYS ALA GLY LEU LEU GLU LYS LEU LYS GLU GLN SEQRES 4 A 314 GLU CYS ASP VAL LYS ASP TYR GLY ASP LEU PRO PHE ALA SEQRES 5 A 314 ASP ILE PRO ASN ASP SER PRO PHE GLN ILE VAL LYS ASN SEQRES 6 A 314 PRO ARG SER VAL GLY LYS ALA SER GLU GLN LEU ALA GLY SEQRES 7 A 314 LYS VAL ALA GLU VAL LYS LYS ASN GLY ARG ILE SER LEU SEQRES 8 A 314 VAL LEU GLY GLY ASP HIS SER LEU ALA ILE GLY SER ILE SEQRES 9 A 314 SER GLY HIS ALA ARG VAL HIS PRO ASP LEU GLY VAL ILE SEQRES 10 A 314 TRP VAL ASP ALA HIS THR ASP ILE ASN THR PRO LEU THR SEQRES 11 A 314 THR THR SER GLY ASN LEU HIS GLY GLN PRO VAL SER PHE SEQRES 12 A 314 LEU LEU LYS GLU LEU LYS GLY LYS ILE PRO ASP VAL PRO SEQRES 13 A 314 GLY PHE SER TRP VAL THR PRO CYS ILE SER ALA LYS ASP SEQRES 14 A 314 ILE VAL TYR ILE GLY LEU ARG ASP VAL ASP PRO GLY GLU SEQRES 15 A 314 HIS TYR ILE LEU LYS THR LEU GLY ILE LYS TYR PHE SER SEQRES 16 A 314 MET THR GLU VAL ASP ARG LEU GLY ILE GLY LYS VAL MET SEQRES 17 A 314 GLU GLU THR LEU SER TYR LEU LEU GLY ARG LYS LYS ARG SEQRES 18 A 314 PRO ILE HIS LEU SER PHE ASP VAL ASP GLY LEU ASP PRO SEQRES 19 A 314 SER PHE THR PRO ALA THR GLY THR PRO VAL VAL GLY GLY SEQRES 20 A 314 LEU THR TYR ARG GLU GLY LEU TYR ILE THR GLU GLU ILE SEQRES 21 A 314 TYR LYS THR GLY LEU LEU SER GLY LEU ASP ILE MET GLU SEQRES 22 A 314 VAL ASN PRO SER LEU GLY LYS THR PRO GLU GLU VAL THR SEQRES 23 A 314 ARG THR VAL ASN THR ALA VAL ALA ILE THR LEU ALA CYS SEQRES 24 A 314 PHE GLY LEU ALA ARG GLU GLY ASN HIS LYS PRO ILE ASP SEQRES 25 A 314 TYR LEU SEQRES 1 B 314 SER ARG THR ILE GLY ILE ILE GLY ALA PRO PHE SER LYS SEQRES 2 B 314 GLY GLN PRO ARG GLY GLY VAL GLU GLU GLY PRO THR VAL SEQRES 3 B 314 LEU ARG LYS ALA GLY LEU LEU GLU LYS LEU LYS GLU GLN SEQRES 4 B 314 GLU CYS ASP VAL LYS ASP TYR GLY ASP LEU PRO PHE ALA SEQRES 5 B 314 ASP ILE PRO ASN ASP SER PRO PHE GLN ILE VAL LYS ASN SEQRES 6 B 314 PRO ARG SER VAL GLY LYS ALA SER GLU GLN LEU ALA GLY SEQRES 7 B 314 LYS VAL ALA GLU VAL LYS LYS ASN GLY ARG ILE SER LEU SEQRES 8 B 314 VAL LEU GLY GLY ASP HIS SER LEU ALA ILE GLY SER ILE SEQRES 9 B 314 SER GLY HIS ALA ARG VAL HIS PRO ASP LEU GLY VAL ILE SEQRES 10 B 314 TRP VAL ASP ALA HIS THR ASP ILE ASN THR PRO LEU THR SEQRES 11 B 314 THR THR SER GLY ASN LEU HIS GLY GLN PRO VAL SER PHE SEQRES 12 B 314 LEU LEU LYS GLU LEU LYS GLY LYS ILE PRO ASP VAL PRO SEQRES 13 B 314 GLY PHE SER TRP VAL THR PRO CYS ILE SER ALA LYS ASP SEQRES 14 B 314 ILE VAL TYR ILE GLY LEU ARG ASP VAL ASP PRO GLY GLU SEQRES 15 B 314 HIS TYR ILE LEU LYS THR LEU GLY ILE LYS TYR PHE SER SEQRES 16 B 314 MET THR GLU VAL ASP ARG LEU GLY ILE GLY LYS VAL MET SEQRES 17 B 314 GLU GLU THR LEU SER TYR LEU LEU GLY ARG LYS LYS ARG SEQRES 18 B 314 PRO ILE HIS LEU SER PHE ASP VAL ASP GLY LEU ASP PRO SEQRES 19 B 314 SER PHE THR PRO ALA THR GLY THR PRO VAL VAL GLY GLY SEQRES 20 B 314 LEU THR TYR ARG GLU GLY LEU TYR ILE THR GLU GLU ILE SEQRES 21 B 314 TYR LYS THR GLY LEU LEU SER GLY LEU ASP ILE MET GLU SEQRES 22 B 314 VAL ASN PRO SER LEU GLY LYS THR PRO GLU GLU VAL THR SEQRES 23 B 314 ARG THR VAL ASN THR ALA VAL ALA ILE THR LEU ALA CYS SEQRES 24 B 314 PHE GLY LEU ALA ARG GLU GLY ASN HIS LYS PRO ILE ASP SEQRES 25 B 314 TYR LEU HET X8A A 901 22 HET MN A 902 1 HET MN A 903 1 HET X8A B 401 22 HET MN B 402 1 HET MN B 403 1 HETNAM X8A [(5R)-5-CARBOXY-5-(METHYLAMINO)-7-(PIPERIDIN-1-YL) HETNAM 2 X8A HEPTYL](TRIHYDROXY)BORATE(1-) HETNAM MN MANGANESE (II) ION FORMUL 3 X8A 2(C14 H30 B N2 O5 1-) FORMUL 4 MN 4(MN 2+) FORMUL 9 HOH *450(H2 O) HELIX 1 1 ARG A 21 GLU A 25 5 5 HELIX 2 2 GLU A 26 ALA A 34 1 9 HELIX 3 3 GLY A 35 GLN A 43 1 9 HELIX 4 4 ASN A 69 ASN A 90 1 22 HELIX 5 5 ASP A 100 SER A 102 5 3 HELIX 6 6 LEU A 103 HIS A 115 1 13 HELIX 7 7 ASN A 139 GLY A 142 5 4 HELIX 8 8 GLN A 143 LEU A 149 1 7 HELIX 9 9 LYS A 150 LYS A 153 5 4 HELIX 10 10 SER A 170 LYS A 172 5 3 HELIX 11 11 ASP A 183 GLY A 194 1 12 HELIX 12 12 MET A 200 GLY A 207 1 8 HELIX 13 13 GLY A 207 GLY A 221 1 15 HELIX 14 14 ASP A 234 LEU A 236 5 3 HELIX 15 15 THR A 253 THR A 267 1 15 HELIX 16 16 ASN A 279 GLY A 283 5 5 HELIX 17 17 THR A 285 PHE A 304 1 20 HELIX 18 18 ARG B 21 GLU B 25 5 5 HELIX 19 19 GLU B 26 ALA B 34 1 9 HELIX 20 20 GLY B 35 GLN B 43 1 9 HELIX 21 21 ASN B 69 ASN B 90 1 22 HELIX 22 22 ASP B 100 SER B 102 5 3 HELIX 23 23 LEU B 103 HIS B 115 1 13 HELIX 24 24 ASN B 139 GLY B 142 5 4 HELIX 25 25 GLN B 143 LEU B 149 1 7 HELIX 26 26 LYS B 150 LYS B 153 5 4 HELIX 27 27 SER B 170 LYS B 172 5 3 HELIX 28 28 ASP B 183 GLY B 194 1 12 HELIX 29 29 MET B 200 GLY B 207 1 8 HELIX 30 30 GLY B 207 GLY B 221 1 15 HELIX 31 31 ASP B 234 LEU B 236 5 3 HELIX 32 32 THR B 253 THR B 267 1 15 HELIX 33 33 ASN B 279 GLY B 283 5 5 HELIX 34 34 THR B 285 PHE B 304 1 20 SHEET 1 A 8 ASP A 46 ASP A 52 0 SHEET 2 A 8 THR A 7 ALA A 13 1 N ILE A 10 O TYR A 50 SHEET 3 A 8 ILE A 93 GLY A 98 1 O ILE A 93 N THR A 7 SHEET 4 A 8 LEU A 270 MET A 276 1 O LEU A 273 N VAL A 96 SHEET 5 A 8 ILE A 227 ASP A 232 1 N ILE A 227 O SER A 271 SHEET 6 A 8 GLY A 119 VAL A 123 1 N ILE A 121 O HIS A 228 SHEET 7 A 8 ILE A 174 LEU A 179 1 O VAL A 175 N TRP A 122 SHEET 8 A 8 LYS A 196 SER A 199 1 O PHE A 198 N GLY A 178 SHEET 1 B 8 ASP B 46 ASP B 52 0 SHEET 2 B 8 THR B 7 GLY B 12 1 N ILE B 10 O TYR B 50 SHEET 3 B 8 ILE B 93 LEU B 97 1 O ILE B 93 N GLY B 9 SHEET 4 B 8 LEU B 270 MET B 276 1 O LEU B 273 N VAL B 96 SHEET 5 B 8 ILE B 227 ASP B 232 1 N ILE B 227 O SER B 271 SHEET 6 B 8 GLY B 119 VAL B 123 1 N VAL B 123 O ASP B 232 SHEET 7 B 8 ILE B 174 LEU B 179 1 O VAL B 175 N TRP B 122 SHEET 8 B 8 LYS B 196 SER B 199 1 O PHE B 198 N GLY B 178 LINK ND1 HIS A 101 MN MN A 903 1555 1555 2.20 LINK OD1 ASP A 124 MN MN A 902 1555 1555 2.12 LINK OD2 ASP A 124 MN MN A 903 1555 1555 2.04 LINK ND1 HIS A 126 MN MN A 902 1555 1555 2.31 LINK OD1 ASP A 128 MN MN A 903 1555 1555 2.24 LINK OD2 ASP A 232 MN MN A 902 1555 1555 2.54 LINK OD2 ASP A 232 MN MN A 903 1555 1555 2.25 LINK OD2 ASP A 234 MN MN A 902 1555 1555 2.10 LINK OD1 ASP A 234 MN MN A 902 1555 1555 2.50 LINK O22 X8A A 901 MN MN A 902 1555 1555 2.21 LINK O20 X8A A 901 MN MN A 902 1555 1555 2.75 LINK O21 X8A A 901 MN MN A 903 1555 1555 2.33 LINK O22 X8A A 901 MN MN A 903 1555 1555 2.43 LINK ND1 HIS B 101 MN MN B 403 1555 1555 2.29 LINK OD1 ASP B 124 MN MN B 402 1555 1555 2.25 LINK OD2 ASP B 124 MN MN B 403 1555 1555 2.06 LINK ND1 HIS B 126 MN MN B 402 1555 1555 2.39 LINK OD1 ASP B 128 MN MN B 403 1555 1555 2.22 LINK OD2 ASP B 232 MN MN B 402 1555 1555 2.40 LINK OD2 ASP B 232 MN MN B 403 1555 1555 2.32 LINK OD2 ASP B 234 MN MN B 402 1555 1555 2.00 LINK OD1 ASP B 234 MN MN B 402 1555 1555 2.59 LINK O22 X8A B 401 MN MN B 402 1555 1555 2.12 LINK O20 X8A B 401 MN MN B 402 1555 1555 2.59 LINK O21 X8A B 401 MN MN B 403 1555 1555 2.29 LINK O22 X8A B 401 MN MN B 403 1555 1555 2.42 CISPEP 1 GLY A 98 GLY A 99 0 2.15 CISPEP 2 GLY B 98 GLY B 99 0 3.65 SITE 1 AC1 19 HIS A 101 ASP A 124 HIS A 126 ASP A 128 SITE 2 AC1 19 ASN A 130 SER A 137 HIS A 141 ASP A 181 SITE 3 AC1 19 ASP A 183 ASP A 232 ASP A 234 THR A 246 SITE 4 AC1 19 GLU A 277 MN A 902 MN A 903 HOH A1002 SITE 5 AC1 19 HOH A1023 HOH A1057 HOH A1230 SITE 1 AC2 6 ASP A 124 HIS A 126 ASP A 232 ASP A 234 SITE 2 AC2 6 X8A A 901 MN A 903 SITE 1 AC3 6 HIS A 101 ASP A 124 ASP A 128 ASP A 232 SITE 2 AC3 6 X8A A 901 MN A 902 SITE 1 AC4 18 HIS B 101 ASP B 124 HIS B 126 ASP B 128 SITE 2 AC4 18 ASN B 130 SER B 137 HIS B 141 ASP B 181 SITE 3 AC4 18 ASP B 183 ASP B 232 ASP B 234 THR B 246 SITE 4 AC4 18 GLU B 277 MN B 402 MN B 403 HOH B 502 SITE 5 AC4 18 HOH B 546 HOH B 562 SITE 1 AC5 6 ASP B 124 HIS B 126 ASP B 232 ASP B 234 SITE 2 AC5 6 X8A B 401 MN B 403 SITE 1 AC6 6 HIS B 101 ASP B 124 ASP B 128 ASP B 232 SITE 2 AC6 6 X8A B 401 MN B 402 CRYST1 90.321 90.321 69.534 90.00 90.00 120.00 P 3 6 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.011072 0.006392 0.000000 0.00000 SCALE2 0.000000 0.012784 0.000000 0.00000 SCALE3 0.000000 0.000000 0.014381 0.00000