HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 03-DEC-12 4I8I TITLE CRYSTAL STRUCTURE OF A DUF4886 FAMILY PROTEIN (BACUNI_01406) FROM TITLE 2 BACTEROIDES UNIFORMIS ATCC 8492 AT 1.50 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: HYPOTHETICAL PROTEIN; COMPND 3 CHAIN: A; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES UNIFORMIS; SOURCE 3 ORGANISM_TAXID: 411479; SOURCE 4 STRAIN: ATCC 8492; SOURCE 5 GENE: ZP_02069989.1; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS 5-STRANDED BETA SHEET FLANKED BY 8 HELICES FOLD, STRUCTURAL GENOMICS, KEYWDS 2 JOINT CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE KEYWDS 3 INITIATIVE, PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 01-FEB-23 4I8I 1 REMARK SEQADV LINK REVDAT 4 24-JAN-18 4I8I 1 JRNL REVDAT 3 15-NOV-17 4I8I 1 REMARK REVDAT 2 24-DEC-14 4I8I 1 TITLE REVDAT 1 16-JAN-13 4I8I 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BACUNI_01406) JRNL TITL 2 FROM BACTEROIDES UNIFORMIS ATCC 8492 AT 1.50 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.50 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.50 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 28.22 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 99.7 REMARK 3 NUMBER OF REFLECTIONS : 41708 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.152 REMARK 3 R VALUE (WORKING SET) : 0.151 REMARK 3 FREE R VALUE : 0.176 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.000 REMARK 3 FREE R VALUE TEST SET COUNT : 2101 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.50 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.54 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2864 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.80 REMARK 3 BIN R VALUE (WORKING SET) : 0.2420 REMARK 3 BIN FREE R VALUE SET COUNT : 158 REMARK 3 BIN FREE R VALUE : 0.2780 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2034 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 8 REMARK 3 SOLVENT ATOMS : 370 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : NULL REMARK 3 MEAN B VALUE (OVERALL, A**2) : 16.81 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : 0.43000 REMARK 3 B22 (A**2) : -0.33000 REMARK 3 B33 (A**2) : -0.10000 REMARK 3 B12 (A**2) : 0.00000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.069 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.069 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.042 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 2.249 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.961 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2263 ; 0.013 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2179 ; 0.001 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3103 ; 1.570 ; 1.969 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5045 ; 0.841 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 309 ; 6.066 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 108 ;38.826 ;24.907 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 378 ;12.494 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 12 ;17.242 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 347 ; 0.098 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2643 ; 0.008 ; 0.020 REMARK 3 GENERAL PLANES OTHERS (A): 523 ; 0.002 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1099 ; 1.505 ; 1.691 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1096 ; 1.478 ; 1.678 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1386 ; 2.180 ; 3.132 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 1 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 30 A 288 REMARK 3 ORIGIN FOR THE GROUP (A): 21.3020 28.4870 27.9910 REMARK 3 T TENSOR REMARK 3 T11: 0.0240 T22: 0.0052 REMARK 3 T33: 0.0625 T12: -0.0093 REMARK 3 T13: -0.0015 T23: -0.0062 REMARK 3 L TENSOR REMARK 3 L11: 0.2786 L22: 0.6700 REMARK 3 L33: 0.4405 L12: -0.1633 REMARK 3 L13: -0.0088 L23: -0.1429 REMARK 3 S TENSOR REMARK 3 S11: -0.0207 S12: -0.0001 S13: 0.0099 REMARK 3 S21: 0.0251 S22: -0.0013 S23: 0.0300 REMARK 3 S31: -0.0002 S32: 0.0104 S33: 0.0220 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1. HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2. ATOM RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL B FACTORS. 3. ANISOU RECORD CONTAINS SUM OF TLS AND REMARK 3 RESIDUAL U FACTORS. 4. WATERS WERE EXCLUDED FROM AUTOMATIC TLS REMARK 3 ASSIGNMENT. 5. A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 6. ACETATE (ACT) IONS FROM THE CRYSTALLIZATION REMARK 3 SOLUTION ARE MODELED. REMARK 4 REMARK 4 4I8I COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 12-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076437. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 18-OCT-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : ALS REMARK 200 BEAMLINE : 8.2.2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.918401,0.979263,0.979485 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : KOHZU: DOUBLE CRYSTAL SI(111) REMARK 200 REMARK 200 DETECTOR TYPE : CCD REMARK 200 DETECTOR MANUFACTURER : ADSC QUANTUM 315 REMARK 200 INTENSITY-INTEGRATION SOFTWARE : MOSFLM REMARK 200 DATA SCALING SOFTWARE : SCALA 3.3.20 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 41834 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.500 REMARK 200 RESOLUTION RANGE LOW (A) : 28.222 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : NULL REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : 7.100 REMARK 200 R MERGE (I) : NULL REMARK 200 R SYM (I) : 0.12100 REMARK 200 FOR THE DATA SET : 10.8000 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.50 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.54 REMARK 200 COMPLETENESS FOR SHELL (%) : 99.9 REMARK 200 DATA REDUNDANCY IN SHELL : 7.10 REMARK 200 R MERGE FOR SHELL (I) : 0.94500 REMARK 200 R SYM FOR SHELL (I) : 0.94500 REMARK 200 FOR SHELL : 0.800 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: MAD REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: MAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 41.55 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.10 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 0.2M CALCIUM ACETATE, 20.0% REMARK 280 POLYETHYLENE GLYCOL 8000, 0.1M MES PH 6.0, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: I 2 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -X,-Y,Z REMARK 290 3555 -X,Y,-Z REMARK 290 4555 X,-Y,-Z REMARK 290 5555 X+1/2,Y+1/2,Z+1/2 REMARK 290 6555 -X+1/2,-Y+1/2,Z+1/2 REMARK 290 7555 -X+1/2,Y+1/2,-Z+1/2 REMARK 290 8555 X+1/2,-Y+1/2,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 2 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 3 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 4 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 5 1.000000 0.000000 0.000000 34.84750 REMARK 290 SMTRY2 5 0.000000 1.000000 0.000000 41.21600 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 45.05650 REMARK 290 SMTRY1 6 -1.000000 0.000000 0.000000 34.84750 REMARK 290 SMTRY2 6 0.000000 -1.000000 0.000000 41.21600 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 45.05650 REMARK 290 SMTRY1 7 -1.000000 0.000000 0.000000 34.84750 REMARK 290 SMTRY2 7 0.000000 1.000000 0.000000 41.21600 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 45.05650 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 34.84750 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 41.21600 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 45.05650 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 300 REMARK: CRYSTAL PACKING ANALYSIS SUGGESTS THE ASSIGNMENT OF A REMARK 300 MONOMER AS THE SIGNIFICANT OLIGOMERIZATION STATE. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: MONOMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: MONOMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 APPLY THE FOLLOWING TO CHAINS: A REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 375 REMARK 375 SPECIAL POSITION REMARK 375 THE FOLLOWING ATOMS ARE FOUND TO BE WITHIN 0.15 ANGSTROMS REMARK 375 OF A SYMMETRY RELATED ATOM AND ARE ASSUMED TO BE ON SPECIAL REMARK 375 POSITIONS. REMARK 375 REMARK 375 ATOM RES CSSEQI REMARK 375 HOH A 518 LIES ON A SPECIAL POSITION. REMARK 375 HOH A 742 LIES ON A SPECIAL POSITION. REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 ASN A 23 REMARK 465 GLY A 24 REMARK 465 CYS A 25 REMARK 465 HIS A 26 REMARK 465 ALA A 27 REMARK 465 ASN A 28 REMARK 465 ASN A 29 REMARK 465 LYS A 289 REMARK 465 ILE A 290 REMARK 465 ALA A 291 REMARK 465 ASP A 292 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ASP A 30 CG OD1 OD2 REMARK 470 LYS A 94 CG CD CE NZ REMARK 470 LYS A 114 CD CE NZ REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 ASN A 39 -160.27 -175.75 REMARK 500 TYR A 49 -43.27 71.83 REMARK 500 ASP A 223 25.32 -154.33 REMARK 500 TYR A 225 -52.20 -136.60 REMARK 500 THR A 230 -83.25 -104.44 REMARK 500 REMARK 500 REMARK: NULL REMARK 800 REMARK 800 SITE REMARK 800 SITE_IDENTIFIER: AC1 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 300 REMARK 800 REMARK 800 SITE_IDENTIFIER: AC2 REMARK 800 EVIDENCE_CODE: SOFTWARE REMARK 800 SITE_DESCRIPTION: BINDING SITE FOR RESIDUE ACT A 301 REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-418030 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT WAS EXPRESSED WITH A PURIFICATION TAG REMARK 999 MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE LEAVING REMARK 999 ONLY A GLYCINE (0) FOLLOWED BY RESIDUES 23-292 OF THE TARGET REMARK 999 SEQUENCE. DBREF 4I8I A 23 292 UNP A7V1G8 A7V1G8_BACUN 23 292 SEQADV 4I8I GLY A 0 UNP A7V1G8 EXPRESSION TAG SEQRES 1 A 271 GLY ASN GLY CYS HIS ALA ASN ASN ASP THR ILE LYS VAL SEQRES 2 A 271 LEU ALA ILE GLY ASN SER PHE SER GLN ASP ALA VAL GLU SEQRES 3 A 271 GLN TYR LEU HIS GLU LEU GLY GLU ALA GLU GLY ILE THR SEQRES 4 A 271 MSE ILE ILE GLY ASN MSE PHE ILE GLY GLY CYS SER LEU SEQRES 5 A 271 GLU ARG HIS VAL GLN ASN ILE ARG ASN ASN ALA PRO ALA SEQRES 6 A 271 TYR ALA TYR ARG LYS VAL GLU LYS ASP GLY GLU LYS THR SEQRES 7 A 271 GLU THR ARG SER MSE THR ILE GLU LYS ALA LEU ALA ASP SEQRES 8 A 271 GLU LYS TRP ASP TYR ILE SER VAL GLN GLN ALA SER PRO SEQRES 9 A 271 LEU SER GLY ILE TYR ASP SER TYR LYS ALA SER LEU PRO SEQRES 10 A 271 GLU LEU VAL ASN TYR ILE ARG GLU ARG ILE GLY LYS GLU SEQRES 11 A 271 THR VAL LEU MSE MSE HIS GLN THR TRP ALA TYR ALA THR SEQRES 12 A 271 ASN ALA ASN HIS THR GLY PHE LYS ASN TYR ASP GLN ASN SEQRES 13 A 271 GLN MSE LYS MSE TYR THR SER ILE VAL ASP ALA VAL LYS SEQRES 14 A 271 LYS ALA ALA ASN LEU VAL GLY ILE LYS LYS ILE ILE PRO SEQRES 15 A 271 SER GLY THR ALA ILE GLN ASN ALA ARG THR SER PHE ILE SEQRES 16 A 271 GLY ASP HIS MSE ASN ARG ASP GLY TYR HIS LEU ASP LEU SEQRES 17 A 271 THR ILE GLY ARG TYR THR ALA ALA CYS THR TRP PHE GLU SEQRES 18 A 271 ALA LEU THR HIS ARG ASN VAL THR GLU ASN PRO TYR SER SEQRES 19 A 271 PRO GLU GLY ILE ASP PRO ILE HIS LYS LYS ALA ALA GLN SEQRES 20 A 271 MSE ALA ALA HIS ASN ALA ILE LEU TYR PRO ASP LYS VAL SEQRES 21 A 271 THR GLU LEU THR GLU LEU LYS LYS ILE ALA ASP MODRES 4I8I MSE A 61 MET SELENOMETHIONINE MODRES 4I8I MSE A 66 MET SELENOMETHIONINE MODRES 4I8I MSE A 104 MET SELENOMETHIONINE MODRES 4I8I MSE A 155 MET SELENOMETHIONINE MODRES 4I8I MSE A 156 MET SELENOMETHIONINE MODRES 4I8I MSE A 179 MET SELENOMETHIONINE MODRES 4I8I MSE A 181 MET SELENOMETHIONINE MODRES 4I8I MSE A 220 MET SELENOMETHIONINE MODRES 4I8I MSE A 269 MET SELENOMETHIONINE HET MSE A 61 16 HET MSE A 66 8 HET MSE A 104 8 HET MSE A 155 13 HET MSE A 156 13 HET MSE A 179 8 HET MSE A 181 8 HET MSE A 220 8 HET MSE A 269 18 HET ACT A 300 4 HET ACT A 301 4 HETNAM MSE SELENOMETHIONINE HETNAM ACT ACETATE ION FORMUL 1 MSE 9(C5 H11 N O2 SE) FORMUL 2 ACT 2(C2 H3 O2 1-) FORMUL 4 HOH *370(H2 O) HELIX 1 1 ASN A 39 GLU A 47 1 9 HELIX 2 2 TYR A 49 ALA A 56 1 8 HELIX 3 3 SER A 72 ASN A 82 1 11 HELIX 4 4 THR A 105 GLU A 113 1 9 HELIX 5 5 ALA A 123 SER A 127 5 5 HELIX 6 6 ILE A 129 GLU A 146 1 18 HELIX 7 7 HIS A 168 ASP A 175 5 8 HELIX 8 8 ASN A 177 GLY A 197 1 21 HELIX 9 9 SER A 204 SER A 214 1 11 HELIX 10 10 THR A 230 HIS A 246 1 17 HELIX 11 11 ASN A 248 ASN A 252 5 5 HELIX 12 12 ASP A 260 TYR A 277 1 18 HELIX 13 13 LEU A 284 LYS A 288 5 5 SHEET 1 A 7 LYS A 98 MSE A 104 0 SHEET 2 A 7 TYR A 87 VAL A 92 -1 N TYR A 89 O THR A 101 SHEET 3 A 7 THR A 60 PHE A 67 -1 N PHE A 67 O ALA A 88 SHEET 4 A 7 THR A 31 GLY A 38 1 N GLY A 38 O MSE A 66 SHEET 5 A 7 TYR A 117 VAL A 120 1 O SER A 119 N LEU A 35 SHEET 6 A 7 VAL A 153 GLN A 158 1 O MSE A 155 N ILE A 118 SHEET 7 A 7 LYS A 200 PRO A 203 1 O ILE A 202 N MSE A 156 LINK C THR A 60 N AMSE A 61 1555 1555 1.31 LINK C THR A 60 N BMSE A 61 1555 1555 1.33 LINK C AMSE A 61 N ILE A 62 1555 1555 1.33 LINK C BMSE A 61 N ILE A 62 1555 1555 1.33 LINK C ASN A 65 N MSE A 66 1555 1555 1.32 LINK C MSE A 66 N PHE A 67 1555 1555 1.33 LINK C SER A 103 N MSE A 104 1555 1555 1.34 LINK C MSE A 104 N THR A 105 1555 1555 1.33 LINK C LEU A 154 N MSE A 155 1555 1555 1.33 LINK C MSE A 155 N MSE A 156 1555 1555 1.33 LINK C MSE A 156 N HIS A 157 1555 1555 1.33 LINK C GLN A 178 N MSE A 179 1555 1555 1.33 LINK C MSE A 179 N LYS A 180 1555 1555 1.33 LINK C LYS A 180 N MSE A 181 1555 1555 1.33 LINK C MSE A 181 N TYR A 182 1555 1555 1.32 LINK C HIS A 219 N MSE A 220 1555 1555 1.33 LINK C MSE A 220 N ASN A 221 1555 1555 1.34 LINK C GLN A 268 N MSE A 269 1555 1555 1.33 LINK C MSE A 269 N ALA A 270 1555 1555 1.33 SITE 1 AC1 6 SER A 40 PHE A 41 ALA A 123 SER A 124 SITE 2 AC1 6 HOH A 418 HOH A 480 SITE 1 AC2 6 TYR A 130 PRO A 253 HOH A 406 HOH A 544 SITE 2 AC2 6 HOH A 590 HOH A 734 CRYST1 69.695 82.432 90.113 90.00 90.00 90.00 I 2 2 2 8 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.014348 0.000000 0.000000 0.00000 SCALE2 0.000000 0.012131 0.000000 0.00000 SCALE3 0.000000 0.000000 0.011097 0.00000