HEADER METAL TRANSPORT 30-NOV-12 4I7I TITLE CRYSTAL STRUCTURE OF RABBIT RYANODINE RECEPTOR 1 (RESIDUES 1-536) TITLE 2 DISEASE MUTANT L14R COMPND MOL_ID: 1; COMPND 2 MOLECULE: RYANODINE RECEPTOR 1; COMPND 3 CHAIN: A; COMPND 4 FRAGMENT: N-TERMINAL DISEASE HOT SPOT, RESIDUES 1-536; COMPND 5 SYNONYM: RYR-1, RYR1, SKELETAL MUSCLE CALCIUM RELEASE CHANNEL, COMPND 6 SKELETAL MUSCLE RYANODINE RECEPTOR, SKELETAL MUSCLE-TYPE RYANODINE COMPND 7 RECEPTOR, TYPE 1 RYANODINE RECEPTOR; COMPND 8 ENGINEERED: YES; COMPND 9 MUTATION: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: ORYCTOLAGUS CUNICULUS; SOURCE 3 ORGANISM_COMMON: RABBIT; SOURCE 4 ORGANISM_TAXID: 9986; SOURCE 5 GENE: RYR1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 511693; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: ROSETTA KEYWDS CALCIUM CHANNEL, SR/ER MEMBRANE, METAL TRANSPORT EXPDTA X-RAY DIFFRACTION AUTHOR L.KIMLICKA,F.VAN PETEGEM REVDAT 3 20-SEP-23 4I7I 1 REMARK SEQADV REVDAT 2 06-MAR-13 4I7I 1 JRNL REVDAT 1 20-FEB-13 4I7I 0 JRNL AUTH L.KIMLICKA,K.LAU,C.C.TUNG,F.VAN PETEGEM JRNL TITL DISEASE MUTATIONS IN THE RYANODINE RECEPTOR N-TERMINAL JRNL TITL 2 REGION COUPLE TO A MOBILE INTERSUBUNIT INTERFACE. JRNL REF NAT COMMUN V. 4 1506 2013 JRNL REFN ESSN 2041-1723 JRNL PMID 23422674 JRNL DOI 10.1038/NCOMMS2501 REMARK 2 REMARK 2 RESOLUTION. 2.90 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.0 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 2.90 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 46.70 REMARK 3 DATA CUTOFF (SIGMA(F)) : NULL REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 35972 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.229 REMARK 3 R VALUE (WORKING SET) : 0.228 REMARK 3 FREE R VALUE : 0.249 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 1894 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 2.90 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 2.98 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2611 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 100.0 REMARK 3 BIN R VALUE (WORKING SET) : 0.3280 REMARK 3 BIN FREE R VALUE SET COUNT : 138 REMARK 3 BIN FREE R VALUE : 0.3040 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 3521 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 6 REMARK 3 SOLVENT ATOMS : 16 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 94.87 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 2.65000 REMARK 3 B22 (A**2) : 2.65000 REMARK 3 B33 (A**2) : -3.97000 REMARK 3 B12 (A**2) : 1.32000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.271 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.230 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.193 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 22.459 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.936 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.920 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 3600 ; 0.006 ; 0.021 REMARK 3 BOND LENGTHS OTHERS (A): NULL ; NULL ; NULL REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 4907 ; 1.013 ; 1.947 REMARK 3 BOND ANGLES OTHERS (DEGREES): NULL ; NULL ; NULL REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 480 ; 5.137 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 137 ;32.021 ;22.993 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 500 ;17.654 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 21 ;20.010 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 576 ; 0.067 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2723 ; 0.004 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 2404 ; 0.467 ; 1.500 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 3761 ; 0.838 ; 2.000 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): 1196 ; 0.584 ; 3.000 REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): 1145 ; 1.026 ; 4.500 REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 3 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 12 A 205 REMARK 3 ORIGIN FOR THE GROUP (A): 60.5550 -80.3670 10.1070 REMARK 3 T TENSOR REMARK 3 T11: 0.2360 T22: 0.6162 REMARK 3 T33: 0.2725 T12: -0.2696 REMARK 3 T13: -0.1282 T23: -0.0742 REMARK 3 L TENSOR REMARK 3 L11: 3.0763 L22: 3.1151 REMARK 3 L33: 4.8227 L12: 1.4599 REMARK 3 L13: 0.7156 L23: 1.6576 REMARK 3 S TENSOR REMARK 3 S11: 0.0453 S12: 0.5573 S13: -0.4546 REMARK 3 S21: -0.1946 S22: 0.6029 S23: -0.1653 REMARK 3 S31: 0.3975 S32: -0.3397 S33: -0.6482 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 206 A 394 REMARK 3 ORIGIN FOR THE GROUP (A): 67.3150 -53.9010 25.2330 REMARK 3 T TENSOR REMARK 3 T11: 0.1426 T22: 0.2293 REMARK 3 T33: 0.0932 T12: -0.0106 REMARK 3 T13: -0.0111 T23: 0.0206 REMARK 3 L TENSOR REMARK 3 L11: 1.9937 L22: 2.9864 REMARK 3 L33: 1.5874 L12: 0.6719 REMARK 3 L13: -0.1241 L23: -0.8556 REMARK 3 S TENSOR REMARK 3 S11: 0.0169 S12: 0.1032 S13: -0.0377 REMARK 3 S21: 0.0137 S22: 0.1496 S23: 0.2518 REMARK 3 S31: -0.2184 S32: -0.2291 S33: -0.1665 REMARK 3 REMARK 3 TLS GROUP : 3 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 395 A 532 REMARK 3 ORIGIN FOR THE GROUP (A): 61.2610 -80.4900 40.5210 REMARK 3 T TENSOR REMARK 3 T11: 0.3420 T22: 0.2935 REMARK 3 T33: 0.2240 T12: -0.2393 REMARK 3 T13: -0.2430 T23: 0.1634 REMARK 3 L TENSOR REMARK 3 L11: 2.8945 L22: 2.0313 REMARK 3 L33: 6.0061 L12: 0.8294 REMARK 3 L13: -1.6212 L23: -0.4332 REMARK 3 S TENSOR REMARK 3 S11: 0.4227 S12: 0.0809 S13: -0.2217 REMARK 3 S21: 0.1143 S22: 0.2736 S23: -0.0249 REMARK 3 S31: 0.7781 S32: -0.7474 S33: -0.6963 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.40 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: HYDROGENS HAVE BEEN ADDED IN THE RIDING REMARK 3 POSITIONS REMARK 4 REMARK 4 4I7I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 05-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076401. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 08-SEP-10 REMARK 200 TEMPERATURE (KELVIN) : NULL REMARK 200 PH : 8.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : CLSI REMARK 200 BEAMLINE : 08ID-1 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.97949 REMARK 200 MONOCHROMATOR : ACCEL/BRUKER DOUBLE CRYSTAL REMARK 200 MONOCHROMATOR (DCM) REMARK 200 OPTICS : NULL REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : MARMOSAIC 300 MM CCD REMARK 200 INTENSITY-INTEGRATION SOFTWARE : SCALA REMARK 200 DATA SCALING SOFTWARE : SCALA REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 37869 REMARK 200 RESOLUTION RANGE HIGH (A) : 2.900 REMARK 200 RESOLUTION RANGE LOW (A) : 49.480 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : 1.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 22.70 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : NULL REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 2.90 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 3.06 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : NULL REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : NULL REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MOLECULAR REPLACEMENT REMARK 200 SOFTWARE USED: PHASER REMARK 200 STARTING MODEL: 2XOA REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 82.76 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 7.14 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: PH 8.0, EVAPORATION REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: H 3 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 Y,X,-Z REMARK 290 5555 X-Y,-Y,-Z REMARK 290 6555 -X,-X+Y,-Z REMARK 290 7555 X+2/3,Y+1/3,Z+1/3 REMARK 290 8555 -Y+2/3,X-Y+1/3,Z+1/3 REMARK 290 9555 -X+Y+2/3,-X+1/3,Z+1/3 REMARK 290 10555 Y+2/3,X+1/3,-Z+1/3 REMARK 290 11555 X-Y+2/3,-Y+1/3,-Z+1/3 REMARK 290 12555 -X+2/3,-X+Y+1/3,-Z+1/3 REMARK 290 13555 X+1/3,Y+2/3,Z+2/3 REMARK 290 14555 -Y+1/3,X-Y+2/3,Z+2/3 REMARK 290 15555 -X+Y+1/3,-X+2/3,Z+2/3 REMARK 290 16555 Y+1/3,X+2/3,-Z+2/3 REMARK 290 17555 X-Y+1/3,-Y+2/3,-Z+2/3 REMARK 290 18555 -X+1/3,-X+Y+2/3,-Z+2/3 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 4 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 5 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 6 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 7 1.000000 0.000000 0.000000 85.70100 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 49.47950 REMARK 290 SMTRY3 7 0.000000 0.000000 1.000000 100.15900 REMARK 290 SMTRY1 8 -0.500000 -0.866025 0.000000 85.70100 REMARK 290 SMTRY2 8 0.866025 -0.500000 0.000000 49.47950 REMARK 290 SMTRY3 8 0.000000 0.000000 1.000000 100.15900 REMARK 290 SMTRY1 9 -0.500000 0.866025 0.000000 85.70100 REMARK 290 SMTRY2 9 -0.866025 -0.500000 0.000000 49.47950 REMARK 290 SMTRY3 9 0.000000 0.000000 1.000000 100.15900 REMARK 290 SMTRY1 10 -0.500000 0.866025 0.000000 85.70100 REMARK 290 SMTRY2 10 0.866025 0.500000 0.000000 49.47950 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 100.15900 REMARK 290 SMTRY1 11 1.000000 0.000000 0.000000 85.70100 REMARK 290 SMTRY2 11 0.000000 -1.000000 0.000000 49.47950 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 100.15900 REMARK 290 SMTRY1 12 -0.500000 -0.866025 0.000000 85.70100 REMARK 290 SMTRY2 12 -0.866025 0.500000 0.000000 49.47950 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 100.15900 REMARK 290 SMTRY1 13 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 13 0.000000 1.000000 0.000000 98.95899 REMARK 290 SMTRY3 13 0.000000 0.000000 1.000000 200.31800 REMARK 290 SMTRY1 14 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 14 0.866025 -0.500000 0.000000 98.95899 REMARK 290 SMTRY3 14 0.000000 0.000000 1.000000 200.31800 REMARK 290 SMTRY1 15 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 15 -0.866025 -0.500000 0.000000 98.95899 REMARK 290 SMTRY3 15 0.000000 0.000000 1.000000 200.31800 REMARK 290 SMTRY1 16 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 16 0.866025 0.500000 0.000000 98.95899 REMARK 290 SMTRY3 16 0.000000 0.000000 -1.000000 200.31800 REMARK 290 SMTRY1 17 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 17 0.000000 -1.000000 0.000000 98.95899 REMARK 290 SMTRY3 17 0.000000 0.000000 -1.000000 200.31800 REMARK 290 SMTRY1 18 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 18 -0.866025 0.500000 0.000000 98.95899 REMARK 290 SMTRY3 18 0.000000 0.000000 -1.000000 200.31800 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 MET A 1 REMARK 465 GLY A 2 REMARK 465 ASP A 3 REMARK 465 GLY A 4 REMARK 465 GLY A 5 REMARK 465 GLU A 6 REMARK 465 GLY A 7 REMARK 465 GLU A 8 REMARK 465 ASP A 9 REMARK 465 GLU A 10 REMARK 465 VAL A 11 REMARK 465 THR A 85 REMARK 465 VAL A 86 REMARK 465 GLU A 87 REMARK 465 ALA A 88 REMARK 465 GLY A 89 REMARK 465 VAL A 90 REMARK 465 GLU A 91 REMARK 465 SER A 92 REMARK 465 SER A 93 REMARK 465 GLN A 94 REMARK 465 GLY A 95 REMARK 465 GLY A 96 REMARK 465 SER A 126 REMARK 465 MET A 127 REMARK 465 THR A 128 REMARK 465 ASP A 129 REMARK 465 HIS A 226 REMARK 465 MET A 227 REMARK 465 ASP A 324 REMARK 465 THR A 325 REMARK 465 ALA A 326 REMARK 465 PRO A 327 REMARK 465 LYS A 328 REMARK 465 PRO A 362 REMARK 465 ASP A 363 REMARK 465 PRO A 364 REMARK 465 LYS A 365 REMARK 465 ALA A 366 REMARK 465 LEU A 367 REMARK 465 ARG A 368 REMARK 465 LEU A 369 REMARK 465 GLY A 370 REMARK 465 VAL A 371 REMARK 465 ARG A 426 REMARK 465 GLY A 427 REMARK 465 SER A 428 REMARK 465 GLY A 429 REMARK 465 PRO A 430 REMARK 465 ALA A 535 REMARK 465 ASN A 536 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 GLN A 12 CG CD OE1 NE2 REMARK 470 PHE A 13 CG CD1 CD2 CE1 CE2 CZ REMARK 470 ARG A 15 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 19 CG CD OE1 OE2 REMARK 470 VAL A 28 CG1 CG2 REMARK 470 LEU A 29 CG CD1 CD2 REMARK 470 LYS A 30 CG CD CE NZ REMARK 470 GLU A 31 CG CD OE1 OE2 REMARK 470 LEU A 33 CG CD1 CD2 REMARK 470 LYS A 34 CG CD CE NZ REMARK 470 GLN A 56 CG CD OE1 NE2 REMARK 470 LEU A 62 CG CD1 CD2 REMARK 470 GLN A 71 CG CD OE1 NE2 REMARK 470 VAL A 75 CG1 CG2 REMARK 470 GLN A 79 CG CD OE1 NE2 REMARK 470 GLU A 80 CG CD OE1 OE2 REMARK 470 MET A 81 CG SD CE REMARK 470 ASN A 84 CG OD1 ND2 REMARK 470 ARG A 99 CG CD NE CZ NH1 NH2 REMARK 470 ARG A 125 CG CD NE CZ NH1 NH2 REMARK 470 LYS A 130 CG CD CE NZ REMARK 470 LEU A 131 CG CD1 CD2 REMARK 470 ASP A 140 CG OD1 OD2 REMARK 470 GLU A 144 CG CD OE1 OE2 REMARK 470 LYS A 155 CG CD CE NZ REMARK 470 GLN A 156 CG CD OE1 NE2 REMARK 470 ARG A 157 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 159 CG CD OE1 OE2 REMARK 470 LYS A 162 CG CD CE NZ REMARK 470 ARG A 164 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 170 CG1 CG2 CD1 REMARK 470 GLU A 177 CG CD OE1 OE2 REMARK 470 SER A 186 OG REMARK 470 GLU A 188 CG CD OE1 OE2 REMARK 470 GLN A 190 CG CD OE1 NE2 REMARK 470 PHE A 195 CG CD1 CD2 CE1 CE2 CZ REMARK 470 MET A 196 CG SD CE REMARK 470 LEU A 199 CG CD1 CD2 REMARK 470 ASP A 237 CG OD1 OD2 REMARK 470 GLN A 241 CG CD OE1 NE2 REMARK 470 ARG A 266 CG CD NE CZ NH1 NH2 REMARK 470 ILE A 267 CG1 CG2 CD1 REMARK 470 ARG A 275 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 296 CG OD1 OD2 REMARK 470 LYS A 306 CG CD CE NZ REMARK 470 LYS A 310 CG CD CE NZ REMARK 470 LYS A 322 CG CD CE NZ REMARK 470 ARG A 329 CG CD NE CZ NH1 NH2 REMARK 470 ASP A 330 CG OD1 OD2 REMARK 470 GLU A 332 CG CD OE1 OE2 REMARK 470 LYS A 340 CG CD CE NZ REMARK 470 LEU A 372 CG CD1 CD2 REMARK 470 GLN A 380 CG CD OE1 NE2 REMARK 470 GLU A 381 CG CD OE1 OE2 REMARK 470 GLU A 396 CG CD OE1 OE2 REMARK 470 LYS A 416 CG CD CE NZ REMARK 470 LYS A 424 CG CD CE NZ REMARK 470 GLU A 439 CG CD OE1 OE2 REMARK 470 SER A 456 OG REMARK 470 GLU A 457 CG CD OE1 OE2 REMARK 470 GLU A 458 CG CD OE1 OE2 REMARK 470 GLN A 460 CG CD OE1 NE2 REMARK 470 GLU A 462 CG CD OE1 OE2 REMARK 470 GLU A 463 CG CD OE1 OE2 REMARK 470 LYS A 464 CG CD CE NZ REMARK 470 GLN A 465 CG CD OE1 NE2 REMARK 470 LYS A 467 CG CD CE NZ REMARK 470 ARG A 469 CG CD NE CZ NH1 NH2 REMARK 470 GLU A 505 CG CD OE1 OE2 REMARK 470 GLU A 509 CG CD OE1 OE2 REMARK 470 GLU A 510 CG CD OE1 OE2 REMARK 470 LYS A 516 CG CD CE NZ REMARK 470 ILE A 530 CG1 CG2 CD1 REMARK 470 ARG A 534 CG CD NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASP A 17 -1.62 83.79 REMARK 500 SER A 207 -148.56 -122.31 REMARK 500 CYS A 253 -7.71 -56.35 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE GOL A 601 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: 2XOA RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF THE N-TERMINAL THREE DOMAINS OF THE SKELETAL REMARK 900 MUSCLE RYANODINE RECEPTOR (RYR1) REMARK 900 RELATED ID: 4I6I RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT RYANODINE RECEPTOR 1 (RESIDUES 1-559) REMARK 900 MUTANT R45C REMARK 900 RELATED ID: 4I3N RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT RYANODINE RECEPTOR 1 (RESIDUES 1-536) REMARK 900 MUTANT D61N REMARK 900 RELATED ID: 4I37 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT RYANODINE RECEPTOR 1 (RESIDUES 1-536) REMARK 900 MUTANT R402G REMARK 900 RELATED ID: 4I2S RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT RYANODINE RECEPTOR 1 (RESIDUES 1-536) REMARK 900 MUTANT I404M REMARK 900 RELATED ID: 4I1E RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT RYANODINE RECEPTOR 1 (RESIDUES 1-536) REMARK 900 MUTANT G249R REMARK 900 RELATED ID: 4I0Y RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT RYANODINE RECEPTOR 1 (RESIDUES 1-536) REMARK 900 MUTANT C36R REMARK 900 RELATED ID: 4I8M RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT RYANODINE RECEPTOR 1 (RESIDUES 1-536) REMARK 900 MUTANT V219I REMARK 900 RELATED ID: 4I96 RELATED DB: PDB REMARK 900 CRYSTAL STRUCTURE OF RABBIT RYANODINE RECEPTOR 1 (RESIDUES 217-536) DBREF 4I7I A 1 536 UNP P11716 RYR1_RABIT 1 536 SEQADV 4I7I ARG A 14 UNP P11716 LEU 14 ENGINEERED MUTATION SEQRES 1 A 536 MET GLY ASP GLY GLY GLU GLY GLU ASP GLU VAL GLN PHE SEQRES 2 A 536 ARG ARG THR ASP ASP GLU VAL VAL LEU GLN CYS SER ALA SEQRES 3 A 536 THR VAL LEU LYS GLU GLN LEU LYS LEU CYS LEU ALA ALA SEQRES 4 A 536 GLU GLY PHE GLY ASN ARG LEU CYS PHE LEU GLU PRO THR SEQRES 5 A 536 SER ASN ALA GLN ASN VAL PRO PRO ASP LEU ALA ILE CYS SEQRES 6 A 536 CYS PHE THR LEU GLU GLN SER LEU SER VAL ARG ALA LEU SEQRES 7 A 536 GLN GLU MET LEU ALA ASN THR VAL GLU ALA GLY VAL GLU SEQRES 8 A 536 SER SER GLN GLY GLY GLY HIS ARG THR LEU LEU TYR GLY SEQRES 9 A 536 HIS ALA ILE LEU LEU ARG HIS ALA HIS SER ARG MET TYR SEQRES 10 A 536 LEU SER CYS LEU THR THR SER ARG SER MET THR ASP LYS SEQRES 11 A 536 LEU ALA PHE ASP VAL GLY LEU GLN GLU ASP ALA THR GLY SEQRES 12 A 536 GLU ALA CYS TRP TRP THR MET HIS PRO ALA SER LYS GLN SEQRES 13 A 536 ARG SER GLU GLY GLU LYS VAL ARG VAL GLY ASP ASP LEU SEQRES 14 A 536 ILE LEU VAL SER VAL SER SER GLU ARG TYR LEU HIS LEU SEQRES 15 A 536 SER THR ALA SER GLY GLU LEU GLN VAL ASP ALA SER PHE SEQRES 16 A 536 MET GLN THR LEU TRP ASN MET ASN PRO ILE CYS SER CYS SEQRES 17 A 536 CYS GLU GLU GLY TYR VAL THR GLY GLY HIS VAL LEU ARG SEQRES 18 A 536 LEU PHE HIS GLY HIS MET ASP GLU CYS LEU THR ILE SER SEQRES 19 A 536 ALA ALA ASP SER ASP ASP GLN ARG ARG LEU VAL TYR TYR SEQRES 20 A 536 GLU GLY GLY ALA VAL CYS THR HIS ALA ARG SER LEU TRP SEQRES 21 A 536 ARG LEU GLU PRO LEU ARG ILE SER TRP SER GLY SER HIS SEQRES 22 A 536 LEU ARG TRP GLY GLN PRO LEU ARG ILE ARG HIS VAL THR SEQRES 23 A 536 THR GLY ARG TYR LEU ALA LEU THR GLU ASP GLN GLY LEU SEQRES 24 A 536 VAL VAL VAL ASP ALA CYS LYS ALA HIS THR LYS ALA THR SEQRES 25 A 536 SER PHE CYS PHE ARG VAL SER LYS GLU LYS LEU ASP THR SEQRES 26 A 536 ALA PRO LYS ARG ASP VAL GLU GLY MET GLY PRO PRO GLU SEQRES 27 A 536 ILE LYS TYR GLY GLU SER LEU CYS PHE VAL GLN HIS VAL SEQRES 28 A 536 ALA SER GLY LEU TRP LEU THR TYR ALA ALA PRO ASP PRO SEQRES 29 A 536 LYS ALA LEU ARG LEU GLY VAL LEU LYS LYS LYS ALA ILE SEQRES 30 A 536 LEU HIS GLN GLU GLY HIS MET ASP ASP ALA LEU PHE LEU SEQRES 31 A 536 THR ARG CYS GLN GLN GLU GLU SER GLN ALA ALA ARG MET SEQRES 32 A 536 ILE HIS SER THR ALA GLY LEU TYR ASN GLN PHE ILE LYS SEQRES 33 A 536 GLY LEU ASP SER PHE SER GLY LYS PRO ARG GLY SER GLY SEQRES 34 A 536 PRO PRO ALA GLY PRO ALA LEU PRO ILE GLU ALA VAL ILE SEQRES 35 A 536 LEU SER LEU GLN ASP LEU ILE GLY TYR PHE GLU PRO PRO SEQRES 36 A 536 SER GLU GLU LEU GLN HIS GLU GLU LYS GLN SER LYS LEU SEQRES 37 A 536 ARG SER LEU ARG ASN ARG GLN SER LEU PHE GLN GLU GLU SEQRES 38 A 536 GLY MET LEU SER LEU VAL LEU ASN CYS ILE ASP ARG LEU SEQRES 39 A 536 ASN VAL TYR THR THR ALA ALA HIS PHE ALA GLU TYR ALA SEQRES 40 A 536 GLY GLU GLU ALA ALA GLU SER TRP LYS GLU ILE VAL ASN SEQRES 41 A 536 LEU LEU TYR GLU LEU LEU ALA SER LEU ILE ARG GLY ASN SEQRES 42 A 536 ARG ALA ASN HET GOL A 601 6 HETNAM GOL GLYCEROL HETSYN GOL GLYCERIN; PROPANE-1,2,3-TRIOL FORMUL 2 GOL C3 H8 O3 FORMUL 3 HOH *16(H2 O) HELIX 1 1 ASP A 61 CYS A 65 5 5 HELIX 2 2 SER A 74 LEU A 82 1 9 HELIX 3 3 GLY A 143 ALA A 145 5 3 HELIX 4 4 GLY A 250 SER A 258 5 9 HELIX 5 5 ASP A 303 ALA A 307 5 5 HELIX 6 6 HIS A 308 SER A 313 1 6 HELIX 7 7 GLN A 394 PHE A 421 1 28 HELIX 8 8 PRO A 437 GLU A 453 1 17 HELIX 9 9 GLN A 460 GLU A 481 1 22 HELIX 10 10 GLY A 482 VAL A 496 1 15 HELIX 11 11 THR A 499 ALA A 507 1 9 HELIX 12 12 GLY A 508 GLU A 513 1 6 HELIX 13 13 SER A 514 ARG A 531 1 18 SHEET 1 A 9 PHE A 48 PRO A 51 0 SHEET 2 A 9 GLN A 32 ALA A 38 -1 N ALA A 38 O PHE A 48 SHEET 3 A 9 GLU A 19 THR A 27 -1 N CYS A 24 O LEU A 35 SHEET 4 A 9 TRP A 200 CYS A 206 -1 O ASN A 201 N GLN A 23 SHEET 5 A 9 ASP A 168 SER A 173 -1 N LEU A 169 O TRP A 200 SHEET 6 A 9 TRP A 147 PRO A 152 -1 N THR A 149 O VAL A 172 SHEET 7 A 9 ALA A 106 HIS A 111 -1 N ILE A 107 O TRP A 148 SHEET 8 A 9 PHE A 67 LEU A 73 -1 N LEU A 73 O ALA A 106 SHEET 9 A 9 GLU A 19 THR A 27 -1 N VAL A 20 O PHE A 67 SHEET 1 B 2 TYR A 117 CYS A 120 0 SHEET 2 B 2 VAL A 135 GLN A 138 -1 O GLY A 136 N SER A 119 SHEET 1 C 2 TYR A 179 THR A 184 0 SHEET 2 C 2 LEU A 189 SER A 194 -1 O GLN A 190 N SER A 183 SHEET 1 D 4 LEU A 280 HIS A 284 0 SHEET 2 D 4 TRP A 260 PRO A 264 -1 N GLU A 263 O ARG A 281 SHEET 3 D 4 VAL A 219 PHE A 223 -1 N LEU A 220 O TRP A 260 SHEET 4 D 4 PHE A 389 ARG A 392 -1 O PHE A 389 N PHE A 223 SHEET 1 E 4 CYS A 230 ILE A 233 0 SHEET 2 E 4 VAL A 245 GLU A 248 -1 O TYR A 246 N THR A 232 SHEET 3 E 4 LYS A 373 HIS A 379 -1 O ALA A 376 N VAL A 245 SHEET 4 E 4 TRP A 356 TYR A 359 -1 N THR A 358 O ILE A 377 SHEET 1 F 2 TYR A 290 THR A 294 0 SHEET 2 F 2 GLY A 298 VAL A 302 -1 O VAL A 302 N TYR A 290 SHEET 1 G 2 PHE A 314 ARG A 317 0 SHEET 2 G 2 PHE A 347 HIS A 350 -1 O PHE A 347 N ARG A 317 CISPEP 1 ALA A 185 SER A 186 0 -7.52 SITE 1 AC1 3 ARG A 266 ILE A 267 SER A 268 CRYST1 171.402 171.402 300.477 90.00 90.00 120.00 H 3 2 18 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.005834 0.003368 0.000000 0.00000 SCALE2 0.000000 0.006737 0.000000 0.00000 SCALE3 0.000000 0.000000 0.003328 0.00000