HEADER PROTON TRANSPORT 14-NOV-12 4HYX TITLE CRYSTAL STRUCTURE ANALYSIS OF THE BACTERIORHODOPSIN IN FACIAL TITLE 2 AMPHIPHILE-4 DMPC BICELLE COMPND MOL_ID: 1; COMPND 2 MOLECULE: BACTERIORHODOPSIN; COMPND 3 CHAIN: A, B; COMPND 4 SYNONYM: BR, BACTERIOOPSIN, BO SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: HALOBACTERIUM SALINARUM; SOURCE 3 ORGANISM_TAXID: 2242; SOURCE 4 STRAIN: S9 KEYWDS FACIAL AMPHIPHILE-4 DMPC BICELLE, ALPHA HELICAL 7 TRANSMEMBRANE KEYWDS 2 PROTEIN, PHOTORECEPTOR, PROTON PUMP, RETINAL BINDING, TRANSMEMBRANE, KEYWDS 3 PROTON TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR S.LEE,C.D.STOUT,Q.ZHANG REVDAT 3 20-NOV-24 4HYX 1 REMARK LINK REVDAT 2 22-MAY-13 4HYX 1 JRNL REVDAT 1 20-MAR-13 4HYX 0 JRNL AUTH S.C.LEE,B.C.BENNETT,W.X.HONG,Y.FU,K.A.BAKER,J.MARCOUX, JRNL AUTH 2 C.V.ROBINSON,A.B.WARD,J.R.HALPERT,R.C.STEVENS,C.D.STOUT, JRNL AUTH 3 M.J.YEAGER,Q.ZHANG JRNL TITL STEROID-BASED FACIAL AMPHIPHILES FOR STABILIZATION AND JRNL TITL 2 CRYSTALLIZATION OF MEMBRANE PROTEINS. JRNL REF PROC.NATL.ACAD.SCI.USA V. 110 E1203 2013 JRNL REFN ISSN 0027-8424 JRNL PMID 23479627 JRNL DOI 10.1073/PNAS.1221442110 REMARK 2 REMARK 2 RESOLUTION. 1.99 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0029 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.99 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.85 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 95.7 REMARK 3 NUMBER OF REFLECTIONS : 32391 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.181 REMARK 3 R VALUE (WORKING SET) : 0.179 REMARK 3 FREE R VALUE : 0.214 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.200 REMARK 3 FREE R VALUE TEST SET COUNT : 1759 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.99 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.05 REMARK 3 REFLECTION IN BIN (WORKING SET) : 1988 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 80.85 REMARK 3 BIN R VALUE (WORKING SET) : 0.1210 REMARK 3 BIN FREE R VALUE SET COUNT : 102 REMARK 3 BIN FREE R VALUE : 0.1680 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3537 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 178 REMARK 3 SOLVENT ATOMS : 39 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 33.36 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.00000 REMARK 3 B22 (A**2) : -0.01000 REMARK 3 B33 (A**2) : 0.00000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.171 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.150 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.061 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.009 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.948 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.933 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3797 ; 0.023 ; 0.020 REMARK 3 BOND LENGTHS OTHERS (A): 3932 ; 0.008 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 5126 ; 2.011 ; 2.006 REMARK 3 BOND ANGLES OTHERS (DEGREES): 9005 ; 1.460 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 454 ; 5.067 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 118 ;32.702 ;22.203 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 571 ;15.120 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 14 ;18.124 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 589 ; 0.159 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 4022 ; 0.014 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 852 ; 0.008 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NCS TYPE: LOCAL REMARK 3 NUMBER OF DIFFERENT NCS PAIRS : 1 REMARK 3 GROUP CHAIN1 RANGE CHAIN2 RANGE COUNT RMS WEIGHT REMARK 3 1 A 6 230 B 6 230 14105 0.06 0.05 REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : NULL REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4HYX COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 15-NOV-12. REMARK 100 THE DEPOSITION ID IS D_1000076093. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 15-APR-11 REMARK 200 TEMPERATURE (KELVIN) : 100.0 REMARK 200 PH : 3.4 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL11-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97945 REMARK 200 MONOCHROMATOR : SLIDE SCATTERING BENT CUBE-ROOT REMARK 200 I-BEAM SINGLE CRYSTAL; REMARK 200 ASYMMETRIC CUT 4.965 DEGS REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 32607 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.000 REMARK 200 RESOLUTION RANGE LOW (A) : 56.460 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 0.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 92.6 REMARK 200 DATA REDUNDANCY : 2.100 REMARK 200 R MERGE (I) : 0.07400 REMARK 200 R SYM (I) : NULL REMARK 200 <I/SIGMA(I)> FOR THE DATA SET : 6.1000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.00 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 2.11 REMARK 200 COMPLETENESS FOR SHELL (%) : 86.0 REMARK 200 DATA REDUNDANCY IN SHELL : 2.10 REMARK 200 R MERGE FOR SHELL (I) : 0.39900 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 <I/SIGMA(I)> FOR SHELL : 2.000 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASES REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 47.87 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.36 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 3.6M SODIUM PHOSPHATE (PH 3.4), 3.5% REMARK 280 TRIETHYLENEGLYCOL, 180MM HEXANEDIOL, VAPOR DIFFUSION, SITTING REMARK 280 DROP, TEMPERATURE 300.15K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 1 21 1 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,Y+1/2,-Z REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 1.000000 0.000000 56.46000 REMARK 290 SMTRY3 2 0.000000 0.000000 -1.000000 0.00000 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1, 2 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 REMARK 350 BIOMOLECULE: 2 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A -12 REMARK 465 LEU A -11 REMARK 465 GLU A -10 REMARK 465 LEU A -9 REMARK 465 LEU A -8 REMARK 465 PRO A -7 REMARK 465 THR A -6 REMARK 465 ALA A -5 REMARK 465 VAL A -4 REMARK 465 GLU A -3 REMARK 465 GLY A -2 REMARK 465 VAL A -1 REMARK 465 SER A 0 REMARK 465 GLN A 1 REMARK 465 ALA A 2 REMARK 465 GLN A 3 REMARK 465 ILE A 4 REMARK 465 THR A 5 REMARK 465 GLU A 232 REMARK 465 ALA A 233 REMARK 465 GLU A 234 REMARK 465 ALA A 235 REMARK 465 PRO A 236 REMARK 465 GLU A 237 REMARK 465 PRO A 238 REMARK 465 SER A 239 REMARK 465 ALA A 240 REMARK 465 GLY A 241 REMARK 465 ASP A 242 REMARK 465 GLY A 243 REMARK 465 ALA A 244 REMARK 465 ALA A 245 REMARK 465 ALA A 246 REMARK 465 THR A 247 REMARK 465 SER A 248 REMARK 465 ASP A 249 REMARK 465 MET B -12 REMARK 465 LEU B -11 REMARK 465 GLU B -10 REMARK 465 LEU B -9 REMARK 465 LEU B -8 REMARK 465 PRO B -7 REMARK 465 THR B -6 REMARK 465 ALA B -5 REMARK 465 VAL B -4 REMARK 465 GLU B -3 REMARK 465 GLY B -2 REMARK 465 VAL B -1 REMARK 465 SER B 0 REMARK 465 GLN B 1 REMARK 465 ALA B 2 REMARK 465 GLN B 3 REMARK 465 ILE B 4 REMARK 465 THR B 5 REMARK 465 GLY B 231 REMARK 465 GLU B 232 REMARK 465 ALA B 233 REMARK 465 ALA B 240 REMARK 465 GLY B 241 REMARK 465 ASP B 242 REMARK 465 GLY B 243 REMARK 465 ALA B 244 REMARK 465 ALA B 245 REMARK 465 ALA B 246 REMARK 465 THR B 247 REMARK 465 SER B 248 REMARK 465 ASP B 249 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 MET A 209 CG - SD - CE ANGL. DEV. = -12.8 DEGREES REMARK 500 MET B 60 CG - SD - CE ANGL. DEV. = 9.9 DEGREES REMARK 500 MET B 209 CG - SD - CE ANGL. DEV. = -12.9 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 PHE A 71 148.08 -174.02 REMARK 500 ARG B 7 135.52 -39.67 REMARK 500 PHE B 71 146.75 -170.44 REMARK 500 LYS B 216 -64.09 -107.80 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RET A 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D10 A 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D10 A 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D10 A 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D10 A 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D10 A 307 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC7 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OCT A 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC8 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE RET B 301 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC9 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D10 B 302 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D10 B 303 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE HEX B 304 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC3 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE C14 B 305 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC4 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE OCT B 306 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC5 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE D10 B 308 REMARK 800 REMARK 800 SITE_IDENTIFIER: BC6 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL B 309 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 4HWL RELATED DB: PDB REMARK 900 THE SAME PROTEIN WITH FACIAL AMPHIPHILE-7 DMPC BICELLE. DBREF 4HYX A -12 249 UNP P02945 BACR_HALSA 1 262 DBREF 4HYX B -12 249 UNP P02945 BACR_HALSA 1 262 SEQRES 1 A 262 MET LEU GLU LEU LEU PRO THR ALA VAL GLU GLY VAL SER SEQRES 2 A 262 GLN ALA GLN ILE THR GLY ARG PRO GLU TRP ILE TRP LEU SEQRES 3 A 262 ALA LEU GLY THR ALA LEU MET GLY LEU GLY THR LEU TYR SEQRES 4 A 262 PHE LEU VAL LYS GLY MET GLY VAL SER ASP PRO ASP ALA SEQRES 5 A 262 LYS LYS PHE TYR ALA ILE THR THR LEU VAL PRO ALA ILE SEQRES 6 A 262 ALA PHE THR MET TYR LEU SER MET LEU LEU GLY TYR GLY SEQRES 7 A 262 LEU THR MET VAL PRO PHE GLY GLY GLU GLN ASN PRO ILE SEQRES 8 A 262 TYR TRP ALA ARG TYR ALA ASP TRP LEU PHE THR THR PRO SEQRES 9 A 262 LEU LEU LEU LEU ASP LEU ALA LEU LEU VAL ASP ALA ASP SEQRES 10 A 262 GLN GLY THR ILE LEU ALA LEU VAL GLY ALA ASP GLY ILE SEQRES 11 A 262 MET ILE GLY THR GLY LEU VAL GLY ALA LEU THR LYS VAL SEQRES 12 A 262 TYR SER TYR ARG PHE VAL TRP TRP ALA ILE SER THR ALA SEQRES 13 A 262 ALA MET LEU TYR ILE LEU TYR VAL LEU PHE PHE GLY PHE SEQRES 14 A 262 THR SER LYS ALA GLU SER MET ARG PRO GLU VAL ALA SER SEQRES 15 A 262 THR PHE LYS VAL LEU ARG ASN VAL THR VAL VAL LEU TRP SEQRES 16 A 262 SER ALA TYR PRO VAL VAL TRP LEU ILE GLY SER GLU GLY SEQRES 17 A 262 ALA GLY ILE VAL PRO LEU ASN ILE GLU THR LEU LEU PHE SEQRES 18 A 262 MET VAL LEU ASP VAL SER ALA LYS VAL GLY PHE GLY LEU SEQRES 19 A 262 ILE LEU LEU ARG SER ARG ALA ILE PHE GLY GLU ALA GLU SEQRES 20 A 262 ALA PRO GLU PRO SER ALA GLY ASP GLY ALA ALA ALA THR SEQRES 21 A 262 SER ASP SEQRES 1 B 262 MET LEU GLU LEU LEU PRO THR ALA VAL GLU GLY VAL SER SEQRES 2 B 262 GLN ALA GLN ILE THR GLY ARG PRO GLU TRP ILE TRP LEU SEQRES 3 B 262 ALA LEU GLY THR ALA LEU MET GLY LEU GLY THR LEU TYR SEQRES 4 B 262 PHE LEU VAL LYS GLY MET GLY VAL SER ASP PRO ASP ALA SEQRES 5 B 262 LYS LYS PHE TYR ALA ILE THR THR LEU VAL PRO ALA ILE SEQRES 6 B 262 ALA PHE THR MET TYR LEU SER MET LEU LEU GLY TYR GLY SEQRES 7 B 262 LEU THR MET VAL PRO PHE GLY GLY GLU GLN ASN PRO ILE SEQRES 8 B 262 TYR TRP ALA ARG TYR ALA ASP TRP LEU PHE THR THR PRO SEQRES 9 B 262 LEU LEU LEU LEU ASP LEU ALA LEU LEU VAL ASP ALA ASP SEQRES 10 B 262 GLN GLY THR ILE LEU ALA LEU VAL GLY ALA ASP GLY ILE SEQRES 11 B 262 MET ILE GLY THR GLY LEU VAL GLY ALA LEU THR LYS VAL SEQRES 12 B 262 TYR SER TYR ARG PHE VAL TRP TRP ALA ILE SER THR ALA SEQRES 13 B 262 ALA MET LEU TYR ILE LEU TYR VAL LEU PHE PHE GLY PHE SEQRES 14 B 262 THR SER LYS ALA GLU SER MET ARG PRO GLU VAL ALA SER SEQRES 15 B 262 THR PHE LYS VAL LEU ARG ASN VAL THR VAL VAL LEU TRP SEQRES 16 B 262 SER ALA TYR PRO VAL VAL TRP LEU ILE GLY SER GLU GLY SEQRES 17 B 262 ALA GLY ILE VAL PRO LEU ASN ILE GLU THR LEU LEU PHE SEQRES 18 B 262 MET VAL LEU ASP VAL SER ALA LYS VAL GLY PHE GLY LEU SEQRES 19 B 262 ILE LEU LEU ARG SER ARG ALA ILE PHE GLY GLU ALA GLU SEQRES 20 B 262 ALA PRO GLU PRO SER ALA GLY ASP GLY ALA ALA ALA THR SEQRES 21 B 262 SER ASP HET RET A 301 20 HET OCT A 302 8 HET D10 A 303 10 HET D10 A 304 10 HET D10 A 305 10 HET D10 A 306 10 HET D10 A 307 10 HET OCT A 308 8 HET RET B 301 20 HET D10 B 302 10 HET D10 B 303 10 HET HEX B 304 6 HET C14 B 305 14 HET OCT B 306 8 HET OCT B 307 8 HET D10 B 308 10 HET GOL B 309 6 HETNAM RET RETINAL HETNAM OCT N-OCTANE HETNAM D10 DECANE HETNAM HEX HEXANE HETNAM C14 TETRADECANE HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 3 RET 2(C20 H28 O) FORMUL 4 OCT 4(C8 H18) FORMUL 5 D10 8(C10 H22) FORMUL 14 HEX C6 H14 FORMUL 15 C14 C14 H30 FORMUL 19 GOL C3 H8 O3 FORMUL 20 HOH *39(H2 O) HELIX 1 1 GLU A 9 GLY A 33 1 25 HELIX 2 2 ASP A 36 LEU A 62 1 27 HELIX 3 3 TRP A 80 VAL A 101 1 22 HELIX 4 4 ASP A 104 THR A 128 1 25 HELIX 5 5 VAL A 130 GLU A 161 1 32 HELIX 6 6 ARG A 164 GLY A 192 1 29 HELIX 7 7 PRO A 200 ARG A 225 1 26 HELIX 8 8 SER A 226 PHE A 230 5 5 HELIX 9 9 GLU B 9 GLY B 33 1 25 HELIX 10 10 ASP B 36 LEU B 62 1 27 HELIX 11 11 TRP B 80 VAL B 101 1 22 HELIX 12 12 ASP B 104 THR B 128 1 25 HELIX 13 13 VAL B 130 GLU B 161 1 32 HELIX 14 14 ARG B 164 GLY B 192 1 29 HELIX 15 15 PRO B 200 ARG B 225 1 26 HELIX 16 16 SER B 226 PHE B 230 5 5 SHEET 1 A 2 LEU A 66 PHE A 71 0 SHEET 2 A 2 GLU A 74 TYR A 79 -1 O ILE A 78 N THR A 67 SHEET 1 B 2 LEU B 66 PHE B 71 0 SHEET 2 B 2 GLU B 74 TYR B 79 -1 O ASN B 76 N VAL B 69 LINK NZ LYS A 216 C15 RET A 301 1555 1555 1.97 LINK NZ LYS B 216 C15 RET B 301 1555 1555 1.83 SITE 1 AC1 11 TRP A 86 THR A 90 LEU A 93 SER A 141 SITE 2 AC1 11 THR A 142 TRP A 182 TYR A 185 PRO A 186 SITE 3 AC1 11 TRP A 189 ASP A 212 LYS A 216 SITE 1 AC2 2 D10 A 307 PHE B 135 SITE 1 AC3 1 ASN A 176 SITE 1 AC4 2 LYS A 41 ILE A 45 SITE 1 AC5 1 GLY A 106 SITE 1 AC6 1 D10 A 303 SITE 1 AC7 5 MET A 145 SER A 183 PRO A 186 MET B 145 SITE 2 AC7 5 SER B 183 SITE 1 AC8 13 TRP B 86 THR B 90 MET B 118 TRP B 138 SITE 2 AC8 13 SER B 141 THR B 142 TRP B 182 TYR B 185 SITE 3 AC8 13 PRO B 186 TRP B 189 ASP B 212 ALA B 215 SITE 4 AC8 13 LYS B 216 SITE 1 AC9 4 VAL B 124 THR B 128 LYS B 129 TRP B 137 SITE 1 BC1 1 LEU B 95 SITE 1 BC2 4 GLY B 106 LEU B 109 ALA B 110 C14 B 305 SITE 1 BC3 4 ILE B 140 ALA B 144 TYR B 147 HEX B 304 SITE 1 BC4 1 ASN B 176 SITE 1 BC5 2 VAL A 136 LEU A 190 SITE 1 BC6 10 PRO B 77 ILE B 78 TYR B 79 ARG B 82 SITE 2 BC6 10 SER B 193 GLU B 194 LEU B 201 THR B 205 SITE 3 BC6 10 HOH B 411 HOH B 415 CRYST1 45.890 112.920 56.290 90.00 113.83 90.00 P 1 21 1 4 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.021791 0.000000 0.009625 0.00000 SCALE2 0.000000 0.008856 0.000000 0.00000 SCALE3 0.000000 0.000000 0.019421 0.00000