data_4I8T # _entry.id 4I8T # _audit_conform.dict_name mmcif_pdbx.dic _audit_conform.dict_version 5.379 _audit_conform.dict_location http://mmcif.pdb.org/dictionaries/ascii/mmcif_pdbx.dic # loop_ _database_2.database_id _database_2.database_code _database_2.pdbx_database_accession _database_2.pdbx_DOI PDB 4I8T pdb_00004i8t 10.2210/pdb4i8t/pdb NDB NA2152 ? ? RCSB RCSB076448 ? ? WWPDB D_1000076448 ? ? # loop_ _pdbx_database_related.db_name _pdbx_database_related.db_id _pdbx_database_related.details _pdbx_database_related.content_type PDB 4FN3 'S52A Mutant Free Protein' unspecified PDB 4FBI 'R46A Mutant Free Protein' unspecified PDB 4F8D 'R46A Mutant Free Protein' unspecified PDB 3G5G 'Native Free Protein' unspecified PDB 3FYA 'R35A Mutant Free Protein' unspecified PDB 3CLC 'DNA Bound Tetramer' unspecified PDB 3S8Q 'DNA Bound Dimer (OL)' unspecified PDB 3UFD 'DNA Bound Dimer (OM)' unspecified PDB 4I6R 'Native Free Protein (Triclinic)' unspecified PDB 4I6T 'T36A Mutant Free Protein' unspecified PDB 4I6U 'Y37F Mutant Free Protein' unspecified # _pdbx_database_status.entry_id 4I8T _pdbx_database_status.status_code REL _pdbx_database_status.deposit_site RCSB _pdbx_database_status.process_site RCSB _pdbx_database_status.recvd_initial_deposition_date 2012-12-04 _pdbx_database_status.status_code_sf REL _pdbx_database_status.status_code_mr ? _pdbx_database_status.SG_entry ? _pdbx_database_status.status_code_cs ? _pdbx_database_status.methods_development_category ? _pdbx_database_status.pdb_format_compatible Y _pdbx_database_status.status_code_nmr_data ? # loop_ _audit_author.name _audit_author.pdbx_ordinal 'Martin, R.N.A.' 1 'McGeehan, J.E.' 2 'Kneale, G.G.' 3 # loop_ _citation.id _citation.title _citation.journal_abbrev _citation.journal_volume _citation.page_first _citation.page_last _citation.year _citation.journal_id_ASTM _citation.country _citation.journal_id_ISSN _citation.journal_id_CSD _citation.book_publisher _citation.pdbx_database_id_PubMed _citation.pdbx_database_id_DOI primary 'Structural analysis of DNA-protein complexes regulating the restriction-modification system Esp1396I.' 'Acta Crystallogr.,Sect.F' 69 962 966 2013 ? DK 1744-3091 ? ? 23989141 10.1107/S174430911302126X 1 'Structure of the restriction-modification controller protein C.Esp1396I.' 'Acta Crystallogr.,Sect.D' 65 900 905 2009 ABCRE6 DK 0907-4449 0766 ? 19690367 10.1107/S0907444909020514 2 'Recognition of dual symmetry by the controller protein C.Esp1396I based on the structure of the transcriptional activation complex.' 'Nucleic Acids Res.' 40 4158 4167 2012 NARHAD UK 0305-1048 0389 ? 22210861 10.1093/nar/gkr1250 3 'The structural basis of differential DNA sequence recognition by restriction-modification controller proteins.' 'Nucleic Acids Res.' 40 10532 10542 2012 NARHAD UK 0305-1048 0389 ? 22941636 10.1093/nar/gks718 4 'Structure of the restriction-modification controller protein C.Esp1396I.' 'Acta Crystallogr.,Sect.D' 65 900 905 2009 ABCRE6 DK 0907-4449 0766 ? 19690367 10.1107/S0907444909020514 # loop_ _citation_author.citation_id _citation_author.name _citation_author.ordinal _citation_author.identifier_ORCID primary 'Martin, R.N.' 1 ? primary 'McGeehan, J.E.' 2 ? primary 'Ball, N.J.' 3 ? primary 'Streeter, S.D.' 4 ? primary 'Thresh, S.J.' 5 ? primary 'Kneale, G.G.' 6 ? 1 'Ball, N.' 7 ? 1 'Streeter, S.D.' 8 ? 1 'Kneale, G.G.' 9 ? 1 'McGeehan, J.E.' 10 ? 2 'McGeehan, J.E.' 11 ? 2 'Ball, N.J.' 12 ? 2 'Streeter, S.D.' 13 ? 2 'Thresh, S.J.' 14 ? 2 'Kneale, G.G.' 15 ? 3 'Ball, N.J.' 16 ? 3 'McGeehan, J.E.' 17 ? 3 'Streeter, S.D.' 18 ? 3 'Thresh, S.J.' 19 ? 3 'Kneale, G.G.' 20 ? 4 'Ball, N.' 21 ? 4 'Streeter, S.D.' 22 ? 4 'Kneale, G.G.' 23 ? 4 'McGeehan, J.E.' 24 ? # _cell.entry_id 4I8T _cell.length_a 75.510 _cell.length_b 60.860 _cell.length_c 80.350 _cell.angle_alpha 90.00 _cell.angle_beta 113.47 _cell.angle_gamma 90.00 _cell.Z_PDB 8 _cell.pdbx_unique_axis ? _cell.length_a_esd ? _cell.length_b_esd ? _cell.length_c_esd ? _cell.angle_alpha_esd ? _cell.angle_beta_esd ? _cell.angle_gamma_esd ? # _symmetry.entry_id 4I8T _symmetry.space_group_name_H-M 'C 1 2 1' _symmetry.pdbx_full_space_group_name_H-M ? _symmetry.cell_setting ? _symmetry.Int_Tables_number 5 _symmetry.space_group_name_Hall ? # loop_ _entity.id _entity.type _entity.src_method _entity.pdbx_description _entity.formula_weight _entity.pdbx_number_of_molecules _entity.pdbx_ec _entity.pdbx_mutation _entity.pdbx_fragment _entity.details 1 polymer man 'Regulatory protein' 9521.175 2 ? ? ? ? 2 polymer syn ;DNA (5'-D(P*TP*GP*TP*TP*GP*AP*CP*TP*AP*TP*AP*AP*TP*CP*AP*CP*AP*CP*A)-3') ; 5787.785 1 ? ? ? ? 3 polymer syn ;DNA (5'-D(P*TP*GP*TP*GP*TP*GP*AP*TP*TP*AP*TP*AP*GP*TP*CP*AP*AP*CP*A)-3') ; 5858.820 1 ? ? ? ? # loop_ _entity_poly.entity_id _entity_poly.type _entity_poly.nstd_linkage _entity_poly.nstd_monomer _entity_poly.pdbx_seq_one_letter_code _entity_poly.pdbx_seq_one_letter_code_can _entity_poly.pdbx_strand_id _entity_poly.pdbx_target_identifier 1 'polypeptide(L)' no no ;GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD ; ;GSHMESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILK HD ; A,B ? 2 polydeoxyribonucleotide no no '(DT)(DG)(DT)(DT)(DG)(DA)(DC)(DT)(DA)(DT)(DA)(DA)(DT)(DC)(DA)(DC)(DA)(DC)(DA)' TGTTGACTATAATCACACA C ? 3 polydeoxyribonucleotide no no '(DT)(DG)(DT)(DG)(DT)(DG)(DA)(DT)(DT)(DA)(DT)(DA)(DG)(DT)(DC)(DA)(DA)(DC)(DA)' TGTGTGATTATAGTCAACA D ? # loop_ _entity_poly_seq.entity_id _entity_poly_seq.num _entity_poly_seq.mon_id _entity_poly_seq.hetero 1 1 GLY n 1 2 SER n 1 3 HIS n 1 4 MET n 1 5 GLU n 1 6 SER n 1 7 PHE n 1 8 LEU n 1 9 LEU n 1 10 SER n 1 11 LYS n 1 12 VAL n 1 13 SER n 1 14 PHE n 1 15 VAL n 1 16 ILE n 1 17 LYS n 1 18 LYS n 1 19 ILE n 1 20 ARG n 1 21 LEU n 1 22 GLU n 1 23 LYS n 1 24 GLY n 1 25 MET n 1 26 THR n 1 27 GLN n 1 28 GLU n 1 29 ASP n 1 30 LEU n 1 31 ALA n 1 32 TYR n 1 33 LYS n 1 34 SER n 1 35 ASN n 1 36 LEU n 1 37 ASP n 1 38 ARG n 1 39 THR n 1 40 TYR n 1 41 ILE n 1 42 SER n 1 43 GLY n 1 44 ILE n 1 45 GLU n 1 46 ARG n 1 47 ASN n 1 48 SER n 1 49 ARG n 1 50 ASN n 1 51 LEU n 1 52 THR n 1 53 ILE n 1 54 LYS n 1 55 SER n 1 56 LEU n 1 57 GLU n 1 58 LEU n 1 59 ILE n 1 60 MET n 1 61 LYS n 1 62 GLY n 1 63 LEU n 1 64 GLU n 1 65 VAL n 1 66 SER n 1 67 ASP n 1 68 VAL n 1 69 VAL n 1 70 PHE n 1 71 PHE n 1 72 GLU n 1 73 MET n 1 74 LEU n 1 75 ILE n 1 76 LYS n 1 77 GLU n 1 78 ILE n 1 79 LEU n 1 80 LYS n 1 81 HIS n 1 82 ASP n 2 1 DT n 2 2 DG n 2 3 DT n 2 4 DT n 2 5 DG n 2 6 DA n 2 7 DC n 2 8 DT n 2 9 DA n 2 10 DT n 2 11 DA n 2 12 DA n 2 13 DT n 2 14 DC n 2 15 DA n 2 16 DC n 2 17 DA n 2 18 DC n 2 19 DA n 3 1 DT n 3 2 DG n 3 3 DT n 3 4 DG n 3 5 DT n 3 6 DG n 3 7 DA n 3 8 DT n 3 9 DT n 3 10 DA n 3 11 DT n 3 12 DA n 3 13 DG n 3 14 DT n 3 15 DC n 3 16 DA n 3 17 DA n 3 18 DC n 3 19 DA n # _entity_src_gen.entity_id 1 _entity_src_gen.pdbx_src_id 1 _entity_src_gen.pdbx_alt_source_flag sample _entity_src_gen.pdbx_seq_type ? _entity_src_gen.pdbx_beg_seq_num ? _entity_src_gen.pdbx_end_seq_num ? _entity_src_gen.gene_src_common_name ? _entity_src_gen.gene_src_genus ? _entity_src_gen.pdbx_gene_src_gene esp1396IC _entity_src_gen.gene_src_species ? _entity_src_gen.gene_src_strain RFL1396 _entity_src_gen.gene_src_tissue ? _entity_src_gen.gene_src_tissue_fraction ? _entity_src_gen.gene_src_details ? _entity_src_gen.pdbx_gene_src_fragment ? _entity_src_gen.pdbx_gene_src_scientific_name 'Enterobacter sp.' _entity_src_gen.pdbx_gene_src_ncbi_taxonomy_id 211595 _entity_src_gen.pdbx_gene_src_variant ? _entity_src_gen.pdbx_gene_src_cell_line ? _entity_src_gen.pdbx_gene_src_atcc ? _entity_src_gen.pdbx_gene_src_organ ? _entity_src_gen.pdbx_gene_src_organelle ? _entity_src_gen.pdbx_gene_src_cell ? _entity_src_gen.pdbx_gene_src_cellular_location ? _entity_src_gen.host_org_common_name ? _entity_src_gen.pdbx_host_org_scientific_name 'Escherichia coli' _entity_src_gen.pdbx_host_org_ncbi_taxonomy_id 469008 _entity_src_gen.host_org_genus ? _entity_src_gen.pdbx_host_org_gene ? _entity_src_gen.pdbx_host_org_organ ? _entity_src_gen.host_org_species ? _entity_src_gen.pdbx_host_org_tissue ? _entity_src_gen.pdbx_host_org_tissue_fraction ? _entity_src_gen.pdbx_host_org_strain 'BL21(DE3)pLysS' _entity_src_gen.pdbx_host_org_variant ? _entity_src_gen.pdbx_host_org_cell_line ? _entity_src_gen.pdbx_host_org_atcc ? _entity_src_gen.pdbx_host_org_culture_collection ? _entity_src_gen.pdbx_host_org_cell ? _entity_src_gen.pdbx_host_org_organelle ? _entity_src_gen.pdbx_host_org_cellular_location ? _entity_src_gen.pdbx_host_org_vector_type Plasmid _entity_src_gen.pdbx_host_org_vector ? _entity_src_gen.host_org_details ? _entity_src_gen.expression_system_id ? _entity_src_gen.plasmid_name pET28 _entity_src_gen.plasmid_details ? _entity_src_gen.pdbx_description ? # loop_ _pdbx_entity_src_syn.entity_id _pdbx_entity_src_syn.pdbx_src_id _pdbx_entity_src_syn.pdbx_alt_source_flag _pdbx_entity_src_syn.pdbx_beg_seq_num _pdbx_entity_src_syn.pdbx_end_seq_num _pdbx_entity_src_syn.organism_scientific _pdbx_entity_src_syn.organism_common_name _pdbx_entity_src_syn.ncbi_taxonomy_id _pdbx_entity_src_syn.details 2 1 sample ? ? ? ? ? 'Synthesised DNA Oligonucleotide' 3 1 sample ? ? ? ? ? 'Synthesised DNA Oligonucleotide' # loop_ _struct_ref.id _struct_ref.db_name _struct_ref.db_code _struct_ref.pdbx_db_accession _struct_ref.entity_id _struct_ref.pdbx_seq_one_letter_code _struct_ref.pdbx_align_begin _struct_ref.pdbx_db_isoform 1 UNP Q8GGH0_9ENTR Q8GGH0 1 MESFLLSKVSFVIKKIRLEKGMTQEDLAYKSNLDRTYISGIERNSRNLTIKSLELIMKGLEVSDVVFFEMLIKEILKHD 1 ? 2 PDB 4I8T 4I8T 2 ? ? ? 3 PDB 4I8T 4I8T 3 ? ? ? # loop_ _struct_ref_seq.align_id _struct_ref_seq.ref_id _struct_ref_seq.pdbx_PDB_id_code _struct_ref_seq.pdbx_strand_id _struct_ref_seq.seq_align_beg _struct_ref_seq.pdbx_seq_align_beg_ins_code _struct_ref_seq.seq_align_end _struct_ref_seq.pdbx_seq_align_end_ins_code _struct_ref_seq.pdbx_db_accession _struct_ref_seq.db_align_beg _struct_ref_seq.pdbx_db_align_beg_ins_code _struct_ref_seq.db_align_end _struct_ref_seq.pdbx_db_align_end_ins_code _struct_ref_seq.pdbx_auth_seq_align_beg _struct_ref_seq.pdbx_auth_seq_align_end 1 1 4I8T A 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 2 1 4I8T B 4 ? 82 ? Q8GGH0 1 ? 79 ? 1 79 3 2 4I8T C 1 ? 19 ? 4I8T 1 ? 19 ? 1 19 4 3 4I8T D 1 ? 19 ? 4I8T 1 ? 19 ? 1 19 # loop_ _struct_ref_seq_dif.align_id _struct_ref_seq_dif.pdbx_pdb_id_code _struct_ref_seq_dif.mon_id _struct_ref_seq_dif.pdbx_pdb_strand_id _struct_ref_seq_dif.seq_num _struct_ref_seq_dif.pdbx_pdb_ins_code _struct_ref_seq_dif.pdbx_seq_db_name _struct_ref_seq_dif.pdbx_seq_db_accession_code _struct_ref_seq_dif.db_mon_id _struct_ref_seq_dif.pdbx_seq_db_seq_num _struct_ref_seq_dif.details _struct_ref_seq_dif.pdbx_auth_seq_num _struct_ref_seq_dif.pdbx_ordinal 1 4I8T GLY A 1 ? UNP Q8GGH0 ? ? 'expression tag' -2 1 1 4I8T SER A 2 ? UNP Q8GGH0 ? ? 'expression tag' -1 2 1 4I8T HIS A 3 ? UNP Q8GGH0 ? ? 'expression tag' 0 3 2 4I8T GLY B 1 ? UNP Q8GGH0 ? ? 'expression tag' -2 4 2 4I8T SER B 2 ? UNP Q8GGH0 ? ? 'expression tag' -1 5 2 4I8T HIS B 3 ? UNP Q8GGH0 ? ? 'expression tag' 0 6 # loop_ _chem_comp.id _chem_comp.type _chem_comp.mon_nstd_flag _chem_comp.name _chem_comp.pdbx_synonyms _chem_comp.formula _chem_comp.formula_weight ALA 'L-peptide linking' y ALANINE ? 'C3 H7 N O2' 89.093 ARG 'L-peptide linking' y ARGININE ? 'C6 H15 N4 O2 1' 175.209 ASN 'L-peptide linking' y ASPARAGINE ? 'C4 H8 N2 O3' 132.118 ASP 'L-peptide linking' y 'ASPARTIC ACID' ? 'C4 H7 N O4' 133.103 DA 'DNA linking' y "2'-DEOXYADENOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O6 P' 331.222 DC 'DNA linking' y "2'-DEOXYCYTIDINE-5'-MONOPHOSPHATE" ? 'C9 H14 N3 O7 P' 307.197 DG 'DNA linking' y "2'-DEOXYGUANOSINE-5'-MONOPHOSPHATE" ? 'C10 H14 N5 O7 P' 347.221 DT 'DNA linking' y "THYMIDINE-5'-MONOPHOSPHATE" ? 'C10 H15 N2 O8 P' 322.208 GLN 'L-peptide linking' y GLUTAMINE ? 'C5 H10 N2 O3' 146.144 GLU 'L-peptide linking' y 'GLUTAMIC ACID' ? 'C5 H9 N O4' 147.129 GLY 'peptide linking' y GLYCINE ? 'C2 H5 N O2' 75.067 HIS 'L-peptide linking' y HISTIDINE ? 'C6 H10 N3 O2 1' 156.162 ILE 'L-peptide linking' y ISOLEUCINE ? 'C6 H13 N O2' 131.173 LEU 'L-peptide linking' y LEUCINE ? 'C6 H13 N O2' 131.173 LYS 'L-peptide linking' y LYSINE ? 'C6 H15 N2 O2 1' 147.195 MET 'L-peptide linking' y METHIONINE ? 'C5 H11 N O2 S' 149.211 PHE 'L-peptide linking' y PHENYLALANINE ? 'C9 H11 N O2' 165.189 SER 'L-peptide linking' y SERINE ? 'C3 H7 N O3' 105.093 THR 'L-peptide linking' y THREONINE ? 'C4 H9 N O3' 119.119 TYR 'L-peptide linking' y TYROSINE ? 'C9 H11 N O3' 181.189 VAL 'L-peptide linking' y VALINE ? 'C5 H11 N O2' 117.146 # _exptl.entry_id 4I8T _exptl.method 'X-RAY DIFFRACTION' _exptl.crystals_number 1 # _exptl_crystal.id 1 _exptl_crystal.density_meas ? _exptl_crystal.density_Matthews 2.76 _exptl_crystal.density_percent_sol 55.42 _exptl_crystal.description ? _exptl_crystal.F_000 ? _exptl_crystal.preparation ? # _exptl_crystal_grow.crystal_id 1 _exptl_crystal_grow.method 'VAPOR DIFFUSION, HANGING DROP' _exptl_crystal_grow.temp 277 _exptl_crystal_grow.temp_details ? _exptl_crystal_grow.pH 5 _exptl_crystal_grow.pdbx_pH_range ? _exptl_crystal_grow.pdbx_details '0.1 M PCTP buffer, 25 % w/v PEG 1500, 10 mM Spermidine, VAPOR DIFFUSION, HANGING DROP, temperature 277K' # _diffrn.id 1 _diffrn.ambient_temp 100 _diffrn.ambient_temp_details ? _diffrn.crystal_id 1 # _diffrn_detector.diffrn_id 1 _diffrn_detector.detector CCD _diffrn_detector.type 'ADSC QUANTUM 315r' _diffrn_detector.pdbx_collection_date 2011-07-02 _diffrn_detector.details ? # _diffrn_radiation.diffrn_id 1 _diffrn_radiation.wavelength_id 1 _diffrn_radiation.pdbx_monochromatic_or_laue_m_l M _diffrn_radiation.monochromator 'Si(111) double crystal monochromator' _diffrn_radiation.pdbx_diffrn_protocol 'SINGLE WAVELENGTH' _diffrn_radiation.pdbx_scattering_type x-ray # _diffrn_radiation_wavelength.id 1 _diffrn_radiation_wavelength.wavelength 0.979493 _diffrn_radiation_wavelength.wt 1.0 # _diffrn_source.diffrn_id 1 _diffrn_source.source SYNCHROTRON _diffrn_source.type 'DIAMOND BEAMLINE I02' _diffrn_source.pdbx_synchrotron_site Diamond _diffrn_source.pdbx_synchrotron_beamline I02 _diffrn_source.pdbx_wavelength ? _diffrn_source.pdbx_wavelength_list 0.979493 # _reflns.pdbx_diffrn_id 1 _reflns.pdbx_ordinal 1 _reflns.entry_id 4I8T _reflns.observed_criterion_sigma_I ? _reflns.observed_criterion_sigma_F ? _reflns.d_resolution_low 73.702 _reflns.d_resolution_high 3.000 _reflns.number_obs 6809 _reflns.number_all 22560 _reflns.percent_possible_obs 99.900 _reflns.pdbx_Rmerge_I_obs 0.180 _reflns.pdbx_Rsym_value ? _reflns.pdbx_netI_over_sigmaI 5.900 _reflns.B_iso_Wilson_estimate ? _reflns.pdbx_redundancy 3.300 _reflns.R_free_details ? _reflns.pdbx_chi_squared ? _reflns.pdbx_scaling_rejects ? # _reflns_shell.pdbx_diffrn_id 1 _reflns_shell.pdbx_ordinal 1 _reflns_shell.d_res_high 3.000 _reflns_shell.d_res_low 3.210 _reflns_shell.percent_possible_all 100.000 _reflns_shell.Rmerge_I_obs 0.013 _reflns_shell.pdbx_Rsym_value ? _reflns_shell.meanI_over_sigI_obs 0.900 _reflns_shell.pdbx_redundancy 3.300 _reflns_shell.percent_possible_obs ? _reflns_shell.number_unique_all ? _reflns_shell.number_measured_all ? _reflns_shell.number_measured_obs ? _reflns_shell.number_unique_obs ? _reflns_shell.pdbx_chi_squared ? # _refine.pdbx_refine_id 'X-RAY DIFFRACTION' _refine.entry_id 4I8T _refine.pdbx_diffrn_id 1 _refine.pdbx_TLS_residual_ADP_flag ? _refine.ls_number_reflns_obs 6799 _refine.ls_number_reflns_all ? _refine.pdbx_ls_sigma_I ? _refine.pdbx_ls_sigma_F 1.91 _refine.pdbx_data_cutoff_high_absF ? _refine.pdbx_data_cutoff_low_absF ? _refine.pdbx_data_cutoff_high_rms_absF ? _refine.ls_d_res_low 44.434 _refine.ls_d_res_high 3.000 _refine.ls_percent_reflns_obs 99.79 _refine.ls_R_factor_obs 0.2412 _refine.ls_R_factor_all ? _refine.ls_R_factor_R_work 0.2385 _refine.ls_R_factor_R_free 0.2934 _refine.ls_R_factor_R_free_error ? _refine.ls_R_factor_R_free_error_details ? _refine.ls_percent_reflns_R_free 4.79 _refine.ls_number_reflns_R_free 326 _refine.ls_number_parameters ? _refine.ls_number_restraints ? _refine.occupancy_min 0.140 _refine.occupancy_max 1.000 _refine.correlation_coeff_Fo_to_Fc ? _refine.correlation_coeff_Fo_to_Fc_free ? _refine.B_iso_mean 104.5102 _refine.aniso_B[1][1] ? _refine.aniso_B[2][2] ? _refine.aniso_B[3][3] ? _refine.aniso_B[1][2] ? _refine.aniso_B[1][3] ? _refine.aniso_B[2][3] ? _refine.solvent_model_details 'FLAT BULK SOLVENT MODEL' _refine.solvent_model_param_ksol ? _refine.solvent_model_param_bsol ? _refine.pdbx_solvent_vdw_probe_radii 1.11 _refine.pdbx_solvent_ion_probe_radii ? _refine.pdbx_solvent_shrinkage_radii 0.90 _refine.pdbx_ls_cross_valid_method ? _refine.details ? _refine.pdbx_starting_model 'pdb entry 3G5G' _refine.pdbx_method_to_determine_struct 'MOLECULAR REPLACEMENT' _refine.pdbx_isotropic_thermal_model ? _refine.pdbx_stereochemistry_target_values ML _refine.pdbx_stereochem_target_val_spec_case ? _refine.pdbx_R_Free_selection_details ? _refine.pdbx_overall_ESU_R ? _refine.pdbx_overall_ESU_R_Free ? _refine.overall_SU_ML 0.34 _refine.pdbx_overall_phase_error 32.62 _refine.overall_SU_B ? _refine.overall_SU_R_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_free_Cruickshank_DPI ? _refine.pdbx_overall_SU_R_Blow_DPI ? _refine.pdbx_overall_SU_R_free_Blow_DPI ? _refine.ls_redundancy_reflns_obs ? _refine.overall_SU_R_free ? _refine.ls_wR_factor_R_free ? _refine.ls_wR_factor_R_work ? _refine.overall_FOM_free_R_set ? _refine.overall_FOM_work_R_set ? # _refine_hist.pdbx_refine_id 'X-RAY DIFFRACTION' _refine_hist.cycle_id LAST _refine_hist.pdbx_number_atoms_protein 1220 _refine_hist.pdbx_number_atoms_nucleic_acid 779 _refine_hist.pdbx_number_atoms_ligand 0 _refine_hist.number_atoms_solvent 0 _refine_hist.number_atoms_total 1999 _refine_hist.d_res_high 3.000 _refine_hist.d_res_low 44.434 # loop_ _refine_ls_restr.type _refine_ls_restr.dev_ideal _refine_ls_restr.dev_ideal_target _refine_ls_restr.weight _refine_ls_restr.number _refine_ls_restr.pdbx_refine_id _refine_ls_restr.pdbx_restraint_function f_bond_d 0.003 ? ? 2134 'X-RAY DIFFRACTION' ? f_angle_d 0.737 ? ? 3030 'X-RAY DIFFRACTION' ? f_dihedral_angle_d 22.102 ? ? 885 'X-RAY DIFFRACTION' ? f_chiral_restr 0.042 ? ? 356 'X-RAY DIFFRACTION' ? f_plane_restr 0.001 ? ? 241 'X-RAY DIFFRACTION' ? # _struct.entry_id 4I8T _struct.title 'C.Esp1396I bound to a 19 base pair DNA duplex' _struct.pdbx_model_details ? _struct.pdbx_CASP_flag ? _struct.pdbx_model_type_details ? # _struct_keywords.entry_id 4I8T _struct_keywords.text 'Restriction-modification, helix-turn-helix, transcriptional regulator, DNA, Transcription-DNA complex' _struct_keywords.pdbx_keywords Transcription/DNA # loop_ _struct_asym.id _struct_asym.pdbx_blank_PDB_chainid_flag _struct_asym.pdbx_modified _struct_asym.entity_id _struct_asym.details A N N 1 ? B N N 1 ? C N N 2 ? D N N 3 ? # _struct_biol.id 1 _struct_biol.details ? # loop_ _struct_conf.conf_type_id _struct_conf.id _struct_conf.pdbx_PDB_helix_id _struct_conf.beg_label_comp_id _struct_conf.beg_label_asym_id _struct_conf.beg_label_seq_id _struct_conf.pdbx_beg_PDB_ins_code _struct_conf.end_label_comp_id _struct_conf.end_label_asym_id _struct_conf.end_label_seq_id _struct_conf.pdbx_end_PDB_ins_code _struct_conf.beg_auth_comp_id _struct_conf.beg_auth_asym_id _struct_conf.beg_auth_seq_id _struct_conf.end_auth_comp_id _struct_conf.end_auth_asym_id _struct_conf.end_auth_seq_id _struct_conf.pdbx_PDB_helix_class _struct_conf.details _struct_conf.pdbx_PDB_helix_length HELX_P HELX_P1 1 PHE A 7 ? LYS A 23 ? PHE A 4 LYS A 20 1 ? 17 HELX_P HELX_P2 2 THR A 26 ? SER A 34 ? THR A 23 SER A 31 1 ? 9 HELX_P HELX_P3 3 ASP A 37 ? ASN A 47 ? ASP A 34 ASN A 44 1 ? 11 HELX_P HELX_P4 4 THR A 52 ? LEU A 63 ? THR A 49 LEU A 60 1 ? 12 HELX_P HELX_P5 5 SER A 66 ? GLU A 77 ? SER A 63 GLU A 74 1 ? 12 HELX_P HELX_P6 6 LEU B 8 ? LYS B 23 ? LEU B 5 LYS B 20 1 ? 16 HELX_P HELX_P7 7 THR B 26 ? SER B 34 ? THR B 23 SER B 31 1 ? 9 HELX_P HELX_P8 8 ASP B 37 ? ARG B 46 ? ASP B 34 ARG B 43 1 ? 10 HELX_P HELX_P9 9 ILE B 53 ? LEU B 63 ? ILE B 50 LEU B 60 1 ? 11 HELX_P HELX_P10 10 SER B 66 ? LEU B 79 ? SER B 63 LEU B 76 1 ? 14 # _struct_conf_type.id HELX_P _struct_conf_type.criteria ? _struct_conf_type.reference ? # loop_ _struct_conn.id _struct_conn.conn_type_id _struct_conn.pdbx_leaving_atom_flag _struct_conn.pdbx_PDB_id _struct_conn.ptnr1_label_asym_id _struct_conn.ptnr1_label_comp_id _struct_conn.ptnr1_label_seq_id _struct_conn.ptnr1_label_atom_id _struct_conn.pdbx_ptnr1_label_alt_id _struct_conn.pdbx_ptnr1_PDB_ins_code _struct_conn.pdbx_ptnr1_standard_comp_id _struct_conn.ptnr1_symmetry _struct_conn.ptnr2_label_asym_id _struct_conn.ptnr2_label_comp_id _struct_conn.ptnr2_label_seq_id _struct_conn.ptnr2_label_atom_id _struct_conn.pdbx_ptnr2_label_alt_id _struct_conn.pdbx_ptnr2_PDB_ins_code _struct_conn.ptnr1_auth_asym_id _struct_conn.ptnr1_auth_comp_id _struct_conn.ptnr1_auth_seq_id _struct_conn.ptnr2_auth_asym_id _struct_conn.ptnr2_auth_comp_id _struct_conn.ptnr2_auth_seq_id _struct_conn.ptnr2_symmetry _struct_conn.pdbx_ptnr3_label_atom_id _struct_conn.pdbx_ptnr3_label_seq_id _struct_conn.pdbx_ptnr3_label_comp_id _struct_conn.pdbx_ptnr3_label_asym_id _struct_conn.pdbx_ptnr3_label_alt_id _struct_conn.pdbx_ptnr3_PDB_ins_code _struct_conn.details _struct_conn.pdbx_dist_value _struct_conn.pdbx_value_order _struct_conn.pdbx_role hydrog1 hydrog ? ? C DT 1 N3 ? ? ? 1_555 D DA 19 N1 ? ? C DT 1 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog2 hydrog ? ? C DT 1 O4 ? ? ? 1_555 D DA 19 N6 ? ? C DT 1 D DA 19 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog3 hydrog ? ? C DG 2 N1 ? ? ? 1_555 D DC 18 N3 ? ? C DG 2 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog4 hydrog ? ? C DG 2 N2 ? ? ? 1_555 D DC 18 O2 ? ? C DG 2 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog5 hydrog ? ? C DG 2 O6 ? ? ? 1_555 D DC 18 N4 ? ? C DG 2 D DC 18 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog6 hydrog ? ? C DT 3 N3 ? ? ? 1_555 D DA 17 N1 ? ? C DT 3 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog7 hydrog ? ? C DT 3 O4 ? ? ? 1_555 D DA 17 N6 ? ? C DT 3 D DA 17 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog8 hydrog ? ? C DT 4 N3 ? ? ? 1_555 D DA 16 N1 ? ? C DT 4 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog9 hydrog ? ? C DT 4 O4 ? ? ? 1_555 D DA 16 N6 ? ? C DT 4 D DA 16 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog10 hydrog ? ? C DG 5 N1 ? ? ? 1_555 D DC 15 N3 ? ? C DG 5 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog11 hydrog ? ? C DG 5 N2 ? ? ? 1_555 D DC 15 O2 ? ? C DG 5 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog12 hydrog ? ? C DG 5 O6 ? ? ? 1_555 D DC 15 N4 ? ? C DG 5 D DC 15 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog13 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DG 13 O6 ? ? C DA 6 D DG 13 1_555 ? ? ? ? ? ? 'DA-DG MISPAIR' ? ? ? hydrog14 hydrog ? ? C DA 6 N1 ? ? ? 1_555 D DT 14 N3 ? ? C DA 6 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog15 hydrog ? ? C DA 6 N6 ? ? ? 1_555 D DT 14 O4 ? ? C DA 6 D DT 14 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog16 hydrog ? ? C DC 7 O2 ? ? ? 1_555 D DG 13 N2 ? ? C DC 7 D DG 13 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog17 hydrog ? ? C DT 8 N3 ? ? ? 1_555 D DA 12 N1 ? ? C DT 8 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog18 hydrog ? ? C DT 8 O4 ? ? ? 1_555 D DA 12 N6 ? ? C DT 8 D DA 12 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog19 hydrog ? ? C DA 9 N1 ? ? ? 1_555 D DT 11 N3 ? ? C DA 9 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog20 hydrog ? ? C DA 9 N6 ? ? ? 1_555 D DT 11 O4 ? ? C DA 9 D DT 11 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog21 hydrog ? ? C DT 10 N3 ? ? ? 1_555 D DA 10 N1 ? ? C DT 10 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog22 hydrog ? ? C DT 10 O4 ? ? ? 1_555 D DA 10 N6 ? ? C DT 10 D DA 10 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog23 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 11 D DT 8 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog24 hydrog ? ? C DA 11 N1 ? ? ? 1_555 D DT 9 N3 ? ? C DA 11 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog25 hydrog ? ? C DA 11 N6 ? ? ? 1_555 D DT 9 O4 ? ? C DA 11 D DT 9 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog26 hydrog ? ? C DA 12 N1 ? ? ? 1_555 D DT 8 N3 ? ? C DA 12 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog27 hydrog ? ? C DA 12 N6 ? ? ? 1_555 D DT 8 O4 ? ? C DA 12 D DT 8 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog28 hydrog ? ? C DT 13 N3 ? ? ? 1_555 D DA 7 N1 ? ? C DT 13 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog29 hydrog ? ? C DT 13 O4 ? ? ? 1_555 D DA 7 N6 ? ? C DT 13 D DA 7 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog30 hydrog ? ? C DC 14 N3 ? ? ? 1_555 D DG 6 N1 ? ? C DC 14 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog31 hydrog ? ? C DC 14 N4 ? ? ? 1_555 D DG 6 O6 ? ? C DC 14 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog32 hydrog ? ? C DC 14 O2 ? ? ? 1_555 D DG 6 N2 ? ? C DC 14 D DG 6 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog33 hydrog ? ? C DA 15 N1 ? ? ? 1_555 D DT 5 N3 ? ? C DA 15 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog34 hydrog ? ? C DA 15 N6 ? ? ? 1_555 D DT 5 O4 ? ? C DA 15 D DT 5 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog35 hydrog ? ? C DC 16 O2 ? ? ? 1_555 D DG 4 N2 ? ? C DC 16 D DG 4 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog36 hydrog ? ? C DA 17 N6 ? ? ? 1_555 D DT 3 O4 ? ? C DA 17 D DT 3 1_555 ? ? ? ? ? ? 'DA-DT PAIR' ? ? ? hydrog37 hydrog ? ? C DC 18 O2 ? ? ? 1_555 D DG 2 N2 ? ? C DC 18 D DG 2 1_555 ? ? ? ? ? ? 'DC-DG PAIR' ? ? ? hydrog38 hydrog ? ? C DA 19 N1 ? ? ? 1_555 D DT 1 N3 ? ? C DA 19 D DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? hydrog39 hydrog ? ? C DA 19 N6 ? ? ? 1_555 D DT 1 O4 ? ? C DA 19 D DT 1 1_555 ? ? ? ? ? ? WATSON-CRICK ? ? ? # _struct_conn_type.id hydrog _struct_conn_type.criteria ? _struct_conn_type.reference ? # _struct_mon_prot_cis.pdbx_id 1 _struct_mon_prot_cis.label_comp_id ASN _struct_mon_prot_cis.label_seq_id 47 _struct_mon_prot_cis.label_asym_id A _struct_mon_prot_cis.label_alt_id . _struct_mon_prot_cis.pdbx_PDB_ins_code ? _struct_mon_prot_cis.auth_comp_id ASN _struct_mon_prot_cis.auth_seq_id 44 _struct_mon_prot_cis.auth_asym_id A _struct_mon_prot_cis.pdbx_label_comp_id_2 SER _struct_mon_prot_cis.pdbx_label_seq_id_2 48 _struct_mon_prot_cis.pdbx_label_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_ins_code_2 ? _struct_mon_prot_cis.pdbx_auth_comp_id_2 SER _struct_mon_prot_cis.pdbx_auth_seq_id_2 45 _struct_mon_prot_cis.pdbx_auth_asym_id_2 A _struct_mon_prot_cis.pdbx_PDB_model_num 1 _struct_mon_prot_cis.pdbx_omega_angle 1.36 # _atom_sites.entry_id 4I8T _atom_sites.fract_transf_matrix[1][1] 0.013243 _atom_sites.fract_transf_matrix[1][2] 0.000000 _atom_sites.fract_transf_matrix[1][3] 0.005750 _atom_sites.fract_transf_matrix[2][1] 0.000000 _atom_sites.fract_transf_matrix[2][2] 0.016431 _atom_sites.fract_transf_matrix[2][3] 0.000000 _atom_sites.fract_transf_matrix[3][1] 0.000000 _atom_sites.fract_transf_matrix[3][2] 0.000000 _atom_sites.fract_transf_matrix[3][3] 0.013568 _atom_sites.fract_transf_vector[1] 0.00000 _atom_sites.fract_transf_vector[2] 0.00000 _atom_sites.fract_transf_vector[3] 0.00000 # loop_ _atom_type.symbol C N O P S # loop_ _pdbx_poly_seq_scheme.asym_id _pdbx_poly_seq_scheme.entity_id _pdbx_poly_seq_scheme.seq_id _pdbx_poly_seq_scheme.mon_id _pdbx_poly_seq_scheme.ndb_seq_num _pdbx_poly_seq_scheme.pdb_seq_num _pdbx_poly_seq_scheme.auth_seq_num _pdbx_poly_seq_scheme.pdb_mon_id _pdbx_poly_seq_scheme.auth_mon_id _pdbx_poly_seq_scheme.pdb_strand_id _pdbx_poly_seq_scheme.pdb_ins_code _pdbx_poly_seq_scheme.hetero A 1 1 GLY 1 -2 ? ? ? A . n A 1 2 SER 2 -1 ? ? ? A . n A 1 3 HIS 3 0 ? ? ? A . n A 1 4 MET 4 1 ? ? ? A . n A 1 5 GLU 5 2 ? ? ? A . n A 1 6 SER 6 3 3 SER SER A . n A 1 7 PHE 7 4 4 PHE PHE A . n A 1 8 LEU 8 5 5 LEU LEU A . n A 1 9 LEU 9 6 6 LEU LEU A . n A 1 10 SER 10 7 7 SER SER A . n A 1 11 LYS 11 8 8 LYS LYS A . n A 1 12 VAL 12 9 9 VAL VAL A . n A 1 13 SER 13 10 10 SER SER A . n A 1 14 PHE 14 11 11 PHE PHE A . n A 1 15 VAL 15 12 12 VAL VAL A . n A 1 16 ILE 16 13 13 ILE ILE A . n A 1 17 LYS 17 14 14 LYS LYS A . n A 1 18 LYS 18 15 15 LYS LYS A . n A 1 19 ILE 19 16 16 ILE ILE A . n A 1 20 ARG 20 17 17 ARG ARG A . n A 1 21 LEU 21 18 18 LEU LEU A . n A 1 22 GLU 22 19 19 GLU GLU A . n A 1 23 LYS 23 20 20 LYS LYS A . n A 1 24 GLY 24 21 21 GLY GLY A . n A 1 25 MET 25 22 22 MET MET A . n A 1 26 THR 26 23 23 THR THR A . n A 1 27 GLN 27 24 24 GLN GLN A . n A 1 28 GLU 28 25 25 GLU GLU A . n A 1 29 ASP 29 26 26 ASP ASP A . n A 1 30 LEU 30 27 27 LEU LEU A . n A 1 31 ALA 31 28 28 ALA ALA A . n A 1 32 TYR 32 29 29 TYR TYR A . n A 1 33 LYS 33 30 30 LYS LYS A . n A 1 34 SER 34 31 31 SER SER A . n A 1 35 ASN 35 32 32 ASN ASN A . n A 1 36 LEU 36 33 33 LEU LEU A . n A 1 37 ASP 37 34 34 ASP ASP A . n A 1 38 ARG 38 35 35 ARG ARG A . n A 1 39 THR 39 36 36 THR THR A . n A 1 40 TYR 40 37 37 TYR TYR A . n A 1 41 ILE 41 38 38 ILE ILE A . n A 1 42 SER 42 39 39 SER SER A . n A 1 43 GLY 43 40 40 GLY GLY A . n A 1 44 ILE 44 41 41 ILE ILE A . n A 1 45 GLU 45 42 42 GLU GLU A . n A 1 46 ARG 46 43 43 ARG ARG A . n A 1 47 ASN 47 44 44 ASN ASN A . n A 1 48 SER 48 45 45 SER SER A . n A 1 49 ARG 49 46 46 ARG ARG A . n A 1 50 ASN 50 47 47 ASN ASN A . n A 1 51 LEU 51 48 48 LEU LEU A . n A 1 52 THR 52 49 49 THR THR A . n A 1 53 ILE 53 50 50 ILE ILE A . n A 1 54 LYS 54 51 51 LYS LYS A . n A 1 55 SER 55 52 52 SER SER A . n A 1 56 LEU 56 53 53 LEU LEU A . n A 1 57 GLU 57 54 54 GLU GLU A . n A 1 58 LEU 58 55 55 LEU LEU A . n A 1 59 ILE 59 56 56 ILE ILE A . n A 1 60 MET 60 57 57 MET MET A . n A 1 61 LYS 61 58 58 LYS LYS A . n A 1 62 GLY 62 59 59 GLY GLY A . n A 1 63 LEU 63 60 60 LEU LEU A . n A 1 64 GLU 64 61 61 GLU GLU A . n A 1 65 VAL 65 62 62 VAL VAL A . n A 1 66 SER 66 63 63 SER SER A . n A 1 67 ASP 67 64 64 ASP ASP A . n A 1 68 VAL 68 65 65 VAL VAL A . n A 1 69 VAL 69 66 66 VAL VAL A . n A 1 70 PHE 70 67 67 PHE PHE A . n A 1 71 PHE 71 68 68 PHE PHE A . n A 1 72 GLU 72 69 69 GLU GLU A . n A 1 73 MET 73 70 70 MET MET A . n A 1 74 LEU 74 71 71 LEU LEU A . n A 1 75 ILE 75 72 72 ILE ILE A . n A 1 76 LYS 76 73 73 LYS LYS A . n A 1 77 GLU 77 74 74 GLU GLU A . n A 1 78 ILE 78 75 75 ILE ILE A . n A 1 79 LEU 79 76 76 LEU LEU A . n A 1 80 LYS 80 77 77 LYS LYS A . n A 1 81 HIS 81 78 ? ? ? A . n A 1 82 ASP 82 79 ? ? ? A . n B 1 1 GLY 1 -2 ? ? ? B . n B 1 2 SER 2 -1 ? ? ? B . n B 1 3 HIS 3 0 ? ? ? B . n B 1 4 MET 4 1 ? ? ? B . n B 1 5 GLU 5 2 2 GLU GLU B . n B 1 6 SER 6 3 3 SER SER B . n B 1 7 PHE 7 4 4 PHE PHE B . n B 1 8 LEU 8 5 5 LEU LEU B . n B 1 9 LEU 9 6 6 LEU LEU B . n B 1 10 SER 10 7 7 SER SER B . n B 1 11 LYS 11 8 8 LYS LYS B . n B 1 12 VAL 12 9 9 VAL VAL B . n B 1 13 SER 13 10 10 SER SER B . n B 1 14 PHE 14 11 11 PHE PHE B . n B 1 15 VAL 15 12 12 VAL VAL B . n B 1 16 ILE 16 13 13 ILE ILE B . n B 1 17 LYS 17 14 14 LYS LYS B . n B 1 18 LYS 18 15 15 LYS LYS B . n B 1 19 ILE 19 16 16 ILE ILE B . n B 1 20 ARG 20 17 17 ARG ARG B . n B 1 21 LEU 21 18 18 LEU LEU B . n B 1 22 GLU 22 19 19 GLU GLU B . n B 1 23 LYS 23 20 20 LYS LYS B . n B 1 24 GLY 24 21 21 GLY GLY B . n B 1 25 MET 25 22 22 MET MET B . n B 1 26 THR 26 23 23 THR THR B . n B 1 27 GLN 27 24 24 GLN GLN B . n B 1 28 GLU 28 25 25 GLU GLU B . n B 1 29 ASP 29 26 26 ASP ASP B . n B 1 30 LEU 30 27 27 LEU LEU B . n B 1 31 ALA 31 28 28 ALA ALA B . n B 1 32 TYR 32 29 29 TYR TYR B . n B 1 33 LYS 33 30 30 LYS LYS B . n B 1 34 SER 34 31 31 SER SER B . n B 1 35 ASN 35 32 32 ASN ASN B . n B 1 36 LEU 36 33 33 LEU LEU B . n B 1 37 ASP 37 34 34 ASP ASP B . n B 1 38 ARG 38 35 35 ARG ARG B . n B 1 39 THR 39 36 36 THR THR B . n B 1 40 TYR 40 37 37 TYR TYR B . n B 1 41 ILE 41 38 38 ILE ILE B . n B 1 42 SER 42 39 39 SER SER B . n B 1 43 GLY 43 40 40 GLY GLY B . n B 1 44 ILE 44 41 41 ILE ILE B . n B 1 45 GLU 45 42 42 GLU GLU B . n B 1 46 ARG 46 43 43 ARG ARG B . n B 1 47 ASN 47 44 44 ASN ASN B . n B 1 48 SER 48 45 45 SER SER B . n B 1 49 ARG 49 46 46 ARG ARG B . n B 1 50 ASN 50 47 47 ASN ASN B . n B 1 51 LEU 51 48 48 LEU LEU B . n B 1 52 THR 52 49 49 THR THR B . n B 1 53 ILE 53 50 50 ILE ILE B . n B 1 54 LYS 54 51 51 LYS LYS B . n B 1 55 SER 55 52 52 SER SER B . n B 1 56 LEU 56 53 53 LEU LEU B . n B 1 57 GLU 57 54 54 GLU GLU B . n B 1 58 LEU 58 55 55 LEU LEU B . n B 1 59 ILE 59 56 56 ILE ILE B . n B 1 60 MET 60 57 57 MET MET B . n B 1 61 LYS 61 58 58 LYS LYS B . n B 1 62 GLY 62 59 59 GLY GLY B . n B 1 63 LEU 63 60 60 LEU LEU B . n B 1 64 GLU 64 61 61 GLU GLU B . n B 1 65 VAL 65 62 62 VAL VAL B . n B 1 66 SER 66 63 63 SER SER B . n B 1 67 ASP 67 64 64 ASP ASP B . n B 1 68 VAL 68 65 65 VAL VAL B . n B 1 69 VAL 69 66 66 VAL VAL B . n B 1 70 PHE 70 67 67 PHE PHE B . n B 1 71 PHE 71 68 68 PHE PHE B . n B 1 72 GLU 72 69 69 GLU GLU B . n B 1 73 MET 73 70 70 MET MET B . n B 1 74 LEU 74 71 71 LEU LEU B . n B 1 75 ILE 75 72 72 ILE ILE B . n B 1 76 LYS 76 73 73 LYS LYS B . n B 1 77 GLU 77 74 74 GLU GLU B . n B 1 78 ILE 78 75 75 ILE ILE B . n B 1 79 LEU 79 76 76 LEU LEU B . n B 1 80 LYS 80 77 ? ? ? B . n B 1 81 HIS 81 78 ? ? ? B . n B 1 82 ASP 82 79 ? ? ? B . n C 2 1 DT 1 1 1 DT DT C . n C 2 2 DG 2 2 2 DG DG C . n C 2 3 DT 3 3 3 DT DT C . n C 2 4 DT 4 4 4 DT DT C . n C 2 5 DG 5 5 5 DG DG C . n C 2 6 DA 6 6 6 DA DA C . n C 2 7 DC 7 7 7 DC DC C . n C 2 8 DT 8 8 8 DT DT C . n C 2 9 DA 9 9 9 DA DA C . n C 2 10 DT 10 10 10 DT DT C . n C 2 11 DA 11 11 11 DA DA C . n C 2 12 DA 12 12 12 DA DA C . n C 2 13 DT 13 13 13 DT DT C . n C 2 14 DC 14 14 14 DC DC C . n C 2 15 DA 15 15 15 DA DA C . n C 2 16 DC 16 16 16 DC DC C . n C 2 17 DA 17 17 17 DA DA C . n C 2 18 DC 18 18 18 DC DC C . n C 2 19 DA 19 19 19 DA DA C . n D 3 1 DT 1 1 1 DT DT D . n D 3 2 DG 2 2 2 DG DG D . n D 3 3 DT 3 3 3 DT DT D . n D 3 4 DG 4 4 4 DG DG D . n D 3 5 DT 5 5 5 DT DT D . n D 3 6 DG 6 6 6 DG DG D . n D 3 7 DA 7 7 7 DA DA D . n D 3 8 DT 8 8 8 DT DT D . n D 3 9 DT 9 9 9 DT DT D . n D 3 10 DA 10 10 10 DA DA D . n D 3 11 DT 11 11 11 DT DT D . n D 3 12 DA 12 12 12 DA DA D . n D 3 13 DG 13 13 13 DG DG D . n D 3 14 DT 14 14 14 DT DT D . n D 3 15 DC 15 15 15 DC DC D . n D 3 16 DA 16 16 16 DA DA D . n D 3 17 DA 17 17 17 DA DA D . n D 3 18 DC 18 18 18 DC DC D . n D 3 19 DA 19 19 19 DA DA D . n # _pdbx_struct_assembly.id 1 _pdbx_struct_assembly.details author_and_software_defined_assembly _pdbx_struct_assembly.method_details PISA _pdbx_struct_assembly.oligomeric_details tetrameric _pdbx_struct_assembly.oligomeric_count 4 # _pdbx_struct_assembly_gen.assembly_id 1 _pdbx_struct_assembly_gen.oper_expression 1 _pdbx_struct_assembly_gen.asym_id_list A,B,C,D # loop_ _pdbx_struct_assembly_prop.biol_id _pdbx_struct_assembly_prop.type _pdbx_struct_assembly_prop.value _pdbx_struct_assembly_prop.details 1 'ABSA (A^2)' 4250 ? 1 MORE -31 ? 1 'SSA (A^2)' 14530 ? # _pdbx_struct_oper_list.id 1 _pdbx_struct_oper_list.type 'identity operation' _pdbx_struct_oper_list.name 1_555 _pdbx_struct_oper_list.symmetry_operation x,y,z _pdbx_struct_oper_list.matrix[1][1] 1.0000000000 _pdbx_struct_oper_list.matrix[1][2] 0.0000000000 _pdbx_struct_oper_list.matrix[1][3] 0.0000000000 _pdbx_struct_oper_list.vector[1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][1] 0.0000000000 _pdbx_struct_oper_list.matrix[2][2] 1.0000000000 _pdbx_struct_oper_list.matrix[2][3] 0.0000000000 _pdbx_struct_oper_list.vector[2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][1] 0.0000000000 _pdbx_struct_oper_list.matrix[3][2] 0.0000000000 _pdbx_struct_oper_list.matrix[3][3] 1.0000000000 _pdbx_struct_oper_list.vector[3] 0.0000000000 # loop_ _pdbx_audit_revision_history.ordinal _pdbx_audit_revision_history.data_content_type _pdbx_audit_revision_history.major_revision _pdbx_audit_revision_history.minor_revision _pdbx_audit_revision_history.revision_date 1 'Structure model' 1 0 2013-09-11 2 'Structure model' 1 1 2023-09-20 # _pdbx_audit_revision_details.ordinal 1 _pdbx_audit_revision_details.revision_ordinal 1 _pdbx_audit_revision_details.data_content_type 'Structure model' _pdbx_audit_revision_details.provider repository _pdbx_audit_revision_details.type 'Initial release' _pdbx_audit_revision_details.description ? _pdbx_audit_revision_details.details ? # loop_ _pdbx_audit_revision_group.ordinal _pdbx_audit_revision_group.revision_ordinal _pdbx_audit_revision_group.data_content_type _pdbx_audit_revision_group.group 1 2 'Structure model' 'Data collection' 2 2 'Structure model' 'Database references' 3 2 'Structure model' 'Refinement description' # loop_ _pdbx_audit_revision_category.ordinal _pdbx_audit_revision_category.revision_ordinal _pdbx_audit_revision_category.data_content_type _pdbx_audit_revision_category.category 1 2 'Structure model' chem_comp_atom 2 2 'Structure model' chem_comp_bond 3 2 'Structure model' database_2 4 2 'Structure model' pdbx_initial_refinement_model 5 2 'Structure model' struct_ref_seq_dif # loop_ _pdbx_audit_revision_item.ordinal _pdbx_audit_revision_item.revision_ordinal _pdbx_audit_revision_item.data_content_type _pdbx_audit_revision_item.item 1 2 'Structure model' '_database_2.pdbx_DOI' 2 2 'Structure model' '_database_2.pdbx_database_accession' 3 2 'Structure model' '_struct_ref_seq_dif.details' # _pdbx_phasing_MR.entry_id 4I8T _pdbx_phasing_MR.method_rotation ? _pdbx_phasing_MR.method_translation ? _pdbx_phasing_MR.model_details 'Phaser MODE: MR_AUTO' _pdbx_phasing_MR.R_factor ? _pdbx_phasing_MR.R_rigid_body ? _pdbx_phasing_MR.correlation_coeff_Fo_to_Fc ? _pdbx_phasing_MR.correlation_coeff_Io_to_Ic ? _pdbx_phasing_MR.d_res_high_rotation 3.000 _pdbx_phasing_MR.d_res_low_rotation 45.720 _pdbx_phasing_MR.d_res_high_translation 3.000 _pdbx_phasing_MR.d_res_low_translation 45.720 _pdbx_phasing_MR.packing ? _pdbx_phasing_MR.reflns_percent_rotation ? _pdbx_phasing_MR.reflns_percent_translation ? _pdbx_phasing_MR.sigma_F_rotation ? _pdbx_phasing_MR.sigma_F_translation ? _pdbx_phasing_MR.sigma_I_rotation ? _pdbx_phasing_MR.sigma_I_translation ? # _phasing.method MR # loop_ _software.pdbx_ordinal _software.name _software.version _software.date _software.type _software.contact_author _software.contact_author_email _software.classification _software.location _software.language _software.citation_id 1 MOSFLM . ? package 'Andrew G.W. Leslie' andrew@mrc-lmb.cam.ac.uk 'data reduction' http://www.mrc-lmb.cam.ac.uk/harry/mosflm/ ? ? 2 Aimless 0.1.26 03/07/12 program 'Phil Evans' ? 'data scaling' http://www.mrc-lmb.cam.ac.uk/harry/pre/aimless.html ? ? 3 PHASER 2.5.1 'Tue Jul 10 12:42:19 2012 (svn )' program 'Randy J. Read' cimr-phaser@lists.cam.ac.uk phasing http://www-structmed.cimr.cam.ac.uk/phaser/ ? ? 4 PHENIX 1.8_1069 ? package 'Paul D. Adams' PDAdams@lbl.gov refinement http://www.phenix-online.org/ C++ ? 5 PDB_EXTRACT 3.11 'April 22, 2011' package PDB deposit@deposit.rcsb.org 'data extraction' http://sw-tools.pdb.org/apps/PDB_EXTRACT/ C++ ? 6 GDA . ? ? ? ? 'data collection' ? ? ? # loop_ _pdbx_validate_rmsd_angle.id _pdbx_validate_rmsd_angle.PDB_model_num _pdbx_validate_rmsd_angle.auth_atom_id_1 _pdbx_validate_rmsd_angle.auth_asym_id_1 _pdbx_validate_rmsd_angle.auth_comp_id_1 _pdbx_validate_rmsd_angle.auth_seq_id_1 _pdbx_validate_rmsd_angle.PDB_ins_code_1 _pdbx_validate_rmsd_angle.label_alt_id_1 _pdbx_validate_rmsd_angle.auth_atom_id_2 _pdbx_validate_rmsd_angle.auth_asym_id_2 _pdbx_validate_rmsd_angle.auth_comp_id_2 _pdbx_validate_rmsd_angle.auth_seq_id_2 _pdbx_validate_rmsd_angle.PDB_ins_code_2 _pdbx_validate_rmsd_angle.label_alt_id_2 _pdbx_validate_rmsd_angle.auth_atom_id_3 _pdbx_validate_rmsd_angle.auth_asym_id_3 _pdbx_validate_rmsd_angle.auth_comp_id_3 _pdbx_validate_rmsd_angle.auth_seq_id_3 _pdbx_validate_rmsd_angle.PDB_ins_code_3 _pdbx_validate_rmsd_angle.label_alt_id_3 _pdbx_validate_rmsd_angle.angle_value _pdbx_validate_rmsd_angle.angle_target_value _pdbx_validate_rmsd_angle.angle_deviation _pdbx_validate_rmsd_angle.angle_standard_deviation _pdbx_validate_rmsd_angle.linker_flag 1 1 "O4'" C DT 3 ? ? "C1'" C DT 3 ? ? N1 C DT 3 ? ? 110.63 108.30 2.33 0.30 N 2 1 "O4'" C DA 17 ? ? "C1'" C DA 17 ? ? N9 C DA 17 ? ? 110.68 108.30 2.38 0.30 N 3 1 "O4'" D DC 15 ? ? "C1'" D DC 15 ? ? N1 D DC 15 ? ? 110.23 108.30 1.93 0.30 N # loop_ _pdbx_validate_torsion.id _pdbx_validate_torsion.PDB_model_num _pdbx_validate_torsion.auth_comp_id _pdbx_validate_torsion.auth_asym_id _pdbx_validate_torsion.auth_seq_id _pdbx_validate_torsion.PDB_ins_code _pdbx_validate_torsion.label_alt_id _pdbx_validate_torsion.phi _pdbx_validate_torsion.psi 1 1 PHE A 4 ? ? -122.02 -66.20 2 1 ASN A 44 ? ? 75.42 87.60 3 1 SER A 45 ? ? -160.24 -163.81 4 1 LEU A 48 ? ? 62.17 102.21 5 1 SER B 3 ? ? -167.60 -39.49 6 1 LEU B 5 ? ? 67.39 -62.39 7 1 LEU B 33 ? ? -104.86 -158.43 8 1 LEU B 48 ? ? 66.43 123.04 # loop_ _pdbx_unobs_or_zero_occ_residues.id _pdbx_unobs_or_zero_occ_residues.PDB_model_num _pdbx_unobs_or_zero_occ_residues.polymer_flag _pdbx_unobs_or_zero_occ_residues.occupancy_flag _pdbx_unobs_or_zero_occ_residues.auth_asym_id _pdbx_unobs_or_zero_occ_residues.auth_comp_id _pdbx_unobs_or_zero_occ_residues.auth_seq_id _pdbx_unobs_or_zero_occ_residues.PDB_ins_code _pdbx_unobs_or_zero_occ_residues.label_asym_id _pdbx_unobs_or_zero_occ_residues.label_comp_id _pdbx_unobs_or_zero_occ_residues.label_seq_id 1 1 Y 1 A GLY -2 ? A GLY 1 2 1 Y 1 A SER -1 ? A SER 2 3 1 Y 1 A HIS 0 ? A HIS 3 4 1 Y 1 A MET 1 ? A MET 4 5 1 Y 1 A GLU 2 ? A GLU 5 6 1 Y 1 A HIS 78 ? A HIS 81 7 1 Y 1 A ASP 79 ? A ASP 82 8 1 Y 1 B GLY -2 ? B GLY 1 9 1 Y 1 B SER -1 ? B SER 2 10 1 Y 1 B HIS 0 ? B HIS 3 11 1 Y 1 B MET 1 ? B MET 4 12 1 Y 1 B LYS 77 ? B LYS 80 13 1 Y 1 B HIS 78 ? B HIS 81 14 1 Y 1 B ASP 79 ? B ASP 82 # loop_ _chem_comp_atom.comp_id _chem_comp_atom.atom_id _chem_comp_atom.type_symbol _chem_comp_atom.pdbx_aromatic_flag _chem_comp_atom.pdbx_stereo_config _chem_comp_atom.pdbx_ordinal ALA N N N N 1 ALA CA C N S 2 ALA C C N N 3 ALA O O N N 4 ALA CB C N N 5 ALA OXT O N N 6 ALA H H N N 7 ALA H2 H N N 8 ALA HA H N N 9 ALA HB1 H N N 10 ALA HB2 H N N 11 ALA HB3 H N N 12 ALA HXT H N N 13 ARG N N N N 14 ARG CA C N S 15 ARG C C N N 16 ARG O O N N 17 ARG CB C N N 18 ARG CG C N N 19 ARG CD C N N 20 ARG NE N N N 21 ARG CZ C N N 22 ARG NH1 N N N 23 ARG NH2 N N N 24 ARG OXT O N N 25 ARG H H N N 26 ARG H2 H N N 27 ARG HA H N N 28 ARG HB2 H N N 29 ARG HB3 H N N 30 ARG HG2 H N N 31 ARG HG3 H N N 32 ARG HD2 H N N 33 ARG HD3 H N N 34 ARG HE H N N 35 ARG HH11 H N N 36 ARG HH12 H N N 37 ARG HH21 H N N 38 ARG HH22 H N N 39 ARG HXT H N N 40 ASN N N N N 41 ASN CA C N S 42 ASN C C N N 43 ASN O O N N 44 ASN CB C N N 45 ASN CG C N N 46 ASN OD1 O N N 47 ASN ND2 N N N 48 ASN OXT O N N 49 ASN H H N N 50 ASN H2 H N N 51 ASN HA H N N 52 ASN HB2 H N N 53 ASN HB3 H N N 54 ASN HD21 H N N 55 ASN HD22 H N N 56 ASN HXT H N N 57 ASP N N N N 58 ASP CA C N S 59 ASP C C N N 60 ASP O O N N 61 ASP CB C N N 62 ASP CG C N N 63 ASP OD1 O N N 64 ASP OD2 O N N 65 ASP OXT O N N 66 ASP H H N N 67 ASP H2 H N N 68 ASP HA H N N 69 ASP HB2 H N N 70 ASP HB3 H N N 71 ASP HD2 H N N 72 ASP HXT H N N 73 DA OP3 O N N 74 DA P P N N 75 DA OP1 O N N 76 DA OP2 O N N 77 DA "O5'" O N N 78 DA "C5'" C N N 79 DA "C4'" C N R 80 DA "O4'" O N N 81 DA "C3'" C N S 82 DA "O3'" O N N 83 DA "C2'" C N N 84 DA "C1'" C N R 85 DA N9 N Y N 86 DA C8 C Y N 87 DA N7 N Y N 88 DA C5 C Y N 89 DA C6 C Y N 90 DA N6 N N N 91 DA N1 N Y N 92 DA C2 C Y N 93 DA N3 N Y N 94 DA C4 C Y N 95 DA HOP3 H N N 96 DA HOP2 H N N 97 DA "H5'" H N N 98 DA "H5''" H N N 99 DA "H4'" H N N 100 DA "H3'" H N N 101 DA "HO3'" H N N 102 DA "H2'" H N N 103 DA "H2''" H N N 104 DA "H1'" H N N 105 DA H8 H N N 106 DA H61 H N N 107 DA H62 H N N 108 DA H2 H N N 109 DC OP3 O N N 110 DC P P N N 111 DC OP1 O N N 112 DC OP2 O N N 113 DC "O5'" O N N 114 DC "C5'" C N N 115 DC "C4'" C N R 116 DC "O4'" O N N 117 DC "C3'" C N S 118 DC "O3'" O N N 119 DC "C2'" C N N 120 DC "C1'" C N R 121 DC N1 N N N 122 DC C2 C N N 123 DC O2 O N N 124 DC N3 N N N 125 DC C4 C N N 126 DC N4 N N N 127 DC C5 C N N 128 DC C6 C N N 129 DC HOP3 H N N 130 DC HOP2 H N N 131 DC "H5'" H N N 132 DC "H5''" H N N 133 DC "H4'" H N N 134 DC "H3'" H N N 135 DC "HO3'" H N N 136 DC "H2'" H N N 137 DC "H2''" H N N 138 DC "H1'" H N N 139 DC H41 H N N 140 DC H42 H N N 141 DC H5 H N N 142 DC H6 H N N 143 DG OP3 O N N 144 DG P P N N 145 DG OP1 O N N 146 DG OP2 O N N 147 DG "O5'" O N N 148 DG "C5'" C N N 149 DG "C4'" C N R 150 DG "O4'" O N N 151 DG "C3'" C N S 152 DG "O3'" O N N 153 DG "C2'" C N N 154 DG "C1'" C N R 155 DG N9 N Y N 156 DG C8 C Y N 157 DG N7 N Y N 158 DG C5 C Y N 159 DG C6 C N N 160 DG O6 O N N 161 DG N1 N N N 162 DG C2 C N N 163 DG N2 N N N 164 DG N3 N N N 165 DG C4 C Y N 166 DG HOP3 H N N 167 DG HOP2 H N N 168 DG "H5'" H N N 169 DG "H5''" H N N 170 DG "H4'" H N N 171 DG "H3'" H N N 172 DG "HO3'" H N N 173 DG "H2'" H N N 174 DG "H2''" H N N 175 DG "H1'" H N N 176 DG H8 H N N 177 DG H1 H N N 178 DG H21 H N N 179 DG H22 H N N 180 DT OP3 O N N 181 DT P P N N 182 DT OP1 O N N 183 DT OP2 O N N 184 DT "O5'" O N N 185 DT "C5'" C N N 186 DT "C4'" C N R 187 DT "O4'" O N N 188 DT "C3'" C N S 189 DT "O3'" O N N 190 DT "C2'" C N N 191 DT "C1'" C N R 192 DT N1 N N N 193 DT C2 C N N 194 DT O2 O N N 195 DT N3 N N N 196 DT C4 C N N 197 DT O4 O N N 198 DT C5 C N N 199 DT C7 C N N 200 DT C6 C N N 201 DT HOP3 H N N 202 DT HOP2 H N N 203 DT "H5'" H N N 204 DT "H5''" H N N 205 DT "H4'" H N N 206 DT "H3'" H N N 207 DT "HO3'" H N N 208 DT "H2'" H N N 209 DT "H2''" H N N 210 DT "H1'" H N N 211 DT H3 H N N 212 DT H71 H N N 213 DT H72 H N N 214 DT H73 H N N 215 DT H6 H N N 216 GLN N N N N 217 GLN CA C N S 218 GLN C C N N 219 GLN O O N N 220 GLN CB C N N 221 GLN CG C N N 222 GLN CD C N N 223 GLN OE1 O N N 224 GLN NE2 N N N 225 GLN OXT O N N 226 GLN H H N N 227 GLN H2 H N N 228 GLN HA H N N 229 GLN HB2 H N N 230 GLN HB3 H N N 231 GLN HG2 H N N 232 GLN HG3 H N N 233 GLN HE21 H N N 234 GLN HE22 H N N 235 GLN HXT H N N 236 GLU N N N N 237 GLU CA C N S 238 GLU C C N N 239 GLU O O N N 240 GLU CB C N N 241 GLU CG C N N 242 GLU CD C N N 243 GLU OE1 O N N 244 GLU OE2 O N N 245 GLU OXT O N N 246 GLU H H N N 247 GLU H2 H N N 248 GLU HA H N N 249 GLU HB2 H N N 250 GLU HB3 H N N 251 GLU HG2 H N N 252 GLU HG3 H N N 253 GLU HE2 H N N 254 GLU HXT H N N 255 GLY N N N N 256 GLY CA C N N 257 GLY C C N N 258 GLY O O N N 259 GLY OXT O N N 260 GLY H H N N 261 GLY H2 H N N 262 GLY HA2 H N N 263 GLY HA3 H N N 264 GLY HXT H N N 265 HIS N N N N 266 HIS CA C N S 267 HIS C C N N 268 HIS O O N N 269 HIS CB C N N 270 HIS CG C Y N 271 HIS ND1 N Y N 272 HIS CD2 C Y N 273 HIS CE1 C Y N 274 HIS NE2 N Y N 275 HIS OXT O N N 276 HIS H H N N 277 HIS H2 H N N 278 HIS HA H N N 279 HIS HB2 H N N 280 HIS HB3 H N N 281 HIS HD1 H N N 282 HIS HD2 H N N 283 HIS HE1 H N N 284 HIS HE2 H N N 285 HIS HXT H N N 286 ILE N N N N 287 ILE CA C N S 288 ILE C C N N 289 ILE O O N N 290 ILE CB C N S 291 ILE CG1 C N N 292 ILE CG2 C N N 293 ILE CD1 C N N 294 ILE OXT O N N 295 ILE H H N N 296 ILE H2 H N N 297 ILE HA H N N 298 ILE HB H N N 299 ILE HG12 H N N 300 ILE HG13 H N N 301 ILE HG21 H N N 302 ILE HG22 H N N 303 ILE HG23 H N N 304 ILE HD11 H N N 305 ILE HD12 H N N 306 ILE HD13 H N N 307 ILE HXT H N N 308 LEU N N N N 309 LEU CA C N S 310 LEU C C N N 311 LEU O O N N 312 LEU CB C N N 313 LEU CG C N N 314 LEU CD1 C N N 315 LEU CD2 C N N 316 LEU OXT O N N 317 LEU H H N N 318 LEU H2 H N N 319 LEU HA H N N 320 LEU HB2 H N N 321 LEU HB3 H N N 322 LEU HG H N N 323 LEU HD11 H N N 324 LEU HD12 H N N 325 LEU HD13 H N N 326 LEU HD21 H N N 327 LEU HD22 H N N 328 LEU HD23 H N N 329 LEU HXT H N N 330 LYS N N N N 331 LYS CA C N S 332 LYS C C N N 333 LYS O O N N 334 LYS CB C N N 335 LYS CG C N N 336 LYS CD C N N 337 LYS CE C N N 338 LYS NZ N N N 339 LYS OXT O N N 340 LYS H H N N 341 LYS H2 H N N 342 LYS HA H N N 343 LYS HB2 H N N 344 LYS HB3 H N N 345 LYS HG2 H N N 346 LYS HG3 H N N 347 LYS HD2 H N N 348 LYS HD3 H N N 349 LYS HE2 H N N 350 LYS HE3 H N N 351 LYS HZ1 H N N 352 LYS HZ2 H N N 353 LYS HZ3 H N N 354 LYS HXT H N N 355 MET N N N N 356 MET CA C N S 357 MET C C N N 358 MET O O N N 359 MET CB C N N 360 MET CG C N N 361 MET SD S N N 362 MET CE C N N 363 MET OXT O N N 364 MET H H N N 365 MET H2 H N N 366 MET HA H N N 367 MET HB2 H N N 368 MET HB3 H N N 369 MET HG2 H N N 370 MET HG3 H N N 371 MET HE1 H N N 372 MET HE2 H N N 373 MET HE3 H N N 374 MET HXT H N N 375 PHE N N N N 376 PHE CA C N S 377 PHE C C N N 378 PHE O O N N 379 PHE CB C N N 380 PHE CG C Y N 381 PHE CD1 C Y N 382 PHE CD2 C Y N 383 PHE CE1 C Y N 384 PHE CE2 C Y N 385 PHE CZ C Y N 386 PHE OXT O N N 387 PHE H H N N 388 PHE H2 H N N 389 PHE HA H N N 390 PHE HB2 H N N 391 PHE HB3 H N N 392 PHE HD1 H N N 393 PHE HD2 H N N 394 PHE HE1 H N N 395 PHE HE2 H N N 396 PHE HZ H N N 397 PHE HXT H N N 398 SER N N N N 399 SER CA C N S 400 SER C C N N 401 SER O O N N 402 SER CB C N N 403 SER OG O N N 404 SER OXT O N N 405 SER H H N N 406 SER H2 H N N 407 SER HA H N N 408 SER HB2 H N N 409 SER HB3 H N N 410 SER HG H N N 411 SER HXT H N N 412 THR N N N N 413 THR CA C N S 414 THR C C N N 415 THR O O N N 416 THR CB C N R 417 THR OG1 O N N 418 THR CG2 C N N 419 THR OXT O N N 420 THR H H N N 421 THR H2 H N N 422 THR HA H N N 423 THR HB H N N 424 THR HG1 H N N 425 THR HG21 H N N 426 THR HG22 H N N 427 THR HG23 H N N 428 THR HXT H N N 429 TYR N N N N 430 TYR CA C N S 431 TYR C C N N 432 TYR O O N N 433 TYR CB C N N 434 TYR CG C Y N 435 TYR CD1 C Y N 436 TYR CD2 C Y N 437 TYR CE1 C Y N 438 TYR CE2 C Y N 439 TYR CZ C Y N 440 TYR OH O N N 441 TYR OXT O N N 442 TYR H H N N 443 TYR H2 H N N 444 TYR HA H N N 445 TYR HB2 H N N 446 TYR HB3 H N N 447 TYR HD1 H N N 448 TYR HD2 H N N 449 TYR HE1 H N N 450 TYR HE2 H N N 451 TYR HH H N N 452 TYR HXT H N N 453 VAL N N N N 454 VAL CA C N S 455 VAL C C N N 456 VAL O O N N 457 VAL CB C N N 458 VAL CG1 C N N 459 VAL CG2 C N N 460 VAL OXT O N N 461 VAL H H N N 462 VAL H2 H N N 463 VAL HA H N N 464 VAL HB H N N 465 VAL HG11 H N N 466 VAL HG12 H N N 467 VAL HG13 H N N 468 VAL HG21 H N N 469 VAL HG22 H N N 470 VAL HG23 H N N 471 VAL HXT H N N 472 # loop_ _chem_comp_bond.comp_id _chem_comp_bond.atom_id_1 _chem_comp_bond.atom_id_2 _chem_comp_bond.value_order _chem_comp_bond.pdbx_aromatic_flag _chem_comp_bond.pdbx_stereo_config _chem_comp_bond.pdbx_ordinal ALA N CA sing N N 1 ALA N H sing N N 2 ALA N H2 sing N N 3 ALA CA C sing N N 4 ALA CA CB sing N N 5 ALA CA HA sing N N 6 ALA C O doub N N 7 ALA C OXT sing N N 8 ALA CB HB1 sing N N 9 ALA CB HB2 sing N N 10 ALA CB HB3 sing N N 11 ALA OXT HXT sing N N 12 ARG N CA sing N N 13 ARG N H sing N N 14 ARG N H2 sing N N 15 ARG CA C sing N N 16 ARG CA CB sing N N 17 ARG CA HA sing N N 18 ARG C O doub N N 19 ARG C OXT sing N N 20 ARG CB CG sing N N 21 ARG CB HB2 sing N N 22 ARG CB HB3 sing N N 23 ARG CG CD sing N N 24 ARG CG HG2 sing N N 25 ARG CG HG3 sing N N 26 ARG CD NE sing N N 27 ARG CD HD2 sing N N 28 ARG CD HD3 sing N N 29 ARG NE CZ sing N N 30 ARG NE HE sing N N 31 ARG CZ NH1 sing N N 32 ARG CZ NH2 doub N N 33 ARG NH1 HH11 sing N N 34 ARG NH1 HH12 sing N N 35 ARG NH2 HH21 sing N N 36 ARG NH2 HH22 sing N N 37 ARG OXT HXT sing N N 38 ASN N CA sing N N 39 ASN N H sing N N 40 ASN N H2 sing N N 41 ASN CA C sing N N 42 ASN CA CB sing N N 43 ASN CA HA sing N N 44 ASN C O doub N N 45 ASN C OXT sing N N 46 ASN CB CG sing N N 47 ASN CB HB2 sing N N 48 ASN CB HB3 sing N N 49 ASN CG OD1 doub N N 50 ASN CG ND2 sing N N 51 ASN ND2 HD21 sing N N 52 ASN ND2 HD22 sing N N 53 ASN OXT HXT sing N N 54 ASP N CA sing N N 55 ASP N H sing N N 56 ASP N H2 sing N N 57 ASP CA C sing N N 58 ASP CA CB sing N N 59 ASP CA HA sing N N 60 ASP C O doub N N 61 ASP C OXT sing N N 62 ASP CB CG sing N N 63 ASP CB HB2 sing N N 64 ASP CB HB3 sing N N 65 ASP CG OD1 doub N N 66 ASP CG OD2 sing N N 67 ASP OD2 HD2 sing N N 68 ASP OXT HXT sing N N 69 DA OP3 P sing N N 70 DA OP3 HOP3 sing N N 71 DA P OP1 doub N N 72 DA P OP2 sing N N 73 DA P "O5'" sing N N 74 DA OP2 HOP2 sing N N 75 DA "O5'" "C5'" sing N N 76 DA "C5'" "C4'" sing N N 77 DA "C5'" "H5'" sing N N 78 DA "C5'" "H5''" sing N N 79 DA "C4'" "O4'" sing N N 80 DA "C4'" "C3'" sing N N 81 DA "C4'" "H4'" sing N N 82 DA "O4'" "C1'" sing N N 83 DA "C3'" "O3'" sing N N 84 DA "C3'" "C2'" sing N N 85 DA "C3'" "H3'" sing N N 86 DA "O3'" "HO3'" sing N N 87 DA "C2'" "C1'" sing N N 88 DA "C2'" "H2'" sing N N 89 DA "C2'" "H2''" sing N N 90 DA "C1'" N9 sing N N 91 DA "C1'" "H1'" sing N N 92 DA N9 C8 sing Y N 93 DA N9 C4 sing Y N 94 DA C8 N7 doub Y N 95 DA C8 H8 sing N N 96 DA N7 C5 sing Y N 97 DA C5 C6 sing Y N 98 DA C5 C4 doub Y N 99 DA C6 N6 sing N N 100 DA C6 N1 doub Y N 101 DA N6 H61 sing N N 102 DA N6 H62 sing N N 103 DA N1 C2 sing Y N 104 DA C2 N3 doub Y N 105 DA C2 H2 sing N N 106 DA N3 C4 sing Y N 107 DC OP3 P sing N N 108 DC OP3 HOP3 sing N N 109 DC P OP1 doub N N 110 DC P OP2 sing N N 111 DC P "O5'" sing N N 112 DC OP2 HOP2 sing N N 113 DC "O5'" "C5'" sing N N 114 DC "C5'" "C4'" sing N N 115 DC "C5'" "H5'" sing N N 116 DC "C5'" "H5''" sing N N 117 DC "C4'" "O4'" sing N N 118 DC "C4'" "C3'" sing N N 119 DC "C4'" "H4'" sing N N 120 DC "O4'" "C1'" sing N N 121 DC "C3'" "O3'" sing N N 122 DC "C3'" "C2'" sing N N 123 DC "C3'" "H3'" sing N N 124 DC "O3'" "HO3'" sing N N 125 DC "C2'" "C1'" sing N N 126 DC "C2'" "H2'" sing N N 127 DC "C2'" "H2''" sing N N 128 DC "C1'" N1 sing N N 129 DC "C1'" "H1'" sing N N 130 DC N1 C2 sing N N 131 DC N1 C6 sing N N 132 DC C2 O2 doub N N 133 DC C2 N3 sing N N 134 DC N3 C4 doub N N 135 DC C4 N4 sing N N 136 DC C4 C5 sing N N 137 DC N4 H41 sing N N 138 DC N4 H42 sing N N 139 DC C5 C6 doub N N 140 DC C5 H5 sing N N 141 DC C6 H6 sing N N 142 DG OP3 P sing N N 143 DG OP3 HOP3 sing N N 144 DG P OP1 doub N N 145 DG P OP2 sing N N 146 DG P "O5'" sing N N 147 DG OP2 HOP2 sing N N 148 DG "O5'" "C5'" sing N N 149 DG "C5'" "C4'" sing N N 150 DG "C5'" "H5'" sing N N 151 DG "C5'" "H5''" sing N N 152 DG "C4'" "O4'" sing N N 153 DG "C4'" "C3'" sing N N 154 DG "C4'" "H4'" sing N N 155 DG "O4'" "C1'" sing N N 156 DG "C3'" "O3'" sing N N 157 DG "C3'" "C2'" sing N N 158 DG "C3'" "H3'" sing N N 159 DG "O3'" "HO3'" sing N N 160 DG "C2'" "C1'" sing N N 161 DG "C2'" "H2'" sing N N 162 DG "C2'" "H2''" sing N N 163 DG "C1'" N9 sing N N 164 DG "C1'" "H1'" sing N N 165 DG N9 C8 sing Y N 166 DG N9 C4 sing Y N 167 DG C8 N7 doub Y N 168 DG C8 H8 sing N N 169 DG N7 C5 sing Y N 170 DG C5 C6 sing N N 171 DG C5 C4 doub Y N 172 DG C6 O6 doub N N 173 DG C6 N1 sing N N 174 DG N1 C2 sing N N 175 DG N1 H1 sing N N 176 DG C2 N2 sing N N 177 DG C2 N3 doub N N 178 DG N2 H21 sing N N 179 DG N2 H22 sing N N 180 DG N3 C4 sing N N 181 DT OP3 P sing N N 182 DT OP3 HOP3 sing N N 183 DT P OP1 doub N N 184 DT P OP2 sing N N 185 DT P "O5'" sing N N 186 DT OP2 HOP2 sing N N 187 DT "O5'" "C5'" sing N N 188 DT "C5'" "C4'" sing N N 189 DT "C5'" "H5'" sing N N 190 DT "C5'" "H5''" sing N N 191 DT "C4'" "O4'" sing N N 192 DT "C4'" "C3'" sing N N 193 DT "C4'" "H4'" sing N N 194 DT "O4'" "C1'" sing N N 195 DT "C3'" "O3'" sing N N 196 DT "C3'" "C2'" sing N N 197 DT "C3'" "H3'" sing N N 198 DT "O3'" "HO3'" sing N N 199 DT "C2'" "C1'" sing N N 200 DT "C2'" "H2'" sing N N 201 DT "C2'" "H2''" sing N N 202 DT "C1'" N1 sing N N 203 DT "C1'" "H1'" sing N N 204 DT N1 C2 sing N N 205 DT N1 C6 sing N N 206 DT C2 O2 doub N N 207 DT C2 N3 sing N N 208 DT N3 C4 sing N N 209 DT N3 H3 sing N N 210 DT C4 O4 doub N N 211 DT C4 C5 sing N N 212 DT C5 C7 sing N N 213 DT C5 C6 doub N N 214 DT C7 H71 sing N N 215 DT C7 H72 sing N N 216 DT C7 H73 sing N N 217 DT C6 H6 sing N N 218 GLN N CA sing N N 219 GLN N H sing N N 220 GLN N H2 sing N N 221 GLN CA C sing N N 222 GLN CA CB sing N N 223 GLN CA HA sing N N 224 GLN C O doub N N 225 GLN C OXT sing N N 226 GLN CB CG sing N N 227 GLN CB HB2 sing N N 228 GLN CB HB3 sing N N 229 GLN CG CD sing N N 230 GLN CG HG2 sing N N 231 GLN CG HG3 sing N N 232 GLN CD OE1 doub N N 233 GLN CD NE2 sing N N 234 GLN NE2 HE21 sing N N 235 GLN NE2 HE22 sing N N 236 GLN OXT HXT sing N N 237 GLU N CA sing N N 238 GLU N H sing N N 239 GLU N H2 sing N N 240 GLU CA C sing N N 241 GLU CA CB sing N N 242 GLU CA HA sing N N 243 GLU C O doub N N 244 GLU C OXT sing N N 245 GLU CB CG sing N N 246 GLU CB HB2 sing N N 247 GLU CB HB3 sing N N 248 GLU CG CD sing N N 249 GLU CG HG2 sing N N 250 GLU CG HG3 sing N N 251 GLU CD OE1 doub N N 252 GLU CD OE2 sing N N 253 GLU OE2 HE2 sing N N 254 GLU OXT HXT sing N N 255 GLY N CA sing N N 256 GLY N H sing N N 257 GLY N H2 sing N N 258 GLY CA C sing N N 259 GLY CA HA2 sing N N 260 GLY CA HA3 sing N N 261 GLY C O doub N N 262 GLY C OXT sing N N 263 GLY OXT HXT sing N N 264 HIS N CA sing N N 265 HIS N H sing N N 266 HIS N H2 sing N N 267 HIS CA C sing N N 268 HIS CA CB sing N N 269 HIS CA HA sing N N 270 HIS C O doub N N 271 HIS C OXT sing N N 272 HIS CB CG sing N N 273 HIS CB HB2 sing N N 274 HIS CB HB3 sing N N 275 HIS CG ND1 sing Y N 276 HIS CG CD2 doub Y N 277 HIS ND1 CE1 doub Y N 278 HIS ND1 HD1 sing N N 279 HIS CD2 NE2 sing Y N 280 HIS CD2 HD2 sing N N 281 HIS CE1 NE2 sing Y N 282 HIS CE1 HE1 sing N N 283 HIS NE2 HE2 sing N N 284 HIS OXT HXT sing N N 285 ILE N CA sing N N 286 ILE N H sing N N 287 ILE N H2 sing N N 288 ILE CA C sing N N 289 ILE CA CB sing N N 290 ILE CA HA sing N N 291 ILE C O doub N N 292 ILE C OXT sing N N 293 ILE CB CG1 sing N N 294 ILE CB CG2 sing N N 295 ILE CB HB sing N N 296 ILE CG1 CD1 sing N N 297 ILE CG1 HG12 sing N N 298 ILE CG1 HG13 sing N N 299 ILE CG2 HG21 sing N N 300 ILE CG2 HG22 sing N N 301 ILE CG2 HG23 sing N N 302 ILE CD1 HD11 sing N N 303 ILE CD1 HD12 sing N N 304 ILE CD1 HD13 sing N N 305 ILE OXT HXT sing N N 306 LEU N CA sing N N 307 LEU N H sing N N 308 LEU N H2 sing N N 309 LEU CA C sing N N 310 LEU CA CB sing N N 311 LEU CA HA sing N N 312 LEU C O doub N N 313 LEU C OXT sing N N 314 LEU CB CG sing N N 315 LEU CB HB2 sing N N 316 LEU CB HB3 sing N N 317 LEU CG CD1 sing N N 318 LEU CG CD2 sing N N 319 LEU CG HG sing N N 320 LEU CD1 HD11 sing N N 321 LEU CD1 HD12 sing N N 322 LEU CD1 HD13 sing N N 323 LEU CD2 HD21 sing N N 324 LEU CD2 HD22 sing N N 325 LEU CD2 HD23 sing N N 326 LEU OXT HXT sing N N 327 LYS N CA sing N N 328 LYS N H sing N N 329 LYS N H2 sing N N 330 LYS CA C sing N N 331 LYS CA CB sing N N 332 LYS CA HA sing N N 333 LYS C O doub N N 334 LYS C OXT sing N N 335 LYS CB CG sing N N 336 LYS CB HB2 sing N N 337 LYS CB HB3 sing N N 338 LYS CG CD sing N N 339 LYS CG HG2 sing N N 340 LYS CG HG3 sing N N 341 LYS CD CE sing N N 342 LYS CD HD2 sing N N 343 LYS CD HD3 sing N N 344 LYS CE NZ sing N N 345 LYS CE HE2 sing N N 346 LYS CE HE3 sing N N 347 LYS NZ HZ1 sing N N 348 LYS NZ HZ2 sing N N 349 LYS NZ HZ3 sing N N 350 LYS OXT HXT sing N N 351 MET N CA sing N N 352 MET N H sing N N 353 MET N H2 sing N N 354 MET CA C sing N N 355 MET CA CB sing N N 356 MET CA HA sing N N 357 MET C O doub N N 358 MET C OXT sing N N 359 MET CB CG sing N N 360 MET CB HB2 sing N N 361 MET CB HB3 sing N N 362 MET CG SD sing N N 363 MET CG HG2 sing N N 364 MET CG HG3 sing N N 365 MET SD CE sing N N 366 MET CE HE1 sing N N 367 MET CE HE2 sing N N 368 MET CE HE3 sing N N 369 MET OXT HXT sing N N 370 PHE N CA sing N N 371 PHE N H sing N N 372 PHE N H2 sing N N 373 PHE CA C sing N N 374 PHE CA CB sing N N 375 PHE CA HA sing N N 376 PHE C O doub N N 377 PHE C OXT sing N N 378 PHE CB CG sing N N 379 PHE CB HB2 sing N N 380 PHE CB HB3 sing N N 381 PHE CG CD1 doub Y N 382 PHE CG CD2 sing Y N 383 PHE CD1 CE1 sing Y N 384 PHE CD1 HD1 sing N N 385 PHE CD2 CE2 doub Y N 386 PHE CD2 HD2 sing N N 387 PHE CE1 CZ doub Y N 388 PHE CE1 HE1 sing N N 389 PHE CE2 CZ sing Y N 390 PHE CE2 HE2 sing N N 391 PHE CZ HZ sing N N 392 PHE OXT HXT sing N N 393 SER N CA sing N N 394 SER N H sing N N 395 SER N H2 sing N N 396 SER CA C sing N N 397 SER CA CB sing N N 398 SER CA HA sing N N 399 SER C O doub N N 400 SER C OXT sing N N 401 SER CB OG sing N N 402 SER CB HB2 sing N N 403 SER CB HB3 sing N N 404 SER OG HG sing N N 405 SER OXT HXT sing N N 406 THR N CA sing N N 407 THR N H sing N N 408 THR N H2 sing N N 409 THR CA C sing N N 410 THR CA CB sing N N 411 THR CA HA sing N N 412 THR C O doub N N 413 THR C OXT sing N N 414 THR CB OG1 sing N N 415 THR CB CG2 sing N N 416 THR CB HB sing N N 417 THR OG1 HG1 sing N N 418 THR CG2 HG21 sing N N 419 THR CG2 HG22 sing N N 420 THR CG2 HG23 sing N N 421 THR OXT HXT sing N N 422 TYR N CA sing N N 423 TYR N H sing N N 424 TYR N H2 sing N N 425 TYR CA C sing N N 426 TYR CA CB sing N N 427 TYR CA HA sing N N 428 TYR C O doub N N 429 TYR C OXT sing N N 430 TYR CB CG sing N N 431 TYR CB HB2 sing N N 432 TYR CB HB3 sing N N 433 TYR CG CD1 doub Y N 434 TYR CG CD2 sing Y N 435 TYR CD1 CE1 sing Y N 436 TYR CD1 HD1 sing N N 437 TYR CD2 CE2 doub Y N 438 TYR CD2 HD2 sing N N 439 TYR CE1 CZ doub Y N 440 TYR CE1 HE1 sing N N 441 TYR CE2 CZ sing Y N 442 TYR CE2 HE2 sing N N 443 TYR CZ OH sing N N 444 TYR OH HH sing N N 445 TYR OXT HXT sing N N 446 VAL N CA sing N N 447 VAL N H sing N N 448 VAL N H2 sing N N 449 VAL CA C sing N N 450 VAL CA CB sing N N 451 VAL CA HA sing N N 452 VAL C O doub N N 453 VAL C OXT sing N N 454 VAL CB CG1 sing N N 455 VAL CB CG2 sing N N 456 VAL CB HB sing N N 457 VAL CG1 HG11 sing N N 458 VAL CG1 HG12 sing N N 459 VAL CG1 HG13 sing N N 460 VAL CG2 HG21 sing N N 461 VAL CG2 HG22 sing N N 462 VAL CG2 HG23 sing N N 463 VAL OXT HXT sing N N 464 # loop_ _ndb_struct_conf_na.entry_id _ndb_struct_conf_na.feature 4I8T 'double helix' 4I8T 'b-form double helix' # loop_ _ndb_struct_na_base_pair.model_number _ndb_struct_na_base_pair.i_label_asym_id _ndb_struct_na_base_pair.i_label_comp_id _ndb_struct_na_base_pair.i_label_seq_id _ndb_struct_na_base_pair.i_symmetry _ndb_struct_na_base_pair.j_label_asym_id _ndb_struct_na_base_pair.j_label_comp_id _ndb_struct_na_base_pair.j_label_seq_id _ndb_struct_na_base_pair.j_symmetry _ndb_struct_na_base_pair.shear _ndb_struct_na_base_pair.stretch _ndb_struct_na_base_pair.stagger _ndb_struct_na_base_pair.buckle _ndb_struct_na_base_pair.propeller _ndb_struct_na_base_pair.opening _ndb_struct_na_base_pair.pair_number _ndb_struct_na_base_pair.pair_name _ndb_struct_na_base_pair.i_auth_asym_id _ndb_struct_na_base_pair.i_auth_seq_id _ndb_struct_na_base_pair.i_PDB_ins_code _ndb_struct_na_base_pair.j_auth_asym_id _ndb_struct_na_base_pair.j_auth_seq_id _ndb_struct_na_base_pair.j_PDB_ins_code _ndb_struct_na_base_pair.hbond_type_28 _ndb_struct_na_base_pair.hbond_type_12 1 C DT 1 1_555 D DA 19 1_555 -0.437 -0.368 -0.223 -30.347 -13.755 -6.642 1 C_DT1:DA19_D C 1 ? D 19 ? 20 1 1 C DG 2 1_555 D DC 18 1_555 0.564 -0.074 0.214 -8.981 -10.737 4.786 2 C_DG2:DC18_D C 2 ? D 18 ? 19 1 1 C DT 3 1_555 D DA 17 1_555 0.019 -0.304 -0.118 3.020 -14.337 -12.085 3 C_DT3:DA17_D C 3 ? D 17 ? 20 1 1 C DT 4 1_555 D DA 16 1_555 -0.831 -0.410 0.297 -4.956 -21.708 -10.294 4 C_DT4:DA16_D C 4 ? D 16 ? 20 1 1 C DG 5 1_555 D DC 15 1_555 0.477 -0.335 -0.169 -7.244 -11.710 -2.628 5 C_DG5:DC15_D C 5 ? D 15 ? 19 1 1 C DA 6 1_555 D DT 14 1_555 0.366 -0.454 0.337 11.305 -14.280 -7.901 6 C_DA6:DT14_D C 6 ? D 14 ? 20 1 1 C DC 7 1_555 D DG 13 1_555 -1.593 0.032 0.834 8.710 -21.008 7.635 7 C_DC7:DG13_D C 7 ? D 13 ? ? 1 1 C DT 8 1_555 D DA 12 1_555 -0.624 -0.040 0.206 0.378 -13.205 -0.336 8 C_DT8:DA12_D C 8 ? D 12 ? 20 1 1 C DA 9 1_555 D DT 11 1_555 1.461 -0.018 0.783 -4.138 -11.642 4.258 9 C_DA9:DT11_D C 9 ? D 11 ? ? ? 1 C DT 10 1_555 D DA 10 1_555 -0.362 -0.525 0.952 -12.757 -12.907 1.651 10 C_DT10:DA10_D C 10 ? D 10 ? 20 1 1 C DA 11 1_555 D DT 9 1_555 0.929 -0.292 -0.090 -10.908 -14.729 -6.382 11 C_DA11:DT9_D C 11 ? D 9 ? 20 1 1 C DA 12 1_555 D DT 8 1_555 -0.637 -0.341 0.463 6.358 -16.109 2.458 12 C_DA12:DT8_D C 12 ? D 8 ? 20 1 1 C DT 13 1_555 D DA 7 1_555 -0.096 -0.570 0.141 0.418 -6.874 -4.592 13 C_DT13:DA7_D C 13 ? D 7 ? 20 1 1 C DC 14 1_555 D DG 6 1_555 0.591 -0.509 -0.053 5.160 -10.559 -2.387 14 C_DC14:DG6_D C 14 ? D 6 ? 19 1 1 C DA 15 1_555 D DT 5 1_555 1.428 0.003 -0.160 -3.947 -16.071 -3.473 15 C_DA15:DT5_D C 15 ? D 5 ? 20 1 1 C DC 16 1_555 D DG 4 1_555 -0.878 0.172 0.086 4.616 -8.851 10.961 16 C_DC16:DG4_D C 16 ? D 4 ? ? 1 1 C DA 17 1_555 D DT 3 1_555 0.363 -2.781 -0.785 11.282 21.912 105.228 17 C_DA17:DT3_D C 17 ? D 3 ? ? ? 1 C DC 18 1_555 D DG 2 1_555 -2.189 0.784 0.719 -5.882 -18.643 28.737 18 C_DC18:DG2_D C 18 ? D 2 ? ? 1 1 C DA 19 1_555 D DT 1 1_555 0.122 -0.201 0.545 8.930 -18.978 8.735 19 C_DA19:DT1_D C 19 ? D 1 ? 20 1 # loop_ _ndb_struct_na_base_pair_step.model_number _ndb_struct_na_base_pair_step.i_label_asym_id_1 _ndb_struct_na_base_pair_step.i_label_comp_id_1 _ndb_struct_na_base_pair_step.i_label_seq_id_1 _ndb_struct_na_base_pair_step.i_symmetry_1 _ndb_struct_na_base_pair_step.j_label_asym_id_1 _ndb_struct_na_base_pair_step.j_label_comp_id_1 _ndb_struct_na_base_pair_step.j_label_seq_id_1 _ndb_struct_na_base_pair_step.j_symmetry_1 _ndb_struct_na_base_pair_step.i_label_asym_id_2 _ndb_struct_na_base_pair_step.i_label_comp_id_2 _ndb_struct_na_base_pair_step.i_label_seq_id_2 _ndb_struct_na_base_pair_step.i_symmetry_2 _ndb_struct_na_base_pair_step.j_label_asym_id_2 _ndb_struct_na_base_pair_step.j_label_comp_id_2 _ndb_struct_na_base_pair_step.j_label_seq_id_2 _ndb_struct_na_base_pair_step.j_symmetry_2 _ndb_struct_na_base_pair_step.shift _ndb_struct_na_base_pair_step.slide _ndb_struct_na_base_pair_step.rise _ndb_struct_na_base_pair_step.tilt _ndb_struct_na_base_pair_step.roll _ndb_struct_na_base_pair_step.twist _ndb_struct_na_base_pair_step.x_displacement _ndb_struct_na_base_pair_step.y_displacement _ndb_struct_na_base_pair_step.helical_rise _ndb_struct_na_base_pair_step.inclination _ndb_struct_na_base_pair_step.tip _ndb_struct_na_base_pair_step.helical_twist _ndb_struct_na_base_pair_step.step_number _ndb_struct_na_base_pair_step.step_name _ndb_struct_na_base_pair_step.i_auth_asym_id_1 _ndb_struct_na_base_pair_step.i_auth_seq_id_1 _ndb_struct_na_base_pair_step.i_PDB_ins_code_1 _ndb_struct_na_base_pair_step.j_auth_asym_id_1 _ndb_struct_na_base_pair_step.j_auth_seq_id_1 _ndb_struct_na_base_pair_step.j_PDB_ins_code_1 _ndb_struct_na_base_pair_step.i_auth_asym_id_2 _ndb_struct_na_base_pair_step.i_auth_seq_id_2 _ndb_struct_na_base_pair_step.i_PDB_ins_code_2 _ndb_struct_na_base_pair_step.j_auth_asym_id_2 _ndb_struct_na_base_pair_step.j_auth_seq_id_2 _ndb_struct_na_base_pair_step.j_PDB_ins_code_2 1 C DT 1 1_555 D DA 19 1_555 C DG 2 1_555 D DC 18 1_555 0.628 0.911 3.054 -5.520 6.792 39.602 0.598 -1.490 3.052 9.879 8.029 40.520 1 CC_DT1DG2:DC18DA19_DD C 1 ? D 19 ? C 2 ? D 18 ? 1 C DG 2 1_555 D DC 18 1_555 C DT 3 1_555 D DA 17 1_555 -0.317 -0.639 3.027 0.617 7.221 27.006 -2.868 0.788 2.759 15.121 -1.292 27.944 2 CC_DG2DT3:DA17DC18_DD C 2 ? D 18 ? C 3 ? D 17 ? 1 C DT 3 1_555 D DA 17 1_555 C DT 4 1_555 D DA 16 1_555 -0.391 -0.147 3.529 -3.111 -2.360 33.707 0.159 0.129 3.552 -4.052 5.343 33.926 3 CC_DT3DT4:DA16DA17_DD C 3 ? D 17 ? C 4 ? D 16 ? 1 C DT 4 1_555 D DA 16 1_555 C DG 5 1_555 D DC 15 1_555 0.568 0.282 3.541 4.075 8.231 37.699 -0.684 -0.306 3.563 12.511 -6.195 38.762 4 CC_DT4DG5:DC15DA16_DD C 4 ? D 16 ? C 5 ? D 15 ? 1 C DG 5 1_555 D DC 15 1_555 C DA 6 1_555 D DT 14 1_555 -0.470 0.127 2.882 -5.571 3.699 31.351 -0.367 -0.048 2.916 6.749 10.164 32.039 5 CC_DG5DA6:DT14DC15_DD C 5 ? D 15 ? C 6 ? D 14 ? 1 C DA 6 1_555 D DT 14 1_555 C DC 7 1_555 D DG 13 1_555 0.820 -1.199 3.137 -4.162 1.582 26.713 -2.934 -2.732 2.904 3.395 8.929 27.075 6 CC_DA6DC7:DG13DT14_DD C 6 ? D 14 ? C 7 ? D 13 ? 1 C DC 7 1_555 D DG 13 1_555 C DT 8 1_555 D DA 12 1_555 -0.218 -0.539 3.510 3.108 -6.485 39.052 0.026 0.714 3.525 -9.603 -4.601 39.683 7 CC_DC7DT8:DA12DG13_DD C 7 ? D 13 ? C 8 ? D 12 ? 1 C DT 8 1_555 D DA 12 1_555 C DA 9 1_555 D DT 11 1_555 -0.257 -0.099 3.493 -4.965 -6.405 46.877 0.432 -0.111 3.486 -7.981 6.187 47.533 8 CC_DT8DA9:DT11DA12_DD C 8 ? D 12 ? C 9 ? D 11 ? 1 C DA 9 1_555 D DT 11 1_555 C DT 10 1_555 D DA 10 1_555 -0.121 -1.032 3.461 -0.678 -8.634 28.445 -0.007 0.079 3.613 -17.076 1.342 29.708 9 CC_DA9DT10:DA10DT11_DD C 9 ? D 11 ? C 10 ? D 10 ? 1 C DT 10 1_555 D DA 10 1_555 C DA 11 1_555 D DT 9 1_555 -0.665 -0.209 3.286 6.739 4.289 37.805 -0.837 1.825 3.085 6.530 -10.261 38.610 10 CC_DT10DA11:DT9DA10_DD C 10 ? D 10 ? C 11 ? D 9 ? 1 C DA 11 1_555 D DT 9 1_555 C DA 12 1_555 D DT 8 1_555 0.144 -0.325 2.785 -4.121 4.165 26.864 -1.544 -1.154 2.654 8.833 8.739 27.484 11 CC_DA11DA12:DT8DT9_DD C 11 ? D 9 ? C 12 ? D 8 ? 1 C DA 12 1_555 D DT 8 1_555 C DT 13 1_555 D DA 7 1_555 0.237 -1.143 3.579 1.816 -1.197 33.170 -1.777 -0.079 3.625 -2.094 -3.177 33.240 12 CC_DA12DT13:DA7DT8_DD C 12 ? D 8 ? C 13 ? D 7 ? 1 C DT 13 1_555 D DA 7 1_555 C DC 14 1_555 D DG 6 1_555 0.301 -0.421 3.169 4.795 1.619 35.934 -0.897 0.170 3.160 2.609 -7.724 36.277 13 CC_DT13DC14:DG6DA7_DD C 13 ? D 7 ? C 14 ? D 6 ? 1 C DC 14 1_555 D DG 6 1_555 C DA 15 1_555 D DT 5 1_555 0.249 -0.177 3.481 7.518 13.318 38.172 -1.803 0.520 3.238 19.439 -10.973 41.016 14 CC_DC14DA15:DT5DG6_DD C 14 ? D 6 ? C 15 ? D 5 ? 1 C DA 15 1_555 D DT 5 1_555 C DC 16 1_555 D DG 4 1_555 0.938 0.271 3.111 -2.007 -3.574 25.556 1.532 -2.615 2.965 -8.014 4.501 25.877 15 CC_DA15DC16:DG4DT5_DD C 15 ? D 5 ? C 16 ? D 4 ? 1 C DC 16 1_555 D DG 4 1_555 C DA 17 1_555 D DT 3 1_555 0.610 3.745 -1.217 172.649 -14.776 87.716 1.840 -0.699 -0.636 -7.476 -87.351 175.156 16 CC_DC16DA17:DT3DG4_DD C 16 ? D 4 ? C 17 ? D 3 ? 1 C DA 17 1_555 D DT 3 1_555 C DC 18 1_555 D DG 2 1_555 -0.960 -3.087 -0.080 142.421 -106.584 110.409 -1.499 0.539 0.551 -53.405 -71.362 178.794 17 CC_DA17DC18:DG2DT3_DD C 17 ? D 3 ? C 18 ? D 2 ? 1 C DC 18 1_555 D DG 2 1_555 C DA 19 1_555 D DT 1 1_555 -0.756 0.971 3.203 -2.467 0.334 50.952 1.105 0.709 3.240 0.389 2.866 51.009 18 CC_DC18DA19:DT1DG2_DD C 18 ? D 2 ? C 19 ? D 1 ? # _pdbx_initial_refinement_model.id 1 _pdbx_initial_refinement_model.entity_id_list ? _pdbx_initial_refinement_model.type 'experimental model' _pdbx_initial_refinement_model.source_name PDB _pdbx_initial_refinement_model.accession_code 3G5G _pdbx_initial_refinement_model.details 'pdb entry 3G5G' #