data_4I3S # _entry.id 4I3S # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.397 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4I3S pdb_00004i3s 10.2210/pdb4i3s/pdb RCSB RCSB076267 ? ? WWPDB D_1000076267 ? ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-01-09 2 'Structure model' 1 1 2013-01-23 3 'Structure model' 1 2 2013-02-13 4 'Structure model' 1 3 2021-05-26 5 'Structure model' 1 4 2023-09-20 6 'Structure model' 1 5 2023-12-27 7 'Structure model' 1 6 2024-10-30 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Database references' 2 3 'Structure model' 'Database references' 3 4 'Structure model' 'Derived calculations' 4 4 'Structure model' 'Source and taxonomy' 5 5 'Structure model' 'Data collection' 6 5 'Structure model' 'Database references' 7 5 'Structure model' 'Refinement description' 8 6 'Structure model' 'Derived calculations' 9 7 'Structure model' 'Structure summary' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 4 'Structure model' entity_src_gen 2 4 'Structure model' struct_conn 3 4 'Structure model' struct_conn_type 4 4 'Structure model' struct_site 5 5 'Structure model' chem_comp_atom 6 5 'Structure model' chem_comp_bond 7 5 'Structure model' database_2 8 5 'Structure model' pdbx_initial_refinement_model 9 6 'Structure model' struct_conn 10 6 'Structure model' struct_conn_type 11 7 'Structure model' pdbx_entry_details 12 7 'Structure model' pdbx_modification_feature # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 4 'Structure model' '_entity_src_gen.gene_src_common_name' 2 4 'Structure model' '_entity_src_gen.host_org_common_name' 3 4 'Structure model' '_entity_src_gen.pdbx_host_org_cell_line' 4 4 'Structure model' '_entity_src_gen.pdbx_host_org_strain' 5 4 'Structure model' '_struct_conn.conn_type_id' 6 4 'Structure model' '_struct_conn.id' 7 4 'Structure model' '_struct_conn.pdbx_dist_value' 8 4 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 9 4 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 10 4 'Structure model' '_struct_conn.ptnr1_auth_comp_id' 11 4 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 12 4 'Structure model' '_struct_conn.ptnr1_label_asym_id' 13 4 'Structure model' '_struct_conn.ptnr1_label_atom_id' 14 4 'Structure model' '_struct_conn.ptnr1_label_comp_id' 15 4 'Structure model' '_struct_conn.ptnr1_label_seq_id' 16 4 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 17 4 'Structure model' '_struct_conn.ptnr2_auth_comp_id' 18 4 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 19 4 'Structure model' '_struct_conn.ptnr2_label_asym_id' 20 4 'Structure model' '_struct_conn.ptnr2_label_atom_id' 21 4 'Structure model' '_struct_conn.ptnr2_label_comp_id' 22 4 'Structure model' '_struct_conn.ptnr2_label_seq_id' 23 4 'Structure model' '_struct_conn_type.id' 24 4 'Structure model' '_struct_site.pdbx_auth_asym_id' 25 4 'Structure model' '_struct_site.pdbx_auth_comp_id' 26 4 'Structure model' '_struct_site.pdbx_auth_seq_id' 27 5 'Structure model' '_database_2.pdbx_DOI' 28 5 'Structure model' '_database_2.pdbx_database_accession' 29 6 'Structure model' '_struct_conn.conn_type_id' 30 6 'Structure model' '_struct_conn.id' 31 6 'Structure model' '_struct_conn.pdbx_dist_value' 32 6 'Structure model' '_struct_conn.pdbx_leaving_atom_flag' 33 6 'Structure model' '_struct_conn.ptnr1_auth_asym_id' 34 6 'Structure model' '_struct_conn.ptnr1_auth_seq_id' 35 6 'Structure model' '_struct_conn.ptnr1_label_asym_id' 36 6 'Structure model' '_struct_conn.ptnr1_label_seq_id' 37 6 'Structure model' '_struct_conn.ptnr2_auth_asym_id' 38 6 'Structure model' '_struct_conn.ptnr2_auth_seq_id' 39 6 'Structure model' '_struct_conn.ptnr2_label_asym_id' 40 6 'Structure model' '_struct_conn.ptnr2_label_seq_id' # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4I3S _pdbx_database_status.recvd_initial_deposition_date 2012-11-26 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 3se9 . unspecified PDB 3ngb . unspecified PDB 3se8 . unspecified PDB 3tyg . unspecified PDB 4I3R . unspecified # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Joyce, M.G.' 1 'Biertumpfel, C.' 2 'Nabel, G.J.' 3 'Kwong, P.D.' 4 # _citation.id primary _citation.title 'Outer Domain of HIV-1 gp120: Antigenic Optimization, Structural Malleability, and Crystal Structure with Antibody VRC-PG04.' _citation.journal_abbrev J.Virol. _citation.journal_volume 87 _citation.page_first 2294 _citation.page_last 2306 _citation.year 2013 _citation.journal_id_ASTM JOVIAM _citation.country US _citation.journal_id_ISSN 0022-538X _citation.journal_id_CSD 0825 _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23236069 _citation.pdbx_database_id_DOI 10.1128/JVI.02717-12 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Joyce, M.G.' 1 ? primary 'Kanekiyo, M.' 2 ? primary 'Xu, L.' 3 ? primary 'Biertumpfel, C.' 4 ? primary 'Boyington, J.C.' 5 ? primary 'Moquin, S.' 6 ? primary 'Shi, W.' 7 ? primary 'Wu, X.' 8 ? primary 'Yang, Y.' 9 ? primary 'Yang, Z.Y.' 10 ? primary 'Zhang, B.' 11 ? primary 'Zheng, A.' 12 ? primary 'Zhou, T.' 13 ? primary 'Zhu, J.' 14 ? primary 'Mascola, J.R.' 15 ? primary 'Kwong, P.D.' 16 ? primary 'Nabel, G.J.' 17 ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Outer domain of HIV-1 gp120 (KER2018 OD4.2.2)' 20774.172 1 ? ? ? ? 2 polymer man 'Heavy chain of VRC-PG04 Fab' 24644.771 1 ? ? ? ? 3 polymer man 'Light chain of VRC-PG04 Fab' 23073.822 1 ? ? ? ? 4 non-polymer syn 'CALCIUM ION' 40.078 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;KPVVSTQLLLNGSLAEKEIRIKSEDISDNAKNIIVQLTKPVLINCARPSNNTQYCVVNRTQWNDTLGQVAIQLRKHWNTC IIFNEPSGGDLEITTHSFNCGGEFFYCNTSDLFNSTWNIEGTASIDGTESNDDITLPCRIKGSGAPPIQGVIRCQSNITG ILLTRDGGSGSGTCETFRPGGGDMRDNWRS ; ;KPVVSTQLLLNGSLAEKEIRIKSEDISDNAKNIIVQLTKPVLINCARPSNNTQYCVVNRTQWNDTLGQVAIQLRKHWNTC IIFNEPSGGDLEITTHSFNCGGEFFYCNTSDLFNSTWNIEGTASIDGTESNDDITLPCRIKGSGAPPIQGVIRCQSNITG ILLTRDGGSGSGTCETFRPGGGDMRDNWRS ; G ? 2 'polypeptide(L)' no no ;QVQLVQSGSGVKKPGASVRVSCWTSEDIFERTELIHWVRQAPGQGLEWIGWVKTVTGAVNFGSPDFRQRVSLTRDRDLFT AHMDIRGLTQGDTATYFCARQKFYTGGQGWYFDLWGRGTLIVVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ; ;QVQLVQSGSGVKKPGASVRVSCWTSEDIFERTELIHWVRQAPGQGLEWIGWVKTVTGAVNFGSPDFRQRVSLTRDRDLFT AHMDIRGLTQGDTATYFCARQKFYTGGQGWYFDLWGRGTLIVVSSASTKGPSVFPLAPSSKSTSGGTAALGCLVKDYFPE PVTVSWNSGALTSGVHTFPAVLQSSGLYSLSSVVTVPSSSLGTQTYICNVNHKPSNTKVDKKVEPKSC ; H ? 3 'polypeptide(L)' no no ;EIVLTQSPGTLSLSPGETASLSCTAASYGHMTWYQKKPGQPPKLLIFATSKRASGIPDRFSGSQFGKQYTLTITRMEPED FARYYCQQLEFFGQGTRLEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; ;EIVLTQSPGTLSLSPGETASLSCTAASYGHMTWYQKKPGQPPKLLIFATSKRASGIPDRFSGSQFGKQYTLTITRMEPED FARYYCQQLEFFGQGTRLEIRRTVAAPSVFIFPPSDEQLKSGTASVVCLLNNFYPREAKVQWKVDNALQSGNSQESVTEQ DSKDSTYSLSSTLTLSKADYEKHKVYACEVTHQGLSSPVTKSFNRGEC ; L ? # _pdbx_entity_nonpoly.entity_id 4 _pdbx_entity_nonpoly.name 'CALCIUM ION' _pdbx_entity_nonpoly.comp_id CA # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 LYS n 1 2 PRO n 1 3 VAL n 1 4 VAL n 1 5 SER n 1 6 THR n 1 7 GLN n 1 8 LEU n 1 9 LEU n 1 10 LEU n 1 11 ASN n 1 12 GLY n 1 13 SER n 1 14 LEU n 1 15 ALA n 1 16 GLU n 1 17 LYS n 1 18 GLU n 1 19 ILE n 1 20 ARG n 1 21 ILE n 1 22 LYS n 1 23 SER n 1 24 GLU n 1 25 ASP n 1 26 ILE n 1 27 SER n 1 28 ASP n 1 29 ASN n 1 30 ALA n 1 31 LYS n 1 32 ASN n 1 33 ILE n 1 34 ILE n 1 35 VAL n 1 36 GLN n 1 37 LEU n 1 38 THR n 1 39 LYS n 1 40 PRO n 1 41 VAL n 1 42 LEU n 1 43 ILE n 1 44 ASN n 1 45 CYS n 1 46 ALA n 1 47 ARG n 1 48 PRO n 1 49 SER n 1 50 ASN n 1 51 ASN n 1 52 THR n 1 53 GLN n 1 54 TYR n 1 55 CYS n 1 56 VAL n 1 57 VAL n 1 58 ASN n 1 59 ARG n 1 60 THR n 1 61 GLN n 1 62 TRP n 1 63 ASN n 1 64 ASP n 1 65 THR n 1 66 LEU n 1 67 GLY n 1 68 GLN n 1 69 VAL n 1 70 ALA n 1 71 ILE n 1 72 GLN n 1 73 LEU n 1 74 ARG n 1 75 LYS n 1 76 HIS n 1 77 TRP n 1 78 ASN n 1 79 THR n 1 80 CYS n 1 81 ILE n 1 82 ILE n 1 83 PHE n 1 84 ASN n 1 85 GLU n 1 86 PRO n 1 87 SER n 1 88 GLY n 1 89 GLY n 1 90 ASP n 1 91 LEU n 1 92 GLU n 1 93 ILE n 1 94 THR n 1 95 THR n 1 96 HIS n 1 97 SER n 1 98 PHE n 1 99 ASN n 1 100 CYS n 1 101 GLY n 1 102 GLY n 1 103 GLU n 1 104 PHE n 1 105 PHE n 1 106 TYR n 1 107 CYS n 1 108 ASN n 1 109 THR n 1 110 SER n 1 111 ASP n 1 112 LEU n 1 113 PHE n 1 114 ASN n 1 115 SER n 1 116 THR n 1 117 TRP n 1 118 ASN n 1 119 ILE n 1 120 GLU n 1 121 GLY n 1 122 THR n 1 123 ALA n 1 124 SER n 1 125 ILE n 1 126 ASP n 1 127 GLY n 1 128 THR n 1 129 GLU n 1 130 SER n 1 131 ASN n 1 132 ASP n 1 133 ASP n 1 134 ILE n 1 135 THR n 1 136 LEU n 1 137 PRO n 1 138 CYS n 1 139 ARG n 1 140 ILE n 1 141 LYS n 1 142 GLY n 1 143 SER n 1 144 GLY n 1 145 ALA n 1 146 PRO n 1 147 PRO n 1 148 ILE n 1 149 GLN n 1 150 GLY n 1 151 VAL n 1 152 ILE n 1 153 ARG n 1 154 CYS n 1 155 GLN n 1 156 SER n 1 157 ASN n 1 158 ILE n 1 159 THR n 1 160 GLY n 1 161 ILE n 1 162 LEU n 1 163 LEU n 1 164 THR n 1 165 ARG n 1 166 ASP n 1 167 GLY n 1 168 GLY n 1 169 SER n 1 170 GLY n 1 171 SER n 1 172 GLY n 1 173 THR n 1 174 CYS n 1 175 GLU n 1 176 THR n 1 177 PHE n 1 178 ARG n 1 179 PRO n 1 180 GLY n 1 181 GLY n 1 182 GLY n 1 183 ASP n 1 184 MET n 1 185 ARG n 1 186 ASP n 1 187 ASN n 1 188 TRP n 1 189 ARG n 1 190 SER n 2 1 GLN n 2 2 VAL n 2 3 GLN n 2 4 LEU n 2 5 VAL n 2 6 GLN n 2 7 SER n 2 8 GLY n 2 9 SER n 2 10 GLY n 2 11 VAL n 2 12 LYS n 2 13 LYS n 2 14 PRO n 2 15 GLY n 2 16 ALA n 2 17 SER n 2 18 VAL n 2 19 ARG n 2 20 VAL n 2 21 SER n 2 22 CYS n 2 23 TRP n 2 24 THR n 2 25 SER n 2 26 GLU n 2 27 ASP n 2 28 ILE n 2 29 PHE n 2 30 GLU n 2 31 ARG n 2 32 THR n 2 33 GLU n 2 34 LEU n 2 35 ILE n 2 36 HIS n 2 37 TRP n 2 38 VAL n 2 39 ARG n 2 40 GLN n 2 41 ALA n 2 42 PRO n 2 43 GLY n 2 44 GLN n 2 45 GLY n 2 46 LEU n 2 47 GLU n 2 48 TRP n 2 49 ILE n 2 50 GLY n 2 51 TRP n 2 52 VAL n 2 53 LYS n 2 54 THR n 2 55 VAL n 2 56 THR n 2 57 GLY n 2 58 ALA n 2 59 VAL n 2 60 ASN n 2 61 PHE n 2 62 GLY n 2 63 SER n 2 64 PRO n 2 65 ASP n 2 66 PHE n 2 67 ARG n 2 68 GLN n 2 69 ARG n 2 70 VAL n 2 71 SER n 2 72 LEU n 2 73 THR n 2 74 ARG n 2 75 ASP n 2 76 ARG n 2 77 ASP n 2 78 LEU n 2 79 PHE n 2 80 THR n 2 81 ALA n 2 82 HIS n 2 83 MET n 2 84 ASP n 2 85 ILE n 2 86 ARG n 2 87 GLY n 2 88 LEU n 2 89 THR n 2 90 GLN n 2 91 GLY n 2 92 ASP n 2 93 THR n 2 94 ALA n 2 95 THR n 2 96 TYR n 2 97 PHE n 2 98 CYS n 2 99 ALA n 2 100 ARG n 2 101 GLN n 2 102 LYS n 2 103 PHE n 2 104 TYR n 2 105 THR n 2 106 GLY n 2 107 GLY n 2 108 GLN n 2 109 GLY n 2 110 TRP n 2 111 TYR n 2 112 PHE n 2 113 ASP n 2 114 LEU n 2 115 TRP n 2 116 GLY n 2 117 ARG n 2 118 GLY n 2 119 THR n 2 120 LEU n 2 121 ILE n 2 122 VAL n 2 123 VAL n 2 124 SER n 2 125 SER n 2 126 ALA n 2 127 SER n 2 128 THR n 2 129 LYS n 2 130 GLY n 2 131 PRO n 2 132 SER n 2 133 VAL n 2 134 PHE n 2 135 PRO n 2 136 LEU n 2 137 ALA n 2 138 PRO n 2 139 SER n 2 140 SER n 2 141 LYS n 2 142 SER n 2 143 THR n 2 144 SER n 2 145 GLY n 2 146 GLY n 2 147 THR n 2 148 ALA n 2 149 ALA n 2 150 LEU n 2 151 GLY n 2 152 CYS n 2 153 LEU n 2 154 VAL n 2 155 LYS n 2 156 ASP n 2 157 TYR n 2 158 PHE n 2 159 PRO n 2 160 GLU n 2 161 PRO n 2 162 VAL n 2 163 THR n 2 164 VAL n 2 165 SER n 2 166 TRP n 2 167 ASN n 2 168 SER n 2 169 GLY n 2 170 ALA n 2 171 LEU n 2 172 THR n 2 173 SER n 2 174 GLY n 2 175 VAL n 2 176 HIS n 2 177 THR n 2 178 PHE n 2 179 PRO n 2 180 ALA n 2 181 VAL n 2 182 LEU n 2 183 GLN n 2 184 SER n 2 185 SER n 2 186 GLY n 2 187 LEU n 2 188 TYR n 2 189 SER n 2 190 LEU n 2 191 SER n 2 192 SER n 2 193 VAL n 2 194 VAL n 2 195 THR n 2 196 VAL n 2 197 PRO n 2 198 SER n 2 199 SER n 2 200 SER n 2 201 LEU n 2 202 GLY n 2 203 THR n 2 204 GLN n 2 205 THR n 2 206 TYR n 2 207 ILE n 2 208 CYS n 2 209 ASN n 2 210 VAL n 2 211 ASN n 2 212 HIS n 2 213 LYS n 2 214 PRO n 2 215 SER n 2 216 ASN n 2 217 THR n 2 218 LYS n 2 219 VAL n 2 220 ASP n 2 221 LYS n 2 222 LYS n 2 223 VAL n 2 224 GLU n 2 225 PRO n 2 226 LYS n 2 227 SER n 2 228 CYS n 3 1 GLU n 3 2 ILE n 3 3 VAL n 3 4 LEU n 3 5 THR n 3 6 GLN n 3 7 SER n 3 8 PRO n 3 9 GLY n 3 10 THR n 3 11 LEU n 3 12 SER n 3 13 LEU n 3 14 SER n 3 15 PRO n 3 16 GLY n 3 17 GLU n 3 18 THR n 3 19 ALA n 3 20 SER n 3 21 LEU n 3 22 SER n 3 23 CYS n 3 24 THR n 3 25 ALA n 3 26 ALA n 3 27 SER n 3 28 TYR n 3 29 GLY n 3 30 HIS n 3 31 MET n 3 32 THR n 3 33 TRP n 3 34 TYR n 3 35 GLN n 3 36 LYS n 3 37 LYS n 3 38 PRO n 3 39 GLY n 3 40 GLN n 3 41 PRO n 3 42 PRO n 3 43 LYS n 3 44 LEU n 3 45 LEU n 3 46 ILE n 3 47 PHE n 3 48 ALA n 3 49 THR n 3 50 SER n 3 51 LYS n 3 52 ARG n 3 53 ALA n 3 54 SER n 3 55 GLY n 3 56 ILE n 3 57 PRO n 3 58 ASP n 3 59 ARG n 3 60 PHE n 3 61 SER n 3 62 GLY n 3 63 SER n 3 64 GLN n 3 65 PHE n 3 66 GLY n 3 67 LYS n 3 68 GLN n 3 69 TYR n 3 70 THR n 3 71 LEU n 3 72 THR n 3 73 ILE n 3 74 THR n 3 75 ARG n 3 76 MET n 3 77 GLU n 3 78 PRO n 3 79 GLU n 3 80 ASP n 3 81 PHE n 3 82 ALA n 3 83 ARG n 3 84 TYR n 3 85 TYR n 3 86 CYS n 3 87 GLN n 3 88 GLN n 3 89 LEU n 3 90 GLU n 3 91 PHE n 3 92 PHE n 3 93 GLY n 3 94 GLN n 3 95 GLY n 3 96 THR n 3 97 ARG n 3 98 LEU n 3 99 GLU n 3 100 ILE n 3 101 ARG n 3 102 ARG n 3 103 THR n 3 104 VAL n 3 105 ALA n 3 106 ALA n 3 107 PRO n 3 108 SER n 3 109 VAL n 3 110 PHE n 3 111 ILE n 3 112 PHE n 3 113 PRO n 3 114 PRO n 3 115 SER n 3 116 ASP n 3 117 GLU n 3 118 GLN n 3 119 LEU n 3 120 LYS n 3 121 SER n 3 122 GLY n 3 123 THR n 3 124 ALA n 3 125 SER n 3 126 VAL n 3 127 VAL n 3 128 CYS n 3 129 LEU n 3 130 LEU n 3 131 ASN n 3 132 ASN n 3 133 PHE n 3 134 TYR n 3 135 PRO n 3 136 ARG n 3 137 GLU n 3 138 ALA n 3 139 LYS n 3 140 VAL n 3 141 GLN n 3 142 TRP n 3 143 LYS n 3 144 VAL n 3 145 ASP n 3 146 ASN n 3 147 ALA n 3 148 LEU n 3 149 GLN n 3 150 SER n 3 151 GLY n 3 152 ASN n 3 153 SER n 3 154 GLN n 3 155 GLU n 3 156 SER n 3 157 VAL n 3 158 THR n 3 159 GLU n 3 160 GLN n 3 161 ASP n 3 162 SER n 3 163 LYS n 3 164 ASP n 3 165 SER n 3 166 THR n 3 167 TYR n 3 168 SER n 3 169 LEU n 3 170 SER n 3 171 SER n 3 172 THR n 3 173 LEU n 3 174 THR n 3 175 LEU n 3 176 SER n 3 177 LYS n 3 178 ALA n 3 179 ASP n 3 180 TYR n 3 181 GLU n 3 182 LYS n 3 183 HIS n 3 184 LYS n 3 185 VAL n 3 186 TYR n 3 187 ALA n 3 188 CYS n 3 189 GLU n 3 190 VAL n 3 191 THR n 3 192 HIS n 3 193 GLN n 3 194 GLY n 3 195 LEU n 3 196 SER n 3 197 SER n 3 198 PRO n 3 199 VAL n 3 200 THR n 3 201 LYS n 3 202 SER n 3 203 PHE n 3 204 ASN n 3 205 ARG n 3 206 GLY n 3 207 GLU n 3 208 CYS n # loop_ _entity_src_gen.entity_id _entity_src_gen.pdbx_src_id _entity_src_gen.pdbx_alt_source_flag _entity_src_gen.pdbx_seq_type _entity_src_gen.pdbx_beg_seq_num _entity_src_gen.pdbx_end_seq_num _entity_src_gen.gene_src_common_name _entity_src_gen.gene_src_genus _entity_src_gen.pdbx_gene_src_gene _entity_src_gen.gene_src_species _entity_src_gen.gene_src_strain _entity_src_gen.gene_src_tissue _entity_src_gen.gene_src_tissue_fraction _entity_src_gen.gene_src_details _entity_src_gen.pdbx_gene_src_fragment _entity_src_gen.pdbx_gene_src_scientific_name _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id _entity_src_gen.pdbx_gene_src_variant _entity_src_gen.pdbx_gene_src_cell_line _entity_src_gen.pdbx_gene_src_atcc _entity_src_gen.pdbx_gene_src_organ _entity_src_gen.pdbx_gene_src_organelle _entity_src_gen.pdbx_gene_src_cell _entity_src_gen.pdbx_gene_src_cellular_location _entity_src_gen.host_org_common_name _entity_src_gen.pdbx_host_org_scientific_name _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id _entity_src_gen.host_org_genus _entity_src_gen.pdbx_host_org_gene _entity_src_gen.pdbx_host_org_organ _entity_src_gen.host_org_species _entity_src_gen.pdbx_host_org_tissue _entity_src_gen.pdbx_host_org_tissue_fraction _entity_src_gen.pdbx_host_org_strain _entity_src_gen.pdbx_host_org_variant _entity_src_gen.pdbx_host_org_cell_line _entity_src_gen.pdbx_host_org_atcc _entity_src_gen.pdbx_host_org_culture_collection _entity_src_gen.pdbx_host_org_cell _entity_src_gen.pdbx_host_org_organelle _entity_src_gen.pdbx_host_org_cellular_location _entity_src_gen.pdbx_host_org_vector_type _entity_src_gen.pdbx_host_org_vector _entity_src_gen.host_org_details _entity_src_gen.expression_system_id _entity_src_gen.plasmid_name _entity_src_gen.plasmid_details _entity_src_gen.pdbx_description 1 1 sample ? ? ? ? ? ? ? ? ? ? ? ? 'Human Immunodeficiency Virus' 12721 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 293S ? ? ? ? ? ? ? ? ? ? ? ? 2 1 sample ? ? ? human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 293F ? ? ? ? ? ? ? ? ? ? ? ? 3 1 sample ? ? ? human ? ? ? ? ? ? ? ? 'Homo sapiens' 9606 ? ? ? ? ? ? ? human 'Homo sapiens' 9606 ? ? ? ? ? ? ? ? 293F ? ? ? ? ? ? ? ? ? ? ? ? # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CA non-polymer . 'CALCIUM ION' ? 'Ca 2' 40.078 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 LYS 1 252 252 LYS LYS G . n A 1 2 PRO 2 253 253 PRO PRO G . n A 1 3 VAL 3 254 254 VAL VAL G . n A 1 4 VAL 4 255 255 VAL VAL G . n A 1 5 SER 5 256 256 SER SER G . n A 1 6 THR 6 257 257 THR THR G . n A 1 7 GLN 7 258 258 GLN GLN G . n A 1 8 LEU 8 259 259 LEU LEU G . n A 1 9 LEU 9 260 260 LEU LEU G . n A 1 10 LEU 10 261 261 LEU LEU G . n A 1 11 ASN 11 262 262 ASN ASN G . n A 1 12 GLY 12 263 263 GLY GLY G . n A 1 13 SER 13 264 264 SER SER G . n A 1 14 LEU 14 265 265 LEU LEU G . n A 1 15 ALA 15 266 266 ALA ALA G . n A 1 16 GLU 16 267 267 GLU GLU G . n A 1 17 LYS 17 268 268 LYS LYS G . n A 1 18 GLU 18 269 269 GLU GLU G . n A 1 19 ILE 19 270 270 ILE ILE G . n A 1 20 ARG 20 271 271 ARG ARG G . n A 1 21 ILE 21 272 272 ILE ILE G . n A 1 22 LYS 22 273 273 LYS LYS G . n A 1 23 SER 23 274 274 SER SER G . n A 1 24 GLU 24 275 275 GLU GLU G . n A 1 25 ASP 25 276 276 ASP ASP G . n A 1 26 ILE 26 277 277 ILE ILE G . n A 1 27 SER 27 278 278 SER SER G . n A 1 28 ASP 28 279 279 ASP ASP G . n A 1 29 ASN 29 280 280 ASN ASN G . n A 1 30 ALA 30 281 281 ALA ALA G . n A 1 31 LYS 31 282 282 LYS LYS G . n A 1 32 ASN 32 283 283 ASN ASN G . n A 1 33 ILE 33 284 284 ILE ILE G . n A 1 34 ILE 34 285 285 ILE ILE G . n A 1 35 VAL 35 286 286 VAL VAL G . n A 1 36 GLN 36 287 287 GLN GLN G . n A 1 37 LEU 37 288 288 LEU LEU G . n A 1 38 THR 38 289 289 THR THR G . n A 1 39 LYS 39 290 290 LYS LYS G . n A 1 40 PRO 40 291 291 PRO PRO G . n A 1 41 VAL 41 292 292 VAL VAL G . n A 1 42 LEU 42 293 293 LEU LEU G . n A 1 43 ILE 43 294 294 ILE ILE G . n A 1 44 ASN 44 295 295 ASN ASN G . n A 1 45 CYS 45 296 296 CYS CYS G . n A 1 46 ALA 46 297 297 ALA ALA G . n A 1 47 ARG 47 298 298 ARG ARG G . n A 1 48 PRO 48 299 299 PRO PRO G . n A 1 49 SER 49 300 300 SER SER G . n A 1 50 ASN 50 301 301 ASN ASN G . n A 1 51 ASN 51 302 302 ASN ASN G . n A 1 52 THR 52 303 303 THR THR G . n A 1 53 GLN 53 304 304 GLN GLN G . n A 1 54 TYR 54 330 330 TYR TYR G . n A 1 55 CYS 55 331 331 CYS CYS G . n A 1 56 VAL 56 332 332 VAL VAL G . n A 1 57 VAL 57 333 333 VAL VAL G . n A 1 58 ASN 58 334 334 ASN ASN G . n A 1 59 ARG 59 335 335 ARG ARG G . n A 1 60 THR 60 336 336 THR THR G . n A 1 61 GLN 61 337 337 GLN GLN G . n A 1 62 TRP 62 338 338 TRP TRP G . n A 1 63 ASN 63 339 339 ASN ASN G . n A 1 64 ASP 64 340 340 ASP ASP G . n A 1 65 THR 65 341 341 THR THR G . n A 1 66 LEU 66 342 342 LEU LEU G . n A 1 67 GLY 67 343 343 GLY GLY G . n A 1 68 GLN 68 344 344 GLN GLN G . n A 1 69 VAL 69 345 345 VAL VAL G . n A 1 70 ALA 70 346 346 ALA ALA G . n A 1 71 ILE 71 347 347 ILE ILE G . n A 1 72 GLN 72 348 348 GLN GLN G . n A 1 73 LEU 73 349 349 LEU LEU G . n A 1 74 ARG 74 350 350 ARG ARG G . n A 1 75 LYS 75 351 351 LYS LYS G . n A 1 76 HIS 76 352 352 HIS HIS G . n A 1 77 TRP 77 353 353 TRP TRP G . n A 1 78 ASN 78 356 356 ASN ASN G . n A 1 79 THR 79 357 357 THR THR G . n A 1 80 CYS 80 358 358 CYS CYS G . n A 1 81 ILE 81 359 359 ILE ILE G . n A 1 82 ILE 82 360 360 ILE ILE G . n A 1 83 PHE 83 361 361 PHE PHE G . n A 1 84 ASN 84 362 362 ASN ASN G . n A 1 85 GLU 85 363 363 GLU GLU G . n A 1 86 PRO 86 364 364 PRO PRO G . n A 1 87 SER 87 365 365 SER SER G . n A 1 88 GLY 88 366 366 GLY GLY G . n A 1 89 GLY 89 367 367 GLY GLY G . n A 1 90 ASP 90 368 368 ASP ASP G . n A 1 91 LEU 91 369 369 LEU LEU G . n A 1 92 GLU 92 370 370 GLU GLU G . n A 1 93 ILE 93 371 371 ILE ILE G . n A 1 94 THR 94 372 372 THR THR G . n A 1 95 THR 95 373 373 THR THR G . n A 1 96 HIS 96 374 374 HIS HIS G . n A 1 97 SER 97 375 375 SER SER G . n A 1 98 PHE 98 376 376 PHE PHE G . n A 1 99 ASN 99 377 377 ASN ASN G . n A 1 100 CYS 100 378 378 CYS CYS G . n A 1 101 GLY 101 379 379 GLY GLY G . n A 1 102 GLY 102 380 380 GLY GLY G . n A 1 103 GLU 103 381 381 GLU GLU G . n A 1 104 PHE 104 382 382 PHE PHE G . n A 1 105 PHE 105 383 383 PHE PHE G . n A 1 106 TYR 106 384 384 TYR TYR G . n A 1 107 CYS 107 385 385 CYS CYS G . n A 1 108 ASN 108 386 386 ASN ASN G . n A 1 109 THR 109 387 387 THR THR G . n A 1 110 SER 110 388 388 SER SER G . n A 1 111 ASP 111 389 389 ASP ASP G . n A 1 112 LEU 112 390 390 LEU LEU G . n A 1 113 PHE 113 391 391 PHE PHE G . n A 1 114 ASN 114 392 392 ASN ASN G . n A 1 115 SER 115 393 393 SER SER G . n A 1 116 THR 116 394 394 THR THR G . n A 1 117 TRP 117 395 395 TRP TRP G . n A 1 118 ASN 118 395 395 ASN ASN G A n A 1 119 ILE 119 396 396 ILE ILE G . n A 1 120 GLU 120 397 397 GLU GLU G . n A 1 121 GLY 121 398 398 GLY GLY G . n A 1 122 THR 122 399 399 THR THR G . n A 1 123 ALA 123 400 400 ALA ALA G . n A 1 124 SER 124 401 401 SER SER G . n A 1 125 ILE 125 402 402 ILE ILE G . n A 1 126 ASP 126 403 403 ASP ASP G . n A 1 127 GLY 127 407 ? ? ? G . n A 1 128 THR 128 408 ? ? ? G . n A 1 129 GLU 129 409 ? ? ? G . n A 1 130 SER 130 410 ? ? ? G . n A 1 131 ASN 131 411 ? ? ? G . n A 1 132 ASP 132 412 ? ? ? G . n A 1 133 ASP 133 413 413 ASP ASP G . n A 1 134 ILE 134 414 414 ILE ILE G . n A 1 135 THR 135 415 415 THR THR G . n A 1 136 LEU 136 416 416 LEU LEU G . n A 1 137 PRO 137 417 417 PRO PRO G . n A 1 138 CYS 138 418 418 CYS CYS G . n A 1 139 ARG 139 419 419 ARG ARG G . n A 1 140 ILE 140 420 420 ILE ILE G . n A 1 141 LYS 141 421 421 LYS LYS G . n A 1 142 GLY 142 431 431 GLY GLY G . n A 1 143 SER 143 432 432 SER SER G . n A 1 144 GLY 144 433 433 GLY GLY G . n A 1 145 ALA 145 436 436 ALA ALA G . n A 1 146 PRO 146 437 437 PRO PRO G . n A 1 147 PRO 147 438 438 PRO PRO G . n A 1 148 ILE 148 439 439 ILE ILE G . n A 1 149 GLN 149 440 440 GLN GLN G . n A 1 150 GLY 150 441 441 GLY GLY G . n A 1 151 VAL 151 442 442 VAL VAL G . n A 1 152 ILE 152 443 443 ILE ILE G . n A 1 153 ARG 153 444 444 ARG ARG G . n A 1 154 CYS 154 445 445 CYS CYS G . n A 1 155 GLN 155 446 446 GLN GLN G . n A 1 156 SER 156 447 447 SER SER G . n A 1 157 ASN 157 448 448 ASN ASN G . n A 1 158 ILE 158 449 449 ILE ILE G . n A 1 159 THR 159 450 450 THR THR G . n A 1 160 GLY 160 451 451 GLY GLY G . n A 1 161 ILE 161 452 452 ILE ILE G . n A 1 162 LEU 162 453 453 LEU LEU G . n A 1 163 LEU 163 454 454 LEU LEU G . n A 1 164 THR 164 455 455 THR THR G . n A 1 165 ARG 165 456 456 ARG ARG G . n A 1 166 ASP 166 457 457 ASP ASP G . n A 1 167 GLY 167 458 458 GLY GLY G . n A 1 168 GLY 168 459 459 GLY GLY G . n A 1 169 SER 169 460 460 SER SER G . n A 1 170 GLY 170 461 461 GLY GLY G . n A 1 171 SER 171 462 462 SER SER G . n A 1 172 GLY 172 463 463 GLY GLY G . n A 1 173 THR 173 464 464 THR THR G . n A 1 174 CYS 174 465 465 CYS CYS G . n A 1 175 GLU 175 466 466 GLU GLU G . n A 1 176 THR 176 467 467 THR THR G . n A 1 177 PHE 177 468 468 PHE PHE G . n A 1 178 ARG 178 469 469 ARG ARG G . n A 1 179 PRO 179 470 470 PRO PRO G . n A 1 180 GLY 180 471 471 GLY GLY G . n A 1 181 GLY 181 472 472 GLY GLY G . n A 1 182 GLY 182 473 473 GLY GLY G . n A 1 183 ASP 183 474 474 ASP ASP G . n A 1 184 MET 184 475 475 MET MET G . n A 1 185 ARG 185 476 476 ARG ARG G . n A 1 186 ASP 186 477 477 ASP ASP G . n A 1 187 ASN 187 478 ? ? ? G . n A 1 188 TRP 188 479 ? ? ? G . n A 1 189 ARG 189 480 ? ? ? G . n A 1 190 SER 190 481 ? ? ? G . n B 2 1 GLN 1 1 1 GLN GLN H . n B 2 2 VAL 2 2 2 VAL VAL H . n B 2 3 GLN 3 3 3 GLN GLN H . n B 2 4 LEU 4 4 4 LEU LEU H . n B 2 5 VAL 5 5 5 VAL VAL H . n B 2 6 GLN 6 6 6 GLN GLN H . n B 2 7 SER 7 7 7 SER SER H . n B 2 8 GLY 8 8 8 GLY GLY H . n B 2 9 SER 9 9 9 SER SER H . n B 2 10 GLY 10 10 10 GLY GLY H . n B 2 11 VAL 11 11 11 VAL VAL H . n B 2 12 LYS 12 12 12 LYS LYS H . n B 2 13 LYS 13 13 13 LYS LYS H . n B 2 14 PRO 14 14 14 PRO PRO H . n B 2 15 GLY 15 15 15 GLY GLY H . n B 2 16 ALA 16 16 16 ALA ALA H . n B 2 17 SER 17 17 17 SER SER H . n B 2 18 VAL 18 18 18 VAL VAL H . n B 2 19 ARG 19 19 19 ARG ARG H . n B 2 20 VAL 20 20 20 VAL VAL H . n B 2 21 SER 21 21 21 SER SER H . n B 2 22 CYS 22 22 22 CYS CYS H . n B 2 23 TRP 23 23 23 TRP TRP H . n B 2 24 THR 24 24 24 THR THR H . n B 2 25 SER 25 25 25 SER SER H . n B 2 26 GLU 26 26 26 GLU GLU H . n B 2 27 ASP 27 27 27 ASP ASP H . n B 2 28 ILE 28 28 28 ILE ILE H . n B 2 29 PHE 29 29 29 PHE PHE H . n B 2 30 GLU 30 30 30 GLU GLU H . n B 2 31 ARG 31 31 31 ARG ARG H . n B 2 32 THR 32 32 32 THR THR H . n B 2 33 GLU 33 33 33 GLU GLU H . n B 2 34 LEU 34 34 34 LEU LEU H . n B 2 35 ILE 35 35 35 ILE ILE H . n B 2 36 HIS 36 35 35 HIS HIS H A n B 2 37 TRP 37 36 36 TRP TRP H . n B 2 38 VAL 38 37 37 VAL VAL H . n B 2 39 ARG 39 38 38 ARG ARG H . n B 2 40 GLN 40 39 39 GLN GLN H . n B 2 41 ALA 41 40 40 ALA ALA H . n B 2 42 PRO 42 41 41 PRO PRO H . n B 2 43 GLY 43 42 42 GLY GLY H . n B 2 44 GLN 44 43 43 GLN GLN H . n B 2 45 GLY 45 44 44 GLY GLY H . n B 2 46 LEU 46 45 45 LEU LEU H . n B 2 47 GLU 47 46 46 GLU GLU H . n B 2 48 TRP 48 47 47 TRP TRP H . n B 2 49 ILE 49 48 48 ILE ILE H . n B 2 50 GLY 50 49 49 GLY GLY H . n B 2 51 TRP 51 50 50 TRP TRP H . n B 2 52 VAL 52 51 51 VAL VAL H . n B 2 53 LYS 53 52 52 LYS LYS H . n B 2 54 THR 54 52 52 THR THR H A n B 2 55 VAL 55 52 52 VAL VAL H B n B 2 56 THR 56 53 53 THR THR H . n B 2 57 GLY 57 54 54 GLY GLY H . n B 2 58 ALA 58 55 55 ALA ALA H . n B 2 59 VAL 59 56 56 VAL VAL H . n B 2 60 ASN 60 57 57 ASN ASN H . n B 2 61 PHE 61 58 58 PHE PHE H . n B 2 62 GLY 62 59 59 GLY GLY H . n B 2 63 SER 63 60 60 SER SER H . n B 2 64 PRO 64 61 61 PRO PRO H . n B 2 65 ASP 65 62 62 ASP ASP H . n B 2 66 PHE 66 63 63 PHE PHE H . n B 2 67 ARG 67 64 64 ARG ARG H . n B 2 68 GLN 68 65 65 GLN GLN H . n B 2 69 ARG 69 66 66 ARG ARG H . n B 2 70 VAL 70 67 67 VAL VAL H . n B 2 71 SER 71 68 68 SER SER H . n B 2 72 LEU 72 69 69 LEU LEU H . n B 2 73 THR 73 70 70 THR THR H . n B 2 74 ARG 74 71 71 ARG ARG H . n B 2 75 ASP 75 72 72 ASP ASP H . n B 2 76 ARG 76 73 73 ARG ARG H . n B 2 77 ASP 77 74 74 ASP ASP H . n B 2 78 LEU 78 75 75 LEU LEU H . n B 2 79 PHE 79 76 76 PHE PHE H . n B 2 80 THR 80 77 77 THR THR H . n B 2 81 ALA 81 78 78 ALA ALA H . n B 2 82 HIS 82 79 79 HIS HIS H . n B 2 83 MET 83 80 80 MET MET H . n B 2 84 ASP 84 81 81 ASP ASP H . n B 2 85 ILE 85 82 82 ILE ILE H . n B 2 86 ARG 86 82 82 ARG ARG H A n B 2 87 GLY 87 82 82 GLY GLY H B n B 2 88 LEU 88 82 82 LEU LEU H C n B 2 89 THR 89 83 83 THR THR H . n B 2 90 GLN 90 84 84 GLN GLN H . n B 2 91 GLY 91 85 85 GLY GLY H . n B 2 92 ASP 92 86 86 ASP ASP H . n B 2 93 THR 93 87 87 THR THR H . n B 2 94 ALA 94 88 88 ALA ALA H . n B 2 95 THR 95 89 89 THR THR H . n B 2 96 TYR 96 90 90 TYR TYR H . n B 2 97 PHE 97 91 91 PHE PHE H . n B 2 98 CYS 98 92 92 CYS CYS H . n B 2 99 ALA 99 93 93 ALA ALA H . n B 2 100 ARG 100 94 94 ARG ARG H . n B 2 101 GLN 101 95 95 GLN GLN H . n B 2 102 LYS 102 96 96 LYS LYS H . n B 2 103 PHE 103 97 97 PHE PHE H . n B 2 104 TYR 104 98 98 TYR TYR H . n B 2 105 THR 105 99 99 THR THR H . n B 2 106 GLY 106 100 100 GLY GLY H . n B 2 107 GLY 107 100 100 GLY GLY H A n B 2 108 GLN 108 100 100 GLN GLN H B n B 2 109 GLY 109 100 100 GLY GLY H C n B 2 110 TRP 110 100 100 TRP TRP H D n B 2 111 TYR 111 100 100 TYR TYR H E n B 2 112 PHE 112 100 100 PHE PHE H F n B 2 113 ASP 113 101 101 ASP ASP H . n B 2 114 LEU 114 102 102 LEU LEU H . n B 2 115 TRP 115 103 103 TRP TRP H . n B 2 116 GLY 116 104 104 GLY GLY H . n B 2 117 ARG 117 105 105 ARG ARG H . n B 2 118 GLY 118 106 106 GLY GLY H . n B 2 119 THR 119 107 107 THR THR H . n B 2 120 LEU 120 108 108 LEU LEU H . n B 2 121 ILE 121 109 109 ILE ILE H . n B 2 122 VAL 122 110 110 VAL VAL H . n B 2 123 VAL 123 111 111 VAL VAL H . n B 2 124 SER 124 112 112 SER SER H . n B 2 125 SER 125 113 113 SER SER H . n B 2 126 ALA 126 114 114 ALA ALA H . n B 2 127 SER 127 115 115 SER SER H . n B 2 128 THR 128 116 116 THR THR H . n B 2 129 LYS 129 117 117 LYS LYS H . n B 2 130 GLY 130 118 118 GLY GLY H . n B 2 131 PRO 131 119 119 PRO PRO H . n B 2 132 SER 132 120 120 SER SER H . n B 2 133 VAL 133 121 121 VAL VAL H . n B 2 134 PHE 134 122 122 PHE PHE H . n B 2 135 PRO 135 123 123 PRO PRO H . n B 2 136 LEU 136 124 124 LEU LEU H . n B 2 137 ALA 137 125 125 ALA ALA H . n B 2 138 PRO 138 126 126 PRO PRO H . n B 2 139 SER 139 127 127 SER SER H . n B 2 140 SER 140 128 ? ? ? H . n B 2 141 LYS 141 129 ? ? ? H . n B 2 142 SER 142 130 ? ? ? H . n B 2 143 THR 143 131 ? ? ? H . n B 2 144 SER 144 132 ? ? ? H . n B 2 145 GLY 145 133 133 GLY GLY H . n B 2 146 GLY 146 134 134 GLY GLY H . n B 2 147 THR 147 135 135 THR THR H . n B 2 148 ALA 148 136 136 ALA ALA H . n B 2 149 ALA 149 137 137 ALA ALA H . n B 2 150 LEU 150 138 138 LEU LEU H . n B 2 151 GLY 151 139 139 GLY GLY H . n B 2 152 CYS 152 140 140 CYS CYS H . n B 2 153 LEU 153 141 141 LEU LEU H . n B 2 154 VAL 154 142 142 VAL VAL H . n B 2 155 LYS 155 143 143 LYS LYS H . n B 2 156 ASP 156 144 144 ASP ASP H . n B 2 157 TYR 157 145 145 TYR TYR H . n B 2 158 PHE 158 146 146 PHE PHE H . n B 2 159 PRO 159 147 147 PRO PRO H . n B 2 160 GLU 160 148 148 GLU GLU H . n B 2 161 PRO 161 149 149 PRO PRO H . n B 2 162 VAL 162 150 150 VAL VAL H . n B 2 163 THR 163 151 151 THR THR H . n B 2 164 VAL 164 152 152 VAL VAL H . n B 2 165 SER 165 153 153 SER SER H . n B 2 166 TRP 166 154 154 TRP TRP H . n B 2 167 ASN 167 155 155 ASN ASN H . n B 2 168 SER 168 156 156 SER SER H . n B 2 169 GLY 169 157 157 GLY GLY H . n B 2 170 ALA 170 158 158 ALA ALA H . n B 2 171 LEU 171 159 159 LEU LEU H . n B 2 172 THR 172 160 160 THR THR H . n B 2 173 SER 173 161 161 SER SER H . n B 2 174 GLY 174 162 162 GLY GLY H . n B 2 175 VAL 175 163 163 VAL VAL H . n B 2 176 HIS 176 164 164 HIS HIS H . n B 2 177 THR 177 165 165 THR THR H . n B 2 178 PHE 178 166 166 PHE PHE H . n B 2 179 PRO 179 167 167 PRO PRO H . n B 2 180 ALA 180 168 168 ALA ALA H . n B 2 181 VAL 181 169 169 VAL VAL H . n B 2 182 LEU 182 170 170 LEU LEU H . n B 2 183 GLN 183 171 171 GLN GLN H . n B 2 184 SER 184 172 172 SER SER H . n B 2 185 SER 185 173 173 SER SER H . n B 2 186 GLY 186 174 174 GLY GLY H . n B 2 187 LEU 187 175 175 LEU LEU H . n B 2 188 TYR 188 176 176 TYR TYR H . n B 2 189 SER 189 177 177 SER SER H . n B 2 190 LEU 190 178 178 LEU LEU H . n B 2 191 SER 191 179 179 SER SER H . n B 2 192 SER 192 180 180 SER SER H . n B 2 193 VAL 193 181 181 VAL VAL H . n B 2 194 VAL 194 182 182 VAL VAL H . n B 2 195 THR 195 183 183 THR THR H . n B 2 196 VAL 196 184 184 VAL VAL H . n B 2 197 PRO 197 185 185 PRO PRO H . n B 2 198 SER 198 186 186 SER SER H . n B 2 199 SER 199 187 187 SER SER H . n B 2 200 SER 200 188 188 SER SER H . n B 2 201 LEU 201 189 189 LEU LEU H . n B 2 202 GLY 202 190 190 GLY GLY H . n B 2 203 THR 203 191 191 THR THR H . n B 2 204 GLN 204 192 192 GLN GLN H . n B 2 205 THR 205 193 193 THR THR H . n B 2 206 TYR 206 194 194 TYR TYR H . n B 2 207 ILE 207 195 195 ILE ILE H . n B 2 208 CYS 208 196 196 CYS CYS H . n B 2 209 ASN 209 197 197 ASN ASN H . n B 2 210 VAL 210 198 198 VAL VAL H . n B 2 211 ASN 211 199 199 ASN ASN H . n B 2 212 HIS 212 200 200 HIS HIS H . n B 2 213 LYS 213 201 201 LYS LYS H . n B 2 214 PRO 214 202 202 PRO PRO H . n B 2 215 SER 215 203 203 SER SER H . n B 2 216 ASN 216 204 204 ASN ASN H . n B 2 217 THR 217 205 205 THR THR H . n B 2 218 LYS 218 206 206 LYS LYS H . n B 2 219 VAL 219 207 207 VAL VAL H . n B 2 220 ASP 220 208 208 ASP ASP H . n B 2 221 LYS 221 209 209 LYS LYS H . n B 2 222 LYS 222 210 210 LYS LYS H . n B 2 223 VAL 223 211 211 VAL VAL H . n B 2 224 GLU 224 212 212 GLU GLU H . n B 2 225 PRO 225 213 213 PRO PRO H . n B 2 226 LYS 226 214 214 LYS LYS H . n B 2 227 SER 227 215 215 SER SER H . n B 2 228 CYS 228 216 ? ? ? H . n C 3 1 GLU 1 1 1 GLU GLU L . n C 3 2 ILE 2 2 2 ILE ILE L . n C 3 3 VAL 3 3 3 VAL VAL L . n C 3 4 LEU 4 4 4 LEU LEU L . n C 3 5 THR 5 5 5 THR THR L . n C 3 6 GLN 6 6 6 GLN GLN L . n C 3 7 SER 7 7 7 SER SER L . n C 3 8 PRO 8 8 8 PRO PRO L . n C 3 9 GLY 9 9 9 GLY GLY L . n C 3 10 THR 10 10 10 THR THR L . n C 3 11 LEU 11 11 11 LEU LEU L . n C 3 12 SER 12 12 12 SER SER L . n C 3 13 LEU 13 13 13 LEU LEU L . n C 3 14 SER 14 14 14 SER SER L . n C 3 15 PRO 15 15 15 PRO PRO L . n C 3 16 GLY 16 16 16 GLY GLY L . n C 3 17 GLU 17 17 17 GLU GLU L . n C 3 18 THR 18 18 18 THR THR L . n C 3 19 ALA 19 19 19 ALA ALA L . n C 3 20 SER 20 20 20 SER SER L . n C 3 21 LEU 21 21 21 LEU LEU L . n C 3 22 SER 22 22 22 SER SER L . n C 3 23 CYS 23 23 23 CYS CYS L . n C 3 24 THR 24 24 24 THR THR L . n C 3 25 ALA 25 25 25 ALA ALA L . n C 3 26 ALA 26 26 26 ALA ALA L . n C 3 27 SER 27 27 27 SER SER L . n C 3 28 TYR 28 30 30 TYR TYR L . n C 3 29 GLY 29 31 31 GLY GLY L . n C 3 30 HIS 30 32 32 HIS HIS L . n C 3 31 MET 31 33 33 MET MET L . n C 3 32 THR 32 34 34 THR THR L . n C 3 33 TRP 33 35 35 TRP TRP L . n C 3 34 TYR 34 36 36 TYR TYR L . n C 3 35 GLN 35 37 37 GLN GLN L . n C 3 36 LYS 36 38 38 LYS LYS L . n C 3 37 LYS 37 39 39 LYS LYS L . n C 3 38 PRO 38 40 40 PRO PRO L . n C 3 39 GLY 39 41 41 GLY GLY L . n C 3 40 GLN 40 42 42 GLN GLN L . n C 3 41 PRO 41 43 43 PRO PRO L . n C 3 42 PRO 42 44 44 PRO PRO L . n C 3 43 LYS 43 45 45 LYS LYS L . n C 3 44 LEU 44 46 46 LEU LEU L . n C 3 45 LEU 45 47 47 LEU LEU L . n C 3 46 ILE 46 48 48 ILE ILE L . n C 3 47 PHE 47 49 49 PHE PHE L . n C 3 48 ALA 48 50 50 ALA ALA L . n C 3 49 THR 49 51 51 THR THR L . n C 3 50 SER 50 52 52 SER SER L . n C 3 51 LYS 51 53 53 LYS LYS L . n C 3 52 ARG 52 54 54 ARG ARG L . n C 3 53 ALA 53 55 55 ALA ALA L . n C 3 54 SER 54 56 56 SER SER L . n C 3 55 GLY 55 57 57 GLY GLY L . n C 3 56 ILE 56 58 58 ILE ILE L . n C 3 57 PRO 57 59 59 PRO PRO L . n C 3 58 ASP 58 60 60 ASP ASP L . n C 3 59 ARG 59 61 61 ARG ARG L . n C 3 60 PHE 60 62 62 PHE PHE L . n C 3 61 SER 61 63 63 SER SER L . n C 3 62 GLY 62 64 64 GLY GLY L . n C 3 63 SER 63 65 65 SER SER L . n C 3 64 GLN 64 66 66 GLN GLN L . n C 3 65 PHE 65 67 67 PHE PHE L . n C 3 66 GLY 66 68 68 GLY GLY L . n C 3 67 LYS 67 69 69 LYS LYS L . n C 3 68 GLN 68 70 70 GLN GLN L . n C 3 69 TYR 69 71 71 TYR TYR L . n C 3 70 THR 70 72 72 THR THR L . n C 3 71 LEU 71 73 73 LEU LEU L . n C 3 72 THR 72 74 74 THR THR L . n C 3 73 ILE 73 75 75 ILE ILE L . n C 3 74 THR 74 76 76 THR THR L . n C 3 75 ARG 75 77 77 ARG ARG L . n C 3 76 MET 76 78 78 MET MET L . n C 3 77 GLU 77 79 79 GLU GLU L . n C 3 78 PRO 78 80 80 PRO PRO L . n C 3 79 GLU 79 81 81 GLU GLU L . n C 3 80 ASP 80 82 82 ASP ASP L . n C 3 81 PHE 81 83 83 PHE PHE L . n C 3 82 ALA 82 84 84 ALA ALA L . n C 3 83 ARG 83 85 85 ARG ARG L . n C 3 84 TYR 84 86 86 TYR TYR L . n C 3 85 TYR 85 87 87 TYR TYR L . n C 3 86 CYS 86 88 88 CYS CYS L . n C 3 87 GLN 87 89 89 GLN GLN L . n C 3 88 GLN 88 90 90 GLN GLN L . n C 3 89 LEU 89 91 91 LEU LEU L . n C 3 90 GLU 90 96 96 GLU GLU L . n C 3 91 PHE 91 97 97 PHE PHE L . n C 3 92 PHE 92 98 98 PHE PHE L . n C 3 93 GLY 93 99 99 GLY GLY L . n C 3 94 GLN 94 100 100 GLN GLN L . n C 3 95 GLY 95 101 101 GLY GLY L . n C 3 96 THR 96 102 102 THR THR L . n C 3 97 ARG 97 103 103 ARG ARG L . n C 3 98 LEU 98 104 104 LEU LEU L . n C 3 99 GLU 99 105 105 GLU GLU L . n C 3 100 ILE 100 106 106 ILE ILE L . n C 3 101 ARG 101 107 107 ARG ARG L . n C 3 102 ARG 102 108 108 ARG ARG L . n C 3 103 THR 103 109 109 THR THR L . n C 3 104 VAL 104 110 110 VAL VAL L . n C 3 105 ALA 105 111 111 ALA ALA L . n C 3 106 ALA 106 112 112 ALA ALA L . n C 3 107 PRO 107 113 113 PRO PRO L . n C 3 108 SER 108 114 114 SER SER L . n C 3 109 VAL 109 115 115 VAL VAL L . n C 3 110 PHE 110 116 116 PHE PHE L . n C 3 111 ILE 111 117 117 ILE ILE L . n C 3 112 PHE 112 118 118 PHE PHE L . n C 3 113 PRO 113 119 119 PRO PRO L . n C 3 114 PRO 114 120 120 PRO PRO L . n C 3 115 SER 115 121 121 SER SER L . n C 3 116 ASP 116 122 122 ASP ASP L . n C 3 117 GLU 117 123 123 GLU GLU L . n C 3 118 GLN 118 124 124 GLN GLN L . n C 3 119 LEU 119 125 125 LEU LEU L . n C 3 120 LYS 120 126 126 LYS LYS L . n C 3 121 SER 121 127 127 SER SER L . n C 3 122 GLY 122 128 128 GLY GLY L . n C 3 123 THR 123 129 129 THR THR L . n C 3 124 ALA 124 130 130 ALA ALA L . n C 3 125 SER 125 131 131 SER SER L . n C 3 126 VAL 126 132 132 VAL VAL L . n C 3 127 VAL 127 133 133 VAL VAL L . n C 3 128 CYS 128 134 134 CYS CYS L . n C 3 129 LEU 129 135 135 LEU LEU L . n C 3 130 LEU 130 136 136 LEU LEU L . n C 3 131 ASN 131 137 137 ASN ASN L . n C 3 132 ASN 132 138 138 ASN ASN L . n C 3 133 PHE 133 139 139 PHE PHE L . n C 3 134 TYR 134 140 140 TYR TYR L . n C 3 135 PRO 135 141 141 PRO PRO L . n C 3 136 ARG 136 142 142 ARG ARG L . n C 3 137 GLU 137 143 143 GLU GLU L . n C 3 138 ALA 138 144 144 ALA ALA L . n C 3 139 LYS 139 145 145 LYS LYS L . n C 3 140 VAL 140 146 146 VAL VAL L . n C 3 141 GLN 141 147 147 GLN GLN L . n C 3 142 TRP 142 148 148 TRP TRP L . n C 3 143 LYS 143 149 149 LYS LYS L . n C 3 144 VAL 144 150 150 VAL VAL L . n C 3 145 ASP 145 151 151 ASP ASP L . n C 3 146 ASN 146 152 152 ASN ASN L . n C 3 147 ALA 147 153 153 ALA ALA L . n C 3 148 LEU 148 154 154 LEU LEU L . n C 3 149 GLN 149 155 155 GLN GLN L . n C 3 150 SER 150 156 156 SER SER L . n C 3 151 GLY 151 157 157 GLY GLY L . n C 3 152 ASN 152 158 158 ASN ASN L . n C 3 153 SER 153 159 159 SER SER L . n C 3 154 GLN 154 160 160 GLN GLN L . n C 3 155 GLU 155 161 161 GLU GLU L . n C 3 156 SER 156 162 162 SER SER L . n C 3 157 VAL 157 163 163 VAL VAL L . n C 3 158 THR 158 164 164 THR THR L . n C 3 159 GLU 159 165 165 GLU GLU L . n C 3 160 GLN 160 166 166 GLN GLN L . n C 3 161 ASP 161 167 167 ASP ASP L . n C 3 162 SER 162 168 168 SER SER L . n C 3 163 LYS 163 169 169 LYS LYS L . n C 3 164 ASP 164 170 170 ASP ASP L . n C 3 165 SER 165 171 171 SER SER L . n C 3 166 THR 166 172 172 THR THR L . n C 3 167 TYR 167 173 173 TYR TYR L . n C 3 168 SER 168 174 174 SER SER L . n C 3 169 LEU 169 175 175 LEU LEU L . n C 3 170 SER 170 176 176 SER SER L . n C 3 171 SER 171 177 177 SER SER L . n C 3 172 THR 172 178 178 THR THR L . n C 3 173 LEU 173 179 179 LEU LEU L . n C 3 174 THR 174 180 180 THR THR L . n C 3 175 LEU 175 181 181 LEU LEU L . n C 3 176 SER 176 182 182 SER SER L . n C 3 177 LYS 177 183 183 LYS LYS L . n C 3 178 ALA 178 184 184 ALA ALA L . n C 3 179 ASP 179 185 185 ASP ASP L . n C 3 180 TYR 180 186 186 TYR TYR L . n C 3 181 GLU 181 187 187 GLU GLU L . n C 3 182 LYS 182 188 188 LYS LYS L . n C 3 183 HIS 183 189 189 HIS HIS L . n C 3 184 LYS 184 190 190 LYS LYS L . n C 3 185 VAL 185 191 191 VAL VAL L . n C 3 186 TYR 186 192 192 TYR TYR L . n C 3 187 ALA 187 193 193 ALA ALA L . n C 3 188 CYS 188 194 194 CYS CYS L . n C 3 189 GLU 189 195 195 GLU GLU L . n C 3 190 VAL 190 196 196 VAL VAL L . n C 3 191 THR 191 197 197 THR THR L . n C 3 192 HIS 192 198 198 HIS HIS L . n C 3 193 GLN 193 199 199 GLN GLN L . n C 3 194 GLY 194 200 200 GLY GLY L . n C 3 195 LEU 195 201 201 LEU LEU L . n C 3 196 SER 196 202 202 SER SER L . n C 3 197 SER 197 203 203 SER SER L . n C 3 198 PRO 198 204 204 PRO PRO L . n C 3 199 VAL 199 205 205 VAL VAL L . n C 3 200 THR 200 206 206 THR THR L . n C 3 201 LYS 201 207 207 LYS LYS L . n C 3 202 SER 202 208 208 SER SER L . n C 3 203 PHE 203 209 209 PHE PHE L . n C 3 204 ASN 204 210 210 ASN ASN L . n C 3 205 ARG 205 211 211 ARG ARG L . n C 3 206 GLY 206 212 212 GLY GLY L . n C 3 207 GLU 207 213 213 GLU GLU L . n C 3 208 CYS 208 214 214 CYS CYS L . n # _pdbx_nonpoly_scheme.asym_id D _pdbx_nonpoly_scheme.entity_id 4 _pdbx_nonpoly_scheme.mon_id CA _pdbx_nonpoly_scheme.ndb_seq_num 1 _pdbx_nonpoly_scheme.pdb_seq_num 301 _pdbx_nonpoly_scheme.auth_seq_num 1 _pdbx_nonpoly_scheme.pdb_mon_id CA _pdbx_nonpoly_scheme.auth_mon_id CA _pdbx_nonpoly_scheme.pdb_strand_id L _pdbx_nonpoly_scheme.pdb_ins_code . # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal XDS 'data scaling' . ? 1 PHASER phasing . ? 2 BUSTER refinement 2.10.0 ? 3 XDS 'data reduction' . ? 4 # _cell.entry_id 4I3S _cell.length_a 47.647 _cell.length_b 73.471 _cell.length_c 109.292 _cell.angle_alpha 90.00 _cell.angle_beta 100.94 _cell.angle_gamma 90.00 _cell.Z_PDB 2 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4I3S _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 4 _symmetry.space_group_name_Hall ? # _exptl.entry_id 4I3S _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.74 _exptl_crystal.density_percent_sol 55.15 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 293 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7.5 _exptl_crystal_grow.pdbx_details '52.5% peg 400, 100 mM HEPES pH7.5, 200 mM CaCl2, VAPOR DIFFUSION, HANGING DROP, temperature 293K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.details ? _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2012-06-26 # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si 111 CHANNEL' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 22-ID' _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 22-ID _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1 # _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.limit_k_max ? _reflns.d_resolution_high 2.85 _reflns.observed_criterion_F_min ? _reflns.pdbx_netI_over_sigmaI 6.21 _reflns.observed_criterion_F_max ? _reflns.pdbx_Rmerge_I_obs 0.225 _reflns.limit_l_max ? _reflns.limit_k_min ? _reflns.entry_id 4I3S _reflns.B_iso_Wilson_estimate 47.83 _reflns.percent_possible_obs 85.4 _reflns.pdbx_Rsym_value 0.225 _reflns.observed_criterion_sigma_I 2 _reflns.observed_criterion_sigma_F 2 _reflns.limit_l_min ? _reflns.limit_h_min ? _reflns.R_free_details ? _reflns.number_all ? _reflns.d_resolution_low 50.0 _reflns.pdbx_redundancy 2 _reflns.number_obs 14947 _reflns.limit_h_max ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 2.85 _reflns_shell.d_res_low 2.93 _reflns_shell.percent_possible_all 76.3 _reflns_shell.Rmerge_I_obs 0.90 _reflns_shell.pdbx_Rsym_value 0.90 _reflns_shell.meanI_over_sigI_obs 2.01 _reflns_shell.pdbx_redundancy 1.3 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.ls_percent_reflns_R_free 7.19 _refine.overall_SU_B ? _refine.pdbx_solvent_vdw_probe_radii ? _refine.pdbx_R_Free_selection_details RANDOM _refine.overall_FOM_free_R_set ? _refine.pdbx_data_cutoff_low_absF ? _refine.entry_id 4I3S _refine.aniso_B[2][3] 0.0000 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_ML ? _refine.aniso_B[1][3] 1.8997 _refine.pdbx_stereochemistry_target_values MLHL _refine.aniso_B[3][3] -0.8864 _refine.solvent_model_param_ksol ? _refine.ls_number_restraints ? _refine.aniso_B[1][1] 6.9102 _refine.pdbx_overall_ESU_R ? _refine.ls_R_factor_obs 0.2534 _refine.occupancy_min ? _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_starting_model 'PDB ENTRY 3SE9' _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.occupancy_max ? _refine.pdbx_solvent_shrinkage_radii ? _refine.correlation_coeff_Fo_to_Fc 0.8262 _refine.ls_number_reflns_R_free 1075 _refine.correlation_coeff_Fo_to_Fc_free 0.7166 _refine.pdbx_ls_sigma_F 0.0 _refine.ls_percent_reflns_obs 85.41 _refine.ls_R_factor_R_work 0.2483 _refine.overall_SU_R_free ? _refine.ls_d_res_high 2.85 _refine.pdbx_overall_ESU_R_Free ? _refine.B_iso_min ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.B_iso_mean 41.38 _refine.pdbx_stereochem_target_val_spec_case ? _refine.ls_R_factor_all ? _refine.aniso_B[2][2] -6.0238 _refine.B_iso_max ? _refine.pdbx_ls_sigma_I 0 _refine.ls_d_res_low 46.78 _refine.pdbx_overall_phase_error ? _refine.solvent_model_details ? _refine.aniso_B[1][2] 0.0000 _refine.ls_R_factor_R_free 0.3199 _refine.ls_R_factor_R_free_error ? _refine.ls_number_reflns_obs 14941 _refine.overall_FOM_work_R_set ? _refine.ls_number_parameters ? _refine.details ? _refine.ls_number_reflns_all 17504 _refine.ls_redundancy_reflns_obs ? _refine.pdbx_data_cutoff_high_absF ? _refine.solvent_model_param_bsol ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_analyze.entry_id 4I3S _refine_analyze.Luzzati_coordinate_error_obs 0.508 _refine_analyze.Luzzati_sigma_a_obs ? _refine_analyze.Luzzati_d_res_low_obs ? _refine_analyze.Luzzati_coordinate_error_free ? _refine_analyze.Luzzati_sigma_a_free ? _refine_analyze.Luzzati_d_res_low_free ? _refine_analyze.number_disordered_residues ? _refine_analyze.occupancy_sum_hydrogen ? _refine_analyze.occupancy_sum_non_hydrogen ? _refine_analyze.pdbx_Luzzati_d_res_high_obs ? _refine_analyze.pdbx_refine_id 'X-RAY DIFFRACTION' # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 4689 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 1 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 4690 _refine_hist.d_res_high 2.85 _refine_hist.d_res_low 46.78 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id t_bond_d 0.009 ? 2.00 4801 HARMONIC 'X-RAY DIFFRACTION' t_angle_deg 1.19 ? 2.00 6518 HARMONIC 'X-RAY DIFFRACTION' t_dihedral_angle_d ? ? 2.00 1629 SINUSOIDAL 'X-RAY DIFFRACTION' t_trig_c_planes ? ? 2.00 111 HARMONIC 'X-RAY DIFFRACTION' t_gen_planes ? ? 5.00 700 HARMONIC 'X-RAY DIFFRACTION' t_it ? ? 20.00 4801 HARMONIC 'X-RAY DIFFRACTION' t_omega_torsion 2.43 ? ? ? ? 'X-RAY DIFFRACTION' t_other_torsion 22.68 ? ? ? ? 'X-RAY DIFFRACTION' t_chiral_improper_torsion ? ? 5.00 639 SEMIHARMONIC 'X-RAY DIFFRACTION' t_ideal_dist_contact ? ? 4.00 4978 SEMIHARMONIC 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 8 _refine_ls_shell.d_res_high 2.85 _refine_ls_shell.d_res_low 3.05 _refine_ls_shell.number_reflns_R_work 2224 _refine_ls_shell.R_factor_R_work 0.2345 _refine_ls_shell.percent_reflns_obs 85.41 _refine_ls_shell.R_factor_R_free 0.3110 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free 7.49 _refine_ls_shell.number_reflns_R_free 180 _refine_ls_shell.number_reflns_all 2404 _refine_ls_shell.R_factor_all 0.2405 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _database_PDB_matrix.entry_id 4I3S _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _struct.entry_id 4I3S _struct.title 'Crystal structure of the outer domain of HIV-1 gp120 in complex with VRC-PG04 space group P21' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4I3S _struct_keywords.pdbx_keywords 'Viral Protein/Immune System' _struct_keywords.text ;Antibody Affinity, Antibody Specificity, Binding Sites, HIV Infections, Antibodies, HIV Envelope Protein gp120, AIDS Vaccines, Amino Acid Sequence, Antigens, Epitopes, HIV Antibodies, CD4, Somatic Mutation, Sequence engineering, Complementarity Determining Regions, Immunoglobulin Fab Fragments, Sera, Viral Protein-Immune System complex ; # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 4 ? # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_align_begin _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_db_isoform 1 PDB 4I3S 4I3S 1 ? ? ? 2 PDB 4I3S 4I3S 2 ? ? ? 3 PDB 4I3S 4I3S 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4I3S G 1 ? 190 ? 4I3S 252 ? 481 ? 252 481 2 2 4I3S H 1 ? 228 ? 4I3S 1 ? 216 ? 1 216 3 3 4I3S L 1 ? 208 ? 4I3S 1 ? 214 ? 1 214 # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_defined_assembly _pdbx_struct_assembly.method_details ? _pdbx_struct_assembly.oligomeric_details trimeric _pdbx_struct_assembly.oligomeric_count 3 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _struct_biol.id _struct_biol.details 1 'The Biological unit is identical to that found in the asymmetric unit.' 2 'The Biological unit is identical to that found in the asymmetric unit.' 3 'The Biological unit is identical to that found in the asymmetric unit.' # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASN A 58 ? ARG A 74 ? ASN G 334 ARG G 350 1 ? 17 HELX_P HELX_P2 2 ASP A 90 ? THR A 95 ? ASP G 368 THR G 373 1 ? 6 HELX_P HELX_P3 3 SER B 25 ? GLU B 30 ? SER H 25 GLU H 30 1 ? 6 HELX_P HELX_P4 4 SER B 63 ? GLN B 68 ? SER H 60 GLN H 65 1 ? 6 HELX_P HELX_P5 5 THR B 89 ? THR B 93 ? THR H 83 THR H 87 5 ? 5 HELX_P HELX_P6 6 SER B 168 ? ALA B 170 ? SER H 156 ALA H 158 5 ? 3 HELX_P HELX_P7 7 GLU C 77 ? PHE C 81 ? GLU L 79 PHE L 83 5 ? 5 HELX_P HELX_P8 8 SER C 115 ? LYS C 120 ? SER L 121 LYS L 126 1 ? 6 HELX_P HELX_P9 9 LYS C 177 ? LYS C 182 ? LYS L 183 LYS L 188 1 ? 6 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role disulf1 disulf ? ? A CYS 45 SG ? ? ? 1_555 A CYS 55 SG ? ? G CYS 296 G CYS 331 1_555 ? ? ? ? ? ? ? 2.900 ? ? disulf2 disulf ? ? A CYS 80 SG ? ? ? 1_555 A CYS 174 SG ? ? G CYS 358 G CYS 465 1_555 ? ? ? ? ? ? ? 2.463 ? ? disulf3 disulf ? ? A CYS 100 SG ? ? ? 1_555 A CYS 154 SG ? ? G CYS 378 G CYS 445 1_555 ? ? ? ? ? ? ? 2.502 ? ? disulf4 disulf none ? A CYS 107 SG ? ? ? 1_555 A CYS 138 SG ? ? G CYS 385 G CYS 418 1_555 ? ? ? ? ? ? ? 1.537 ? ? disulf5 disulf ? ? B CYS 22 SG ? ? ? 1_555 B CYS 98 SG ? ? H CYS 22 H CYS 92 1_555 ? ? ? ? ? ? ? 2.816 ? ? disulf6 disulf ? ? B CYS 152 SG ? ? ? 1_555 B CYS 208 SG ? ? H CYS 140 H CYS 196 1_555 ? ? ? ? ? ? ? 2.998 ? ? disulf7 disulf ? ? C CYS 128 SG ? ? ? 1_555 C CYS 188 SG ? ? L CYS 134 L CYS 194 1_555 ? ? ? ? ? ? ? 2.541 ? ? metalc1 metalc ? ? C GLU 137 OE1 ? ? ? 1_555 D CA . CA ? ? L GLU 143 L CA 301 1_555 ? ? ? ? ? ? ? 2.642 ? ? # loop_ _struct_conn_type.id _struct_conn_type.criteria _struct_conn_type.reference disulf ? ? metalc ? ? # loop_ _pdbx_modification_feature.ordinal _pdbx_modification_feature.label_comp_id _pdbx_modification_feature.label_asym_id _pdbx_modification_feature.label_seq_id _pdbx_modification_feature.label_alt_id _pdbx_modification_feature.modified_residue_label_comp_id _pdbx_modification_feature.modified_residue_label_asym_id _pdbx_modification_feature.modified_residue_label_seq_id _pdbx_modification_feature.modified_residue_label_alt_id _pdbx_modification_feature.auth_comp_id _pdbx_modification_feature.auth_asym_id _pdbx_modification_feature.auth_seq_id _pdbx_modification_feature.PDB_ins_code _pdbx_modification_feature.symmetry _pdbx_modification_feature.modified_residue_auth_comp_id _pdbx_modification_feature.modified_residue_auth_asym_id _pdbx_modification_feature.modified_residue_auth_seq_id _pdbx_modification_feature.modified_residue_PDB_ins_code _pdbx_modification_feature.modified_residue_symmetry _pdbx_modification_feature.comp_id_linking_atom _pdbx_modification_feature.modified_residue_id_linking_atom _pdbx_modification_feature.modified_residue_id _pdbx_modification_feature.ref_pcm_id _pdbx_modification_feature.ref_comp_id _pdbx_modification_feature.type _pdbx_modification_feature.category 1 CYS A 45 ? CYS A 55 ? CYS G 296 ? 1_555 CYS G 331 ? 1_555 SG SG . . . None 'Disulfide bridge' 2 CYS A 80 ? CYS A 174 ? CYS G 358 ? 1_555 CYS G 465 ? 1_555 SG SG . . . None 'Disulfide bridge' 3 CYS A 100 ? CYS A 154 ? CYS G 378 ? 1_555 CYS G 445 ? 1_555 SG SG . . . None 'Disulfide bridge' 4 CYS A 107 ? CYS A 138 ? CYS G 385 ? 1_555 CYS G 418 ? 1_555 SG SG . . . None 'Disulfide bridge' 5 CYS B 22 ? CYS B 98 ? CYS H 22 ? 1_555 CYS H 92 ? 1_555 SG SG . . . None 'Disulfide bridge' 6 CYS B 152 ? CYS B 208 ? CYS H 140 ? 1_555 CYS H 196 ? 1_555 SG SG . . . None 'Disulfide bridge' 7 CYS C 128 ? CYS C 188 ? CYS L 134 ? 1_555 CYS L 194 ? 1_555 SG SG . . . None 'Disulfide bridge' # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 50 A . ? ASN 301 G ASN 51 A ? ASN 302 G 1 0.55 2 GLY 144 A . ? GLY 433 G ALA 145 A ? ALA 436 G 1 2.68 3 GLY 150 A . ? GLY 441 G VAL 151 A ? VAL 442 G 1 1.23 4 GLY 181 A . ? GLY 472 G GLY 182 A ? GLY 473 G 1 0.35 5 GLN 1 B . ? GLN 1 H VAL 2 B ? VAL 2 H 1 -1.74 6 GLN 3 B . ? GLN 3 H LEU 4 B ? LEU 4 H 1 -1.62 7 PHE 158 B . ? PHE 146 H PRO 159 B ? PRO 147 H 1 -5.75 8 GLU 160 B . ? GLU 148 H PRO 161 B ? PRO 149 H 1 6.41 9 SER 7 C . ? SER 7 L PRO 8 C ? PRO 8 L 1 -2.57 10 TYR 134 C . ? TYR 140 L PRO 135 C ? PRO 141 L 1 -5.05 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 7 ? B ? 6 ? C ? 4 ? D ? 6 ? E ? 4 ? F ? 4 ? G ? 4 ? H ? 3 ? I ? 4 ? J ? 6 ? K ? 4 ? L ? 4 ? M ? 4 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel A 6 7 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel D 4 5 ? anti-parallel D 5 6 ? anti-parallel E 1 2 ? parallel E 2 3 ? anti-parallel E 3 4 ? anti-parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel F 3 4 ? anti-parallel G 1 2 ? anti-parallel G 2 3 ? anti-parallel G 3 4 ? anti-parallel H 1 2 ? anti-parallel H 2 3 ? anti-parallel I 1 2 ? anti-parallel I 2 3 ? anti-parallel I 3 4 ? anti-parallel J 1 2 ? parallel J 2 3 ? anti-parallel J 3 4 ? anti-parallel J 4 5 ? anti-parallel J 5 6 ? anti-parallel K 1 2 ? parallel K 2 3 ? anti-parallel K 3 4 ? anti-parallel L 1 2 ? anti-parallel L 2 3 ? anti-parallel L 3 4 ? anti-parallel M 1 2 ? anti-parallel M 2 3 ? anti-parallel M 3 4 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 LEU A 8 ? LEU A 10 ? LEU G 259 LEU G 261 A 2 ILE A 152 ? ARG A 165 ? ILE G 443 ARG G 456 A 3 ILE A 33 ? ARG A 47 ? ILE G 284 ARG G 298 A 4 TYR A 54 ? VAL A 57 ? TYR G 330 VAL G 333 A 5 ILE A 134 ? ILE A 140 ? ILE G 414 ILE G 420 A 6 GLU A 103 ? CYS A 107 ? GLU G 381 CYS G 385 A 7 HIS A 96 ? CYS A 100 ? HIS G 374 CYS G 378 B 1 ARG A 20 ? LYS A 22 ? ARG G 271 LYS G 273 B 2 ILE A 33 ? ARG A 47 ? ILE G 284 ARG G 298 B 3 ILE A 152 ? ARG A 165 ? ILE G 443 ARG G 456 B 4 GLU A 175 ? PRO A 179 ? GLU G 466 PRO G 470 B 5 ILE A 81 ? PHE A 83 ? ILE G 359 PHE G 361 B 6 SER A 115 ? TRP A 117 ? SER G 393 TRP G 395 C 1 VAL B 5 ? GLN B 6 ? VAL H 5 GLN H 6 C 2 VAL B 18 ? TRP B 23 ? VAL H 18 TRP H 23 C 3 THR B 80 ? ILE B 85 ? THR H 77 ILE H 82 C 4 VAL B 70 ? ASP B 75 ? VAL H 67 ASP H 72 D 1 GLY B 10 ? LYS B 12 ? GLY H 10 LYS H 12 D 2 THR B 119 ? VAL B 123 ? THR H 107 VAL H 111 D 3 ALA B 94 ? LYS B 102 ? ALA H 88 LYS H 96 D 4 THR B 32 ? GLN B 40 ? THR H 32 GLN H 39 D 5 GLU B 47 ? LYS B 53 ? GLU H 46 LYS H 52 D 6 VAL B 59 ? PHE B 61 ? VAL H 56 PHE H 58 E 1 GLY B 10 ? LYS B 12 ? GLY H 10 LYS H 12 E 2 THR B 119 ? VAL B 123 ? THR H 107 VAL H 111 E 3 ALA B 94 ? LYS B 102 ? ALA H 88 LYS H 96 E 4 PHE B 112 F TRP B 115 ? PHE H 100 TRP H 103 F 1 SER B 132 ? LEU B 136 ? SER H 120 LEU H 124 F 2 THR B 147 ? TYR B 157 ? THR H 135 TYR H 145 F 3 TYR B 188 ? PRO B 197 ? TYR H 176 PRO H 185 F 4 VAL B 175 ? THR B 177 ? VAL H 163 THR H 165 G 1 SER B 132 ? LEU B 136 ? SER H 120 LEU H 124 G 2 THR B 147 ? TYR B 157 ? THR H 135 TYR H 145 G 3 TYR B 188 ? PRO B 197 ? TYR H 176 PRO H 185 G 4 VAL B 181 ? LEU B 182 ? VAL H 169 LEU H 170 H 1 THR B 163 ? TRP B 166 ? THR H 151 TRP H 154 H 2 TYR B 206 ? HIS B 212 ? TYR H 194 HIS H 200 H 3 THR B 217 ? VAL B 223 ? THR H 205 VAL H 211 I 1 THR C 5 ? SER C 7 ? THR L 5 SER L 7 I 2 ALA C 19 ? THR C 24 ? ALA L 19 THR L 24 I 3 GLN C 68 ? ILE C 73 ? GLN L 70 ILE L 75 I 4 PHE C 60 ? PHE C 65 ? PHE L 62 PHE L 67 J 1 THR C 10 ? LEU C 13 ? THR L 10 LEU L 13 J 2 THR C 96 ? ILE C 100 ? THR L 102 ILE L 106 J 3 ARG C 83 ? GLN C 88 ? ARG L 85 GLN L 90 J 4 THR C 32 ? LYS C 36 ? THR L 34 LYS L 38 J 5 LYS C 43 ? PHE C 47 ? LYS L 45 PHE L 49 J 6 LYS C 51 ? ARG C 52 ? LYS L 53 ARG L 54 K 1 THR C 10 ? LEU C 13 ? THR L 10 LEU L 13 K 2 THR C 96 ? ILE C 100 ? THR L 102 ILE L 106 K 3 ARG C 83 ? GLN C 88 ? ARG L 85 GLN L 90 K 4 PHE C 91 ? PHE C 92 ? PHE L 97 PHE L 98 L 1 SER C 108 ? PHE C 112 ? SER L 114 PHE L 118 L 2 THR C 123 ? PHE C 133 ? THR L 129 PHE L 139 L 3 TYR C 167 ? SER C 176 ? TYR L 173 SER L 182 L 4 SER C 153 ? VAL C 157 ? SER L 159 VAL L 163 M 1 LEU C 148 ? GLN C 149 ? LEU L 154 GLN L 155 M 2 ALA C 138 ? VAL C 144 ? ALA L 144 VAL L 150 M 3 VAL C 185 ? HIS C 192 ? VAL L 191 HIS L 198 M 4 VAL C 199 ? ASN C 204 ? VAL L 205 ASN L 210 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N LEU A 9 ? N LEU G 260 O GLY A 160 ? O GLY G 451 A 2 3 O ILE A 158 ? O ILE G 449 N VAL A 41 ? N VAL G 292 A 3 4 N ASN A 44 ? N ASN G 295 O VAL A 56 ? O VAL G 332 A 4 5 N CYS A 55 ? N CYS G 331 O LEU A 136 ? O LEU G 416 A 5 6 O ARG A 139 ? O ARG G 419 N TYR A 106 ? N TYR G 384 A 6 7 O PHE A 105 ? O PHE G 383 N PHE A 98 ? N PHE G 376 B 1 2 N LYS A 22 ? N LYS G 273 O ILE A 34 ? O ILE G 285 B 2 3 N VAL A 41 ? N VAL G 292 O ILE A 158 ? O ILE G 449 B 3 4 N THR A 164 ? N THR G 455 O ARG A 178 ? O ARG G 469 B 4 5 O GLU A 175 ? O GLU G 466 N ILE A 82 ? N ILE G 360 B 5 6 N ILE A 81 ? N ILE G 359 O TRP A 117 ? O TRP G 395 C 1 2 N VAL B 5 ? N VAL H 5 O TRP B 23 ? O TRP H 23 C 2 3 N VAL B 20 ? N VAL H 20 O MET B 83 ? O MET H 80 C 3 4 O HIS B 82 ? O HIS H 79 N THR B 73 ? N THR H 70 D 1 2 N LYS B 12 ? N LYS H 12 O VAL B 122 ? O VAL H 110 D 2 3 O THR B 119 ? O THR H 107 N TYR B 96 ? N TYR H 90 D 3 4 O THR B 95 ? O THR H 89 N GLN B 40 ? N GLN H 39 D 4 5 N ARG B 39 ? N ARG H 38 O GLU B 47 ? O GLU H 46 D 5 6 N TRP B 51 ? N TRP H 50 O ASN B 60 ? O ASN H 57 E 1 2 N LYS B 12 ? N LYS H 12 O VAL B 122 ? O VAL H 110 E 2 3 O THR B 119 ? O THR H 107 N TYR B 96 ? N TYR H 90 E 3 4 N ARG B 100 ? N ARG H 94 O LEU B 114 ? O LEU H 102 F 1 2 N LEU B 136 ? N LEU H 124 O GLY B 151 ? O GLY H 139 F 2 3 N LEU B 150 ? N LEU H 138 O VAL B 194 ? O VAL H 182 F 3 4 O VAL B 193 ? O VAL H 181 N HIS B 176 ? N HIS H 164 G 1 2 N LEU B 136 ? N LEU H 124 O GLY B 151 ? O GLY H 139 G 2 3 N LEU B 150 ? N LEU H 138 O VAL B 194 ? O VAL H 182 G 3 4 O SER B 189 ? O SER H 177 N VAL B 181 ? N VAL H 169 H 1 2 N THR B 163 ? N THR H 151 O ASN B 211 ? O ASN H 199 H 2 3 N CYS B 208 ? N CYS H 196 O LYS B 221 ? O LYS H 209 I 1 2 N THR C 5 ? N THR L 5 O THR C 24 ? O THR L 24 I 2 3 N LEU C 21 ? N LEU L 21 O LEU C 71 ? O LEU L 73 I 3 4 O GLN C 68 ? O GLN L 70 N PHE C 65 ? N PHE L 67 J 1 2 N LEU C 11 ? N LEU L 11 O ARG C 97 ? O ARG L 103 J 2 3 O THR C 96 ? O THR L 102 N TYR C 84 ? N TYR L 86 J 3 4 O ARG C 83 ? O ARG L 85 N LYS C 36 ? N LYS L 38 J 4 5 N GLN C 35 ? N GLN L 37 O LYS C 43 ? O LYS L 45 J 5 6 N PHE C 47 ? N PHE L 49 O LYS C 51 ? O LYS L 53 K 1 2 N LEU C 11 ? N LEU L 11 O ARG C 97 ? O ARG L 103 K 2 3 O THR C 96 ? O THR L 102 N TYR C 84 ? N TYR L 86 K 3 4 N GLN C 88 ? N GLN L 90 O PHE C 91 ? O PHE L 97 L 1 2 N SER C 108 ? N SER L 114 O ASN C 131 ? O ASN L 137 L 2 3 N ALA C 124 ? N ALA L 130 O LEU C 175 ? O LEU L 181 L 3 4 O SER C 170 ? O SER L 176 N SER C 156 ? N SER L 162 M 1 2 O GLN C 149 ? O GLN L 155 N TRP C 142 ? N TRP L 148 M 2 3 N LYS C 143 ? N LYS L 149 O ALA C 187 ? O ALA L 193 M 3 4 N VAL C 190 ? N VAL L 196 O VAL C 199 ? O VAL L 205 # _struct_site.id AC1 _struct_site.pdbx_evidence_code Software _struct_site.pdbx_auth_asym_id L _struct_site.pdbx_auth_comp_id CA _struct_site.pdbx_auth_seq_id 301 _struct_site.pdbx_auth_ins_code ? _struct_site.pdbx_num_residues 2 _struct_site.details 'BINDING SITE FOR RESIDUE CA L 301' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 2 GLU C 99 ? GLU L 105 . ? 1_555 ? 2 AC1 2 GLU C 137 ? GLU L 143 . ? 1_555 ? # _pdbx_entry_details.entry_id 4I3S _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? _pdbx_entry_details.nonpolymer_details ? _pdbx_entry_details.sequence_details ? _pdbx_entry_details.has_ligand_of_interest ? _pdbx_entry_details.has_protein_modification Y # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PRO G 253 ? ? -85.77 -156.21 2 1 LYS G 268 ? ? -121.10 -60.12 3 1 ASP G 276 ? ? -165.69 107.22 4 1 ASN G 302 ? ? -118.79 51.15 5 1 ASN G 392 ? ? -176.03 46.83 6 1 GLU G 397 ? ? -75.79 -164.17 7 1 PRO G 437 ? ? -33.68 130.61 8 1 VAL G 442 ? ? -114.94 65.91 9 1 THR G 464 ? ? 56.49 -116.62 10 1 VAL H 2 ? ? -160.52 -158.47 11 1 VAL H 52 B ? -96.30 -76.36 12 1 PHE H 97 ? ? -56.81 107.02 13 1 THR H 116 ? ? -57.55 108.24 14 1 PRO H 147 ? ? -93.43 -158.04 15 1 LEU L 4 ? ? 92.97 11.17 16 1 SER L 7 ? ? -170.31 148.20 17 1 ALA L 26 ? ? -63.64 1.28 18 1 THR L 51 ? ? 74.12 -56.55 19 1 LEU L 91 ? ? 61.69 -123.28 20 1 ASN L 158 ? ? -151.02 -9.46 # _pdbx_refine_tls.pdbx_refine_id 'X-RAY DIFFRACTION' _pdbx_refine_tls.id 1 _pdbx_refine_tls.details ? _pdbx_refine_tls.method refined _pdbx_refine_tls.origin_x 7.0622 _pdbx_refine_tls.origin_y -16.8376 _pdbx_refine_tls.origin_z 23.6352 _pdbx_refine_tls.T[1][1] -0.1664 _pdbx_refine_tls.T[2][2] -0.3713 _pdbx_refine_tls.T[3][3] 0.0587 _pdbx_refine_tls.T[1][2] -0.0586 _pdbx_refine_tls.T[1][3] 0.1713 _pdbx_refine_tls.T[2][3] -0.0357 _pdbx_refine_tls.L[1][1] 1.6014 _pdbx_refine_tls.L[2][2] 0.9787 _pdbx_refine_tls.L[3][3] 0.9498 _pdbx_refine_tls.L[1][2] -0.6235 _pdbx_refine_tls.L[1][3] -1.0290 _pdbx_refine_tls.L[2][3] 0.3716 _pdbx_refine_tls.S[1][1] -0.0231 _pdbx_refine_tls.S[1][2] 0.1198 _pdbx_refine_tls.S[1][3] -0.1797 _pdbx_refine_tls.S[2][1] -0.0352 _pdbx_refine_tls.S[2][2] -0.0144 _pdbx_refine_tls.S[2][3] 0.1216 _pdbx_refine_tls.S[3][1] -0.0373 _pdbx_refine_tls.S[3][2] 0.0454 _pdbx_refine_tls.S[3][3] 0.0375 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 G 252 G 477 '{ *|* }' ? ? ? ? ? 'X-RAY DIFFRACTION' 2 1 H 1 H 215 '{ *|* }' ? ? ? ? ? 'X-RAY DIFFRACTION' 3 1 L 1 L 214 '{ *|* }' ? ? ? ? ? 'X-RAY DIFFRACTION' 4 1 L 301 L 301 '{ *|* }' ? ? ? ? ? # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 G GLY 407 ? A GLY 127 2 1 Y 1 G THR 408 ? A THR 128 3 1 Y 1 G GLU 409 ? A GLU 129 4 1 Y 1 G SER 410 ? A SER 130 5 1 Y 1 G ASN 411 ? A ASN 131 6 1 Y 1 G ASP 412 ? A ASP 132 7 1 Y 1 G ASN 478 ? A ASN 187 8 1 Y 1 G TRP 479 ? A TRP 188 9 1 Y 1 G ARG 480 ? A ARG 189 10 1 Y 1 G SER 481 ? A SER 190 11 1 Y 1 H SER 128 ? B SER 140 12 1 Y 1 H LYS 129 ? B LYS 141 13 1 Y 1 H SER 130 ? B SER 142 14 1 Y 1 H THR 131 ? B THR 143 15 1 Y 1 H SER 132 ? B SER 144 16 1 Y 1 H CYS 216 ? B CYS 228 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 CA CA CA N N 74 CYS N N N N 75 CYS CA C N R 76 CYS C C N N 77 CYS O O N N 78 CYS CB C N N 79 CYS SG S N N 80 CYS OXT O N N 81 CYS H H N N 82 CYS H2 H N N 83 CYS HA H N N 84 CYS HB2 H N N 85 CYS HB3 H N N 86 CYS HG H N N 87 CYS HXT H N N 88 GLN N N N N 89 GLN CA C N S 90 GLN C C N N 91 GLN O O N N 92 GLN CB C N N 93 GLN CG C N N 94 GLN CD C N N 95 GLN OE1 O N N 96 GLN NE2 N N N 97 GLN OXT O N N 98 GLN H H N N 99 GLN H2 H N N 100 GLN HA H N N 101 GLN HB2 H N N 102 GLN HB3 H N N 103 GLN HG2 H N N 104 GLN HG3 H N N 105 GLN HE21 H N N 106 GLN HE22 H N N 107 GLN HXT H N N 108 GLU N N N N 109 GLU CA C N S 110 GLU C C N N 111 GLU O O N N 112 GLU CB C N N 113 GLU CG C N N 114 GLU CD C N N 115 GLU OE1 O N N 116 GLU OE2 O N N 117 GLU OXT O N N 118 GLU H H N N 119 GLU H2 H N N 120 GLU HA H N N 121 GLU HB2 H N N 122 GLU HB3 H N N 123 GLU HG2 H N N 124 GLU HG3 H N N 125 GLU HE2 H N N 126 GLU HXT H N N 127 GLY N N N N 128 GLY CA C N N 129 GLY C C N N 130 GLY O O N N 131 GLY OXT O N N 132 GLY H H N N 133 GLY H2 H N N 134 GLY HA2 H N N 135 GLY HA3 H N N 136 GLY HXT H N N 137 HIS N N N N 138 HIS CA C N S 139 HIS C C N N 140 HIS O O N N 141 HIS CB C N N 142 HIS CG C Y N 143 HIS ND1 N Y N 144 HIS CD2 C Y N 145 HIS CE1 C Y N 146 HIS NE2 N Y N 147 HIS OXT O N N 148 HIS H H N N 149 HIS H2 H N N 150 HIS HA H N N 151 HIS HB2 H N N 152 HIS HB3 H N N 153 HIS HD1 H N N 154 HIS HD2 H N N 155 HIS HE1 H N N 156 HIS HE2 H N N 157 HIS HXT H N N 158 ILE N N N N 159 ILE CA C N S 160 ILE C C N N 161 ILE O O N N 162 ILE CB C N S 163 ILE CG1 C N N 164 ILE CG2 C N N 165 ILE CD1 C N N 166 ILE OXT O N N 167 ILE H H N N 168 ILE H2 H N N 169 ILE HA H N N 170 ILE HB H N N 171 ILE HG12 H N N 172 ILE HG13 H N N 173 ILE HG21 H N N 174 ILE HG22 H N N 175 ILE HG23 H N N 176 ILE HD11 H N N 177 ILE HD12 H N N 178 ILE HD13 H N N 179 ILE HXT H N N 180 LEU N N N N 181 LEU CA C N S 182 LEU C C N N 183 LEU O O N N 184 LEU CB C N N 185 LEU CG C N N 186 LEU CD1 C N N 187 LEU CD2 C N N 188 LEU OXT O N N 189 LEU H H N N 190 LEU H2 H N N 191 LEU HA H N N 192 LEU HB2 H N N 193 LEU HB3 H N N 194 LEU HG H N N 195 LEU HD11 H N N 196 LEU HD12 H N N 197 LEU HD13 H N N 198 LEU HD21 H N N 199 LEU HD22 H N N 200 LEU HD23 H N N 201 LEU HXT H N N 202 LYS N N N N 203 LYS CA C N S 204 LYS C C N N 205 LYS O O N N 206 LYS CB C N N 207 LYS CG C N N 208 LYS CD C N N 209 LYS CE C N N 210 LYS NZ N N N 211 LYS OXT O N N 212 LYS H H N N 213 LYS H2 H N N 214 LYS HA H N N 215 LYS HB2 H N N 216 LYS HB3 H N N 217 LYS HG2 H N N 218 LYS HG3 H N N 219 LYS HD2 H N N 220 LYS HD3 H N N 221 LYS HE2 H N N 222 LYS HE3 H N N 223 LYS HZ1 H N N 224 LYS HZ2 H N N 225 LYS HZ3 H N N 226 LYS HXT H N N 227 MET N N N N 228 MET CA C N S 229 MET C C N N 230 MET O O N N 231 MET CB C N N 232 MET CG C N N 233 MET SD S N N 234 MET CE C N N 235 MET OXT O N N 236 MET H H N N 237 MET H2 H N N 238 MET HA H N N 239 MET HB2 H N N 240 MET HB3 H N N 241 MET HG2 H N N 242 MET HG3 H N N 243 MET HE1 H N N 244 MET HE2 H N N 245 MET HE3 H N N 246 MET HXT H N N 247 PHE N N N N 248 PHE CA C N S 249 PHE C C N N 250 PHE O O N N 251 PHE CB C N N 252 PHE CG C Y N 253 PHE CD1 C Y N 254 PHE CD2 C Y N 255 PHE CE1 C Y N 256 PHE CE2 C Y N 257 PHE CZ C Y N 258 PHE OXT O N N 259 PHE H H N N 260 PHE H2 H N N 261 PHE HA H N N 262 PHE HB2 H N N 263 PHE HB3 H N N 264 PHE HD1 H N N 265 PHE HD2 H N N 266 PHE HE1 H N N 267 PHE HE2 H N N 268 PHE HZ H N N 269 PHE HXT H N N 270 PRO N N N N 271 PRO CA C N S 272 PRO C C N N 273 PRO O O N N 274 PRO CB C N N 275 PRO CG C N N 276 PRO CD C N N 277 PRO OXT O N N 278 PRO H H N N 279 PRO HA H N N 280 PRO HB2 H N N 281 PRO HB3 H N N 282 PRO HG2 H N N 283 PRO HG3 H N N 284 PRO HD2 H N N 285 PRO HD3 H N N 286 PRO HXT H N N 287 SER N N N N 288 SER CA C N S 289 SER C C N N 290 SER O O N N 291 SER CB C N N 292 SER OG O N N 293 SER OXT O N N 294 SER H H N N 295 SER H2 H N N 296 SER HA H N N 297 SER HB2 H N N 298 SER HB3 H N N 299 SER HG H N N 300 SER HXT H N N 301 THR N N N N 302 THR CA C N S 303 THR C C N N 304 THR O O N N 305 THR CB C N R 306 THR OG1 O N N 307 THR CG2 C N N 308 THR OXT O N N 309 THR H H N N 310 THR H2 H N N 311 THR HA H N N 312 THR HB H N N 313 THR HG1 H N N 314 THR HG21 H N N 315 THR HG22 H N N 316 THR HG23 H N N 317 THR HXT H N N 318 TRP N N N N 319 TRP CA C N S 320 TRP C C N N 321 TRP O O N N 322 TRP CB C N N 323 TRP CG C Y N 324 TRP CD1 C Y N 325 TRP CD2 C Y N 326 TRP NE1 N Y N 327 TRP CE2 C Y N 328 TRP CE3 C Y N 329 TRP CZ2 C Y N 330 TRP CZ3 C Y N 331 TRP CH2 C Y N 332 TRP OXT O N N 333 TRP H H N N 334 TRP H2 H N N 335 TRP HA H N N 336 TRP HB2 H N N 337 TRP HB3 H N N 338 TRP HD1 H N N 339 TRP HE1 H N N 340 TRP HE3 H N N 341 TRP HZ2 H N N 342 TRP HZ3 H N N 343 TRP HH2 H N N 344 TRP HXT H N N 345 TYR N N N N 346 TYR CA C N S 347 TYR C C N N 348 TYR O O N N 349 TYR CB C N N 350 TYR CG C Y N 351 TYR CD1 C Y N 352 TYR CD2 C Y N 353 TYR CE1 C Y N 354 TYR CE2 C Y N 355 TYR CZ C Y N 356 TYR OH O N N 357 TYR OXT O N N 358 TYR H H N N 359 TYR H2 H N N 360 TYR HA H N N 361 TYR HB2 H N N 362 TYR HB3 H N N 363 TYR HD1 H N N 364 TYR HD2 H N N 365 TYR HE1 H N N 366 TYR HE2 H N N 367 TYR HH H N N 368 TYR HXT H N N 369 VAL N N N N 370 VAL CA C N S 371 VAL C C N N 372 VAL O O N N 373 VAL CB C N N 374 VAL CG1 C N N 375 VAL CG2 C N N 376 VAL OXT O N N 377 VAL H H N N 378 VAL H2 H N N 379 VAL HA H N N 380 VAL HB H N N 381 VAL HG11 H N N 382 VAL HG12 H N N 383 VAL HG13 H N N 384 VAL HG21 H N N 385 VAL HG22 H N N 386 VAL HG23 H N N 387 VAL HXT H N N 388 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 CYS N CA sing N N 70 CYS N H sing N N 71 CYS N H2 sing N N 72 CYS CA C sing N N 73 CYS CA CB sing N N 74 CYS CA HA sing N N 75 CYS C O doub N N 76 CYS C OXT sing N N 77 CYS CB SG sing N N 78 CYS CB HB2 sing N N 79 CYS CB HB3 sing N N 80 CYS SG HG sing N N 81 CYS OXT HXT sing N N 82 GLN N CA sing N N 83 GLN N H sing N N 84 GLN N H2 sing N N 85 GLN CA C sing N N 86 GLN CA CB sing N N 87 GLN CA HA sing N N 88 GLN C O doub N N 89 GLN C OXT sing N N 90 GLN CB CG sing N N 91 GLN CB HB2 sing N N 92 GLN CB HB3 sing N N 93 GLN CG CD sing N N 94 GLN CG HG2 sing N N 95 GLN CG HG3 sing N N 96 GLN CD OE1 doub N N 97 GLN CD NE2 sing N N 98 GLN NE2 HE21 sing N N 99 GLN NE2 HE22 sing N N 100 GLN OXT HXT sing N N 101 GLU N CA sing N N 102 GLU N H sing N N 103 GLU N H2 sing N N 104 GLU CA C sing N N 105 GLU CA CB sing N N 106 GLU CA HA sing N N 107 GLU C O doub N N 108 GLU C OXT sing N N 109 GLU CB CG sing N N 110 GLU CB HB2 sing N N 111 GLU CB HB3 sing N N 112 GLU CG CD sing N N 113 GLU CG HG2 sing N N 114 GLU CG HG3 sing N N 115 GLU CD OE1 doub N N 116 GLU CD OE2 sing N N 117 GLU OE2 HE2 sing N N 118 GLU OXT HXT sing N N 119 GLY N CA sing N N 120 GLY N H sing N N 121 GLY N H2 sing N N 122 GLY CA C sing N N 123 GLY CA HA2 sing N N 124 GLY CA HA3 sing N N 125 GLY C O doub N N 126 GLY C OXT sing N N 127 GLY OXT HXT sing N N 128 HIS N CA sing N N 129 HIS N H sing N N 130 HIS N H2 sing N N 131 HIS CA C sing N N 132 HIS CA CB sing N N 133 HIS CA HA sing N N 134 HIS C O doub N N 135 HIS C OXT sing N N 136 HIS CB CG sing N N 137 HIS CB HB2 sing N N 138 HIS CB HB3 sing N N 139 HIS CG ND1 sing Y N 140 HIS CG CD2 doub Y N 141 HIS ND1 CE1 doub Y N 142 HIS ND1 HD1 sing N N 143 HIS CD2 NE2 sing Y N 144 HIS CD2 HD2 sing N N 145 HIS CE1 NE2 sing Y N 146 HIS CE1 HE1 sing N N 147 HIS NE2 HE2 sing N N 148 HIS OXT HXT sing N N 149 ILE N CA sing N N 150 ILE N H sing N N 151 ILE N H2 sing N N 152 ILE CA C sing N N 153 ILE CA CB sing N N 154 ILE CA HA sing N N 155 ILE C O doub N N 156 ILE C OXT sing N N 157 ILE CB CG1 sing N N 158 ILE CB CG2 sing N N 159 ILE CB HB sing N N 160 ILE CG1 CD1 sing N N 161 ILE CG1 HG12 sing N N 162 ILE CG1 HG13 sing N N 163 ILE CG2 HG21 sing N N 164 ILE CG2 HG22 sing N N 165 ILE CG2 HG23 sing N N 166 ILE CD1 HD11 sing N N 167 ILE CD1 HD12 sing N N 168 ILE CD1 HD13 sing N N 169 ILE OXT HXT sing N N 170 LEU N CA sing N N 171 LEU N H sing N N 172 LEU N H2 sing N N 173 LEU CA C sing N N 174 LEU CA CB sing N N 175 LEU CA HA sing N N 176 LEU C O doub N N 177 LEU C OXT sing N N 178 LEU CB CG sing N N 179 LEU CB HB2 sing N N 180 LEU CB HB3 sing N N 181 LEU CG CD1 sing N N 182 LEU CG CD2 sing N N 183 LEU CG HG sing N N 184 LEU CD1 HD11 sing N N 185 LEU CD1 HD12 sing N N 186 LEU CD1 HD13 sing N N 187 LEU CD2 HD21 sing N N 188 LEU CD2 HD22 sing N N 189 LEU CD2 HD23 sing N N 190 LEU OXT HXT sing N N 191 LYS N CA sing N N 192 LYS N H sing N N 193 LYS N H2 sing N N 194 LYS CA C sing N N 195 LYS CA CB sing N N 196 LYS CA HA sing N N 197 LYS C O doub N N 198 LYS C OXT sing N N 199 LYS CB CG sing N N 200 LYS CB HB2 sing N N 201 LYS CB HB3 sing N N 202 LYS CG CD sing N N 203 LYS CG HG2 sing N N 204 LYS CG HG3 sing N N 205 LYS CD CE sing N N 206 LYS CD HD2 sing N N 207 LYS CD HD3 sing N N 208 LYS CE NZ sing N N 209 LYS CE HE2 sing N N 210 LYS CE HE3 sing N N 211 LYS NZ HZ1 sing N N 212 LYS NZ HZ2 sing N N 213 LYS NZ HZ3 sing N N 214 LYS OXT HXT sing N N 215 MET N CA sing N N 216 MET N H sing N N 217 MET N H2 sing N N 218 MET CA C sing N N 219 MET CA CB sing N N 220 MET CA HA sing N N 221 MET C O doub N N 222 MET C OXT sing N N 223 MET CB CG sing N N 224 MET CB HB2 sing N N 225 MET CB HB3 sing N N 226 MET CG SD sing N N 227 MET CG HG2 sing N N 228 MET CG HG3 sing N N 229 MET SD CE sing N N 230 MET CE HE1 sing N N 231 MET CE HE2 sing N N 232 MET CE HE3 sing N N 233 MET OXT HXT sing N N 234 PHE N CA sing N N 235 PHE N H sing N N 236 PHE N H2 sing N N 237 PHE CA C sing N N 238 PHE CA CB sing N N 239 PHE CA HA sing N N 240 PHE C O doub N N 241 PHE C OXT sing N N 242 PHE CB CG sing N N 243 PHE CB HB2 sing N N 244 PHE CB HB3 sing N N 245 PHE CG CD1 doub Y N 246 PHE CG CD2 sing Y N 247 PHE CD1 CE1 sing Y N 248 PHE CD1 HD1 sing N N 249 PHE CD2 CE2 doub Y N 250 PHE CD2 HD2 sing N N 251 PHE CE1 CZ doub Y N 252 PHE CE1 HE1 sing N N 253 PHE CE2 CZ sing Y N 254 PHE CE2 HE2 sing N N 255 PHE CZ HZ sing N N 256 PHE OXT HXT sing N N 257 PRO N CA sing N N 258 PRO N CD sing N N 259 PRO N H sing N N 260 PRO CA C sing N N 261 PRO CA CB sing N N 262 PRO CA HA sing N N 263 PRO C O doub N N 264 PRO C OXT sing N N 265 PRO CB CG sing N N 266 PRO CB HB2 sing N N 267 PRO CB HB3 sing N N 268 PRO CG CD sing N N 269 PRO CG HG2 sing N N 270 PRO CG HG3 sing N N 271 PRO CD HD2 sing N N 272 PRO CD HD3 sing N N 273 PRO OXT HXT sing N N 274 SER N CA sing N N 275 SER N H sing N N 276 SER N H2 sing N N 277 SER CA C sing N N 278 SER CA CB sing N N 279 SER CA HA sing N N 280 SER C O doub N N 281 SER C OXT sing N N 282 SER CB OG sing N N 283 SER CB HB2 sing N N 284 SER CB HB3 sing N N 285 SER OG HG sing N N 286 SER OXT HXT sing N N 287 THR N CA sing N N 288 THR N H sing N N 289 THR N H2 sing N N 290 THR CA C sing N N 291 THR CA CB sing N N 292 THR CA HA sing N N 293 THR C O doub N N 294 THR C OXT sing N N 295 THR CB OG1 sing N N 296 THR CB CG2 sing N N 297 THR CB HB sing N N 298 THR OG1 HG1 sing N N 299 THR CG2 HG21 sing N N 300 THR CG2 HG22 sing N N 301 THR CG2 HG23 sing N N 302 THR OXT HXT sing N N 303 TRP N CA sing N N 304 TRP N H sing N N 305 TRP N H2 sing N N 306 TRP CA C sing N N 307 TRP CA CB sing N N 308 TRP CA HA sing N N 309 TRP C O doub N N 310 TRP C OXT sing N N 311 TRP CB CG sing N N 312 TRP CB HB2 sing N N 313 TRP CB HB3 sing N N 314 TRP CG CD1 doub Y N 315 TRP CG CD2 sing Y N 316 TRP CD1 NE1 sing Y N 317 TRP CD1 HD1 sing N N 318 TRP CD2 CE2 doub Y N 319 TRP CD2 CE3 sing Y N 320 TRP NE1 CE2 sing Y N 321 TRP NE1 HE1 sing N N 322 TRP CE2 CZ2 sing Y N 323 TRP CE3 CZ3 doub Y N 324 TRP CE3 HE3 sing N N 325 TRP CZ2 CH2 doub Y N 326 TRP CZ2 HZ2 sing N N 327 TRP CZ3 CH2 sing Y N 328 TRP CZ3 HZ3 sing N N 329 TRP CH2 HH2 sing N N 330 TRP OXT HXT sing N N 331 TYR N CA sing N N 332 TYR N H sing N N 333 TYR N H2 sing N N 334 TYR CA C sing N N 335 TYR CA CB sing N N 336 TYR CA HA sing N N 337 TYR C O doub N N 338 TYR C OXT sing N N 339 TYR CB CG sing N N 340 TYR CB HB2 sing N N 341 TYR CB HB3 sing N N 342 TYR CG CD1 doub Y N 343 TYR CG CD2 sing Y N 344 TYR CD1 CE1 sing Y N 345 TYR CD1 HD1 sing N N 346 TYR CD2 CE2 doub Y N 347 TYR CD2 HD2 sing N N 348 TYR CE1 CZ doub Y N 349 TYR CE1 HE1 sing N N 350 TYR CE2 CZ sing Y N 351 TYR CE2 HE2 sing N N 352 TYR CZ OH sing N N 353 TYR OH HH sing N N 354 TYR OXT HXT sing N N 355 VAL N CA sing N N 356 VAL N H sing N N 357 VAL N H2 sing N N 358 VAL CA C sing N N 359 VAL CA CB sing N N 360 VAL CA HA sing N N 361 VAL C O doub N N 362 VAL C OXT sing N N 363 VAL CB CG1 sing N N 364 VAL CB CG2 sing N N 365 VAL CB HB sing N N 366 VAL CG1 HG11 sing N N 367 VAL CG1 HG12 sing N N 368 VAL CG1 HG13 sing N N 369 VAL CG2 HG21 sing N N 370 VAL CG2 HG22 sing N N 371 VAL CG2 HG23 sing N N 372 VAL OXT HXT sing N N 373 # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3SE9 _pdbx_initial_refinement_model.details 'PDB ENTRY 3SE9' # _atom_sites.entry_id 4I3S _atom_sites.fract_transf_matrix[1][1] 0.020988 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.004057 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.013611 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.009319 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C CA N O S # loop_