data_4I8E # _entry.id 4I8E # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.280 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code PDB 4I8E RCSB RCSB076433 WWPDB D_1000076433 # loop_ _pdbx_database_PDB_obs_spr.id _pdbx_database_PDB_obs_spr.date _pdbx_database_PDB_obs_spr.pdb_id _pdbx_database_PDB_obs_spr.replace_pdb_id _pdbx_database_PDB_obs_spr.details SPRSDE 2012-12-26 4I8E 3QD1 ? OBSLTE 2016-04-13 5IUC 4I8E ? # _pdbx_database_status.entry_id 4I8E _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-12-03 _pdbx_database_status.status_code OBS _pdbx_database_status.status_code_sf OBS _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y # loop_ _audit_author.name _audit_author.pdbx_ordinal _audit_author.identifier_ORCID 'Pyburn, T.M.' 1 ? 'Bensing, B.A.' 2 ? 'Xiong, Y.Q.' 3 ? 'Melancon, B.J.' 4 ? 'Tomasiak, T.M.' 5 ? 'Ward, N.J.' 6 ? 'Yankovskaya, V.' 7 ? 'Oliver, K.M.' 8 ? 'Cecchini, G.' 9 ? 'Sulikowski, G.A.' 10 ? 'Tyska, M.J.' 11 ? 'Sullam, P.M.' 12 ? 'Iverson, T.M.' 13 ? # _citation.id primary _citation.title 'A structural model for binding of the serine-rich repeat adhesin GspB to host carbohydrate receptors.' _citation.journal_abbrev 'Plos Pathog.' _citation.journal_volume 7 _citation.page_first e1002112 _citation.page_last e1002112 _citation.year 2011 _citation.journal_id_ASTM ? _citation.country US _citation.journal_id_ISSN 1553-7366 _citation.journal_id_CSD ? _citation.book_publisher ? _citation.pdbx_database_id_PubMed 21765814 _citation.pdbx_database_id_DOI 10.1371/journal.ppat.1002112 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal primary 'Pyburn, T.M.' 1 primary 'Bensing, B.A.' 2 primary 'Xiong, Y.Q.' 3 primary 'Melancon, B.J.' 4 primary 'Tomasiak, T.M.' 5 primary 'Ward, N.J.' 6 primary 'Yankovskaya, V.' 7 primary 'Oliver, K.M.' 8 primary 'Cecchini, G.' 9 primary 'Sulikowski, G.A.' 10 primary 'Tyska, M.J.' 11 primary 'Sullam, P.M.' 12 primary 'Iverson, T.M.' 13 # _cell.length_a 69.900 _cell.length_b 34.029 _cell.length_c 83.394 _cell.angle_alpha 90.000 _cell.angle_beta 99.160 _cell.angle_gamma 90.000 _cell.entry_id 4I8E _cell.pdbx_unique_axis ? _cell.Z_PDB 2 _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.space_group_name_H-M 'P 1 21 1' _symmetry.entry_id 4I8E _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.Int_Tables_number 4 _symmetry.cell_setting ? _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Platelet binding protein GspB' 42763.184 1 ? ? 'UNP residues 233-617' ? 2 non-polymer syn GLYCEROL 92.094 2 ? ? ? ? 3 non-polymer syn 'CADMIUM ION' 112.411 1 ? ? ? ? 4 non-polymer syn 'ethyl 3-O-[5-(acetylamino)-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranonosyl]-1-thio-beta-D-galactopyranoside' 515.529 1 ? ? ? ? 5 non-polymer syn 'NICKEL (II) ION' 58.693 1 ? ? ? ? 6 non-polymer syn 'SODIUM ION' 22.990 1 ? ? ? ? 7 non-polymer syn 'MAGNESIUM ION' 24.305 1 ? ? ? ? 8 water nat water 18.015 213 ? ? ? ? # _entity_name_com.entity_id 1 _entity_name_com.name 'Serine-rich adhesin for platelets, Serine-rich repeat protein GspB' # _entity_poly.entity_id 1 _entity_poly.type 'polypeptide(L)' _entity_poly.nstd_linkage no _entity_poly.nstd_monomer no _entity_poly.pdbx_seq_one_letter_code ;GIPEASSQTGRRRTRRAVTESAPNVEYHDVKGDMIQSVTTSFDDTSRLLTWTINLTPRQVKSNLGALVSISGNQETRTVT INGKNAANGGVYNSGGAWNLYTGESVNNNVLRITTQVNDTGGEVKLGLRLVTSDKKITKTNLPLEFSQVAATTNGSWDKA GYNTTIVEKDTERPVVNVPSEITVYRGESFEYFATVTDNSNAFDLAKTVVRWLYSNQPGRGTEWLQYSVTQVGNQLKVRI FGNVPIDTTIGDYTRYVVATDAAGNVNATQTEMGNAAVDKTSVNGQFKLIIRFRIKTPENTVFVNNPNQLTEVEKNLVRE AVKKSNPDLRAQDVLNSNYVTGITVSNNGTTTITYRDGRKDIIDGSKFIDTRAGSISKSQSTSNSISVNSS ; _entity_poly.pdbx_seq_one_letter_code_can ;GIPEASSQTGRRRTRRAVTESAPNVEYHDVKGDMIQSVTTSFDDTSRLLTWTINLTPRQVKSNLGALVSISGNQETRTVT INGKNAANGGVYNSGGAWNLYTGESVNNNVLRITTQVNDTGGEVKLGLRLVTSDKKITKTNLPLEFSQVAATTNGSWDKA GYNTTIVEKDTERPVVNVPSEITVYRGESFEYFATVTDNSNAFDLAKTVVRWLYSNQPGRGTEWLQYSVTQVGNQLKVRI FGNVPIDTTIGDYTRYVVATDAAGNVNATQTEMGNAAVDKTSVNGQFKLIIRFRIKTPENTVFVNNPNQLTEVEKNLVRE AVKKSNPDLRAQDVLNSNYVTGITVSNNGTTTITYRDGRKDIIDGSKFIDTRAGSISKSQSTSNSISVNSS ; _entity_poly.pdbx_strand_id X _entity_poly.pdbx_target_identifier ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 ILE n 1 3 PRO n 1 4 GLU n 1 5 ALA n 1 6 SER n 1 7 SER n 1 8 GLN n 1 9 THR n 1 10 GLY n 1 11 ARG n 1 12 ARG n 1 13 ARG n 1 14 THR n 1 15 ARG n 1 16 ARG n 1 17 ALA n 1 18 VAL n 1 19 THR n 1 20 GLU n 1 21 SER n 1 22 ALA n 1 23 PRO n 1 24 ASN n 1 25 VAL n 1 26 GLU n 1 27 TYR n 1 28 HIS n 1 29 ASP n 1 30 VAL n 1 31 LYS n 1 32 GLY n 1 33 ASP n 1 34 MET n 1 35 ILE n 1 36 GLN n 1 37 SER n 1 38 VAL n 1 39 THR n 1 40 THR n 1 41 SER n 1 42 PHE n 1 43 ASP n 1 44 ASP n 1 45 THR n 1 46 SER n 1 47 ARG n 1 48 LEU n 1 49 LEU n 1 50 THR n 1 51 TRP n 1 52 THR n 1 53 ILE n 1 54 ASN n 1 55 LEU n 1 56 THR n 1 57 PRO n 1 58 ARG n 1 59 GLN n 1 60 VAL n 1 61 LYS n 1 62 SER n 1 63 ASN n 1 64 LEU n 1 65 GLY n 1 66 ALA n 1 67 LEU n 1 68 VAL n 1 69 SER n 1 70 ILE n 1 71 SER n 1 72 GLY n 1 73 ASN n 1 74 GLN n 1 75 GLU n 1 76 THR n 1 77 ARG n 1 78 THR n 1 79 VAL n 1 80 THR n 1 81 ILE n 1 82 ASN n 1 83 GLY n 1 84 LYS n 1 85 ASN n 1 86 ALA n 1 87 ALA n 1 88 ASN n 1 89 GLY n 1 90 GLY n 1 91 VAL n 1 92 TYR n 1 93 ASN n 1 94 SER n 1 95 GLY n 1 96 GLY n 1 97 ALA n 1 98 TRP n 1 99 ASN n 1 100 LEU n 1 101 TYR n 1 102 THR n 1 103 GLY n 1 104 GLU n 1 105 SER n 1 106 VAL n 1 107 ASN n 1 108 ASN n 1 109 ASN n 1 110 VAL n 1 111 LEU n 1 112 ARG n 1 113 ILE n 1 114 THR n 1 115 THR n 1 116 GLN n 1 117 VAL n 1 118 ASN n 1 119 ASP n 1 120 THR n 1 121 GLY n 1 122 GLY n 1 123 GLU n 1 124 VAL n 1 125 LYS n 1 126 LEU n 1 127 GLY n 1 128 LEU n 1 129 ARG n 1 130 LEU n 1 131 VAL n 1 132 THR n 1 133 SER n 1 134 ASP n 1 135 LYS n 1 136 LYS n 1 137 ILE n 1 138 THR n 1 139 LYS n 1 140 THR n 1 141 ASN n 1 142 LEU n 1 143 PRO n 1 144 LEU n 1 145 GLU n 1 146 PHE n 1 147 SER n 1 148 GLN n 1 149 VAL n 1 150 ALA n 1 151 ALA n 1 152 THR n 1 153 THR n 1 154 ASN n 1 155 GLY n 1 156 SER n 1 157 TRP n 1 158 ASP n 1 159 LYS n 1 160 ALA n 1 161 GLY n 1 162 TYR n 1 163 ASN n 1 164 THR n 1 165 THR n 1 166 ILE n 1 167 VAL n 1 168 GLU n 1 169 LYS n 1 170 ASP n 1 171 THR n 1 172 GLU n 1 173 ARG n 1 174 PRO n 1 175 VAL n 1 176 VAL n 1 177 ASN n 1 178 VAL n 1 179 PRO n 1 180 SER n 1 181 GLU n 1 182 ILE n 1 183 THR n 1 184 VAL n 1 185 TYR n 1 186 ARG n 1 187 GLY n 1 188 GLU n 1 189 SER n 1 190 PHE n 1 191 GLU n 1 192 TYR n 1 193 PHE n 1 194 ALA n 1 195 THR n 1 196 VAL n 1 197 THR n 1 198 ASP n 1 199 ASN n 1 200 SER n 1 201 ASN n 1 202 ALA n 1 203 PHE n 1 204 ASP n 1 205 LEU n 1 206 ALA n 1 207 LYS n 1 208 THR n 1 209 VAL n 1 210 VAL n 1 211 ARG n 1 212 TRP n 1 213 LEU n 1 214 TYR n 1 215 SER n 1 216 ASN n 1 217 GLN n 1 218 PRO n 1 219 GLY n 1 220 ARG n 1 221 GLY n 1 222 THR n 1 223 GLU n 1 224 TRP n 1 225 LEU n 1 226 GLN n 1 227 TYR n 1 228 SER n 1 229 VAL n 1 230 THR n 1 231 GLN n 1 232 VAL n 1 233 GLY n 1 234 ASN n 1 235 GLN n 1 236 LEU n 1 237 LYS n 1 238 VAL n 1 239 ARG n 1 240 ILE n 1 241 PHE n 1 242 GLY n 1 243 ASN n 1 244 VAL n 1 245 PRO n 1 246 ILE n 1 247 ASP n 1 248 THR n 1 249 THR n 1 250 ILE n 1 251 GLY n 1 252 ASP n 1 253 TYR n 1 254 THR n 1 255 ARG n 1 256 TYR n 1 257 VAL n 1 258 VAL n 1 259 ALA n 1 260 THR n 1 261 ASP n 1 262 ALA n 1 263 ALA n 1 264 GLY n 1 265 ASN n 1 266 VAL n 1 267 ASN n 1 268 ALA n 1 269 THR n 1 270 GLN n 1 271 THR n 1 272 GLU n 1 273 MET n 1 274 GLY n 1 275 ASN n 1 276 ALA n 1 277 ALA n 1 278 VAL n 1 279 ASP n 1 280 LYS n 1 281 THR n 1 282 SER n 1 283 VAL n 1 284 ASN n 1 285 GLY n 1 286 GLN n 1 287 PHE n 1 288 LYS n 1 289 LEU n 1 290 ILE n 1 291 ILE n 1 292 ARG n 1 293 PHE n 1 294 ARG n 1 295 ILE n 1 296 LYS n 1 297 THR n 1 298 PRO n 1 299 GLU n 1 300 ASN n 1 301 THR n 1 302 VAL n 1 303 PHE n 1 304 VAL n 1 305 ASN n 1 306 ASN n 1 307 PRO n 1 308 ASN n 1 309 GLN n 1 310 LEU n 1 311 THR n 1 312 GLU n 1 313 VAL n 1 314 GLU n 1 315 LYS n 1 316 ASN n 1 317 LEU n 1 318 VAL n 1 319 ARG n 1 320 GLU n 1 321 ALA n 1 322 VAL n 1 323 LYS n 1 324 LYS n 1 325 SER n 1 326 ASN n 1 327 PRO n 1 328 ASP n 1 329 LEU n 1 330 ARG n 1 331 ALA n 1 332 GLN n 1 333 ASP n 1 334 VAL n 1 335 LEU n 1 336 ASN n 1 337 SER n 1 338 ASN n 1 339 TYR n 1 340 VAL n 1 341 THR n 1 342 GLY n 1 343 ILE n 1 344 THR n 1 345 VAL n 1 346 SER n 1 347 ASN n 1 348 ASN n 1 349 GLY n 1 350 THR n 1 351 THR n 1 352 THR n 1 353 ILE n 1 354 THR n 1 355 TYR n 1 356 ARG n 1 357 ASP n 1 358 GLY n 1 359 ARG n 1 360 LYS n 1 361 ASP n 1 362 ILE n 1 363 ILE n 1 364 ASP n 1 365 GLY n 1 366 SER n 1 367 LYS n 1 368 PHE n 1 369 ILE n 1 370 ASP n 1 371 THR n 1 372 ARG n 1 373 ALA n 1 374 GLY n 1 375 SER n 1 376 ILE n 1 377 SER n 1 378 LYS n 1 379 SER n 1 380 GLN n 1 381 SER n 1 382 THR n 1 383 SER n 1 384 ASN n 1 385 SER n 1 386 ILE n 1 387 SER n 1 388 VAL n 1 389 ASN n 1 390 SER n 1 391 SER n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene gspB _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain ? _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Streptococcus gordonii' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 1302 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 562 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain ? _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pGEX-3X _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # _struct_ref.id 1 _struct_ref.db_name UNP _struct_ref.db_code GSPB_STRGN _struct_ref.pdbx_db_accession Q939N5 _struct_ref.entity_id 1 _struct_ref.pdbx_seq_one_letter_code ;EASSQTGRRRTRRAVTESAPNVEYHDVKGDMIQSVTTSFDDTSRLLTWTINLTPRQVKSNLGALVSISGNQETRTVTING KNAANGGVYNSGGAWNLYTGESVNNNVLRITTQVNDTGGEVKLGLRLVTSDKKITKTNLPLEFSQVAATTNGSWDKAGYN TTIVEKDTERPVVNVPSEITVYRGESFEYFATVTDNSNAFDLAKTVVRWLYNNQPGRGTEWLQYSVTQVGNQLKVRIFGN VPIDTTIGDYTRYVVATDAAGNVNATQTEMGNAAVDKTSVNGQFKLIIRFRIKTPENTVFVNNPNQLTEVEKNLVREAVK KSNPDLRAQDVLNSNYVTGITVSNNGTTTITYRDGRKDIIDGSKFIDTRAGSISKSQSTSNSISV ; _struct_ref.pdbx_align_begin 233 _struct_ref.pdbx_db_isoform ? # _struct_ref_seq.align_id 1 _struct_ref_seq.ref_id 1 _struct_ref_seq.pdbx_PDB_id_code 4I8E _struct_ref_seq.pdbx_strand_id X _struct_ref_seq.seq_align_beg 4 _struct_ref_seq.pdbx_seq_align_beg_ins_code ? _struct_ref_seq.seq_align_end 388 _struct_ref_seq.pdbx_seq_align_end_ins_code ? _struct_ref_seq.pdbx_db_accession Q939N5 _struct_ref_seq.db_align_beg 233 _struct_ref_seq.pdbx_db_align_beg_ins_code ? _struct_ref_seq.db_align_end 617 _struct_ref_seq.pdbx_db_align_end_ins_code ? _struct_ref_seq.pdbx_auth_seq_align_beg 233 _struct_ref_seq.pdbx_auth_seq_align_end 617 # _struct_ref_seq_dif.align_id 1 _struct_ref_seq_dif.pdbx_pdb_id_code 4I8E _struct_ref_seq_dif.mon_id SER _struct_ref_seq_dif.pdbx_pdb_strand_id X _struct_ref_seq_dif.seq_num 215 _struct_ref_seq_dif.pdbx_pdb_ins_code ? _struct_ref_seq_dif.pdbx_seq_db_name UNP _struct_ref_seq_dif.pdbx_seq_db_accession_code Q939N5 _struct_ref_seq_dif.db_mon_id ASN _struct_ref_seq_dif.pdbx_seq_db_seq_num 444 _struct_ref_seq_dif.details 'ENGINEERED MUTATION' _struct_ref_seq_dif.pdbx_auth_seq_num 444 _struct_ref_seq_dif.pdbx_ordinal 1 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 CD non-polymer . 'CADMIUM ION' ? 'Cd 2' 112.411 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 GOL non-polymer . GLYCEROL 'GLYCERIN; PROPANE-1,2,3-TRIOL' 'C3 H8 O3' 92.094 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 HOH non-polymer . WATER ? 'H2 O' 18.015 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 MG non-polymer . 'MAGNESIUM ION' ? 'Mg 2' 24.305 NA non-polymer . 'SODIUM ION' ? 'Na 1' 22.990 NI non-polymer . 'NICKEL (II) ION' ? 'Ni 2' 58.693 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 PRO 'L-peptide linking' y PROLINE ? 'C5 H9 N O2' 115.130 RMY non-polymer . 'ethyl 3-O-[5-(acetylamino)-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranonosyl]-1-thio-beta-D-galactopyranoside' 'alpha-2,3-sialyl (1-thioethyl)galactose' 'C19 H33 N O13 S' 515.529 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TRP 'L-peptide linking' y TRYPTOPHAN ? 'C11 H12 N2 O2' 204.225 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.crystals_number 1 _exptl.entry_id 4I8E _exptl.method 'X-RAY DIFFRACTION' # _exptl_crystal.id 1 _exptl_crystal.density_Matthews 2.29 _exptl_crystal.density_meas ? _exptl_crystal.density_percent_sol 46.28 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.pH 7.4 _exptl_crystal_grow.temp 296.15 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pdbx_details ;6 mg/mL GspB in buffer containing 1 mM alpha-2,3-sialyl(1-thioethyl)galactose and 20 mM Tris, 8% PEG3350, 7.5mM CoCl2, 7.5mM NiCl2, 7.5mM CdCl2, 7.5mM MgCl2, 0.1M HEPES, pH 7.4, VAPOR DIFFUSION, HANGING DROP, temperature 296.15K ; _exptl_crystal_grow.pdbx_pH_range ? # _diffrn.id 1 _diffrn.ambient_temp ? _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'MARMOSAIC 300 mm CCD' _diffrn_detector.pdbx_collection_date 2010-04-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.monochromator ? _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 1.07806 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'APS BEAMLINE 21-ID-D' _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 1.07806 _diffrn_source.pdbx_synchrotron_site APS _diffrn_source.pdbx_synchrotron_beamline 21-ID-D # _reflns.entry_id 4I8E _reflns.observed_criterion_sigma_F 2 _reflns.observed_criterion_sigma_I 2 _reflns.d_resolution_high 1.9 _reflns.d_resolution_low 50 _reflns.number_all ? _reflns.number_obs 29986 _reflns.percent_possible_obs 96.3 _reflns.pdbx_Rmerge_I_obs ? _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI ? _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy ? _reflns.R_free_details ? _reflns.limit_h_max ? _reflns.limit_h_min ? _reflns.limit_k_max ? _reflns.limit_k_min ? _reflns.limit_l_max ? _reflns.limit_l_min ? _reflns.observed_criterion_F_max ? _reflns.observed_criterion_F_min ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? _reflns.pdbx_ordinal 1 _reflns.pdbx_diffrn_id 1 # _refine.entry_id 4I8E _refine.ls_d_res_high 1.9000 _refine.ls_d_res_low 31.4500 _refine.pdbx_ls_sigma_F 0.000 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.ls_percent_reflns_obs 100.0000 _refine.ls_number_reflns_obs 29881 _refine.ls_number_reflns_all ? _refine.pdbx_ls_cross_valid_method THROUGHOUT _refine.pdbx_R_Free_selection_details RANDOM _refine.details 'U VALUES : RESIDUAL ONLY' _refine.ls_R_factor_all ? _refine.ls_R_factor_obs 0.1798 _refine.ls_R_factor_R_work 0.1779 _refine.ls_wR_factor_R_work ? _refine.ls_R_factor_R_free 0.2144 _refine.ls_wR_factor_R_free ? _refine.ls_percent_reflns_R_free 4.9000 _refine.ls_number_reflns_R_free 1477 _refine.ls_R_factor_R_free_error ? _refine.B_iso_mean 31.765 _refine.solvent_model_param_bsol ? _refine.solvent_model_param_ksol ? _refine.pdbx_isotropic_thermal_model ? _refine.aniso_B[1][1] 0.0100 _refine.aniso_B[2][2] -0.0100 _refine.aniso_B[3][3] 0.0000 _refine.aniso_B[1][2] 0.0000 _refine.aniso_B[1][3] -0.0100 _refine.aniso_B[2][3] 0.0000 _refine.correlation_coeff_Fo_to_Fc 0.9570 _refine.correlation_coeff_Fo_to_Fc_free 0.9440 _refine.overall_SU_R_Cruickshank_DPI ? _refine.overall_SU_R_free ? _refine.pdbx_overall_ESU_R 0.1500 _refine.pdbx_overall_ESU_R_Free 0.1360 _refine.overall_SU_ML 0.0910 _refine.overall_SU_B 5.9930 _refine.solvent_model_details 'BABINET MODEL WITH MASK' _refine.pdbx_solvent_vdw_probe_radii 1.4000 _refine.pdbx_solvent_ion_probe_radii 0.8000 _refine.pdbx_solvent_shrinkage_radii 0.8000 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.pdbx_starting_model ? _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_stereochemistry_target_values 'MAXIMUM LIKELIHOOD' _refine.pdbx_stereochem_target_val_spec_case ? _refine.overall_FOM_work_R_set ? _refine.B_iso_max 76.170 _refine.B_iso_min 10.240 _refine.pdbx_overall_phase_error ? _refine.occupancy_max 1.000 _refine.occupancy_min 0.150 _refine.pdbx_ls_sigma_I ? _refine.ls_redundancy_reflns_obs ? _refine.ls_R_factor_R_free_error_details ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.overall_FOM_free_R_set ? _refine.pdbx_diffrn_id 1 _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.pdbx_TLS_residual_ADP_flag ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 2775 _refine_hist.pdbx_number_atoms_nucleic_acid 0 _refine_hist.pdbx_number_atoms_ligand 50 _refine_hist.number_atoms_solvent 213 _refine_hist.number_atoms_total 3038 _refine_hist.d_res_high 1.9000 _refine_hist.d_res_low 31.4500 # loop_ _refine_ls_restr.type _refine_ls_restr.number _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.pdbx_restraint_function _refine_ls_restr.pdbx_refine_id r_bond_refined_d 2879 0.012 0.022 ? ? 'X-RAY DIFFRACTION' r_angle_refined_deg 3937 1.301 1.952 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_1_deg 367 6.242 5.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_2_deg 134 37.447 24.851 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_3_deg 474 13.746 15.000 ? ? 'X-RAY DIFFRACTION' r_dihedral_angle_4_deg 20 18.793 15.000 ? ? 'X-RAY DIFFRACTION' r_chiral_restr 474 0.091 0.200 ? ? 'X-RAY DIFFRACTION' r_gen_planes_refined 2165 0.005 0.021 ? ? 'X-RAY DIFFRACTION' r_mcbond_it 1779 0.635 1.500 ? ? 'X-RAY DIFFRACTION' r_mcangle_it 2914 1.195 2.000 ? ? 'X-RAY DIFFRACTION' r_scbond_it 1100 2.058 3.000 ? ? 'X-RAY DIFFRACTION' r_scangle_it 1016 3.458 4.500 ? ? 'X-RAY DIFFRACTION' # _refine_ls_shell.d_res_high 1.9000 _refine_ls_shell.d_res_low 1.9490 _refine_ls_shell.pdbx_total_number_of_bins_used 20 _refine_ls_shell.percent_reflns_obs 100.0000 _refine_ls_shell.number_reflns_R_work 1987 _refine_ls_shell.R_factor_all ? _refine_ls_shell.R_factor_R_work 0.2070 _refine_ls_shell.R_factor_R_free 0.2710 _refine_ls_shell.percent_reflns_R_free ? _refine_ls_shell.number_reflns_R_free 95 _refine_ls_shell.R_factor_R_free_error ? _refine_ls_shell.number_reflns_all 2082 _refine_ls_shell.number_reflns_obs ? _refine_ls_shell.redundancy_reflns_obs ? _refine_ls_shell.pdbx_refine_id 'X-RAY DIFFRACTION' # _struct.entry_id 4I8E _struct.title 'GspB plus alpha-2,3-sialyl (1-thioethyl)galactose' _struct.pdbx_descriptor 'Platelet binding protein GspB' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4I8E _struct_keywords.pdbx_keywords 'SUGAR BINDING PROTEIN' _struct_keywords.text 'Carbohydrate, antigen, SUGAR BINDING PROTEIN' # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 2 ? C N N 3 ? D N N 2 ? E N N 4 ? F N N 5 ? G N N 6 ? H N N 7 ? I N N 8 ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 GLU A 145 ? VAL A 149 ? GLU X 374 VAL X 378 5 ? 5 HELX_P HELX_P2 2 ASP A 204 ? THR A 208 ? ASP X 433 THR X 437 5 ? 5 HELX_P HELX_P3 3 THR A 269 ? LYS A 280 ? THR X 498 LYS X 509 1 ? 12 HELX_P HELX_P4 4 THR A 311 ? ASN A 326 ? THR X 540 ASN X 555 1 ? 16 HELX_P HELX_P5 5 ARG A 330 ? SER A 337 ? ARG X 559 SER X 566 5 ? 8 HELX_P HELX_P6 6 ASN A 338 ? GLY A 342 ? ASN X 567 GLY X 571 1 ? 5 HELX_P HELX_P7 7 ASP A 364 ? LYS A 367 ? ASP X 593 LYS X 596 5 ? 4 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order metalc1 metalc ? ? A HIS 28 NE2 ? ? ? 1_555 F NI . NI ? ? X HIS 257 X NI 705 1_555 ? ? ? ? ? ? ? 2.088 ? metalc2 metalc ? ? F NI . NI ? ? ? 1_555 I HOH . O ? ? X NI 705 X HOH 839 1_555 ? ? ? ? ? ? ? 2.092 ? metalc3 metalc ? ? F NI . NI ? ? ? 1_555 I HOH . O ? ? X NI 705 X HOH 805 1_555 ? ? ? ? ? ? ? 2.178 ? metalc4 metalc ? ? F NI . NI ? ? ? 1_555 I HOH . O ? ? X NI 705 X HOH 827 1_555 ? ? ? ? ? ? ? 2.211 ? metalc5 metalc ? ? A GLU 172 O ? ? ? 1_555 C CD . CD ? ? X GLU 401 X CD 702 1_555 ? ? ? ? ? ? ? 2.320 ? metalc6 metalc ? ? A ASP 198 OD2 ? ? ? 1_555 C CD . CD ? ? X ASP 427 X CD 702 1_555 ? ? ? ? ? ? ? 2.328 ? metalc7 metalc ? ? A ASP 170 OD2 ? ? ? 1_555 C CD . CD ? ? X ASP 399 X CD 702 1_555 ? ? ? ? ? ? ? 2.360 ? metalc8 metalc ? ? A ASN 199 OD1 ? ? ? 1_555 C CD . CD ? ? X ASN 428 X CD 702 1_555 ? ? ? ? ? ? ? 2.371 ? metalc9 metalc ? ? A ASP 261 OD2 ? ? ? 1_555 C CD . CD ? ? X ASP 490 X CD 702 1_555 ? ? ? ? ? ? ? 2.429 ? metalc10 metalc ? ? A ASP 198 OD1 ? ? ? 1_555 C CD . CD ? ? X ASP 427 X CD 702 1_555 ? ? ? ? ? ? ? 2.458 ? metalc11 metalc ? ? A ASP 170 OD1 ? ? ? 1_555 C CD . CD ? ? X ASP 399 X CD 702 1_555 ? ? ? ? ? ? ? 2.502 ? metalc12 metalc ? ? H MG . MG ? ? ? 1_555 I HOH . O ? ? X MG 707 X HOH 811 1_555 ? ? ? ? ? ? ? 2.701 ? metalc13 metalc ? ? A ASN 234 O ? ? ? 1_555 G NA . NA ? ? X ASN 463 X NA 706 1_555 ? ? ? ? ? ? ? 2.755 ? metalc14 metalc ? ? H MG . MG ? ? ? 1_555 I HOH . O ? ? X MG 707 X HOH 809 1_555 ? ? ? ? ? ? ? 2.757 ? metalc15 metalc ? ? A ASP 198 O ? ? ? 1_555 G NA . NA ? ? X ASP 427 X NA 706 1_555 ? ? ? ? ? ? ? 2.998 ? metalc16 metalc ? ? A ASN 201 OD1 ? ? ? 1_555 G NA . NA ? ? X ASN 430 X NA 706 1_555 ? ? ? ? ? ? ? 3.027 ? # _struct_conn_type.id metalc _struct_conn_type.criteria ? _struct_conn_type.reference ? # loop_ _struct_mon_prot_cis.pdbx_id _struct_mon_prot_cis.label_comp_id _struct_mon_prot_cis.label_seq_id _struct_mon_prot_cis.label_asym_id _struct_mon_prot_cis.label_alt_id _struct_mon_prot_cis.pdbx_PDB_ins_code _struct_mon_prot_cis.auth_comp_id _struct_mon_prot_cis.auth_seq_id _struct_mon_prot_cis.auth_asym_id _struct_mon_prot_cis.pdbx_label_comp_id_2 _struct_mon_prot_cis.pdbx_label_seq_id_2 _struct_mon_prot_cis.pdbx_label_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_ins_code_2 _struct_mon_prot_cis.pdbx_auth_comp_id_2 _struct_mon_prot_cis.pdbx_auth_seq_id_2 _struct_mon_prot_cis.pdbx_auth_asym_id_2 _struct_mon_prot_cis.pdbx_PDB_model_num _struct_mon_prot_cis.pdbx_omega_angle 1 ASN 93 A . ? ASN 322 X SER 94 A ? SER 323 X 1 -8.57 2 SER 94 A . ? SER 323 X GLY 95 A ? GLY 324 X 1 -29.05 # loop_ _struct_sheet.id _struct_sheet.type _struct_sheet.number_strands _struct_sheet.details A ? 6 ? B ? 6 ? C ? 4 ? D ? 4 ? E ? 2 ? F ? 3 ? # loop_ _struct_sheet_order.sheet_id _struct_sheet_order.range_id_1 _struct_sheet_order.range_id_2 _struct_sheet_order.offset _struct_sheet_order.sense A 1 2 ? anti-parallel A 2 3 ? anti-parallel A 3 4 ? anti-parallel A 4 5 ? anti-parallel A 5 6 ? anti-parallel B 1 2 ? anti-parallel B 2 3 ? anti-parallel B 3 4 ? anti-parallel B 4 5 ? anti-parallel B 5 6 ? anti-parallel C 1 2 ? anti-parallel C 2 3 ? anti-parallel C 3 4 ? anti-parallel D 1 2 ? parallel D 2 3 ? anti-parallel D 3 4 ? anti-parallel E 1 2 ? parallel F 1 2 ? anti-parallel F 2 3 ? anti-parallel # loop_ _struct_sheet_range.sheet_id _struct_sheet_range.id _struct_sheet_range.beg_label_comp_id _struct_sheet_range.beg_label_asym_id _struct_sheet_range.beg_label_seq_id _struct_sheet_range.pdbx_beg_PDB_ins_code _struct_sheet_range.end_label_comp_id _struct_sheet_range.end_label_asym_id _struct_sheet_range.end_label_seq_id _struct_sheet_range.pdbx_end_PDB_ins_code _struct_sheet_range.beg_auth_comp_id _struct_sheet_range.beg_auth_asym_id _struct_sheet_range.beg_auth_seq_id _struct_sheet_range.end_auth_comp_id _struct_sheet_range.end_auth_asym_id _struct_sheet_range.end_auth_seq_id A 1 VAL A 18 ? SER A 21 ? VAL X 247 SER X 250 A 2 ILE A 35 ? ASP A 43 ? ILE X 264 ASP X 272 A 3 LEU A 48 ? LEU A 55 ? LEU X 277 LEU X 284 A 4 ASN A 109 ? VAL A 117 ? ASN X 338 VAL X 346 A 5 GLN A 74 ? ILE A 81 ? GLN X 303 ILE X 310 A 6 LYS A 84 ? ASN A 85 ? LYS X 313 ASN X 314 B 1 ASN A 24 ? HIS A 28 ? ASN X 253 HIS X 257 B 2 TRP A 157 ? ILE A 166 ? TRP X 386 ILE X 395 B 3 GLY A 122 ? SER A 133 ? GLY X 351 SER X 362 B 4 ASN A 63 ? ILE A 70 ? ASN X 292 ILE X 299 B 5 TRP A 98 ? GLU A 104 ? TRP X 327 GLU X 333 B 6 ALA A 87 ? VAL A 91 ? ALA X 316 VAL X 320 C 1 VAL A 175 ? ASN A 177 ? VAL X 404 ASN X 406 C 2 SER A 189 ? THR A 197 ? SER X 418 THR X 426 C 3 GLN A 235 ? ASN A 243 ? GLN X 464 ASN X 472 C 4 GLN A 226 ? VAL A 232 ? GLN X 455 VAL X 461 D 1 GLU A 181 ? TYR A 185 ? GLU X 410 TYR X 414 D 2 GLN A 286 ? ARG A 292 ? GLN X 515 ARG X 521 D 3 GLY A 251 ? VAL A 258 ? GLY X 480 VAL X 487 D 4 VAL A 209 ? ARG A 211 ? VAL X 438 ARG X 440 E 1 VAL A 302 ? VAL A 304 ? VAL X 531 VAL X 533 E 2 ILE A 369 ? THR A 371 ? ILE X 598 THR X 600 F 1 ILE A 343 ? VAL A 345 ? ILE X 572 VAL X 574 F 2 THR A 351 ? THR A 354 ? THR X 580 THR X 583 F 3 LYS A 360 ? ILE A 363 ? LYS X 589 ILE X 592 # loop_ _pdbx_struct_sheet_hbond.sheet_id _pdbx_struct_sheet_hbond.range_id_1 _pdbx_struct_sheet_hbond.range_id_2 _pdbx_struct_sheet_hbond.range_1_label_atom_id _pdbx_struct_sheet_hbond.range_1_label_comp_id _pdbx_struct_sheet_hbond.range_1_label_asym_id _pdbx_struct_sheet_hbond.range_1_label_seq_id _pdbx_struct_sheet_hbond.range_1_PDB_ins_code _pdbx_struct_sheet_hbond.range_1_auth_atom_id _pdbx_struct_sheet_hbond.range_1_auth_comp_id _pdbx_struct_sheet_hbond.range_1_auth_asym_id _pdbx_struct_sheet_hbond.range_1_auth_seq_id _pdbx_struct_sheet_hbond.range_2_label_atom_id _pdbx_struct_sheet_hbond.range_2_label_comp_id _pdbx_struct_sheet_hbond.range_2_label_asym_id _pdbx_struct_sheet_hbond.range_2_label_seq_id _pdbx_struct_sheet_hbond.range_2_PDB_ins_code _pdbx_struct_sheet_hbond.range_2_auth_atom_id _pdbx_struct_sheet_hbond.range_2_auth_comp_id _pdbx_struct_sheet_hbond.range_2_auth_asym_id _pdbx_struct_sheet_hbond.range_2_auth_seq_id A 1 2 N SER A 21 ? N SER X 250 O THR A 40 ? O THR X 269 A 2 3 N GLN A 36 ? N GLN X 265 O ASN A 54 ? O ASN X 283 A 3 4 N ILE A 53 ? N ILE X 282 O LEU A 111 ? O LEU X 340 A 4 5 O THR A 114 ? O THR X 343 N ARG A 77 ? N ARG X 306 A 5 6 N ILE A 81 ? N ILE X 310 O LYS A 84 ? O LYS X 313 B 1 2 N TYR A 27 ? N TYR X 256 O GLY A 161 ? O GLY X 390 B 2 3 O THR A 164 ? O THR X 393 N VAL A 124 ? N VAL X 353 B 3 4 O SER A 133 ? O SER X 362 N ASN A 63 ? N ASN X 292 B 4 5 N ALA A 66 ? N ALA X 295 O TYR A 101 ? O TYR X 330 B 5 6 O LEU A 100 ? O LEU X 329 N GLY A 89 ? N GLY X 318 C 1 2 N ASN A 177 ? N ASN X 406 O THR A 195 ? O THR X 424 C 2 3 N TYR A 192 ? N TYR X 421 O ILE A 240 ? O ILE X 469 C 3 4 O LYS A 237 ? O LYS X 466 N THR A 230 ? N THR X 459 D 1 2 N VAL A 184 ? N VAL X 413 O ILE A 290 ? O ILE X 519 D 2 3 O LEU A 289 ? O LEU X 518 N TYR A 253 ? N TYR X 482 D 3 4 O TYR A 256 ? O TYR X 485 N ARG A 211 ? N ARG X 440 E 1 2 N VAL A 302 ? N VAL X 531 O ASP A 370 ? O ASP X 599 F 1 2 N THR A 344 ? N THR X 573 O THR A 352 ? O THR X 581 F 2 3 N THR A 351 ? N THR X 580 O ILE A 363 ? O ILE X 592 # loop_ _struct_site.id _struct_site.pdbx_evidence_code _struct_site.pdbx_auth_asym_id _struct_site.pdbx_auth_comp_id _struct_site.pdbx_auth_seq_id _struct_site.pdbx_auth_ins_code _struct_site.pdbx_num_residues _struct_site.details AC1 Software ? ? ? ? 7 'BINDING SITE FOR RESIDUE GOL X 701' AC2 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE CD X 702' AC3 Software ? ? ? ? 6 'BINDING SITE FOR RESIDUE GOL X 703' AC4 Software ? ? ? ? 15 'BINDING SITE FOR RESIDUE RMY X 704' AC5 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NI X 705' AC6 Software ? ? ? ? 4 'BINDING SITE FOR RESIDUE NA X 706' AC7 Software ? ? ? ? 5 'BINDING SITE FOR RESIDUE MG X 707' # loop_ _struct_site_gen.id _struct_site_gen.site_id _struct_site_gen.pdbx_num_res _struct_site_gen.label_comp_id _struct_site_gen.label_asym_id _struct_site_gen.label_seq_id _struct_site_gen.pdbx_auth_ins_code _struct_site_gen.auth_comp_id _struct_site_gen.auth_asym_id _struct_site_gen.auth_seq_id _struct_site_gen.label_atom_id _struct_site_gen.label_alt_id _struct_site_gen.symmetry _struct_site_gen.details 1 AC1 7 ASP A 33 ? ASP X 262 . ? 1_555 ? 2 AC1 7 MET A 34 ? MET X 263 . ? 1_555 ? 3 AC1 7 ILE A 35 ? ILE X 264 . ? 1_555 ? 4 AC1 7 THR A 56 ? THR X 285 . ? 1_555 ? 5 AC1 7 HOH I . ? HOH X 944 . ? 1_555 ? 6 AC1 7 HOH I . ? HOH X 945 . ? 1_555 ? 7 AC1 7 HOH I . ? HOH X 966 . ? 1_555 ? 8 AC2 5 ASP A 170 ? ASP X 399 . ? 1_555 ? 9 AC2 5 GLU A 172 ? GLU X 401 . ? 1_555 ? 10 AC2 5 ASP A 198 ? ASP X 427 . ? 1_555 ? 11 AC2 5 ASN A 199 ? ASN X 428 . ? 1_555 ? 12 AC2 5 ASP A 261 ? ASP X 490 . ? 1_555 ? 13 AC3 6 ALA A 276 ? ALA X 505 . ? 1_555 ? 14 AC3 6 LYS A 280 ? LYS X 509 . ? 1_555 ? 15 AC3 6 THR A 281 ? THR X 510 . ? 1_555 ? 16 AC3 6 SER A 282 ? SER X 511 . ? 1_555 ? 17 AC3 6 GLN A 286 ? GLN X 515 . ? 1_555 ? 18 AC3 6 HOH I . ? HOH X 938 . ? 1_555 ? 19 AC4 15 TRP A 212 ? TRP X 441 . ? 1_555 ? 20 AC4 15 LEU A 213 ? LEU X 442 . ? 1_555 ? 21 AC4 15 TYR A 214 ? TYR X 443 . ? 1_555 ? 22 AC4 15 ARG A 220 ? ARG X 449 . ? 1_555 ? 23 AC4 15 ASP A 252 ? ASP X 481 . ? 1_555 ? 24 AC4 15 TYR A 253 ? TYR X 482 . ? 1_555 ? 25 AC4 15 THR A 254 ? THR X 483 . ? 1_555 ? 26 AC4 15 ARG A 255 ? ARG X 484 . ? 1_555 ? 27 AC4 15 ALA A 277 ? ALA X 506 . ? 1_555 ? 28 AC4 15 VAL A 278 ? VAL X 507 . ? 1_555 ? 29 AC4 15 HOH I . ? HOH X 997 . ? 1_555 ? 30 AC4 15 HOH I . ? HOH X 999 . ? 1_555 ? 31 AC4 15 HOH I . ? HOH X 1001 . ? 1_555 ? 32 AC4 15 HOH I . ? HOH X 1002 . ? 1_555 ? 33 AC4 15 HOH I . ? HOH X 1013 . ? 1_555 ? 34 AC5 4 HIS A 28 ? HIS X 257 . ? 1_555 ? 35 AC5 4 HOH I . ? HOH X 805 . ? 1_555 ? 36 AC5 4 HOH I . ? HOH X 827 . ? 1_555 ? 37 AC5 4 HOH I . ? HOH X 839 . ? 1_555 ? 38 AC6 4 THR A 197 ? THR X 426 . ? 1_555 ? 39 AC6 4 ASP A 198 ? ASP X 427 . ? 1_555 ? 40 AC6 4 ASN A 201 ? ASN X 430 . ? 1_555 ? 41 AC6 4 ASN A 234 ? ASN X 463 . ? 1_555 ? 42 AC7 5 VAL A 176 ? VAL X 405 . ? 1_555 ? 43 AC7 5 ASN A 177 ? ASN X 406 . ? 1_555 ? 44 AC7 5 VAL A 178 ? VAL X 407 . ? 1_555 ? 45 AC7 5 HOH I . ? HOH X 809 . ? 1_555 ? 46 AC7 5 HOH I . ? HOH X 811 . ? 1_555 ? # _atom_sites.entry_id 4I8E _atom_sites.fract_transf_matrix[1][1] 0.014306 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.002306 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.029387 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.012146 _atom_sites.fract_transf_vector[1] 0.000000 _atom_sites.fract_transf_vector[2] 0.000000 _atom_sites.fract_transf_vector[3] 0.000000 # loop_ _atom_type.symbol C CD MG N NA NI O S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 230 ? ? ? X . n A 1 2 ILE 2 231 ? ? ? X . n A 1 3 PRO 3 232 ? ? ? X . n A 1 4 GLU 4 233 ? ? ? X . n A 1 5 ALA 5 234 ? ? ? X . n A 1 6 SER 6 235 ? ? ? X . n A 1 7 SER 7 236 ? ? ? X . n A 1 8 GLN 8 237 ? ? ? X . n A 1 9 THR 9 238 ? ? ? X . n A 1 10 GLY 10 239 ? ? ? X . n A 1 11 ARG 11 240 ? ? ? X . n A 1 12 ARG 12 241 ? ? ? X . n A 1 13 ARG 13 242 ? ? ? X . n A 1 14 THR 14 243 ? ? ? X . n A 1 15 ARG 15 244 ? ? ? X . n A 1 16 ARG 16 245 245 ARG ARG X . n A 1 17 ALA 17 246 246 ALA ALA X . n A 1 18 VAL 18 247 247 VAL VAL X . n A 1 19 THR 19 248 248 THR THR X . n A 1 20 GLU 20 249 249 GLU GLU X . n A 1 21 SER 21 250 250 SER SER X . n A 1 22 ALA 22 251 251 ALA ALA X . n A 1 23 PRO 23 252 252 PRO PRO X . n A 1 24 ASN 24 253 253 ASN ASN X . n A 1 25 VAL 25 254 254 VAL VAL X . n A 1 26 GLU 26 255 255 GLU GLU X . n A 1 27 TYR 27 256 256 TYR TYR X . n A 1 28 HIS 28 257 257 HIS HIS X . n A 1 29 ASP 29 258 258 ASP ASP X . n A 1 30 VAL 30 259 259 VAL VAL X . n A 1 31 LYS 31 260 260 LYS LYS X . n A 1 32 GLY 32 261 261 GLY GLY X . n A 1 33 ASP 33 262 262 ASP ASP X . n A 1 34 MET 34 263 263 MET MET X . n A 1 35 ILE 35 264 264 ILE ILE X . n A 1 36 GLN 36 265 265 GLN GLN X . n A 1 37 SER 37 266 266 SER SER X . n A 1 38 VAL 38 267 267 VAL VAL X . n A 1 39 THR 39 268 268 THR THR X . n A 1 40 THR 40 269 269 THR THR X . n A 1 41 SER 41 270 270 SER SER X . n A 1 42 PHE 42 271 271 PHE PHE X . n A 1 43 ASP 43 272 272 ASP ASP X . n A 1 44 ASP 44 273 273 ASP ASP X . n A 1 45 THR 45 274 274 THR THR X . n A 1 46 SER 46 275 275 SER SER X . n A 1 47 ARG 47 276 276 ARG ARG X . n A 1 48 LEU 48 277 277 LEU LEU X . n A 1 49 LEU 49 278 278 LEU LEU X . n A 1 50 THR 50 279 279 THR THR X . n A 1 51 TRP 51 280 280 TRP TRP X . n A 1 52 THR 52 281 281 THR THR X . n A 1 53 ILE 53 282 282 ILE ILE X . n A 1 54 ASN 54 283 283 ASN ASN X . n A 1 55 LEU 55 284 284 LEU LEU X . n A 1 56 THR 56 285 285 THR THR X . n A 1 57 PRO 57 286 286 PRO PRO X . n A 1 58 ARG 58 287 287 ARG ARG X . n A 1 59 GLN 59 288 288 GLN GLN X . n A 1 60 VAL 60 289 289 VAL VAL X . n A 1 61 LYS 61 290 290 LYS LYS X . n A 1 62 SER 62 291 291 SER SER X . n A 1 63 ASN 63 292 292 ASN ASN X . n A 1 64 LEU 64 293 293 LEU LEU X . n A 1 65 GLY 65 294 294 GLY GLY X . n A 1 66 ALA 66 295 295 ALA ALA X . n A 1 67 LEU 67 296 296 LEU LEU X . n A 1 68 VAL 68 297 297 VAL VAL X . n A 1 69 SER 69 298 298 SER SER X . n A 1 70 ILE 70 299 299 ILE ILE X . n A 1 71 SER 71 300 300 SER SER X . n A 1 72 GLY 72 301 301 GLY GLY X . n A 1 73 ASN 73 302 302 ASN ASN X . n A 1 74 GLN 74 303 303 GLN GLN X . n A 1 75 GLU 75 304 304 GLU GLU X . n A 1 76 THR 76 305 305 THR THR X . n A 1 77 ARG 77 306 306 ARG ARG X . n A 1 78 THR 78 307 307 THR THR X . n A 1 79 VAL 79 308 308 VAL VAL X . n A 1 80 THR 80 309 309 THR THR X . n A 1 81 ILE 81 310 310 ILE ILE X . n A 1 82 ASN 82 311 311 ASN ASN X . n A 1 83 GLY 83 312 312 GLY GLY X . n A 1 84 LYS 84 313 313 LYS LYS X . n A 1 85 ASN 85 314 314 ASN ASN X . n A 1 86 ALA 86 315 315 ALA ALA X . n A 1 87 ALA 87 316 316 ALA ALA X . n A 1 88 ASN 88 317 317 ASN ASN X . n A 1 89 GLY 89 318 318 GLY GLY X . n A 1 90 GLY 90 319 319 GLY GLY X . n A 1 91 VAL 91 320 320 VAL VAL X . n A 1 92 TYR 92 321 321 TYR TYR X . n A 1 93 ASN 93 322 322 ASN ASN X . n A 1 94 SER 94 323 323 SER SER X . n A 1 95 GLY 95 324 324 GLY GLY X . n A 1 96 GLY 96 325 325 GLY GLY X . n A 1 97 ALA 97 326 326 ALA ALA X . n A 1 98 TRP 98 327 327 TRP TRP X . n A 1 99 ASN 99 328 328 ASN ASN X . n A 1 100 LEU 100 329 329 LEU LEU X . n A 1 101 TYR 101 330 330 TYR TYR X . n A 1 102 THR 102 331 331 THR THR X . n A 1 103 GLY 103 332 332 GLY GLY X . n A 1 104 GLU 104 333 333 GLU GLU X . n A 1 105 SER 105 334 334 SER SER X . n A 1 106 VAL 106 335 335 VAL VAL X . n A 1 107 ASN 107 336 336 ASN ASN X . n A 1 108 ASN 108 337 337 ASN ASN X . n A 1 109 ASN 109 338 338 ASN ASN X . n A 1 110 VAL 110 339 339 VAL VAL X . n A 1 111 LEU 111 340 340 LEU LEU X . n A 1 112 ARG 112 341 341 ARG ARG X . n A 1 113 ILE 113 342 342 ILE ILE X . n A 1 114 THR 114 343 343 THR THR X . n A 1 115 THR 115 344 344 THR THR X . n A 1 116 GLN 116 345 345 GLN GLN X . n A 1 117 VAL 117 346 346 VAL VAL X . n A 1 118 ASN 118 347 347 ASN ASN X . n A 1 119 ASP 119 348 348 ASP ASP X . n A 1 120 THR 120 349 349 THR THR X . n A 1 121 GLY 121 350 350 GLY GLY X . n A 1 122 GLY 122 351 351 GLY GLY X . n A 1 123 GLU 123 352 352 GLU GLU X . n A 1 124 VAL 124 353 353 VAL VAL X . n A 1 125 LYS 125 354 354 LYS LYS X . n A 1 126 LEU 126 355 355 LEU LEU X . n A 1 127 GLY 127 356 356 GLY GLY X . n A 1 128 LEU 128 357 357 LEU LEU X . n A 1 129 ARG 129 358 358 ARG ARG X . n A 1 130 LEU 130 359 359 LEU LEU X . n A 1 131 VAL 131 360 360 VAL VAL X . n A 1 132 THR 132 361 361 THR THR X . n A 1 133 SER 133 362 362 SER SER X . n A 1 134 ASP 134 363 363 ASP ASP X . n A 1 135 LYS 135 364 364 LYS LYS X . n A 1 136 LYS 136 365 365 LYS LYS X . n A 1 137 ILE 137 366 366 ILE ILE X . n A 1 138 THR 138 367 367 THR THR X . n A 1 139 LYS 139 368 368 LYS LYS X . n A 1 140 THR 140 369 369 THR THR X . n A 1 141 ASN 141 370 370 ASN ASN X . n A 1 142 LEU 142 371 371 LEU LEU X . n A 1 143 PRO 143 372 372 PRO PRO X . n A 1 144 LEU 144 373 373 LEU LEU X . n A 1 145 GLU 145 374 374 GLU GLU X . n A 1 146 PHE 146 375 375 PHE PHE X . n A 1 147 SER 147 376 376 SER SER X . n A 1 148 GLN 148 377 377 GLN GLN X . n A 1 149 VAL 149 378 378 VAL VAL X . n A 1 150 ALA 150 379 379 ALA ALA X . n A 1 151 ALA 151 380 380 ALA ALA X . n A 1 152 THR 152 381 381 THR THR X . n A 1 153 THR 153 382 382 THR THR X . n A 1 154 ASN 154 383 383 ASN ASN X . n A 1 155 GLY 155 384 384 GLY GLY X . n A 1 156 SER 156 385 385 SER SER X . n A 1 157 TRP 157 386 386 TRP TRP X . n A 1 158 ASP 158 387 387 ASP ASP X . n A 1 159 LYS 159 388 388 LYS LYS X . n A 1 160 ALA 160 389 389 ALA ALA X . n A 1 161 GLY 161 390 390 GLY GLY X . n A 1 162 TYR 162 391 391 TYR TYR X . n A 1 163 ASN 163 392 392 ASN ASN X . n A 1 164 THR 164 393 393 THR THR X . n A 1 165 THR 165 394 394 THR THR X . n A 1 166 ILE 166 395 395 ILE ILE X . n A 1 167 VAL 167 396 396 VAL VAL X . n A 1 168 GLU 168 397 397 GLU GLU X . n A 1 169 LYS 169 398 398 LYS LYS X . n A 1 170 ASP 170 399 399 ASP ASP X . n A 1 171 THR 171 400 400 THR THR X . n A 1 172 GLU 172 401 401 GLU GLU X . n A 1 173 ARG 173 402 402 ARG ARG X . n A 1 174 PRO 174 403 403 PRO PRO X . n A 1 175 VAL 175 404 404 VAL VAL X . n A 1 176 VAL 176 405 405 VAL VAL X . n A 1 177 ASN 177 406 406 ASN ASN X . n A 1 178 VAL 178 407 407 VAL VAL X . n A 1 179 PRO 179 408 408 PRO PRO X . n A 1 180 SER 180 409 409 SER SER X . n A 1 181 GLU 181 410 410 GLU GLU X . n A 1 182 ILE 182 411 411 ILE ILE X . n A 1 183 THR 183 412 412 THR THR X . n A 1 184 VAL 184 413 413 VAL VAL X . n A 1 185 TYR 185 414 414 TYR TYR X . n A 1 186 ARG 186 415 415 ARG ARG X . n A 1 187 GLY 187 416 416 GLY GLY X . n A 1 188 GLU 188 417 417 GLU GLU X . n A 1 189 SER 189 418 418 SER SER X . n A 1 190 PHE 190 419 419 PHE PHE X . n A 1 191 GLU 191 420 420 GLU GLU X . n A 1 192 TYR 192 421 421 TYR TYR X . n A 1 193 PHE 193 422 422 PHE PHE X . n A 1 194 ALA 194 423 423 ALA ALA X . n A 1 195 THR 195 424 424 THR THR X . n A 1 196 VAL 196 425 425 VAL VAL X . n A 1 197 THR 197 426 426 THR THR X . n A 1 198 ASP 198 427 427 ASP ASP X . n A 1 199 ASN 199 428 428 ASN ASN X . n A 1 200 SER 200 429 429 SER SER X . n A 1 201 ASN 201 430 430 ASN ASN X . n A 1 202 ALA 202 431 431 ALA ALA X . n A 1 203 PHE 203 432 432 PHE PHE X . n A 1 204 ASP 204 433 433 ASP ASP X . n A 1 205 LEU 205 434 434 LEU LEU X . n A 1 206 ALA 206 435 435 ALA ALA X . n A 1 207 LYS 207 436 436 LYS LYS X . n A 1 208 THR 208 437 437 THR THR X . n A 1 209 VAL 209 438 438 VAL VAL X . n A 1 210 VAL 210 439 439 VAL VAL X . n A 1 211 ARG 211 440 440 ARG ARG X . n A 1 212 TRP 212 441 441 TRP TRP X . n A 1 213 LEU 213 442 442 LEU LEU X . n A 1 214 TYR 214 443 443 TYR TYR X . n A 1 215 SER 215 444 444 SER SER X . n A 1 216 ASN 216 445 445 ASN ASN X . n A 1 217 GLN 217 446 446 GLN GLN X . n A 1 218 PRO 218 447 447 PRO PRO X . n A 1 219 GLY 219 448 448 GLY GLY X . n A 1 220 ARG 220 449 449 ARG ARG X . n A 1 221 GLY 221 450 450 GLY GLY X . n A 1 222 THR 222 451 451 THR THR X . n A 1 223 GLU 223 452 452 GLU GLU X . n A 1 224 TRP 224 453 453 TRP TRP X . n A 1 225 LEU 225 454 454 LEU LEU X . n A 1 226 GLN 226 455 455 GLN GLN X . n A 1 227 TYR 227 456 456 TYR TYR X . n A 1 228 SER 228 457 457 SER SER X . n A 1 229 VAL 229 458 458 VAL VAL X . n A 1 230 THR 230 459 459 THR THR X . n A 1 231 GLN 231 460 460 GLN GLN X . n A 1 232 VAL 232 461 461 VAL VAL X . n A 1 233 GLY 233 462 462 GLY GLY X . n A 1 234 ASN 234 463 463 ASN ASN X . n A 1 235 GLN 235 464 464 GLN GLN X . n A 1 236 LEU 236 465 465 LEU LEU X . n A 1 237 LYS 237 466 466 LYS LYS X . n A 1 238 VAL 238 467 467 VAL VAL X . n A 1 239 ARG 239 468 468 ARG ARG X . n A 1 240 ILE 240 469 469 ILE ILE X . n A 1 241 PHE 241 470 470 PHE PHE X . n A 1 242 GLY 242 471 471 GLY GLY X . n A 1 243 ASN 243 472 472 ASN ASN X . n A 1 244 VAL 244 473 473 VAL VAL X . n A 1 245 PRO 245 474 474 PRO PRO X . n A 1 246 ILE 246 475 475 ILE ILE X . n A 1 247 ASP 247 476 476 ASP ASP X . n A 1 248 THR 248 477 477 THR THR X . n A 1 249 THR 249 478 478 THR THR X . n A 1 250 ILE 250 479 479 ILE ILE X . n A 1 251 GLY 251 480 480 GLY GLY X . n A 1 252 ASP 252 481 481 ASP ASP X . n A 1 253 TYR 253 482 482 TYR TYR X . n A 1 254 THR 254 483 483 THR THR X . n A 1 255 ARG 255 484 484 ARG ARG X . n A 1 256 TYR 256 485 485 TYR TYR X . n A 1 257 VAL 257 486 486 VAL VAL X . n A 1 258 VAL 258 487 487 VAL VAL X . n A 1 259 ALA 259 488 488 ALA ALA X . n A 1 260 THR 260 489 489 THR THR X . n A 1 261 ASP 261 490 490 ASP ASP X . n A 1 262 ALA 262 491 491 ALA ALA X . n A 1 263 ALA 263 492 492 ALA ALA X . n A 1 264 GLY 264 493 493 GLY GLY X . n A 1 265 ASN 265 494 494 ASN ASN X . n A 1 266 VAL 266 495 495 VAL VAL X . n A 1 267 ASN 267 496 496 ASN ASN X . n A 1 268 ALA 268 497 497 ALA ALA X . n A 1 269 THR 269 498 498 THR THR X . n A 1 270 GLN 270 499 499 GLN GLN X . n A 1 271 THR 271 500 500 THR THR X . n A 1 272 GLU 272 501 501 GLU GLU X . n A 1 273 MET 273 502 502 MET MET X . n A 1 274 GLY 274 503 503 GLY GLY X . n A 1 275 ASN 275 504 504 ASN ASN X . n A 1 276 ALA 276 505 505 ALA ALA X . n A 1 277 ALA 277 506 506 ALA ALA X . n A 1 278 VAL 278 507 507 VAL VAL X . n A 1 279 ASP 279 508 508 ASP ASP X . n A 1 280 LYS 280 509 509 LYS LYS X . n A 1 281 THR 281 510 510 THR THR X . n A 1 282 SER 282 511 511 SER SER X . n A 1 283 VAL 283 512 512 VAL VAL X . n A 1 284 ASN 284 513 513 ASN ASN X . n A 1 285 GLY 285 514 514 GLY GLY X . n A 1 286 GLN 286 515 515 GLN GLN X . n A 1 287 PHE 287 516 516 PHE PHE X . n A 1 288 LYS 288 517 517 LYS LYS X . n A 1 289 LEU 289 518 518 LEU LEU X . n A 1 290 ILE 290 519 519 ILE ILE X . n A 1 291 ILE 291 520 520 ILE ILE X . n A 1 292 ARG 292 521 521 ARG ARG X . n A 1 293 PHE 293 522 522 PHE PHE X . n A 1 294 ARG 294 523 523 ARG ARG X . n A 1 295 ILE 295 524 524 ILE ILE X . n A 1 296 LYS 296 525 525 LYS LYS X . n A 1 297 THR 297 526 526 THR THR X . n A 1 298 PRO 298 527 527 PRO PRO X . n A 1 299 GLU 299 528 528 GLU GLU X . n A 1 300 ASN 300 529 529 ASN ASN X . n A 1 301 THR 301 530 530 THR THR X . n A 1 302 VAL 302 531 531 VAL VAL X . n A 1 303 PHE 303 532 532 PHE PHE X . n A 1 304 VAL 304 533 533 VAL VAL X . n A 1 305 ASN 305 534 534 ASN ASN X . n A 1 306 ASN 306 535 535 ASN ASN X . n A 1 307 PRO 307 536 536 PRO PRO X . n A 1 308 ASN 308 537 537 ASN ASN X . n A 1 309 GLN 309 538 538 GLN GLN X . n A 1 310 LEU 310 539 539 LEU LEU X . n A 1 311 THR 311 540 540 THR THR X . n A 1 312 GLU 312 541 541 GLU GLU X . n A 1 313 VAL 313 542 542 VAL VAL X . n A 1 314 GLU 314 543 543 GLU GLU X . n A 1 315 LYS 315 544 544 LYS LYS X . n A 1 316 ASN 316 545 545 ASN ASN X . n A 1 317 LEU 317 546 546 LEU LEU X . n A 1 318 VAL 318 547 547 VAL VAL X . n A 1 319 ARG 319 548 548 ARG ARG X . n A 1 320 GLU 320 549 549 GLU GLU X . n A 1 321 ALA 321 550 550 ALA ALA X . n A 1 322 VAL 322 551 551 VAL VAL X . n A 1 323 LYS 323 552 552 LYS LYS X . n A 1 324 LYS 324 553 553 LYS LYS X . n A 1 325 SER 325 554 554 SER SER X . n A 1 326 ASN 326 555 555 ASN ASN X . n A 1 327 PRO 327 556 556 PRO PRO X . n A 1 328 ASP 328 557 557 ASP ASP X . n A 1 329 LEU 329 558 558 LEU LEU X . n A 1 330 ARG 330 559 559 ARG ARG X . n A 1 331 ALA 331 560 560 ALA ALA X . n A 1 332 GLN 332 561 561 GLN GLN X . n A 1 333 ASP 333 562 562 ASP ASP X . n A 1 334 VAL 334 563 563 VAL VAL X . n A 1 335 LEU 335 564 564 LEU LEU X . n A 1 336 ASN 336 565 565 ASN ASN X . n A 1 337 SER 337 566 566 SER SER X . n A 1 338 ASN 338 567 567 ASN ASN X . n A 1 339 TYR 339 568 568 TYR TYR X . n A 1 340 VAL 340 569 569 VAL VAL X . n A 1 341 THR 341 570 570 THR THR X . n A 1 342 GLY 342 571 571 GLY GLY X . n A 1 343 ILE 343 572 572 ILE ILE X . n A 1 344 THR 344 573 573 THR THR X . n A 1 345 VAL 345 574 574 VAL VAL X . n A 1 346 SER 346 575 575 SER SER X . n A 1 347 ASN 347 576 576 ASN ASN X . n A 1 348 ASN 348 577 577 ASN ASN X . n A 1 349 GLY 349 578 578 GLY GLY X . n A 1 350 THR 350 579 579 THR THR X . n A 1 351 THR 351 580 580 THR THR X . n A 1 352 THR 352 581 581 THR THR X . n A 1 353 ILE 353 582 582 ILE ILE X . n A 1 354 THR 354 583 583 THR THR X . n A 1 355 TYR 355 584 584 TYR TYR X . n A 1 356 ARG 356 585 585 ARG ARG X . n A 1 357 ASP 357 586 586 ASP ASP X . n A 1 358 GLY 358 587 587 GLY GLY X . n A 1 359 ARG 359 588 588 ARG ARG X . n A 1 360 LYS 360 589 589 LYS LYS X . n A 1 361 ASP 361 590 590 ASP ASP X . n A 1 362 ILE 362 591 591 ILE ILE X . n A 1 363 ILE 363 592 592 ILE ILE X . n A 1 364 ASP 364 593 593 ASP ASP X . n A 1 365 GLY 365 594 594 GLY GLY X . n A 1 366 SER 366 595 595 SER SER X . n A 1 367 LYS 367 596 596 LYS LYS X . n A 1 368 PHE 368 597 597 PHE PHE X . n A 1 369 ILE 369 598 598 ILE ILE X . n A 1 370 ASP 370 599 599 ASP ASP X . n A 1 371 THR 371 600 600 THR THR X . n A 1 372 ARG 372 601 601 ARG ARG X . n A 1 373 ALA 373 602 602 ALA ALA X . n A 1 374 GLY 374 603 603 GLY GLY X . n A 1 375 SER 375 604 ? ? ? X . n A 1 376 ILE 376 605 ? ? ? X . n A 1 377 SER 377 606 ? ? ? X . n A 1 378 LYS 378 607 ? ? ? X . n A 1 379 SER 379 608 ? ? ? X . n A 1 380 GLN 380 609 ? ? ? X . n A 1 381 SER 381 610 ? ? ? X . n A 1 382 THR 382 611 ? ? ? X . n A 1 383 SER 383 612 ? ? ? X . n A 1 384 ASN 384 613 ? ? ? X . n A 1 385 SER 385 614 ? ? ? X . n A 1 386 ILE 386 615 ? ? ? X . n A 1 387 SER 387 616 ? ? ? X . n A 1 388 VAL 388 617 ? ? ? X . n A 1 389 ASN 389 618 ? ? ? X . n A 1 390 SER 390 619 ? ? ? X . n A 1 391 SER 391 620 ? ? ? X . n # loop_ _pdbx_nonpoly_scheme.asym_id _pdbx_nonpoly_scheme.entity_id _pdbx_nonpoly_scheme.mon_id _pdbx_nonpoly_scheme.ndb_seq_num _pdbx_nonpoly_scheme.pdb_seq_num _pdbx_nonpoly_scheme.auth_seq_num _pdbx_nonpoly_scheme.pdb_mon_id _pdbx_nonpoly_scheme.auth_mon_id _pdbx_nonpoly_scheme.pdb_strand_id _pdbx_nonpoly_scheme.pdb_ins_code B 2 GOL 1 701 1 GOL GOL X . C 3 CD 1 702 1 CD CD X . D 2 GOL 1 703 1 GOL GOL X . E 4 RMY 1 704 1 RMY RMY X . F 5 NI 1 705 1 NI NI X . G 6 NA 1 706 1 NA NA X . H 7 MG 1 707 1 MG MG X . I 8 HOH 1 801 1 HOH HOH X . I 8 HOH 2 802 2 HOH HOH X . I 8 HOH 3 803 3 HOH HOH X . I 8 HOH 4 804 4 HOH HOH X . I 8 HOH 5 805 5 HOH HOH X . I 8 HOH 6 806 6 HOH HOH X . I 8 HOH 7 807 7 HOH HOH X . I 8 HOH 8 808 8 HOH HOH X . I 8 HOH 9 809 9 HOH HOH X . I 8 HOH 10 810 10 HOH HOH X . I 8 HOH 11 811 11 HOH HOH X . I 8 HOH 12 812 12 HOH HOH X . I 8 HOH 13 813 13 HOH HOH X . I 8 HOH 14 814 14 HOH HOH X . I 8 HOH 15 815 15 HOH HOH X . I 8 HOH 16 816 16 HOH HOH X . I 8 HOH 17 817 17 HOH HOH X . I 8 HOH 18 818 18 HOH HOH X . I 8 HOH 19 819 19 HOH HOH X . I 8 HOH 20 820 20 HOH HOH X . I 8 HOH 21 821 21 HOH HOH X . I 8 HOH 22 822 22 HOH HOH X . I 8 HOH 23 823 23 HOH HOH X . I 8 HOH 24 824 24 HOH HOH X . I 8 HOH 25 825 25 HOH HOH X . I 8 HOH 26 826 26 HOH HOH X . I 8 HOH 27 827 27 HOH HOH X . I 8 HOH 28 828 28 HOH HOH X . I 8 HOH 29 829 29 HOH HOH X . I 8 HOH 30 830 30 HOH HOH X . I 8 HOH 31 831 31 HOH HOH X . I 8 HOH 32 832 32 HOH HOH X . I 8 HOH 33 833 33 HOH HOH X . I 8 HOH 34 834 34 HOH HOH X . I 8 HOH 35 835 35 HOH HOH X . I 8 HOH 36 836 36 HOH HOH X . I 8 HOH 37 837 37 HOH HOH X . I 8 HOH 38 838 38 HOH HOH X . I 8 HOH 39 839 39 HOH HOH X . I 8 HOH 40 840 40 HOH HOH X . I 8 HOH 41 841 41 HOH HOH X . I 8 HOH 42 842 42 HOH HOH X . I 8 HOH 43 843 43 HOH HOH X . I 8 HOH 44 844 44 HOH HOH X . I 8 HOH 45 845 45 HOH HOH X . I 8 HOH 46 846 46 HOH HOH X . I 8 HOH 47 847 47 HOH HOH X . I 8 HOH 48 848 48 HOH HOH X . I 8 HOH 49 849 49 HOH HOH X . I 8 HOH 50 850 50 HOH HOH X . I 8 HOH 51 851 51 HOH HOH X . I 8 HOH 52 852 52 HOH HOH X . I 8 HOH 53 853 53 HOH HOH X . I 8 HOH 54 854 54 HOH HOH X . I 8 HOH 55 855 55 HOH HOH X . I 8 HOH 56 856 56 HOH HOH X . I 8 HOH 57 857 57 HOH HOH X . I 8 HOH 58 858 58 HOH HOH X . I 8 HOH 59 859 59 HOH HOH X . I 8 HOH 60 860 60 HOH HOH X . I 8 HOH 61 861 61 HOH HOH X . I 8 HOH 62 862 62 HOH HOH X . I 8 HOH 63 863 63 HOH HOH X . I 8 HOH 64 864 64 HOH HOH X . I 8 HOH 65 865 65 HOH HOH X . I 8 HOH 66 866 66 HOH HOH X . I 8 HOH 67 867 67 HOH HOH X . I 8 HOH 68 868 68 HOH HOH X . I 8 HOH 69 869 69 HOH HOH X . I 8 HOH 70 870 70 HOH HOH X . I 8 HOH 71 871 71 HOH HOH X . I 8 HOH 72 872 72 HOH HOH X . I 8 HOH 73 873 73 HOH HOH X . I 8 HOH 74 874 74 HOH HOH X . I 8 HOH 75 875 75 HOH HOH X . I 8 HOH 76 876 76 HOH HOH X . I 8 HOH 77 877 77 HOH HOH X . I 8 HOH 78 878 78 HOH HOH X . I 8 HOH 79 879 79 HOH HOH X . I 8 HOH 80 880 80 HOH HOH X . I 8 HOH 81 881 81 HOH HOH X . I 8 HOH 82 882 82 HOH HOH X . I 8 HOH 83 883 83 HOH HOH X . I 8 HOH 84 884 84 HOH HOH X . I 8 HOH 85 885 85 HOH HOH X . I 8 HOH 86 886 86 HOH HOH X . I 8 HOH 87 887 87 HOH HOH X . I 8 HOH 88 888 88 HOH HOH X . I 8 HOH 89 889 89 HOH HOH X . I 8 HOH 90 890 90 HOH HOH X . I 8 HOH 91 891 91 HOH HOH X . I 8 HOH 92 892 92 HOH HOH X . I 8 HOH 93 893 93 HOH HOH X . I 8 HOH 94 894 94 HOH HOH X . I 8 HOH 95 895 95 HOH HOH X . I 8 HOH 96 896 96 HOH HOH X . I 8 HOH 97 897 97 HOH HOH X . I 8 HOH 98 898 98 HOH HOH X . I 8 HOH 99 899 99 HOH HOH X . I 8 HOH 100 900 100 HOH HOH X . I 8 HOH 101 901 101 HOH HOH X . I 8 HOH 102 902 102 HOH HOH X . I 8 HOH 103 903 103 HOH HOH X . I 8 HOH 104 904 104 HOH HOH X . I 8 HOH 105 905 105 HOH HOH X . I 8 HOH 106 906 106 HOH HOH X . I 8 HOH 107 907 107 HOH HOH X . I 8 HOH 108 908 108 HOH HOH X . I 8 HOH 109 909 109 HOH HOH X . I 8 HOH 110 910 110 HOH HOH X . I 8 HOH 111 911 111 HOH HOH X . I 8 HOH 112 912 112 HOH HOH X . I 8 HOH 113 913 113 HOH HOH X . I 8 HOH 114 914 114 HOH HOH X . I 8 HOH 115 915 115 HOH HOH X . I 8 HOH 116 916 116 HOH HOH X . I 8 HOH 117 917 117 HOH HOH X . I 8 HOH 118 918 118 HOH HOH X . I 8 HOH 119 919 119 HOH HOH X . I 8 HOH 120 920 120 HOH HOH X . I 8 HOH 121 921 121 HOH HOH X . I 8 HOH 122 922 122 HOH HOH X . I 8 HOH 123 923 123 HOH HOH X . I 8 HOH 124 924 124 HOH HOH X . I 8 HOH 125 925 125 HOH HOH X . I 8 HOH 126 926 126 HOH HOH X . I 8 HOH 127 927 127 HOH HOH X . I 8 HOH 128 928 128 HOH HOH X . I 8 HOH 129 929 129 HOH HOH X . I 8 HOH 130 930 130 HOH HOH X . I 8 HOH 131 931 131 HOH HOH X . I 8 HOH 132 932 132 HOH HOH X . I 8 HOH 133 933 133 HOH HOH X . I 8 HOH 134 934 134 HOH HOH X . I 8 HOH 135 935 135 HOH HOH X . I 8 HOH 136 936 136 HOH HOH X . I 8 HOH 137 937 137 HOH HOH X . I 8 HOH 138 938 138 HOH HOH X . I 8 HOH 139 939 139 HOH HOH X . I 8 HOH 140 940 140 HOH HOH X . I 8 HOH 141 941 141 HOH HOH X . I 8 HOH 142 942 142 HOH HOH X . I 8 HOH 143 943 143 HOH HOH X . I 8 HOH 144 944 144 HOH HOH X . I 8 HOH 145 945 145 HOH HOH X . I 8 HOH 146 946 146 HOH HOH X . I 8 HOH 147 947 147 HOH HOH X . I 8 HOH 148 948 148 HOH HOH X . I 8 HOH 149 949 149 HOH HOH X . I 8 HOH 150 950 150 HOH HOH X . I 8 HOH 151 951 151 HOH HOH X . I 8 HOH 152 952 152 HOH HOH X . I 8 HOH 153 953 153 HOH HOH X . I 8 HOH 154 954 154 HOH HOH X . I 8 HOH 155 955 155 HOH HOH X . I 8 HOH 156 956 156 HOH HOH X . I 8 HOH 157 957 157 HOH HOH X . I 8 HOH 158 958 158 HOH HOH X . I 8 HOH 159 959 159 HOH HOH X . I 8 HOH 160 960 160 HOH HOH X . I 8 HOH 161 961 161 HOH HOH X . I 8 HOH 162 962 162 HOH HOH X . I 8 HOH 163 963 163 HOH HOH X . I 8 HOH 164 964 164 HOH HOH X . I 8 HOH 165 965 165 HOH HOH X . I 8 HOH 166 966 166 HOH HOH X . I 8 HOH 167 967 167 HOH HOH X . I 8 HOH 168 968 168 HOH HOH X . I 8 HOH 169 969 169 HOH HOH X . I 8 HOH 170 970 170 HOH HOH X . I 8 HOH 171 971 171 HOH HOH X . I 8 HOH 172 972 172 HOH HOH X . I 8 HOH 173 973 173 HOH HOH X . I 8 HOH 174 974 174 HOH HOH X . I 8 HOH 175 975 175 HOH HOH X . I 8 HOH 176 976 176 HOH HOH X . I 8 HOH 177 977 177 HOH HOH X . I 8 HOH 178 978 178 HOH HOH X . I 8 HOH 179 979 179 HOH HOH X . I 8 HOH 180 980 180 HOH HOH X . I 8 HOH 181 981 181 HOH HOH X . I 8 HOH 182 982 182 HOH HOH X . I 8 HOH 183 983 183 HOH HOH X . I 8 HOH 184 984 184 HOH HOH X . I 8 HOH 185 985 185 HOH HOH X . I 8 HOH 186 986 186 HOH HOH X . I 8 HOH 187 987 187 HOH HOH X . I 8 HOH 188 988 188 HOH HOH X . I 8 HOH 189 989 189 HOH HOH X . I 8 HOH 190 990 190 HOH HOH X . I 8 HOH 191 991 191 HOH HOH X . I 8 HOH 192 992 192 HOH HOH X . I 8 HOH 193 993 193 HOH HOH X . I 8 HOH 194 994 194 HOH HOH X . I 8 HOH 195 995 195 HOH HOH X . I 8 HOH 196 996 196 HOH HOH X . I 8 HOH 197 997 197 HOH HOH X . I 8 HOH 198 998 198 HOH HOH X . I 8 HOH 199 999 199 HOH HOH X . I 8 HOH 200 1000 200 HOH HOH X . I 8 HOH 201 1001 201 HOH HOH X . I 8 HOH 202 1002 202 HOH HOH X . I 8 HOH 203 1003 203 HOH HOH X . I 8 HOH 204 1004 204 HOH HOH X . I 8 HOH 205 1005 205 HOH HOH X . I 8 HOH 206 1006 206 HOH HOH X . I 8 HOH 207 1007 207 HOH HOH X . I 8 HOH 208 1008 208 HOH HOH X . I 8 HOH 209 1009 209 HOH HOH X . I 8 HOH 210 1010 210 HOH HOH X . I 8 HOH 211 1011 211 HOH HOH X . I 8 HOH 212 1012 212 HOH HOH X . I 8 HOH 213 1013 213 HOH HOH X . # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details monomeric _pdbx_struct_assembly.oligomeric_count 1 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D,E,F,G,H,I # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_struct_conn_angle.id _pdbx_struct_conn_angle.ptnr1_label_atom_id _pdbx_struct_conn_angle.ptnr1_label_alt_id _pdbx_struct_conn_angle.ptnr1_label_asym_id _pdbx_struct_conn_angle.ptnr1_label_comp_id _pdbx_struct_conn_angle.ptnr1_label_seq_id _pdbx_struct_conn_angle.ptnr1_auth_atom_id _pdbx_struct_conn_angle.ptnr1_auth_asym_id _pdbx_struct_conn_angle.ptnr1_auth_comp_id _pdbx_struct_conn_angle.ptnr1_auth_seq_id _pdbx_struct_conn_angle.ptnr1_PDB_ins_code _pdbx_struct_conn_angle.ptnr1_symmetry _pdbx_struct_conn_angle.ptnr2_label_atom_id _pdbx_struct_conn_angle.ptnr2_label_alt_id _pdbx_struct_conn_angle.ptnr2_label_asym_id _pdbx_struct_conn_angle.ptnr2_label_comp_id _pdbx_struct_conn_angle.ptnr2_label_seq_id _pdbx_struct_conn_angle.ptnr2_auth_atom_id _pdbx_struct_conn_angle.ptnr2_auth_asym_id _pdbx_struct_conn_angle.ptnr2_auth_comp_id _pdbx_struct_conn_angle.ptnr2_auth_seq_id _pdbx_struct_conn_angle.ptnr2_PDB_ins_code _pdbx_struct_conn_angle.ptnr2_symmetry _pdbx_struct_conn_angle.ptnr3_label_atom_id _pdbx_struct_conn_angle.ptnr3_label_alt_id _pdbx_struct_conn_angle.ptnr3_label_asym_id _pdbx_struct_conn_angle.ptnr3_label_comp_id _pdbx_struct_conn_angle.ptnr3_label_seq_id _pdbx_struct_conn_angle.ptnr3_auth_atom_id _pdbx_struct_conn_angle.ptnr3_auth_asym_id _pdbx_struct_conn_angle.ptnr3_auth_comp_id _pdbx_struct_conn_angle.ptnr3_auth_seq_id _pdbx_struct_conn_angle.ptnr3_PDB_ins_code _pdbx_struct_conn_angle.ptnr3_symmetry _pdbx_struct_conn_angle.value _pdbx_struct_conn_angle.value_esd 1 NE2 ? A HIS 28 ? X HIS 257 ? 1_555 NI ? F NI . ? X NI 705 ? 1_555 O ? I HOH . ? X HOH 839 ? 1_555 92.7 ? 2 NE2 ? A HIS 28 ? X HIS 257 ? 1_555 NI ? F NI . ? X NI 705 ? 1_555 O ? I HOH . ? X HOH 805 ? 1_555 85.4 ? 3 O ? I HOH . ? X HOH 839 ? 1_555 NI ? F NI . ? X NI 705 ? 1_555 O ? I HOH . ? X HOH 805 ? 1_555 167.3 ? 4 NE2 ? A HIS 28 ? X HIS 257 ? 1_555 NI ? F NI . ? X NI 705 ? 1_555 O ? I HOH . ? X HOH 827 ? 1_555 96.2 ? 5 O ? I HOH . ? X HOH 839 ? 1_555 NI ? F NI . ? X NI 705 ? 1_555 O ? I HOH . ? X HOH 827 ? 1_555 84.7 ? 6 O ? I HOH . ? X HOH 805 ? 1_555 NI ? F NI . ? X NI 705 ? 1_555 O ? I HOH . ? X HOH 827 ? 1_555 83.0 ? 7 O ? A GLU 172 ? X GLU 401 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD2 ? A ASP 198 ? X ASP 427 ? 1_555 93.1 ? 8 O ? A GLU 172 ? X GLU 401 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD2 ? A ASP 170 ? X ASP 399 ? 1_555 128.2 ? 9 OD2 ? A ASP 198 ? X ASP 427 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD2 ? A ASP 170 ? X ASP 399 ? 1_555 134.7 ? 10 O ? A GLU 172 ? X GLU 401 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASN 199 ? X ASN 428 ? 1_555 93.5 ? 11 OD2 ? A ASP 198 ? X ASP 427 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASN 199 ? X ASN 428 ? 1_555 83.1 ? 12 OD2 ? A ASP 170 ? X ASP 399 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASN 199 ? X ASN 428 ? 1_555 108.4 ? 13 O ? A GLU 172 ? X GLU 401 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD2 ? A ASP 261 ? X ASP 490 ? 1_555 83.0 ? 14 OD2 ? A ASP 198 ? X ASP 427 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD2 ? A ASP 261 ? X ASP 490 ? 1_555 91.4 ? 15 OD2 ? A ASP 170 ? X ASP 399 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD2 ? A ASP 261 ? X ASP 490 ? 1_555 78.1 ? 16 OD1 ? A ASN 199 ? X ASN 428 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD2 ? A ASP 261 ? X ASP 490 ? 1_555 173.4 ? 17 O ? A GLU 172 ? X GLU 401 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 198 ? X ASP 427 ? 1_555 146.4 ? 18 OD2 ? A ASP 198 ? X ASP 427 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 198 ? X ASP 427 ? 1_555 53.6 ? 19 OD2 ? A ASP 170 ? X ASP 399 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 198 ? X ASP 427 ? 1_555 84.8 ? 20 OD1 ? A ASN 199 ? X ASN 428 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 198 ? X ASP 427 ? 1_555 79.4 ? 21 OD2 ? A ASP 261 ? X ASP 490 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 198 ? X ASP 427 ? 1_555 100.4 ? 22 O ? A GLU 172 ? X GLU 401 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 170 ? X ASP 399 ? 1_555 83.3 ? 23 OD2 ? A ASP 198 ? X ASP 427 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 170 ? X ASP 399 ? 1_555 166.6 ? 24 OD2 ? A ASP 170 ? X ASP 399 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 170 ? X ASP 399 ? 1_555 54.4 ? 25 OD1 ? A ASN 199 ? X ASN 428 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 170 ? X ASP 399 ? 1_555 84.2 ? 26 OD2 ? A ASP 261 ? X ASP 490 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 170 ? X ASP 399 ? 1_555 100.9 ? 27 OD1 ? A ASP 198 ? X ASP 427 ? 1_555 CD ? C CD . ? X CD 702 ? 1_555 OD1 ? A ASP 170 ? X ASP 399 ? 1_555 127.8 ? 28 O ? I HOH . ? X HOH 811 ? 1_555 MG ? H MG . ? X MG 707 ? 1_555 O ? I HOH . ? X HOH 809 ? 1_555 124.0 ? 29 O ? A ASN 234 ? X ASN 463 ? 1_555 NA ? G NA . ? X NA 706 ? 1_555 O ? A ASP 198 ? X ASP 427 ? 1_555 129.6 ? 30 O ? A ASN 234 ? X ASN 463 ? 1_555 NA ? G NA . ? X NA 706 ? 1_555 OD1 ? A ASN 201 ? X ASN 430 ? 1_555 92.9 ? 31 O ? A ASP 198 ? X ASP 427 ? 1_555 NA ? G NA . ? X NA 706 ? 1_555 OD1 ? A ASN 201 ? X ASN 430 ? 1_555 63.9 ? # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2012-12-26 2 'Structure model' 1 1 2016-04-13 # loop_ _pdbx_audit_revision_details.ordinal _pdbx_audit_revision_details.revision_ordinal _pdbx_audit_revision_details.data_content_type _pdbx_audit_revision_details.provider _pdbx_audit_revision_details.type _pdbx_audit_revision_details.description 1 1 'Structure model' repository 'Initial release' ? 2 2 'Structure model' repository Obsolete ? # _pdbx_audit_revision_group.ordinal 1 _pdbx_audit_revision_group.revision_ordinal 2 _pdbx_audit_revision_group.data_content_type 'Structure model' _pdbx_audit_revision_group.group Other # loop_ _pdbx_refine_tls.pdbx_refine_id _pdbx_refine_tls.id _pdbx_refine_tls.details _pdbx_refine_tls.method _pdbx_refine_tls.origin_x _pdbx_refine_tls.origin_y _pdbx_refine_tls.origin_z _pdbx_refine_tls.T[1][1] _pdbx_refine_tls.T[2][2] _pdbx_refine_tls.T[3][3] _pdbx_refine_tls.T[1][2] _pdbx_refine_tls.T[1][3] _pdbx_refine_tls.T[2][3] _pdbx_refine_tls.L[1][1] _pdbx_refine_tls.L[2][2] _pdbx_refine_tls.L[3][3] _pdbx_refine_tls.L[1][2] _pdbx_refine_tls.L[1][3] _pdbx_refine_tls.L[2][3] _pdbx_refine_tls.S[1][1] _pdbx_refine_tls.S[2][2] _pdbx_refine_tls.S[3][3] _pdbx_refine_tls.S[1][2] _pdbx_refine_tls.S[1][3] _pdbx_refine_tls.S[2][3] _pdbx_refine_tls.S[2][1] _pdbx_refine_tls.S[3][1] _pdbx_refine_tls.S[3][2] 'X-RAY DIFFRACTION' 1 ? refined 5.4058 2.5290 37.9554 0.0845 0.0484 0.0419 0.0253 -0.0068 0.0019 0.6912 0.3317 2.6958 0.3098 -1.0429 -0.6225 0.0158 -0.0528 0.0369 -0.0460 0.0041 -0.0165 -0.0832 0.2126 0.2159 'X-RAY DIFFRACTION' 2 ? refined -23.3584 -2.4550 79.8577 0.0220 0.0613 0.0834 -0.0026 -0.0168 -0.0050 0.5127 0.3835 0.8193 0.1746 -0.2690 -0.2590 -0.0118 0.0108 0.0010 -0.0891 -0.0059 0.0683 -0.0224 0.0308 -0.0630 'X-RAY DIFFRACTION' 3 ? refined -45.4515 3.8012 106.7697 0.0214 0.3063 0.1301 0.0551 0.0226 -0.0434 3.1730 0.9095 0.9481 -1.3962 -0.8284 0.5986 -0.1167 0.0850 0.0317 -0.3955 0.2227 0.0700 0.0895 0.0370 -0.1131 # loop_ _pdbx_refine_tls_group.pdbx_refine_id _pdbx_refine_tls_group.id _pdbx_refine_tls_group.refine_tls_id _pdbx_refine_tls_group.beg_auth_asym_id _pdbx_refine_tls_group.beg_auth_seq_id _pdbx_refine_tls_group.end_auth_asym_id _pdbx_refine_tls_group.end_auth_seq_id _pdbx_refine_tls_group.selection_details _pdbx_refine_tls_group.beg_label_asym_id _pdbx_refine_tls_group.beg_label_seq_id _pdbx_refine_tls_group.end_label_asym_id _pdbx_refine_tls_group.end_label_seq_id _pdbx_refine_tls_group.selection 'X-RAY DIFFRACTION' 1 1 X 245 X 398 ? . . . . ? 'X-RAY DIFFRACTION' 2 2 X 399 X 523 ? . . . . ? 'X-RAY DIFFRACTION' 3 3 X 524 X 603 ? . . . . ? # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 REFMAC5 5.5.0109 ? program 'Garib N. Murshudov' garib@ysbl.york.ac.uk refinement http://www.ccp4.ac.uk/dist/html/refmac5.html Fortran_77 ? 2 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 3 REFMAC 5.5.0109 ? ? ? ? refinement ? ? ? # _pdbx_entry_details.entry_id 4I8E _pdbx_entry_details.nonpolymer_details ;IN THE ORIGINAL COORDINATES (3QD1), THE OCCUPANCY OF THE DISACCHARIDE WAS SET TO 0.15. WHILE THIS ELECTRON DENSITY ONLY APPEARED IN THIS LOCATION WHEN GSPB WAS CRYSTALLIZED IN THE PRESENCE OF THIS GLYCAN, THE PDB HAS BEEN MODIFIED (4I8E) WITH THE OCCUPANCY SET TO 0.0 SINCE WE WERE UNABLE TO MODEL THE GLYCAN TO PERFECTLY FIT THE DENSITY. THE PRECISE LOCATION WAS NOT PINPOINTED AND CLOSE CONTACTS WERE OBSERVED. HOWEVER, THIS LOCATION WAS PROVEN FUNCTIONALLY IMPORTANT THROUGH MULTIPLE IN VITRO AND IN VIVO EXPERIMENTS. WE THEREFORE BELIEVE THAT IT IS IMPORTANT TO INDICATE THE LOCATION OF THE DISACCHARIDE AND ITS INTERACTIONS WITH GSPB. ; _pdbx_entry_details.sequence_details ? _pdbx_entry_details.compound_details ? _pdbx_entry_details.source_details ? # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 HIS X 257 ? ? -165.98 115.88 2 1 ASP X 262 ? ? -146.13 20.61 3 1 LYS X 290 ? ? 57.81 -142.52 4 1 ASN X 322 ? ? 169.45 140.37 5 1 SER X 323 ? ? 153.03 88.11 6 1 ALA X 326 ? ? 93.50 -54.14 7 1 THR X 381 ? ? -117.58 -94.65 8 1 ASN X 430 ? ? 57.51 18.72 9 1 PHE X 597 ? ? -150.86 1.47 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 X GLY 230 ? A GLY 1 2 1 Y 1 X ILE 231 ? A ILE 2 3 1 Y 1 X PRO 232 ? A PRO 3 4 1 Y 1 X GLU 233 ? A GLU 4 5 1 Y 1 X ALA 234 ? A ALA 5 6 1 Y 1 X SER 235 ? A SER 6 7 1 Y 1 X SER 236 ? A SER 7 8 1 Y 1 X GLN 237 ? A GLN 8 9 1 Y 1 X THR 238 ? A THR 9 10 1 Y 1 X GLY 239 ? A GLY 10 11 1 Y 1 X ARG 240 ? A ARG 11 12 1 Y 1 X ARG 241 ? A ARG 12 13 1 Y 1 X ARG 242 ? A ARG 13 14 1 Y 1 X THR 243 ? A THR 14 15 1 Y 1 X ARG 244 ? A ARG 15 16 1 Y 1 X SER 604 ? A SER 375 17 1 Y 1 X ILE 605 ? A ILE 376 18 1 Y 1 X SER 606 ? A SER 377 19 1 Y 1 X LYS 607 ? A LYS 378 20 1 Y 1 X SER 608 ? A SER 379 21 1 Y 1 X GLN 609 ? A GLN 380 22 1 Y 1 X SER 610 ? A SER 381 23 1 Y 1 X THR 611 ? A THR 382 24 1 Y 1 X SER 612 ? A SER 383 25 1 Y 1 X ASN 613 ? A ASN 384 26 1 Y 1 X SER 614 ? A SER 385 27 1 Y 1 X ILE 615 ? A ILE 386 28 1 Y 1 X SER 616 ? A SER 387 29 1 Y 1 X VAL 617 ? A VAL 388 30 1 Y 1 X ASN 618 ? A ASN 389 31 1 Y 1 X SER 619 ? A SER 390 32 1 Y 1 X SER 620 ? A SER 391 33 1 N 0 X RMY 704 ? E RMY ? # loop_ _pdbx_entity_nonpoly.entity_id _pdbx_entity_nonpoly.name _pdbx_entity_nonpoly.comp_id 2 GLYCEROL GOL 3 'CADMIUM ION' CD 4 'ethyl 3-O-[5-(acetylamino)-3,5-dideoxy-D-glycero-alpha-D-galacto-non-2-ulopyranonosyl]-1-thio-beta-D-galactopyranoside' RMY 5 'NICKEL (II) ION' NI 6 'SODIUM ION' NA 7 'MAGNESIUM ION' MG 8 water HOH #