data_4I6X # _entry.id 4I6X # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.279 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4I6X RCSB RCSB076380 WWPDB D_1000076380 # _pdbx_database_status.status_code REL _pdbx_database_status.entry_id 4I6X _pdbx_database_status.recvd_initial_deposition_date 2012-11-30 _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Kozlov, G.' 1 'Vinaik, R.' 2 'Gehring, K.' 3 # _citation.id primary _citation.title ;Structure of the Non-Catalytic Domain of the Protein Disulfide Isomerase-Related Protein (PDIR) Reveals Function in Protein Binding. ; _citation.journal_abbrev 'Plos One' _citation.journal_volume 8 _citation.page_first e62021 _citation.page_last e62021 _citation.year 2013 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1932-6203 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 23614004 _citation.pdbx_database_id_DOI 10.1371/journal.pone.0062021 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Vinaik, R.' 1 primary 'Kozlov, G.' 2 primary 'Gehring, K.' 3 # _cell.entry_id 4I6X _cell.length_a 34.686 _cell.length_b 41.265 _cell.length_c 90.893 _cell.angle_alpha 90.00 _cell.angle_beta 90.00 _cell.angle_gamma 90.00 _cell.Z_PDB 4 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4I6X _symmetry.space_group_name_H-M 'P 21 21 21' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 19 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Protein disulfide-isomerase A5' 15024.337 1 5.3.4.1 ? 'non-catalytic domain (UNP residues 29-150)' ? 2 water nat water 18.015 125 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'PDIr, Protein disulfide isomerase-related protein' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;MLIERISDPKDLKKLLRTRNNVLVLYSKSEVAAENHLRLLSTVAQAVKGQGTICWVDCGDAESRKLCKKMKVDLSPKDKK VELFHYQDGAFHTEYNRAVTFKSIVAFLKDPKGPPLWEEDPGALEHHHHHH ; _entity_poly.pdbx_seq_one_letter_code_can ;MLIERISDPKDLKKLLRTRNNVLVLYSKSEVAAENHLRLLSTVAQAVKGQGTICWVDCGDAESRKLCKKMKVDLSPKDKK VELFHYQDGAFHTEYNRAVTFKSIVAFLKDPKGPPLWEEDPGALEHHHHHH ; _entity_poly.pdbx_strand_id A _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 MET n 1 2 LEU n 1 3 ILE n 1 4 GLU n 1 5 ARG n 1 6 ILE n 1 7 SER n 1 8 ASP n 1 9 PRO n 1 10 LYS n 1 11 ASP n 1 12 LEU n 1 13 LYS n 1 14 LYS n 1 15 LEU n 1 16 LEU n 1 17 ARG n 1 18 THR n 1 19 ARG n 1 20 ASN n 1 21 ASN n 1 22 VAL n 1 23 LEU n 1 24 VAL n 1 25 LEU n 1 26 TYR n 1 27 SER n 1 28 LYS n 1 29 SER n 1 30 GLU n 1 31 VAL n 1 32 ALA n 1 33 ALA n 1 34 GLU n 1 35 ASN n 1 36 HIS n 1 37 LEU n 1 38 ARG n 1 39 LEU n 1 40 LEU n 1 41 SER n 1 42 THR n 1 43 VAL n 1 44 ALA n 1 45 GLN n 1 46 ALA n 1 47 VAL n 1 48 LYS n 1 49 GLY n 1 50 GLN n 1 51 GLY n 1 52 THR n 1 53 ILE n 1 54 CYS n 1 55 TRP n 1 56 VAL n 1 57 ASP n 1 58 CYS n 1 59 GLY n 1 60 ASP n 1 61 ALA n 1 62 GLU n 1 63 SER n 1 64 ARG n 1 65 LYS n 1 66 LEU n 1 67 CYS n 1 68 LYS n 1 69 LYS n 1 70 MET n 1 71 LYS n 1 72 VAL n 1 73 ASP n 1 74 LEU n 1 75 SER n 1 76 PRO n 1 77 LYS n 1 78 ASP n 1 79 LYS n 1 80 LYS n 1 81 VAL n 1 82 GLU n 1 83 LEU n 1 84 PHE n 1 85 HIS n 1 86 TYR n 1 87 GLN n 1 88 ASP n 1 89 GLY n 1 90 ALA n 1 91 PHE n 1 92 HIS n 1 93 THR n 1 94 GLU n 1 95 TYR n 1 96 ASN n 1 97 ARG n 1 98 ALA n 1 99 VAL n 1 100 THR n 1 101 PHE n 1 102 LYS n 1 103 SER n 1 104 ILE n 1 105 VAL n 1 106 ALA n 1 107 PHE n 1 108 LEU n 1 109 LYS n 1 110 ASP n 1 111 PRO n 1 112 LYS n 1 113 GLY n 1 114 PRO n 1 115 PRO n 1 116 LEU n 1 117 TRP n 1 118 GLU n 1 119 GLU n 1 120 ASP n 1 121 PRO n 1 122 GLY n 1 123 ALA n 1 124 LEU n 1 125 GLU n 1 126 HIS n 1 127 HIS n 1 128 HIS n 1 129 HIS n 1 130 HIS n 1 131 HIS n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name human _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene 'PDIA5, PDIR' _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Homo sapiens' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 9606 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 511693 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain BL21 _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET29a _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code PDIA5_HUMAN _struct_ref.pdbx_db_accession Q14554 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;LIERISDPKDLKKLLRTRNNVLVLYSKSEVAAENHLRLLSTVAQAVKGQGTICWVDCGDAESRKLCKKMKVDLSPKDKKV ELFHYQDGAFHTEYNRAVTFKSIVAFLKDPKGPPLWEEDPGA ; _struct_ref.pdbx_align_begin 29 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4I6X _struct_ref_seq.pdbx_strand_id A _struct_ref_seq.seq_align_beg 2 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 123 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q14554 _struct_ref_seq.db_align_beg 29 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 150 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 29 _struct_ref_seq.pdbx_auth_seq_align_end 150 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4I6X MET A 1 ? UNP Q14554 ? ? 'INITIATING METHIONINE' 28 1 1 4I6X LEU A 124 ? UNP Q14554 ? ? 'EXPRESSION TAG' 151 2 1 4I6X GLU A 125 ? UNP Q14554 ? ? 'EXPRESSION TAG' 152 3 1 4I6X HIS A 126 ? UNP Q14554 ? ? 'EXPRESSION TAG' 153 4 1 4I6X HIS A 127 ? UNP Q14554 ? ? 'EXPRESSION TAG' 154 5 1 4I6X HIS A 128 ? UNP Q14554 ? ? 'EXPRESSION TAG' 155 6 1 4I6X HIS A 129 ? UNP Q14554 ? ? 'EXPRESSION TAG' 156 7 1 4I6X HIS A 130 ? UNP Q14554 ? ? 'EXPRESSION TAG' 157 8 1 4I6X HIS A 131 ? UNP Q14554 ? ? 'EXPRESSION TAG' 158 9 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CYS 'L-peptide linking' y CYSTEINE ? 'C3 H7 N O2 S' 121.158 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4I6X _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.16 _exptl_crystal.density_percent_sol 43.18 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 294 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 7 _exptl_crystal_grow.pdbx_details '0.15 M DL-malic acid, 20% PEG3350, pH 7, VAPOR DIFFUSION, HANGING DROP, temperature 294K' _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 210' _diffrn_detector.pdbx_collection_date 2010-10-21 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111)' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.9770 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'CHESS BEAMLINE A1' _diffrn_source.pdbx_synchrotron_site CHESS _diffrn_source.pdbx_synchrotron_beamline A1 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.9770 # _reflns.entry_id 4I6X _reflns.observed_criterion_sigma_I 1 _reflns.observed_criterion_sigma_F 1 _reflns.d_resolution_low 50 _reflns.d_resolution_high 1.50 _reflns.number_obs 19332 _reflns.number_all 20332 _reflns.percent_possible_obs 95.08 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value 0.031 _reflns.pdbx_netI_over_sigmaI 43.5 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 5.7 _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _reflns_shell.d_res_high 1.50 _reflns_shell.d_res_low 1.53 _reflns_shell.percent_possible_all 67.01 _reflns_shell.Rmerge_I_obs ? _reflns_shell.pdbx_Rsym_value 0.268 _reflns_shell.meanI_over_sigI_obs 3.6 _reflns_shell.pdbx_redundancy 4.1 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all 972 _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? _reflns_shell.pdbx_ordinal 1 _reflns_shell.pdbx_diffrn_id 1 # _refine.entry_id 4I6X _refine.ls_number_reflns_obs 19332 _refine.ls_number_reflns_all 20332 _refine.pdbx_ls_sigma_I 1 _refine.pdbx_ls_sigma_F 1 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 45.45 _refine.ls_d_res_high 1.50 _refine.ls_percent_reflns_obs 95.08 _refine.ls_R_factor_obs 0.19330 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.19117 _refine.ls_R_factor_R_free 0.23681 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 5.2 _refine.ls_number_reflns_R_free 1050 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min ? _refine.occupancy_max ? _refine.correlation_coeff_Fo_to_Fc 0.955 _refine.correlation_coeff_Fo_to_Fc_free 0.936 _refine.B_iso_mean 25.386 _refine.aniso_B[1][1] 0.62 _refine.aniso_B[2][2] -0.18 _refine.aniso_B[3][3] -0.44 _refine.aniso_B[1][2] 0.00 _refine.aniso_B[1][3] 0.00 _refine.aniso_B[2][3] 0.00 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.20 _refine.pdbx_solvent_ion_probe_radii 0.80 _refine.pdbx_solvent_shrinkage_radii 0.80 _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.details ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct SAD _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details RANDOM _refine.pdbx_overall_ESU_R 0.079 _refine.pdbx_overall_ESU_R_Free 0.087 _refine.overall_SU_ML 0.045 _refine.pdbx_overall_phase_error ? _refine.overall_SU_B 2.367 _refine.overall_SU_R_Cruickshank_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.B_iso_min ? _refine.B_iso_max ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 936 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 125 _refine_hist.number_atoms_total 1061 _refine_hist.d_res_high 1.50 _refine_hist.d_res_low 45.45 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 0.008 0.022 ? 967 ? 'X-RAY DIFFRACTION' r_angle_refined_deg 1.170 1.977 ? 1307 ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 4.690 5.000 ? 122 ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 30.659 23.846 ? 39 ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 14.033 15.000 ? 190 ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 22.519 15.000 ? 6 ? 'X-RAY DIFFRACTION' r_chiral_restr 0.083 0.200 ? 148 ? 'X-RAY DIFFRACTION' r_gen_planes_refined 0.004 0.020 ? 700 ? 'X-RAY DIFFRACTION' r_nbd_refined 0.203 0.200 ? 389 ? 'X-RAY DIFFRACTION' r_nbtor_refined 0.307 0.200 ? 654 ? 'X-RAY DIFFRACTION' r_xyhbond_nbd_refined 0.151 0.200 ? 90 ? 'X-RAY DIFFRACTION' r_symmetry_vdw_refined 0.155 0.200 ? 44 ? 'X-RAY DIFFRACTION' r_symmetry_hbond_refined 0.162 0.200 ? 12 ? 'X-RAY DIFFRACTION' r_mcbond_it 0.817 1.500 ? 611 ? 'X-RAY DIFFRACTION' r_mcangle_it 1.290 2.000 ? 962 ? 'X-RAY DIFFRACTION' r_scbond_it 2.062 3.000 ? 403 ? 'X-RAY DIFFRACTION' r_scangle_it 3.327 4.500 ? 342 ? 'X-RAY DIFFRACTION' # _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.d_res_high 1.50 _refine_ls_shell.d_res_low 1.543 _refine_ls_shell.number_reflns_R_work 972 _refine_ls_shell.R_factor_R_work 0.189 _refine_ls_shell.percent_reflns_obs 67.01 _refine_ls_shell.R_factor_R_free 0.233 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 58 _refine_ls_shell.number_reflns_all ? _refine_ls_shell.R_factor_all ? _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4I6X _struct.title 'Crystal Structure of Non-catalyic Domain of Protein Disulfide Isomerase-related (PDIr) Protein' _struct.pdbx_descriptor 'Protein disulfide-isomerase A5 (E.C.5.3.4.1)' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4I6X _struct_keywords.pdbx_keywords ISOMERASE _struct_keywords.text 'thioredoxin-like fold, protein binding, endoplasmic reticulum, ISOMERASE' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 ASP A 8 ? ARG A 19 ? ASP A 35 ARG A 46 1 ? 12 HELX_P HELX_P2 2 SER A 29 ? VAL A 47 ? SER A 56 VAL A 74 1 ? 19 HELX_P HELX_P3 3 ASP A 60 ? MET A 70 ? ASP A 87 MET A 97 1 ? 11 HELX_P HELX_P4 4 THR A 100 ? ASP A 110 ? THR A 127 ASP A 137 1 ? 11 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # _struct_conn.id disulf1 _struct_conn.conn_type_id disulf _struct_conn.pdbx_leaving_atom_flag ? _struct_conn.pdbx_PDB_id ? _struct_conn.ptnr1_label_asym_id A _struct_conn.ptnr1_label_comp_id CYS _struct_conn.ptnr1_label_seq_id 58 _struct_conn.ptnr1_label_atom_id SG _struct_conn.pdbx_ptnr1_label_alt_id ? _struct_conn.pdbx_ptnr1_PDB_ins_code ? _struct_conn.pdbx_ptnr1_standard_comp_id ? _struct_conn.ptnr1_symmetry 1_555 _struct_conn.ptnr2_label_asym_id A _struct_conn.ptnr2_label_comp_id CYS _struct_conn.ptnr2_label_seq_id 67 _struct_conn.ptnr2_label_atom_id SG _struct_conn.pdbx_ptnr2_label_alt_id ? _struct_conn.pdbx_ptnr2_PDB_ins_code ? _struct_conn.ptnr1_auth_asym_id A _struct_conn.ptnr1_auth_comp_id CYS _struct_conn.ptnr1_auth_seq_id 85 _struct_conn.ptnr2_auth_asym_id A _struct_conn.ptnr2_auth_comp_id CYS _struct_conn.ptnr2_auth_seq_id 94 _struct_conn.ptnr2_symmetry 1_555 _struct_conn.pdbx_ptnr3_label_atom_id ? _struct_conn.pdbx_ptnr3_label_seq_id ? _struct_conn.pdbx_ptnr3_label_comp_id ? _struct_conn.pdbx_ptnr3_label_asym_id ? _struct_conn.pdbx_ptnr3_label_alt_id ? _struct_conn.pdbx_ptnr3_PDB_ins_code ? _struct_conn.details ? _struct_conn.pdbx_dist_value 2.036 _struct_conn.pdbx_value_order ? # _struct_conn_type.id disulf _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_sheet.id A _struct_sheet.type ? _struct_sheet.number_strands 5 _struct_sheet.details ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? parallel A 2 3 ? parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 GLU A 4 ? ARG A 5 ? GLU A 31 ARG A 32 A 2 THR A 52 ? ASP A 57 ? THR A 79 ASP A 84 A 3 ASN A 21 ? SER A 27 ? ASN A 48 SER A 54 A 4 VAL A 81 ? GLN A 87 ? VAL A 108 GLN A 114 A 5 ALA A 90 ? GLU A 94 ? ALA A 117 GLU A 121 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N GLU A 4 ? N GLU A 31 O TRP A 55 ? O TRP A 82 A 2 3 O VAL A 56 ? O VAL A 83 N LEU A 25 ? N LEU A 52 A 3 4 N TYR A 26 ? N TYR A 53 O GLU A 82 ? O GLU A 109 A 4 5 N HIS A 85 ? N HIS A 112 O HIS A 92 ? O HIS A 119 # _database_PDB_matrix.entry_id 4I6X _database_PDB_matrix.origx[1][1] 1.000000 _database_PDB_matrix.origx[1][2] 0.000000 _database_PDB_matrix.origx[1][3] 0.000000 _database_PDB_matrix.origx[2][1] 0.000000 _database_PDB_matrix.origx[2][2] 1.000000 _database_PDB_matrix.origx[2][3] 0.000000 _database_PDB_matrix.origx[3][1] 0.000000 _database_PDB_matrix.origx[3][2] 0.000000 _database_PDB_matrix.origx[3][3] 1.000000 _database_PDB_matrix.origx_vector[1] 0.00000 _database_PDB_matrix.origx_vector[2] 0.00000 _database_PDB_matrix.origx_vector[3] 0.00000 # _atom_sites.entry_id 4I6X _atom_sites.fract_transf_matrix[1][1] 0.028830 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.000000 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.024234 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.011002 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 MET 1 28 28 MET MET A . n A 1 2 LEU 2 29 29 LEU LEU A . n A 1 3 ILE 3 30 30 ILE ILE A . n A 1 4 GLU 4 31 31 GLU GLU A . n A 1 5 ARG 5 32 32 ARG ARG A . n A 1 6 ILE 6 33 33 ILE ILE A . n A 1 7 SER 7 34 34 SER SER A . n A 1 8 ASP 8 35 35 ASP ASP A . n A 1 9 PRO 9 36 36 PRO PRO A . n A 1 10 LYS 10 37 37 LYS LYS A . n A 1 11 ASP 11 38 38 ASP ASP A . n A 1 12 LEU 12 39 39 LEU LEU A . n A 1 13 LYS 13 40 40 LYS LYS A . n A 1 14 LYS 14 41 41 LYS LYS A . n A 1 15 LEU 15 42 42 LEU LEU A . n A 1 16 LEU 16 43 43 LEU LEU A . n A 1 17 ARG 17 44 44 ARG ARG A . n A 1 18 THR 18 45 45 THR THR A . n A 1 19 ARG 19 46 46 ARG ARG A . n A 1 20 ASN 20 47 47 ASN ASN A . n A 1 21 ASN 21 48 48 ASN ASN A . n A 1 22 VAL 22 49 49 VAL VAL A . n A 1 23 LEU 23 50 50 LEU LEU A . n A 1 24 VAL 24 51 51 VAL VAL A . n A 1 25 LEU 25 52 52 LEU LEU A . n A 1 26 TYR 26 53 53 TYR TYR A . n A 1 27 SER 27 54 54 SER SER A . n A 1 28 LYS 28 55 55 LYS LYS A . n A 1 29 SER 29 56 56 SER SER A . n A 1 30 GLU 30 57 57 GLU GLU A . n A 1 31 VAL 31 58 58 VAL VAL A . n A 1 32 ALA 32 59 59 ALA ALA A . n A 1 33 ALA 33 60 60 ALA ALA A . n A 1 34 GLU 34 61 61 GLU GLU A . n A 1 35 ASN 35 62 62 ASN ASN A . n A 1 36 HIS 36 63 63 HIS HIS A . n A 1 37 LEU 37 64 64 LEU LEU A . n A 1 38 ARG 38 65 65 ARG ARG A . n A 1 39 LEU 39 66 66 LEU LEU A . n A 1 40 LEU 40 67 67 LEU LEU A . n A 1 41 SER 41 68 68 SER SER A . n A 1 42 THR 42 69 69 THR THR A . n A 1 43 VAL 43 70 70 VAL VAL A . n A 1 44 ALA 44 71 71 ALA ALA A . n A 1 45 GLN 45 72 72 GLN GLN A . n A 1 46 ALA 46 73 73 ALA ALA A . n A 1 47 VAL 47 74 74 VAL VAL A . n A 1 48 LYS 48 75 75 LYS LYS A . n A 1 49 GLY 49 76 76 GLY GLY A . n A 1 50 GLN 50 77 77 GLN GLN A . n A 1 51 GLY 51 78 78 GLY GLY A . n A 1 52 THR 52 79 79 THR THR A . n A 1 53 ILE 53 80 80 ILE ILE A . n A 1 54 CYS 54 81 81 CYS CYS A . n A 1 55 TRP 55 82 82 TRP TRP A . n A 1 56 VAL 56 83 83 VAL VAL A . n A 1 57 ASP 57 84 84 ASP ASP A . n A 1 58 CYS 58 85 85 CYS CYS A . n A 1 59 GLY 59 86 86 GLY GLY A . n A 1 60 ASP 60 87 87 ASP ASP A . n A 1 61 ALA 61 88 88 ALA ALA A . n A 1 62 GLU 62 89 89 GLU GLU A . n A 1 63 SER 63 90 90 SER SER A . n A 1 64 ARG 64 91 91 ARG ARG A . n A 1 65 LYS 65 92 92 LYS LYS A . n A 1 66 LEU 66 93 93 LEU LEU A . n A 1 67 CYS 67 94 94 CYS CYS A . n A 1 68 LYS 68 95 95 LYS LYS A . n A 1 69 LYS 69 96 96 LYS LYS A . n A 1 70 MET 70 97 97 MET MET A . n A 1 71 LYS 71 98 98 LYS LYS A . n A 1 72 VAL 72 99 99 VAL VAL A . n A 1 73 ASP 73 100 100 ASP ASP A . n A 1 74 LEU 74 101 101 LEU LEU A . n A 1 75 SER 75 102 102 SER SER A . n A 1 76 PRO 76 103 103 PRO PRO A . n A 1 77 LYS 77 104 104 LYS LYS A . n A 1 78 ASP 78 105 105 ASP ASP A . n A 1 79 LYS 79 106 106 LYS LYS A . n A 1 80 LYS 80 107 107 LYS LYS A . n A 1 81 VAL 81 108 108 VAL VAL A . n A 1 82 GLU 82 109 109 GLU GLU A . n A 1 83 LEU 83 110 110 LEU LEU A . n A 1 84 PHE 84 111 111 PHE PHE A . n A 1 85 HIS 85 112 112 HIS HIS A . n A 1 86 TYR 86 113 113 TYR TYR A . n A 1 87 GLN 87 114 114 GLN GLN A . n A 1 88 ASP 88 115 115 ASP ASP A . n A 1 89 GLY 89 116 116 GLY GLY A . n A 1 90 ALA 90 117 117 ALA ALA A . n A 1 91 PHE 91 118 118 PHE PHE A . n A 1 92 HIS 92 119 119 HIS HIS A . n A 1 93 THR 93 120 120 THR THR A . n A 1 94 GLU 94 121 121 GLU GLU A . n A 1 95 TYR 95 122 122 TYR TYR A . n A 1 96 ASN 96 123 123 ASN ASN A . n A 1 97 ARG 97 124 124 ARG ARG A . n A 1 98 ALA 98 125 125 ALA ALA A . n A 1 99 VAL 99 126 126 VAL VAL A . n A 1 100 THR 100 127 127 THR THR A . n A 1 101 PHE 101 128 128 PHE PHE A . n A 1 102 LYS 102 129 129 LYS LYS A . n A 1 103 SER 103 130 130 SER SER A . n A 1 104 ILE 104 131 131 ILE ILE A . n A 1 105 VAL 105 132 132 VAL VAL A . n A 1 106 ALA 106 133 133 ALA ALA A . n A 1 107 PHE 107 134 134 PHE PHE A . n A 1 108 LEU 108 135 135 LEU LEU A . n A 1 109 LYS 109 136 136 LYS LYS A . n A 1 110 ASP 110 137 137 ASP ASP A . n A 1 111 PRO 111 138 138 PRO PRO A . n A 1 112 LYS 112 139 139 LYS LYS A . n A 1 113 GLY 113 140 140 GLY GLY A . n A 1 114 PRO 114 141 141 PRO PRO A . n A 1 115 PRO 115 142 142 PRO PRO A . n A 1 116 LEU 116 143 143 LEU LEU A . n A 1 117 TRP 117 144 144 TRP TRP A . n A 1 118 GLU 118 145 ? ? ? A . n A 1 119 GLU 119 146 ? ? ? A . n A 1 120 ASP 120 147 ? ? ? A . n A 1 121 PRO 121 148 ? ? ? A . n A 1 122 GLY 122 149 ? ? ? A . n A 1 123 ALA 123 150 ? ? ? A . n A 1 124 LEU 124 151 ? ? ? A . n A 1 125 GLU 125 152 ? ? ? A . n A 1 126 HIS 126 153 ? ? ? A . n A 1 127 HIS 127 154 ? ? ? A . n A 1 128 HIS 128 155 ? ? ? A . n A 1 129 HIS 129 156 ? ? ? A . n A 1 130 HIS 130 157 ? ? ? A . n A 1 131 HIS 131 158 ? ? ? A . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 HOH 1 201 1 HOH HOH A . B 2 HOH 2 202 2 HOH HOH A . B 2 HOH 3 203 3 HOH HOH A . B 2 HOH 4 204 4 HOH HOH A . B 2 HOH 5 205 5 HOH HOH A . B 2 HOH 6 206 6 HOH HOH A . B 2 HOH 7 207 7 HOH HOH A . B 2 HOH 8 208 8 HOH HOH A . B 2 HOH 9 209 9 HOH HOH A . B 2 HOH 10 210 10 HOH HOH A . B 2 HOH 11 211 11 HOH HOH A . B 2 HOH 12 212 12 HOH HOH A . B 2 HOH 13 213 13 HOH HOH A . B 2 HOH 14 214 14 HOH HOH A . B 2 HOH 15 215 15 HOH HOH A . B 2 HOH 16 216 17 HOH HOH A . B 2 HOH 17 217 18 HOH HOH A . B 2 HOH 18 218 19 HOH HOH A . B 2 HOH 19 219 20 HOH HOH A . B 2 HOH 20 220 21 HOH HOH A . B 2 HOH 21 221 22 HOH HOH A . B 2 HOH 22 222 23 HOH HOH A . B 2 HOH 23 223 24 HOH HOH A . B 2 HOH 24 224 25 HOH HOH A . B 2 HOH 25 225 26 HOH HOH A . B 2 HOH 26 226 27 HOH HOH A . B 2 HOH 27 227 28 HOH HOH A . B 2 HOH 28 228 29 HOH HOH A . B 2 HOH 29 229 30 HOH HOH A . B 2 HOH 30 230 31 HOH HOH A . B 2 HOH 31 231 32 HOH HOH A . B 2 HOH 32 232 33 HOH HOH A . B 2 HOH 33 233 34 HOH HOH A . B 2 HOH 34 234 35 HOH HOH A . B 2 HOH 35 235 36 HOH HOH A . B 2 HOH 36 236 37 HOH HOH A . B 2 HOH 37 237 38 HOH HOH A . B 2 HOH 38 238 39 HOH HOH A . B 2 HOH 39 239 40 HOH HOH A . B 2 HOH 40 240 41 HOH HOH A . B 2 HOH 41 241 42 HOH HOH A . B 2 HOH 42 242 43 HOH HOH A . B 2 HOH 43 243 44 HOH HOH A . B 2 HOH 44 244 45 HOH HOH A . B 2 HOH 45 245 46 HOH HOH A . B 2 HOH 46 246 47 HOH HOH A . B 2 HOH 47 247 48 HOH HOH A . B 2 HOH 48 248 49 HOH HOH A . B 2 HOH 49 249 50 HOH HOH A . B 2 HOH 50 250 51 HOH HOH A . B 2 HOH 51 251 52 HOH HOH A . B 2 HOH 52 252 53 HOH HOH A . B 2 HOH 53 253 54 HOH HOH A . B 2 HOH 54 254 55 HOH HOH A . B 2 HOH 55 255 56 HOH HOH A . B 2 HOH 56 256 57 HOH HOH A . B 2 HOH 57 257 58 HOH HOH A . B 2 HOH 58 258 59 HOH HOH A . B 2 HOH 59 259 60 HOH HOH A . B 2 HOH 60 260 62 HOH HOH A . B 2 HOH 61 261 63 HOH HOH A . B 2 HOH 62 262 64 HOH HOH A . B 2 HOH 63 263 65 HOH HOH A . B 2 HOH 64 264 66 HOH HOH A . B 2 HOH 65 265 67 HOH HOH A . B 2 HOH 66 266 68 HOH HOH A . B 2 HOH 67 267 69 HOH HOH A . B 2 HOH 68 268 70 HOH HOH A . B 2 HOH 69 269 71 HOH HOH A . B 2 HOH 70 270 72 HOH HOH A . B 2 HOH 71 271 73 HOH HOH A . B 2 HOH 72 272 74 HOH HOH A . B 2 HOH 73 273 75 HOH HOH A . B 2 HOH 74 274 76 HOH HOH A . B 2 HOH 75 275 78 HOH HOH A . B 2 HOH 76 276 80 HOH HOH A . B 2 HOH 77 277 81 HOH HOH A . B 2 HOH 78 278 82 HOH HOH A . B 2 HOH 79 279 86 HOH HOH A . B 2 HOH 80 280 88 HOH HOH A . B 2 HOH 81 281 89 HOH HOH A . B 2 HOH 82 282 90 HOH HOH A . B 2 HOH 83 283 92 HOH HOH A . B 2 HOH 84 284 93 HOH HOH A . B 2 HOH 85 285 94 HOH HOH A . B 2 HOH 86 286 95 HOH HOH A . B 2 HOH 87 287 100 HOH HOH A . B 2 HOH 88 288 102 HOH HOH A . B 2 HOH 89 289 103 HOH HOH A . B 2 HOH 90 290 105 HOH HOH A . B 2 HOH 91 291 106 HOH HOH A . B 2 HOH 92 292 107 HOH HOH A . B 2 HOH 93 293 108 HOH HOH A . B 2 HOH 94 294 109 HOH HOH A . B 2 HOH 95 295 112 HOH HOH A . B 2 HOH 96 296 128 HOH HOH A . B 2 HOH 97 297 129 HOH HOH A . B 2 HOH 98 298 130 HOH HOH A . B 2 HOH 99 299 131 HOH HOH A . B 2 HOH 100 300 133 HOH HOH A . B 2 HOH 101 301 134 HOH HOH A . B 2 HOH 102 302 137 HOH HOH A . B 2 HOH 103 303 139 HOH HOH A . B 2 HOH 104 304 141 HOH HOH A . B 2 HOH 105 305 144 HOH HOH A . B 2 HOH 106 306 145 HOH HOH A . B 2 HOH 107 307 146 HOH HOH A . B 2 HOH 108 308 147 HOH HOH A . B 2 HOH 109 309 148 HOH HOH A . B 2 HOH 110 310 149 HOH HOH A . B 2 HOH 111 311 150 HOH HOH A . B 2 HOH 112 312 151 HOH HOH A . B 2 HOH 113 313 152 HOH HOH A . B 2 HOH 114 314 153 HOH HOH A . B 2 HOH 115 315 154 HOH HOH A . B 2 HOH 116 316 155 HOH HOH A . B 2 HOH 117 317 156 HOH HOH A . B 2 HOH 118 318 157 HOH HOH A . B 2 HOH 119 319 158 HOH HOH A . B 2 HOH 120 320 159 HOH HOH A . B 2 HOH 121 321 160 HOH HOH A . B 2 HOH 122 322 161 HOH HOH A . B 2 HOH 123 323 162 HOH HOH A . B 2 HOH 124 324 163 HOH HOH A . B 2 HOH 125 325 164 HOH HOH A . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-04-03 2 'Structure model' 1 1 2013-05-08 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group 'Database references' # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] _pdbx_refine_tls.S[3][3] 'X-RAY DIFFRACTION' 1 ? refined -11.9357 3.0688 11.1665 0.0261 0.0355 0.0573 0.0257 -0.0301 -0.0088 2.6052 2.9273 1.7182 1.5663 1.0348 0.1684 -0.0894 0.1134 0.2316 -0.1442 0.0475 0.3952 -0.1679 -0.1505 0.0419 'X-RAY DIFFRACTION' 2 ? refined -11.1641 -7.3968 17.0193 0.0151 0.0499 0.0751 -0.0046 0.0018 -0.0129 1.3502 2.3127 3.7826 0.3272 0.4520 1.0934 -0.0206 -0.0539 -0.1028 -0.0074 -0.0162 0.1568 0.1379 -0.1916 0.0368 'X-RAY DIFFRACTION' 3 ? refined -5.6492 -9.4181 6.0343 0.0413 0.0248 0.0174 -0.0084 0.0316 -0.0554 3.2741 3.1240 2.5875 1.5727 0.5136 1.1964 -0.1598 0.3556 -0.3450 -0.2636 0.0903 -0.0894 0.2133 0.0518 0.0695 'X-RAY DIFFRACTION' 4 ? refined 0.8370 -4.2030 19.0311 0.0196 0.0441 0.0479 -0.0009 0.0006 0.0024 0.1703 2.2509 2.4612 0.1140 -0.2211 -1.4358 -0.0448 -0.0261 -0.0526 -0.0635 -0.0666 -0.1884 0.0531 0.2432 0.1114 'X-RAY DIFFRACTION' 5 ? refined 8.0827 2.8735 19.2507 -0.0032 0.0659 0.1068 -0.0186 0.0438 0.0374 4.6103 4.9340 3.2831 2.5931 -1.0485 -2.6424 -0.0077 0.3559 0.0533 -0.2895 -0.2066 -0.7946 -0.1434 0.5975 0.2143 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection _pdbx_refine_tls_group.selection_details 'X-RAY DIFFRACTION' 1 1 A 28 ? ? A 49 ? ? ? ? 'X-RAY DIFFRACTION' 2 2 A 50 ? ? A 88 ? ? ? ? 'X-RAY DIFFRACTION' 3 3 A 89 ? ? A 113 ? ? ? ? 'X-RAY DIFFRACTION' 4 4 A 114 ? ? A 132 ? ? ? ? 'X-RAY DIFFRACTION' 5 5 A 133 ? ? A 144 ? ? ? ? # loop_ _software.name _software.classification _software.version _software.citation_id _software.pdbx_ordinal ADSC 'data collection' Quantum ? 1 PHENIX 'model building' . ? 2 REFMAC refinement 5.2.0019 ? 3 HKL-2000 'data reduction' . ? 4 HKL-2000 'data scaling' . ? 5 PHENIX phasing . ? 6 # _pdbx_validate_close_contact.id 1 _pdbx_validate_close_contact.PDB_model_num 1 _pdbx_validate_close_contact.auth_atom_id_1 O _pdbx_validate_close_contact.auth_asym_id_1 A _pdbx_validate_close_contact.auth_comp_id_1 HOH _pdbx_validate_close_contact.auth_seq_id_1 309 _pdbx_validate_close_contact.PDB_ins_code_1 ? _pdbx_validate_close_contact.label_alt_id_1 ? _pdbx_validate_close_contact.auth_atom_id_2 O _pdbx_validate_close_contact.auth_asym_id_2 A _pdbx_validate_close_contact.auth_comp_id_2 HOH _pdbx_validate_close_contact.auth_seq_id_2 310 _pdbx_validate_close_contact.PDB_ins_code_2 ? _pdbx_validate_close_contact.label_alt_id_2 ? _pdbx_validate_close_contact.dist 2.10 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLU 145 ? A GLU 118 2 1 Y 1 A GLU 146 ? A GLU 119 3 1 Y 1 A ASP 147 ? A ASP 120 4 1 Y 1 A PRO 148 ? A PRO 121 5 1 Y 1 A GLY 149 ? A GLY 122 6 1 Y 1 A ALA 150 ? A ALA 123 7 1 Y 1 A LEU 151 ? A LEU 124 8 1 Y 1 A GLU 152 ? A GLU 125 9 1 Y 1 A HIS 153 ? A HIS 126 10 1 Y 1 A HIS 154 ? A HIS 127 11 1 Y 1 A HIS 155 ? A HIS 128 12 1 Y 1 A HIS 156 ? A HIS 129 13 1 Y 1 A HIS 157 ? A HIS 130 14 1 Y 1 A HIS 158 ? A HIS 131 # _pdbx_entity_nonpoly.entity_id 2 _pdbx_entity_nonpoly.name water _pdbx_entity_nonpoly.comp_id HOH #