HEADER STRUCTURAL GENOMICS, UNKNOWN FUNCTION 04-DEC-12 4I95 TITLE CRYSTAL STRUCTURE OF A LIPOCALIN-LIKE PROTEIN (BACEGG_00036) FROM TITLE 2 BACTEROIDES EGGERTHII DSM 20697 AT 1.81 A RESOLUTION COMPND MOL_ID: 1; COMPND 2 MOLECULE: PUTATIVE UNCHARACTERIZED PROTEIN; COMPND 3 CHAIN: A, B; COMPND 4 ENGINEERED: YES SOURCE MOL_ID: 1; SOURCE 2 ORGANISM_SCIENTIFIC: BACTEROIDES EGGERTHII; SOURCE 3 ORGANISM_TAXID: 483216; SOURCE 4 STRAIN: DSM 20697; SOURCE 5 GENE: BACEGG_00036; SOURCE 6 EXPRESSION_SYSTEM: ESCHERICHIA COLI; SOURCE 7 EXPRESSION_SYSTEM_TAXID: 562; SOURCE 8 EXPRESSION_SYSTEM_STRAIN: PB1; SOURCE 9 EXPRESSION_SYSTEM_VECTOR_TYPE: PLASMID; SOURCE 10 EXPRESSION_SYSTEM_PLASMID: SPEEDET KEYWDS LIPOCALIN-LIKE DOMAIN OF PF13924 FAMILY, STRUCTURAL GENOMICS, JOINT KEYWDS 2 CENTER FOR STRUCTURAL GENOMICS, JCSG, PROTEIN STRUCTURE INITIATIVE, KEYWDS 3 PSI-BIOLOGY, UNKNOWN FUNCTION EXPDTA X-RAY DIFFRACTION AUTHOR JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) REVDAT 5 30-OCT-24 4I95 1 REMARK REVDAT 4 01-FEB-23 4I95 1 SEQADV LINK REVDAT 3 15-NOV-17 4I95 1 REMARK REVDAT 2 24-DEC-14 4I95 1 TITLE REVDAT 1 26-DEC-12 4I95 0 JRNL AUTH JOINT CENTER FOR STRUCTURAL GENOMICS (JCSG) JRNL TITL CRYSTAL STRUCTURE OF A HYPOTHETICAL PROTEIN (BACEGG_00036) JRNL TITL 2 FROM BACTEROIDES EGGERTHII DSM 20697 AT 1.81 A RESOLUTION JRNL REF TO BE PUBLISHED JRNL REFN REMARK 2 REMARK 2 RESOLUTION. 1.81 ANGSTROMS. REMARK 3 REMARK 3 REFINEMENT. REMARK 3 PROGRAM : REFMAC 5.7.0032 REMARK 3 AUTHORS : MURSHUDOV,SKUBAK,LEBEDEV,PANNU,STEINER, REMARK 3 : NICHOLLS,WINN,LONG,VAGIN REMARK 3 REMARK 3 REFINEMENT TARGET : MAXIMUM LIKELIHOOD WITH PHASES REMARK 3 REMARK 3 DATA USED IN REFINEMENT. REMARK 3 RESOLUTION RANGE HIGH (ANGSTROMS) : 1.81 REMARK 3 RESOLUTION RANGE LOW (ANGSTROMS) : 48.33 REMARK 3 DATA CUTOFF (SIGMA(F)) : 0.000 REMARK 3 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 3 NUMBER OF REFLECTIONS : 33450 REMARK 3 REMARK 3 FIT TO DATA USED IN REFINEMENT. REMARK 3 CROSS-VALIDATION METHOD : THROUGHOUT REMARK 3 FREE R VALUE TEST SET SELECTION : RANDOM REMARK 3 R VALUE (WORKING + TEST SET) : 0.175 REMARK 3 R VALUE (WORKING SET) : 0.174 REMARK 3 FREE R VALUE : 0.204 REMARK 3 FREE R VALUE TEST SET SIZE (%) : 5.100 REMARK 3 FREE R VALUE TEST SET COUNT : 1693 REMARK 3 REMARK 3 FIT IN THE HIGHEST RESOLUTION BIN. REMARK 3 TOTAL NUMBER OF BINS USED : 20 REMARK 3 BIN RESOLUTION RANGE HIGH (A) : 1.81 REMARK 3 BIN RESOLUTION RANGE LOW (A) : 1.86 REMARK 3 REFLECTION IN BIN (WORKING SET) : 2295 REMARK 3 BIN COMPLETENESS (WORKING+TEST) (%) : 99.96 REMARK 3 BIN R VALUE (WORKING SET) : 0.2630 REMARK 3 BIN FREE R VALUE SET COUNT : 127 REMARK 3 BIN FREE R VALUE : 0.2900 REMARK 3 REMARK 3 NUMBER OF NON-HYDROGEN ATOMS USED IN REFINEMENT. REMARK 3 PROTEIN ATOMS : 2208 REMARK 3 NUCLEIC ACID ATOMS : 0 REMARK 3 HETEROGEN ATOMS : 16 REMARK 3 SOLVENT ATOMS : 293 REMARK 3 REMARK 3 B VALUES. REMARK 3 FROM WILSON PLOT (A**2) : 21.92 REMARK 3 MEAN B VALUE (OVERALL, A**2) : 26.98 REMARK 3 OVERALL ANISOTROPIC B VALUE. REMARK 3 B11 (A**2) : -0.35000 REMARK 3 B22 (A**2) : -0.35000 REMARK 3 B33 (A**2) : 1.12000 REMARK 3 B12 (A**2) : -0.35000 REMARK 3 B13 (A**2) : 0.00000 REMARK 3 B23 (A**2) : 0.00000 REMARK 3 REMARK 3 ESTIMATED OVERALL COORDINATE ERROR. REMARK 3 ESU BASED ON R VALUE (A): 0.111 REMARK 3 ESU BASED ON FREE R VALUE (A): 0.107 REMARK 3 ESU BASED ON MAXIMUM LIKELIHOOD (A): 0.070 REMARK 3 ESU FOR B VALUES BASED ON MAXIMUM LIKELIHOOD (A**2): 4.392 REMARK 3 REMARK 3 CORRELATION COEFFICIENTS. REMARK 3 CORRELATION COEFFICIENT FO-FC : 0.969 REMARK 3 CORRELATION COEFFICIENT FO-FC FREE : 0.962 REMARK 3 REMARK 3 RMS DEVIATIONS FROM IDEAL VALUES COUNT RMS WEIGHT REMARK 3 BOND LENGTHS REFINED ATOMS (A): 2348 ; 0.016 ; 0.019 REMARK 3 BOND LENGTHS OTHERS (A): 2209 ; 0.005 ; 0.020 REMARK 3 BOND ANGLES REFINED ATOMS (DEGREES): 3212 ; 1.765 ; 1.965 REMARK 3 BOND ANGLES OTHERS (DEGREES): 5115 ; 1.044 ; 3.000 REMARK 3 TORSION ANGLES, PERIOD 1 (DEGREES): 298 ; 5.266 ; 5.000 REMARK 3 TORSION ANGLES, PERIOD 2 (DEGREES): 114 ;28.823 ;24.561 REMARK 3 TORSION ANGLES, PERIOD 3 (DEGREES): 372 ;11.616 ;15.000 REMARK 3 TORSION ANGLES, PERIOD 4 (DEGREES): 11 ;16.387 ;15.000 REMARK 3 CHIRAL-CENTER RESTRAINTS (A**3): 346 ; 0.112 ; 0.200 REMARK 3 GENERAL PLANES REFINED ATOMS (A): 2678 ; 0.010 ; 0.021 REMARK 3 GENERAL PLANES OTHERS (A): 545 ; 0.004 ; 0.020 REMARK 3 NON-BONDED CONTACTS REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED CONTACTS OTHERS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 NON-BONDED TORSION OTHERS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 H-BOND (X...Y) OTHERS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 POTENTIAL METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY VDW OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY H-BOND OTHERS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION REFINED ATOMS (A): NULL ; NULL ; NULL REMARK 3 SYMMETRY METAL-ION OTHERS (A): NULL ; NULL ; NULL REMARK 3 REMARK 3 ISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 MAIN-CHAIN BOND REFINED ATOMS (A**2): 1120 ; 2.639 ; 2.897 REMARK 3 MAIN-CHAIN BOND OTHER ATOMS (A**2): 1119 ; 2.640 ; 2.897 REMARK 3 MAIN-CHAIN ANGLE REFINED ATOMS (A**2): 1403 ; 3.637 ; 5.381 REMARK 3 MAIN-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN BOND OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SIDE-CHAIN ANGLE OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B REFINED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 LONG RANGE B OTHER ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 ANISOTROPIC THERMAL FACTOR RESTRAINTS. COUNT RMS WEIGHT REMARK 3 RIGID-BOND RESTRAINTS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; FREE ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 SPHERICITY; BONDED ATOMS (A**2): NULL ; NULL ; NULL REMARK 3 REMARK 3 NCS RESTRAINTS STATISTICS REMARK 3 NUMBER OF DIFFERENT NCS GROUPS : NULL REMARK 3 REMARK 3 TLS DETAILS REMARK 3 NUMBER OF TLS GROUPS : 2 REMARK 3 REMARK 3 TLS GROUP : 1 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : A 27 A 163 REMARK 3 ORIGIN FOR THE GROUP (A): 31.9317 -0.5651 17.1439 REMARK 3 T TENSOR REMARK 3 T11: 0.0143 T22: 0.0110 REMARK 3 T33: 0.0072 T12: -0.0004 REMARK 3 T13: 0.0034 T23: -0.0045 REMARK 3 L TENSOR REMARK 3 L11: 1.8631 L22: 1.8804 REMARK 3 L33: 1.4446 L12: 0.3153 REMARK 3 L13: 0.0535 L23: -0.4406 REMARK 3 S TENSOR REMARK 3 S11: -0.0436 S12: 0.1236 S13: -0.0182 REMARK 3 S21: -0.1213 S22: 0.0422 S23: -0.0988 REMARK 3 S31: 0.0169 S32: 0.0081 S33: 0.0014 REMARK 3 REMARK 3 TLS GROUP : 2 REMARK 3 NUMBER OF COMPONENTS GROUP : 1 REMARK 3 COMPONENTS C SSSEQI TO C SSSEQI REMARK 3 RESIDUE RANGE : B 27 B 163 REMARK 3 ORIGIN FOR THE GROUP (A): 36.0477 1.9030 40.2128 REMARK 3 T TENSOR REMARK 3 T11: 0.0205 T22: 0.0309 REMARK 3 T33: 0.0236 T12: 0.0105 REMARK 3 T13: -0.0125 T23: -0.0014 REMARK 3 L TENSOR REMARK 3 L11: 1.8375 L22: 1.6770 REMARK 3 L33: 1.2180 L12: -0.3681 REMARK 3 L13: -0.4704 L23: 0.2283 REMARK 3 S TENSOR REMARK 3 S11: -0.0142 S12: -0.1899 S13: -0.0938 REMARK 3 S21: 0.0870 S22: 0.0347 S23: -0.0860 REMARK 3 S31: -0.0300 S32: 0.0580 S33: -0.0205 REMARK 3 REMARK 3 BULK SOLVENT MODELLING. REMARK 3 METHOD USED : BABINET MODEL WITH MASK REMARK 3 PARAMETERS FOR MASK CALCULATION REMARK 3 VDW PROBE RADIUS : 1.20 REMARK 3 ION PROBE RADIUS : 0.80 REMARK 3 SHRINKAGE RADIUS : 0.80 REMARK 3 REMARK 3 OTHER REFINEMENT REMARKS: 1.HYDROGENS HAVE BEEN ADDED IN THE REMARK 3 RIDING POSITIONS. 2.A MET-INHIBITION PROTOCOL WAS USED FOR REMARK 3 SELENOMETHIONINE INCORPORATION DURING PROTEIN EXPRESSION. THE REMARK 3 OCCUPANCY OF THE SE ATOMS IN THE MSE RESIDUES WAS REDUCED TO REMARK 3 0.75 FOR THE REDUCED SCATTERING POWER DUE TO PARTIAL S-MET REMARK 3 INCORPORATION. 3.ATOM RECORDS CONTAIN SUM OF TLS AND RESIDUAL B REMARK 3 FACTORS. ANISOU RECORD CONTAINS SUM OF TLS AND RESIDUAL U REMARK 3 FACTORS. 4.WATERS WERE EXCLUDED FROM AUTOMATIC TLS ASSIGNMENT. REMARK 3 5.AN UNIDENTIFIED LIGAND (UNL) HAS BEEN MODELED AT THE PUTATIVE REMARK 3 ACTIVE SITE IN BOTH MONOMERS. REMARK 4 REMARK 4 4I95 COMPLIES WITH FORMAT V. 3.30, 13-JUL-11 REMARK 100 REMARK 100 THIS ENTRY HAS BEEN PROCESSED BY RCSB ON 06-DEC-12. REMARK 100 THE DEPOSITION ID IS D_1000076460. REMARK 200 REMARK 200 EXPERIMENTAL DETAILS REMARK 200 EXPERIMENT TYPE : X-RAY DIFFRACTION REMARK 200 DATE OF DATA COLLECTION : 16-JUL-12 REMARK 200 TEMPERATURE (KELVIN) : 100 REMARK 200 PH : 6.0 REMARK 200 NUMBER OF CRYSTALS USED : 1 REMARK 200 REMARK 200 SYNCHROTRON (Y/N) : Y REMARK 200 RADIATION SOURCE : SSRL REMARK 200 BEAMLINE : BL12-2 REMARK 200 X-RAY GENERATOR MODEL : NULL REMARK 200 MONOCHROMATIC OR LAUE (M/L) : M REMARK 200 WAVELENGTH OR RANGE (A) : 0.9795 REMARK 200 MONOCHROMATOR : DOUBLE CRYSTAL SI(111) REMARK 200 OPTICS : RHODIUM-COATED VERTICAL AND REMARK 200 HORIZONTAL FOCUSING MIRRORS; REMARK 200 LIQUID-NITROGEN COOLED DOUBLE REMARK 200 CRYSTAL SI(111) MONOCHROMATOR REMARK 200 REMARK 200 DETECTOR TYPE : PIXEL REMARK 200 DETECTOR MANUFACTURER : DECTRIS PILATUS 6M REMARK 200 INTENSITY-INTEGRATION SOFTWARE : XDS REMARK 200 DATA SCALING SOFTWARE : XSCALE MARCH 15, 2012 REMARK 200 REMARK 200 NUMBER OF UNIQUE REFLECTIONS : 33477 REMARK 200 RESOLUTION RANGE HIGH (A) : 1.810 REMARK 200 RESOLUTION RANGE LOW (A) : 48.331 REMARK 200 REJECTION CRITERIA (SIGMA(I)) : -3.000 REMARK 200 REMARK 200 OVERALL. REMARK 200 COMPLETENESS FOR RANGE (%) : 100.0 REMARK 200 DATA REDUNDANCY : NULL REMARK 200 R MERGE (I) : 0.19300 REMARK 200 R SYM (I) : NULL REMARK 200 FOR THE DATA SET : 15.7400 REMARK 200 REMARK 200 IN THE HIGHEST RESOLUTION SHELL. REMARK 200 HIGHEST RESOLUTION SHELL, RANGE HIGH (A) : 1.81 REMARK 200 HIGHEST RESOLUTION SHELL, RANGE LOW (A) : 1.87 REMARK 200 COMPLETENESS FOR SHELL (%) : 100.0 REMARK 200 DATA REDUNDANCY IN SHELL : NULL REMARK 200 R MERGE FOR SHELL (I) : 0.01600 REMARK 200 R SYM FOR SHELL (I) : NULL REMARK 200 FOR SHELL : 2.900 REMARK 200 REMARK 200 DIFFRACTION PROTOCOL: SINGLE WAVELENGTH REMARK 200 METHOD USED TO DETERMINE THE STRUCTURE: SAD REMARK 200 SOFTWARE USED: SHELX, SHARP, SHELXD REMARK 200 STARTING MODEL: NULL REMARK 200 REMARK 200 REMARK: NULL REMARK 280 REMARK 280 CRYSTAL REMARK 280 SOLVENT CONTENT, VS (%): 54.32 REMARK 280 MATTHEWS COEFFICIENT, VM (ANGSTROMS**3/DA): 2.69 REMARK 280 REMARK 280 CRYSTALLIZATION CONDITIONS: 1.0000M LITHIUM CHLORIDE, 20.0000% REMARK 280 POLYETHYLENE GLYCOL 6000, 0.1M MES PH 6.0, NANODROP, VAPOR REMARK 280 DIFFUSION, SITTING DROP, TEMPERATURE 277K REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY REMARK 290 SYMMETRY OPERATORS FOR SPACE GROUP: P 63 2 2 REMARK 290 REMARK 290 SYMOP SYMMETRY REMARK 290 NNNMMM OPERATOR REMARK 290 1555 X,Y,Z REMARK 290 2555 -Y,X-Y,Z REMARK 290 3555 -X+Y,-X,Z REMARK 290 4555 -X,-Y,Z+1/2 REMARK 290 5555 Y,-X+Y,Z+1/2 REMARK 290 6555 X-Y,X,Z+1/2 REMARK 290 7555 Y,X,-Z REMARK 290 8555 X-Y,-Y,-Z REMARK 290 9555 -X,-X+Y,-Z REMARK 290 10555 -Y,-X,-Z+1/2 REMARK 290 11555 -X+Y,Y,-Z+1/2 REMARK 290 12555 X,X-Y,-Z+1/2 REMARK 290 REMARK 290 WHERE NNN -> OPERATOR NUMBER REMARK 290 MMM -> TRANSLATION VECTOR REMARK 290 REMARK 290 CRYSTALLOGRAPHIC SYMMETRY TRANSFORMATIONS REMARK 290 THE FOLLOWING TRANSFORMATIONS OPERATE ON THE ATOM/HETATM REMARK 290 RECORDS IN THIS ENTRY TO PRODUCE CRYSTALLOGRAPHICALLY REMARK 290 RELATED MOLECULES. REMARK 290 SMTRY1 1 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 1 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 1 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 2 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 2 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 3 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 3 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 3 0.000000 0.000000 1.000000 0.00000 REMARK 290 SMTRY1 4 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 4 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 4 0.000000 0.000000 1.000000 57.48750 REMARK 290 SMTRY1 5 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 5 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 5 0.000000 0.000000 1.000000 57.48750 REMARK 290 SMTRY1 6 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 6 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 6 0.000000 0.000000 1.000000 57.48750 REMARK 290 SMTRY1 7 -0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 7 0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 7 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 8 1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 8 0.000000 -1.000000 0.000000 0.00000 REMARK 290 SMTRY3 8 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 9 -0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 9 -0.866025 0.500000 0.000000 0.00000 REMARK 290 SMTRY3 9 0.000000 0.000000 -1.000000 0.00000 REMARK 290 SMTRY1 10 0.500000 -0.866025 0.000000 0.00000 REMARK 290 SMTRY2 10 -0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 10 0.000000 0.000000 -1.000000 57.48750 REMARK 290 SMTRY1 11 -1.000000 0.000000 0.000000 0.00000 REMARK 290 SMTRY2 11 0.000000 1.000000 0.000000 0.00000 REMARK 290 SMTRY3 11 0.000000 0.000000 -1.000000 57.48750 REMARK 290 SMTRY1 12 0.500000 0.866025 0.000000 0.00000 REMARK 290 SMTRY2 12 0.866025 -0.500000 0.000000 0.00000 REMARK 290 SMTRY3 12 0.000000 0.000000 -1.000000 57.48750 REMARK 290 REMARK 290 REMARK: NULL REMARK 300 REMARK 300 BIOMOLECULE: 1 REMARK 300 SEE REMARK 350 FOR THE AUTHOR PROVIDED AND/OR PROGRAM REMARK 300 GENERATED ASSEMBLY INFORMATION FOR THE STRUCTURE IN REMARK 300 THIS ENTRY. THE REMARK MAY ALSO PROVIDE INFORMATION ON REMARK 300 BURIED SURFACE AREA. REMARK 350 REMARK 350 COORDINATES FOR A COMPLETE MULTIMER REPRESENTING THE KNOWN REMARK 350 BIOLOGICALLY SIGNIFICANT OLIGOMERIZATION STATE OF THE REMARK 350 MOLECULE CAN BE GENERATED BY APPLYING BIOMT TRANSFORMATIONS REMARK 350 GIVEN BELOW. BOTH NON-CRYSTALLOGRAPHIC AND REMARK 350 CRYSTALLOGRAPHIC OPERATIONS ARE GIVEN. REMARK 350 REMARK 350 BIOMOLECULE: 1 REMARK 350 AUTHOR DETERMINED BIOLOGICAL UNIT: TETRAMERIC REMARK 350 SOFTWARE DETERMINED QUATERNARY STRUCTURE: TETRAMERIC REMARK 350 SOFTWARE USED: PISA REMARK 350 TOTAL BURIED SURFACE AREA: 13110 ANGSTROM**2 REMARK 350 SURFACE AREA OF THE COMPLEX: 25890 ANGSTROM**2 REMARK 350 CHANGE IN SOLVENT FREE ENERGY: -60.0 KCAL/MOL REMARK 350 APPLY THE FOLLOWING TO CHAINS: A, B REMARK 350 BIOMT1 1 1.000000 0.000000 0.000000 0.00000 REMARK 350 BIOMT2 1 0.000000 1.000000 0.000000 0.00000 REMARK 350 BIOMT3 1 0.000000 0.000000 1.000000 0.00000 REMARK 350 BIOMT1 2 0.500000 0.866025 0.000000 0.00000 REMARK 350 BIOMT2 2 0.866025 -0.500000 0.000000 0.00000 REMARK 350 BIOMT3 2 0.000000 0.000000 -1.000000 57.48750 REMARK 465 REMARK 465 MISSING RESIDUES REMARK 465 THE FOLLOWING RESIDUES WERE NOT LOCATED IN THE REMARK 465 EXPERIMENT. (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 465 IDENTIFIER; SSSEQ=SEQUENCE NUMBER; I=INSERTION CODE.) REMARK 465 REMARK 465 M RES C SSSEQI REMARK 465 GLY A 0 REMARK 465 GLN A 23 REMARK 465 ASP A 24 REMARK 465 LYS A 25 REMARK 465 ALA A 26 REMARK 465 GLY B 0 REMARK 465 GLN B 23 REMARK 465 ASP B 24 REMARK 465 LYS B 25 REMARK 465 ALA B 26 REMARK 470 REMARK 470 MISSING ATOM REMARK 470 THE FOLLOWING RESIDUES HAVE MISSING ATOMS (M=MODEL NUMBER; REMARK 470 RES=RESIDUE NAME; C=CHAIN IDENTIFIER; SSEQ=SEQUENCE NUMBER; REMARK 470 I=INSERTION CODE): REMARK 470 M RES CSSEQI ATOMS REMARK 470 ARG A 67 NE CZ NH1 NH2 REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: COVALENT BOND ANGLES REMARK 500 REMARK 500 THE STEREOCHEMICAL PARAMETERS OF THE FOLLOWING RESIDUES REMARK 500 HAVE VALUES WHICH DEVIATE FROM EXPECTED VALUES BY MORE REMARK 500 THAN 6*RMSD (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN REMARK 500 IDENTIFIER; SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT: (10X,I3,1X,A3,1X,A1,I4,A1,3(1X,A4,2X),12X,F5.1) REMARK 500 REMARK 500 EXPECTED VALUES PROTEIN: ENGH AND HUBER, 1999 REMARK 500 EXPECTED VALUES NUCLEIC ACID: CLOWNEY ET AL 1996 REMARK 500 REMARK 500 M RES CSSEQI ATM1 ATM2 ATM3 REMARK 500 ASP A 65 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 ASP B 65 CB - CG - OD1 ANGL. DEV. = 6.5 DEGREES REMARK 500 REMARK 500 REMARK: NULL REMARK 500 REMARK 500 GEOMETRY AND STEREOCHEMISTRY REMARK 500 SUBTOPIC: TORSION ANGLES REMARK 500 REMARK 500 TORSION ANGLES OUTSIDE THE EXPECTED RAMACHANDRAN REGIONS: REMARK 500 (M=MODEL NUMBER; RES=RESIDUE NAME; C=CHAIN IDENTIFIER; REMARK 500 SSEQ=SEQUENCE NUMBER; I=INSERTION CODE). REMARK 500 REMARK 500 STANDARD TABLE: REMARK 500 FORMAT:(10X,I3,1X,A3,1X,A1,I4,A1,4X,F7.2,3X,F7.2) REMARK 500 REMARK 500 EXPECTED VALUES: GJ KLEYWEGT AND TA JONES (1996). PHI/PSI- REMARK 500 CHOLOGY: RAMACHANDRAN REVISITED. STRUCTURE 4, 1395 - 1400 REMARK 500 REMARK 500 M RES CSSEQI PSI PHI REMARK 500 SER A 56 -148.52 -122.99 REMARK 500 LEU A 140 -52.10 -123.30 REMARK 500 SER B 56 -147.35 -121.87 REMARK 500 LEU B 140 -52.98 -123.47 REMARK 500 REMARK 500 REMARK: NULL REMARK 900 REMARK 900 RELATED ENTRIES REMARK 900 RELATED ID: JCSG-417669 RELATED DB: TARGETTRACK REMARK 999 REMARK 999 SEQUENCE REMARK 999 THIS CONSTRUCT (RESIDUES 23-163) WAS EXPRESSED WITH A PURIFICATION REMARK 999 TAG MGSDKIHHHHHHENLYFQG. THE TAG WAS REMOVED WITH TEV PROTEASE REMARK 999 LEAVING ONLY A GLYCINE (0) FOLLOWED BY THE TARGET SEQUENCE. DBREF 4I95 A 23 163 UNP B7ACC1 B7ACC1_9BACE 23 163 DBREF 4I95 B 23 163 UNP B7ACC1 B7ACC1_9BACE 23 163 SEQADV 4I95 GLY A 0 UNP B7ACC1 EXPRESSION TAG SEQADV 4I95 GLY B 0 UNP B7ACC1 EXPRESSION TAG SEQRES 1 A 142 GLY GLN ASP LYS ALA ALA PHE GLU PRO ALA HIS LEU GLN SEQRES 2 A 142 GLY ILE TRP GLN LEU CYS HIS TYR VAL SER GLU ASN PRO SEQRES 3 A 142 ASP ILE PRO GLY VAL LEU LYS PRO SER ASN THR PHE LYS SEQRES 4 A 142 VAL LEU SER ASP ASP GLY ARG ILE VAL ASN PHE THR ILE SEQRES 5 A 142 ARG PRO GLY THR ASP ALA ILE ILE THR GLY TYR GLY THR SEQRES 6 A 142 TYR ARG GLN ILE SER ALA ALA ALA TYR LYS GLU SER ILE SEQRES 7 A 142 GLU LYS ASN ILE HIS LEU PRO MSE LEU ASP ASN LYS ASP SEQRES 8 A 142 ASN ILE LEU GLU PHE GLU MSE GLY ALA GLY GLY VAL MSE SEQRES 9 A 142 TYR LEU LYS TYR PHE ILE GLU LYS ASP LEU ASN GLY ASN SEQRES 10 A 142 GLU LEU ASN THR TRP PHE HIS GLU THR TRP LYS ARG VAL SEQRES 11 A 142 THR MSE PRO PRO VAL PHE PRO GLU ASP ILE VAL ARG SEQRES 1 B 142 GLY GLN ASP LYS ALA ALA PHE GLU PRO ALA HIS LEU GLN SEQRES 2 B 142 GLY ILE TRP GLN LEU CYS HIS TYR VAL SER GLU ASN PRO SEQRES 3 B 142 ASP ILE PRO GLY VAL LEU LYS PRO SER ASN THR PHE LYS SEQRES 4 B 142 VAL LEU SER ASP ASP GLY ARG ILE VAL ASN PHE THR ILE SEQRES 5 B 142 ARG PRO GLY THR ASP ALA ILE ILE THR GLY TYR GLY THR SEQRES 6 B 142 TYR ARG GLN ILE SER ALA ALA ALA TYR LYS GLU SER ILE SEQRES 7 B 142 GLU LYS ASN ILE HIS LEU PRO MSE LEU ASP ASN LYS ASP SEQRES 8 B 142 ASN ILE LEU GLU PHE GLU MSE GLY ALA GLY GLY VAL MSE SEQRES 9 B 142 TYR LEU LYS TYR PHE ILE GLU LYS ASP LEU ASN GLY ASN SEQRES 10 B 142 GLU LEU ASN THR TRP PHE HIS GLU THR TRP LYS ARG VAL SEQRES 11 B 142 THR MSE PRO PRO VAL PHE PRO GLU ASP ILE VAL ARG MODRES 4I95 MSE A 107 MET SELENOMETHIONINE MODRES 4I95 MSE A 119 MET SELENOMETHIONINE MODRES 4I95 MSE A 125 MET SELENOMETHIONINE MODRES 4I95 MSE A 153 MET SELENOMETHIONINE MODRES 4I95 MSE B 107 MET SELENOMETHIONINE MODRES 4I95 MSE B 119 MET SELENOMETHIONINE MODRES 4I95 MSE B 125 MET SELENOMETHIONINE MODRES 4I95 MSE B 153 MET SELENOMETHIONINE HET MSE A 107 13 HET MSE A 119 8 HET MSE A 125 8 HET MSE A 153 8 HET MSE B 107 8 HET MSE B 119 8 HET MSE B 125 8 HET MSE B 153 8 HET UNL A 200 8 HET UNL B 200 8 HETNAM MSE SELENOMETHIONINE HETNAM UNL UNKNOWN LIGAND FORMUL 1 MSE 8(C5 H11 N O2 SE) FORMUL 5 HOH *293(H2 O) HELIX 1 1 LEU A 105 ASP A 109 5 5 HELIX 2 2 LEU B 105 ASP B 109 5 5 SHEET 1 A 9 GLY A 35 VAL A 43 0 SHEET 2 A 9 VAL A 52 LEU A 62 -1 O THR A 58 N LEU A 39 SHEET 3 A 9 ARG A 67 THR A 72 -1 O PHE A 71 N PHE A 59 SHEET 4 A 9 ILE A 80 SER A 91 -1 O GLY A 83 N ASN A 70 SHEET 5 A 9 ALA A 94 ASN A 102 -1 O SER A 98 N THR A 86 SHEET 6 A 9 LYS A 111 MSE A 119 -1 O LEU A 115 N TYR A 95 SHEET 7 A 9 VAL A 124 LYS A 133 -1 O TYR A 126 N GLU A 118 SHEET 8 A 9 GLU A 139 ARG A 150 -1 O PHE A 144 N TYR A 129 SHEET 9 A 9 GLY A 35 VAL A 43 -1 N CYS A 40 O THR A 147 SHEET 1 B 9 GLY B 35 VAL B 43 0 SHEET 2 B 9 VAL B 52 LEU B 62 -1 O SER B 56 N LEU B 39 SHEET 3 B 9 ARG B 67 THR B 72 -1 O VAL B 69 N VAL B 61 SHEET 4 B 9 ILE B 80 SER B 91 -1 O GLY B 83 N ASN B 70 SHEET 5 B 9 ALA B 94 ASN B 102 -1 O SER B 98 N THR B 86 SHEET 6 B 9 LYS B 111 MSE B 119 -1 O LEU B 115 N TYR B 95 SHEET 7 B 9 VAL B 124 LYS B 133 -1 O LYS B 128 N GLU B 116 SHEET 8 B 9 GLU B 139 ARG B 150 -1 O PHE B 144 N TYR B 129 SHEET 9 B 9 GLY B 35 VAL B 43 -1 N CYS B 40 O THR B 147 LINK C PRO A 106 N MSE A 107 1555 1555 1.34 LINK C MSE A 107 N LEU A 108 1555 1555 1.33 LINK C GLU A 118 N MSE A 119 1555 1555 1.33 LINK C MSE A 119 N GLY A 120 1555 1555 1.33 LINK C VAL A 124 N MSE A 125 1555 1555 1.31 LINK C MSE A 125 N TYR A 126 1555 1555 1.33 LINK C THR A 152 N MSE A 153 1555 1555 1.33 LINK C MSE A 153 N PRO A 154 1555 1555 1.33 LINK C PRO B 106 N MSE B 107 1555 1555 1.34 LINK C MSE B 107 N LEU B 108 1555 1555 1.33 LINK C GLU B 118 N MSE B 119 1555 1555 1.33 LINK C MSE B 119 N GLY B 120 1555 1555 1.33 LINK C VAL B 124 N MSE B 125 1555 1555 1.32 LINK C MSE B 125 N TYR B 126 1555 1555 1.32 LINK C THR B 152 N MSE B 153 1555 1555 1.33 LINK C MSE B 153 N PRO B 154 1555 1555 1.34 CRYST1 103.067 103.067 114.975 90.00 90.00 120.00 P 63 2 2 24 ORIGX1 1.000000 0.000000 0.000000 0.00000 ORIGX2 0.000000 1.000000 0.000000 0.00000 ORIGX3 0.000000 0.000000 1.000000 0.00000 SCALE1 0.009702 0.005602 0.000000 0.00000 SCALE2 0.000000 0.011203 0.000000 0.00000 SCALE3 0.000000 0.000000 0.008698 0.00000